View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1166_high_70 (Length: 251)
Name: NF1166_high_70
Description: NF1166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1166_high_70 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 2655055 - 2655297
Alignment:
| Q |
1 |
gagaatttgaacatcttaatgattctgcaccaaaagcagaaccattcaatgccccttcctcaactaaatatatgtaaataagaaaactcacgaagaaaat |
100 |
Q |
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| T |
2655055 |
gagaatttgaacatcttaattattctgcaccaaaagcagaaccattcaatgccccttcctcaactaaatatatgtaaataagaaaactcacgaagaaaat |
2655154 |
T |
|
| Q |
101 |
aagagaaccatttttcaggaaaatatcaccaaaggaatcaaaactttacca-caaaattttctctatttttcacaacatgatttcatgaatctaaagaca |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2655155 |
aagagaaccatttttcaggaaaatatcaccaaaggaatcaaaactttaccaccaaaattttctctatttttcacaacatgatttcatgaatctaaagaca |
2655254 |
T |
|
| Q |
200 |
agactggttttaccggaatgcttctaagaccattaagaataat |
242 |
Q |
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|||| ||||| |||| ||||||||| ||||||||||||||||| |
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| T |
2655255 |
agaccggtttcaccgcaatgcttctgagaccattaagaataat |
2655297 |
T |
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