View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1166_low_63 (Length: 277)
Name: NF1166_low_63
Description: NF1166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1166_low_63 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 8881292 - 8881099
Alignment:
| Q |
1 |
caaattagttcatttcacttgattcagtatatcatatcttgccaagatagaactactttcatatttgaaaattattgctgtgaaatttttaactttgtca |
100 |
Q |
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| T |
8881292 |
caaattagttcatttcacttgattcagtatatcatatcttgccaagatagaactactttcatatttgaaaattattgctgtgaaatttttaactttgtca |
8881193 |
T |
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| Q |
101 |
aagatataggaataagaaaaatactactagaaagaaaacctatacctagctagaaatgaatggtcggcattcccaatggatatgtttgtgtaat |
194 |
Q |
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| T |
8881192 |
aagatataggaataagaaaaatactacaagaaagaaaacctatacctagctagaaatgaatggtcggcattcccaatggatatgtttgtgtaat |
8881099 |
T |
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