View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11671_low_11 (Length: 400)

Name: NF11671_low_11
Description: NF11671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11671_low_11
NF11671_low_11
[»] chr2 (40 HSPs)
chr2 (1-381)||(33580299-33580681)
chr2 (24-143)||(43529776-43529895)
chr2 (32-178)||(18179166-18179312)
chr2 (49-143)||(18884900-18884994)
chr2 (35-122)||(43985263-43985350)
chr2 (33-143)||(44606037-44606147)
chr2 (90-135)||(787373-787418)
chr2 (36-178)||(5759505-5759647)
chr2 (90-140)||(1494430-1494480)
chr2 (25-143)||(9595291-9595409)
chr2 (90-143)||(1647269-1647322)
chr2 (88-140)||(680539-680591)
chr2 (90-178)||(9556237-9556325)
chr2 (90-142)||(33256774-33256826)
chr2 (36-106)||(36677722-36677793)
chr2 (37-112)||(40943977-40944052)
chr2 (24-122)||(1318290-1318387)
chr2 (90-140)||(4350726-4350776)
chr2 (85-143)||(5133805-5133863)
chr2 (48-154)||(13234528-13234634)
chr2 (96-178)||(32821807-32821889)
chr2 (90-172)||(33192206-33192288)
chr2 (93-175)||(44438826-44438908)
chr2 (90-143)||(10285893-10285946)
chr2 (51-140)||(10567093-10567182)
chr2 (90-143)||(12313157-12313210)
chr2 (90-127)||(29430807-29430844)
chr2 (90-143)||(32106783-32106836)
chr2 (90-143)||(33941942-33941995)
chr2 (90-143)||(35379000-35379053)
chr2 (35-119)||(37276803-37276885)
chr2 (90-122)||(1801722-1801754)
chr2 (90-130)||(5902533-5902573)
chr2 (103-139)||(10285392-10285428)
chr2 (90-178)||(12215805-12215893)
chr2 (93-137)||(14451037-14451081)
chr2 (90-122)||(14844998-14845030)
chr2 (91-123)||(16398456-16398488)
chr2 (36-143)||(17775396-17775503)
chr2 (90-122)||(37518842-37518874)
[»] chr7 (26 HSPs)
chr7 (32-169)||(28691762-28691898)
chr7 (59-178)||(20553101-20553220)
chr7 (24-142)||(30535597-30535715)
chr7 (37-137)||(33894666-33894766)
chr7 (65-178)||(44615063-44615176)
chr7 (33-86)||(19624267-19624320)
chr7 (90-143)||(43219628-43219681)
chr7 (90-143)||(44808191-44808244)
chr7 (90-143)||(46082069-46082122)
chr7 (90-178)||(12110358-12110446)
chr7 (88-136)||(12834944-12834992)
chr7 (96-176)||(39345471-39345551)
chr7 (90-144)||(15740539-15740594)
chr7 (35-178)||(48157049-48157192)
chr7 (90-144)||(15740395-15740449)
chr7 (95-177)||(25130078-25130160)
chr7 (90-176)||(39334193-39334279)
chr7 (96-138)||(39539771-39539813)
chr7 (94-143)||(5628555-5628603)
chr7 (90-143)||(11048060-11048113)
chr7 (90-123)||(43219788-43219821)
chr7 (90-143)||(43250683-43250736)
chr7 (32-140)||(13960650-13960757)
chr7 (90-122)||(28340404-28340436)
chr7 (100-144)||(44990316-44990360)
chr7 (95-143)||(47134746-47134794)
[»] chr6 (33 HSPs)
chr6 (90-178)||(31624088-31624176)
chr6 (32-177)||(32171309-32171454)
chr6 (38-122)||(27857412-27857496)
chr6 (90-137)||(2027390-2027437)
chr6 (32-122)||(8146992-8147082)
chr6 (33-143)||(34939777-34939887)
chr6 (90-143)||(696635-696688)
chr6 (96-129)||(3738116-3738149)
chr6 (90-143)||(28641733-28641786)
chr6 (24-80)||(7351589-7351645)
chr6 (90-144)||(1575782-1575837)
chr6 (59-130)||(1669751-1669822)
chr6 (90-137)||(2034430-2034477)
chr6 (51-142)||(11600819-11600910)
chr6 (93-144)||(17770601-17770652)
chr6 (32-178)||(281774-281920)
chr6 (90-144)||(1575927-1575981)
chr6 (32-122)||(3525178-3525268)
chr6 (33-143)||(7148699-7148809)
chr6 (90-176)||(20368164-20368250)
chr6 (90-123)||(696495-696528)
chr6 (32-129)||(2456989-2457085)
chr6 (93-178)||(4006712-4006797)
chr6 (75-176)||(8183145-8183246)
chr6 (38-143)||(8420129-8420234)
chr6 (102-143)||(9027611-9027652)
chr6 (90-178)||(9093539-9093628)
chr6 (90-143)||(10616697-10616750)
chr6 (65-122)||(32917251-32917308)
chr6 (90-143)||(34404709-34404762)
chr6 (90-146)||(1810289-1810345)
chr6 (90-122)||(31338030-31338062)
chr6 (90-142)||(32577970-32578022)
[»] chr5 (29 HSPs)
chr5 (96-176)||(41957441-41957521)
chr5 (64-143)||(11700336-11700415)
chr5 (19-143)||(11297109-11297233)
chr5 (33-137)||(11457138-11457241)
chr5 (95-143)||(14331400-14331448)
chr5 (91-143)||(17258868-17258920)
chr5 (88-178)||(16889733-16889823)
chr5 (90-175)||(3977309-3977394)
chr5 (32-109)||(5377123-5377200)
chr5 (90-143)||(13604833-13604886)
chr5 (25-138)||(14733808-14733921)
chr5 (90-139)||(21768181-21768230)
chr5 (32-143)||(499657-499768)
chr5 (56-143)||(4619740-4619827)
chr5 (96-143)||(8177522-8177569)
chr5 (32-119)||(25079494-25079580)
chr5 (32-119)||(25137463-25137549)
chr5 (90-143)||(2569679-2569732)
chr5 (90-143)||(3280698-3280751)
chr5 (59-120)||(10152390-10152451)
chr5 (95-140)||(15406001-15406046)
chr5 (96-137)||(17369429-17369470)
chr5 (90-143)||(37611199-37611252)
chr5 (90-143)||(37787929-37787982)
chr5 (90-178)||(39105462-39105551)
chr5 (95-143)||(1899187-1899235)
chr5 (24-80)||(10791090-10791146)
chr5 (90-130)||(14295552-14295592)
chr5 (31-143)||(18853044-18853156)
[»] chr3 (31 HSPs)
chr3 (64-176)||(24624210-24624322)
chr3 (18-143)||(45541604-45541729)
chr3 (96-176)||(1217790-1217870)
chr3 (35-129)||(36646311-36646405)
chr3 (90-143)||(5391912-5391965)
chr3 (90-137)||(27290885-27290932)
chr3 (73-143)||(21574523-21574593)
chr3 (92-134)||(30750042-30750084)
chr3 (90-176)||(39602194-39602280)
chr3 (37-143)||(43115089-43115195)
chr3 (32-129)||(20192532-20192629)
chr3 (90-143)||(34254792-34254845)
chr3 (94-143)||(36101601-36101650)
chr3 (94-143)||(36139911-36139960)
chr3 (90-143)||(39723224-39723277)
chr3 (69-138)||(53762357-53762426)
chr3 (91-143)||(16790364-16790415)
chr3 (90-176)||(21367667-21367754)
chr3 (106-177)||(22214659-22214730)
chr3 (90-176)||(3015827-3015913)
chr3 (100-142)||(26599193-26599235)
chr3 (91-137)||(30923883-30923929)
chr3 (65-143)||(47513686-47513764)
chr3 (90-123)||(39723384-39723417)
chr3 (90-178)||(41724209-41724298)
chr3 (90-143)||(48048966-48049019)
chr3 (45-137)||(50004691-50004784)
chr3 (90-143)||(53952081-53952134)
chr3 (91-143)||(11040599-11040651)
chr3 (59-143)||(37273167-37273251)
chr3 (104-140)||(51130786-51130822)
[»] chr1 (31 HSPs)
chr1 (32-143)||(6292526-6292636)
chr1 (90-143)||(11639400-11639453)
chr1 (96-143)||(26184781-26184828)
chr1 (37-178)||(31517671-31517812)
chr1 (49-118)||(34536216-34536285)
chr1 (24-140)||(4622129-4622245)
chr1 (93-177)||(10744300-10744384)
chr1 (32-176)||(27140478-27140622)
chr1 (90-178)||(44422697-44422785)
chr1 (32-143)||(4868433-4868543)
chr1 (32-143)||(10199334-10199445)
chr1 (45-116)||(12763383-12763454)
chr1 (96-143)||(28689442-28689489)
chr1 (25-143)||(10439719-10439837)
chr1 (39-129)||(32515374-32515464)
chr1 (90-143)||(35925723-35925776)
chr1 (95-139)||(4202140-4202184)
chr1 (91-143)||(11695894-11695946)
chr1 (89-169)||(24460390-24460470)
chr1 (90-178)||(25479579-25479667)
chr1 (90-178)||(29045896-29045984)
chr1 (31-139)||(38170615-38170723)
chr1 (90-142)||(39270409-39270461)
chr1 (98-141)||(1565527-1565570)
chr1 (92-143)||(37593670-37593721)
chr1 (92-142)||(12477273-12477323)
chr1 (25-123)||(27807168-27807266)
chr1 (94-139)||(10854770-10854815)
chr1 (37-130)||(15581300-15581393)
chr1 (90-130)||(17628645-17628685)
chr1 (103-143)||(21002193-21002233)
[»] chr8 (31 HSPs)
chr8 (65-169)||(38307669-38307773)
chr8 (65-176)||(11569416-11569527)
chr8 (37-143)||(30191072-30191178)
chr8 (100-178)||(31705083-31705161)
chr8 (90-178)||(11183543-11183631)
chr8 (90-169)||(12851183-12851262)
chr8 (91-178)||(30389097-30389184)
chr8 (100-178)||(37353243-37353321)
chr8 (68-137)||(14949905-14949974)
chr8 (32-176)||(26410279-26410424)
chr8 (90-174)||(26473736-26473820)
chr8 (90-122)||(29168649-29168681)
chr8 (94-137)||(3254264-3254307)
chr8 (32-143)||(6950355-6950466)
chr8 (68-143)||(12972891-12972966)
chr8 (32-107)||(26499785-26499860)
chr8 (92-143)||(42215292-42215343)
chr8 (90-176)||(11415154-11415240)
chr8 (101-143)||(20672783-20672825)
chr8 (32-178)||(39551135-39551281)
chr8 (32-113)||(2487934-2488015)
chr8 (19-76)||(7008698-7008755)
chr8 (90-143)||(9835884-9835937)
chr8 (90-143)||(10383918-10383971)
chr8 (90-143)||(13459678-13459731)
chr8 (95-176)||(30277234-30277315)
chr8 (34-119)||(37740355-37740440)
chr8 (32-80)||(3634610-3634658)
chr8 (90-178)||(8062327-8062415)
chr8 (103-143)||(9700034-9700074)
chr8 (90-178)||(40071747-40071835)
[»] chr4 (16 HSPs)
chr4 (25-120)||(6428074-6428169)
chr4 (48-142)||(2996607-2996701)
chr4 (32-129)||(7367980-7368077)
chr4 (90-137)||(52754638-52754685)
chr4 (34-137)||(32071907-32072005)
chr4 (66-142)||(21043195-21043271)
chr4 (96-143)||(29467614-29467661)
chr4 (100-130)||(3646673-3646703)
chr4 (33-143)||(33534096-33534206)
chr4 (90-143)||(1137745-1137798)
chr4 (102-143)||(6978958-6978999)
chr4 (94-143)||(8468981-8469030)
chr4 (32-108)||(18628479-18628555)
chr4 (99-143)||(21592999-21593043)
chr4 (90-130)||(27970104-27970144)
chr4 (32-120)||(28615391-28615478)
[»] scaffold0072 (1 HSPs)
scaffold0072 (90-137)||(4998-5045)
[»] scaffold0003 (1 HSPs)
scaffold0003 (90-169)||(306333-306412)


Alignment Details
Target: chr2 (Bit Score: 340; Significance: 0; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 33580681 - 33580299
Alignment:
Q  1 agagacttgctcaggtaaa--gagactgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaa 98  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33580681 agagacttgctcaggtaaaaagagactgtttcaactgacttatttaagtttatctattgacatacgcacgtgtaagactgttctggagggattatgaaaa 33580582  T
Q  99 cagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagcggacatgaaacaattatgtc 198  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  33580581 cagcttatgacatatccataagctgctttcagattattttcataatatatcaaggacatcttgtgaaaacagcttatagctgacatgaaacaattatgtc 33580482  T
Q  199 atgactctttactgtttagttaagatgcttatctagagaggggcaaatagcaataacactcatggaatgtgattctgaaaagtgcatgaatcattggaag 298  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33580481 atgactctttactgtttagttcagatgcttatctagacaggggcaaatagcaataacactcatggaatgtgattctgaaaagtgcatgaatcattggaag 33580382  T
Q  299 tatcttcatttctcatgtatagttgtttgttttcaaatgtaggttgtgagtgatccaagcctaacaaaatctggtgtttactg 381  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33580381 tatcttcatttctcatgtatggttgtttgttttcaaatgtaggttgtgagtgatccaagcctaacaaaatctggtgtttactg 33580299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 43529776 - 43529895
Alignment:
Q  24 ctgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctg 123  Q
    |||||| ||||||||||||| || ||||||||||  ||| |||||| | | ||||||  ||||   |||||||||||||||||| ||||| ||||||||     
T  43529776 ctgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataagcta 43529875  T
Q  124 ctttcagattattttcataa 143  Q
     |||||| ||||||||||||    
T  43529876 ttttcagtttattttcataa 43529895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 18179166 - 18179312
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||| |||||||||| ||||||| | ||||| |||||||||||  ||||  | || | ||||||||||| |||| ||||||||||| ||||  ||||||     
T  18179166 attggcttatttaagcttatctagttacataagcacttgtaagtttgtttggaagtgtttatgaaaacatcttaagacatgtccattagctattttcagc 18179265  T
Q  132 ttattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||||| |||  | || |||| ||||| ||||| |||||||||||    
T  18179266 ttattttcgtaagttctccaggatagcttatgaaagcagcttatagc 18179312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 18884994 - 18884900
Alignment:
Q  49 tatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||| | ||||||||| |||||  |||| | ||||  |||||||||||||||| ||||| ||||| ||||||||||||| |||||    
T  18884994 tatctattgacataagaacttgtaaggctgtttgggagagcttatagaaacagcttatgacatttccattagctgttttcagattatttccataa 18884900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 43985350 - 43985263
Alignment:
Q  35 gacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagct 122  Q
    |||||||||||||||||||| |||||||  ||||||||| ||||||   ||| |||||   ||||| |||||||||||||||||||||    
T  43985350 gacttatttaagtttatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagct 43985263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 44606037 - 44606147
Alignment:
Q  33 ttgacttatttaagtttatctattgacatacgcacttgtaagactgttctggaggga-ttatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    ||||||||||| ||| | | |||||||||| | ||||||| ||||||| |||| | | ||||||||||| ||||||||||||||||||| || ||||||     
T  44606037 ttgacttatttgagtgtttatattgacataagtacttgtacgactgtt-tggaagaacttatgaaaacaacttatgacatgtccataagttgttttcagc 44606135  T
Q  132 ttattttcataa 143  Q
    | ||||||||||    
T  44606136 tgattttcataa 44606147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 787418 - 787373
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattat 135  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  787418 ttatgaaaacagcttatgacatgtccataagctgttttcagcttat 787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 178
Target Start/End: Original strand, 5759505 - 5759647
Alignment:
Q  36 acttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctg-ctttcagatta 134  Q
    |||||||| |||||||||||||  ||| | |||||| ||||||||  |||| | ||||| |||||||||| |||||||||||||| ||  |||||| |||    
T  5759505 acttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccataagttgtgtttcagctta 5759603  T
Q  135 ttttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||| ||    || || | ||||| |||||||||||||||||    
T  5759604 ttttcacaaaccctccagaatagcttatgaaaacagcttatagc 5759647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 1494430 - 1494480
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttca 140  Q
    |||||||||||||||||||||||||||||| ||| ||| || |||||||||    
T  1494430 ttatgaaaacagcttatgacatgtccataaactgtttttagcttattttca 1494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 9595409 - 9595291
Alignment:
Q  25 tgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgc 124  Q
    ||||| |||||| |||||| |||||||||  ||||||   ||||||||||||  ||  | || | ||||||||||| |||||||||||||||| | ||      
T  9595409 tgtttgaattgatttatttgagtttatctgctgacattgtcacttgtaagaccatttagaagagtttatgaaaacatcttatgacatgtccatgaactat 9595310  T
Q  125 tttcagattattttcataa 143  Q
    |||||| ||||||||||||    
T  9595309 tttcagcttattttcataa 9595291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 1647322 - 1647269
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||||  ||||||||| |||||| |||||| |||||    
T  1647322 ttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataa 1647269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 680591 - 680539
Alignment:
Q  88 gattatgaaaacagcttatgacatgtccataagctgctttcagattattttca 140  Q
    ||||||||||||||||||||||||||  |||| ||| |||||| |||||||||    
T  680591 gattatgaaaacagcttatgacatgtttataaactgttttcagcttattttca 680539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 9556325 - 9556237
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||||||||| || ||||||||||||||||  | |||||  ||||||||||||  | || |||| ||||| ||||||||| |||||||    
T  9556325 ttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggatagcttatgaaaacagtttatagc 9556237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 33256826 - 33256774
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcata 142  Q
    |||||||||||||||||||||||| ||||| ||| | |||| |||||||||||    
T  33256826 ttatgaaaacagcttatgacatgttcataaactgttctcagcttattttcata 33256774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 36677793 - 36677722
Alignment:
Q  36 acttatttaagtttatctatt-gacatacgcacttgtaagactgttctggagggattatgaaaacagcttat 106  Q
    |||||||| |||||||||||| |||||| |||||||| ||||| |||  ||| | |||||||||||||||||    
T  36677793 acttatttgagtttatctatttgacataagcacttgtgagactattcaagagagcttatgaaaacagcttat 36677722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 40944052 - 40943977
Alignment:
Q  37 cttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatg 112  Q
    ||||||| |||||||||| ||||||| |||||||| | ||||||  | |  | |||||||||||||||||||||||    
T  40944052 cttatttgagtttatctaatgacataagcacttgtgaaactgtttggaaaagtttatgaaaacagcttatgacatg 40943977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 1318387 - 1318290
Alignment:
Q  24 ctgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagct 122  Q
    |||||| |||||| | |||| || ||||||| || |||| |||||||| ||||||||   ||| | ||||||||||| ||||||||||||||| |||||    
T  1318387 ctgtttgaattgagtaatttgagattatctactg-cataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtccagaagct 1318290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 4350776 - 4350726
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttca 140  Q
    |||||||||||||||||||||||| ||||| ||| ||| || |||||||||    
T  4350776 ttatgaaaacagcttatgacatgttcataaactgattttaggttattttca 4350726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 5133863 - 5133805
Alignment:
Q  85 agggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||| |||||| |||||||||||  |||||||| ||||||| |||||| |||||    
T  5133863 agggattataaaaacaacttatgacatggtcataagctactttcagcttatttccataa 5133805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 13234634 - 13234528
Alignment:
Q  48 ttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatata 147  Q
    ||||| |||| |||| |||||||||||||||||   ||| | |||  ||||||  |||||||||||||||||| || |||||  |||| |||||||  ||    
T  13234634 ttatcaattggcataagcacttgtaagactgtttgagagtgcttacaaaaacacattatgacatgtccataagttgttttcaacttatcttcataagcta 13234535  T
Q  148 tcaagga 154  Q
    |||||||    
T  13234534 tcaagga 13234528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 32821889 - 32821807
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||| |||||||||||||||||||||| |||||| ||||||  ||||  | |  |||| ||||| ||||||||| |||||||    
T  32821889 aaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtttatagc 32821807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 33192288 - 33192206
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagct 172  Q
    |||||||||||| ||||||||| ||||||||||| |||||| |||| || ||||  | || |||| ||||| ||||| |||||    
T  33192288 ttatgaaaacagtttatgacatatccataagctgttttcagcttatatttataagctctccaggatagcttatgaaaccagct 33192206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 44438826 - 44438908
Alignment:
Q  93 tgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttat 175  Q
    ||||||||||||||||||||| ||||| ||| |||||| |||||| || || || || |||| | ||| |||| |||||||||    
T  44438826 tgaaaacagcttatgacatgttcataacctgttttcagcttatttccacaagatctccaggataacttatgaagacagcttat 44438908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 10285946 - 10285893
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||| | |||||||||||||||||||||| |||||  |||||| |||||    
T  10285946 ttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataa 10285893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 10567182 - 10567093
Alignment:
Q  51 tctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttca 140  Q
    |||||||||||| | ||| || ||||||||  |||| |||| || |||||||||||||||||  |||||| || |||||| | |||||||    
T  10567182 tctattgacataagtactcgtgagactgtttgggagagattgtggaaacagcttatgacatgatcataagttgttttcagctaattttca 10567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 12313157 - 12313210
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||| ||||| |||||| || |||||  ||||||||||||    
T  12313157 ttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataa 12313210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 29430844 - 29430807
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgcttt 127  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  29430844 ttatgaaaatagcttatgacatgtccattagctgcttt 29430807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 32106783 - 32106836
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||| ||  ||||||| ||||| ||||| |||||||    
T  32106783 ttatgaaaacagcttatgacatatctgtaagctgttttcaaattatgttcataa 32106836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 33941995 - 33941942
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||| ||||||||| || |||||||||||||||  ||||| ||||||    
T  33941995 ttatgaaaacaacttatgacaagttcataagctgctttcaacttattatcataa 33941942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 35379000 - 35379053
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||| ||||| ||| |||||| || |||||| ||||||||||||    
T  35379000 ttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataa 35379053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 37276885 - 37276803
Alignment:
Q  35 gacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataa 119  Q
    |||||||||||||||||||| | | ||| |||||||| ||||||||  ||||||  |||  ||| |||||||||||||| |||||    
T  37276885 gacttatttaagtttatctactaatataagcacttgtgagactgtttgggaggg--tatagaaatagcttatgacatgttcataa 37276803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 1801754 - 1801722
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagct 122  Q
    |||||||||||||||||||||||| ||||||||    
T  1801754 ttatgaaaacagcttatgacatgttcataagct 1801722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 5902533 - 5902573
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcag 130  Q
    |||||||||||||||||||||||| ||||| ||| ||||||    
T  5902533 ttatgaaaacagcttatgacatgttcataaactgttttcag 5902573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 10285428 - 10285392
Alignment:
Q  103 ttatgacatgtccataagctgctttcagattattttc 139  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  10285428 ttatgacatgtccataagctgttttcagcttattttc 10285392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 12215893 - 12215805
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||| ||| |||||||||||||||||||||||| |||||   ||||  |||||  | |||||||  |||| | |||||||||||||||    
T  12215893 ttatggaaatagcttatgacatgtccataagctgttttcaccatattcccataagctctcaaggatggcttataaaaacagcttatagc 12215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 14451037 - 14451081
Alignment:
Q  93 tgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    |||||||| ||||||||||| |||||||||| |||||| ||||||    
T  14451037 tgaaaacaacttatgacatgaccataagctgttttcagcttattt 14451081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 14844998 - 14845030
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagct 122  Q
    |||||||||||||||||||||||||| ||||||    
T  14844998 ttatgaaaacagcttatgacatgtccgtaagct 14845030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 16398456 - 16398488
Alignment:
Q  91 tatgaaaacagcttatgacatgtccataagctg 123  Q
    |||||||||| ||||||||||||||||||||||    
T  16398456 tatgaaaacaacttatgacatgtccataagctg 16398488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 17775396 - 17775503
Alignment:
Q  36 acttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacag-cttatgacatgtccataagctgctttcagatta 134  Q
    |||||||| ||  |||||| ||||||| || ||| ||||||||||   ||||| ||||||||||||  ||||||||| | | ||||||| |||||| |||    
T  17775396 acttatttgagcatatctactgacataagctcttttaagactgtttgagagggtttatgaaaacagttttatgacat-ttcttaagctgttttcagctta 17775494  T
Q  135 ttttcataa 143  Q
    |||||||||    
T  17775495 ttttcataa 17775503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 37518842 - 37518874
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagct 122  Q
    ||||||||||||||||||| |||||||||||||    
T  37518842 ttatgaaaacagcttatgaaatgtccataagct 37518874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 28691762 - 28691898
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||||||||||| |||||||||  | ||||| ||| |||| ||||||||| ||||   |||||||||||||||||||| |||||||||  || | ||||     
T  28691762 attgacttatttgagtttatctgctaacataagcatttgtgagactgttc-ggagatcttatgaaaacagcttatgacttgtccataaattgttatcagt 28691860  T
Q  132 ttattttcataatatatcaaggacagcttgtgaaaaca 169  Q
    |||||||||||| || || |||| ||||| ||||||||    
T  28691861 ttattttcataagatctccaggatagcttatgaaaaca 28691898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 20553220 - 20553101
Alignment:
Q  59 catacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagc 158  Q
    |||| |||||||| ||||||||| |||| | ||||| |||||||||| ||||||| |||||| || ||||||||||||| |||||  |  | |||| | |    
T  20553220 cataagcacttgtgagactgttcaggagagcttatggaaacagcttacgacatgttcataagttgttttcagattatttccataagctcactaggataac 20553121  T
Q  159 ttgtgaaaacagcttatagc 178  Q
    ||||||||||| ||||||||    
T  20553120 ttgtgaaaacaacttatagc 20553101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 30535715 - 30535597
Alignment:
Q  24 ctgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctg 123  Q
    |||||| ||||||||||||| |||| || || |||||||  ||||||  |||||||| |||||   ||||||||||| ||||||| |||| | |||||||    
T  30535715 ctgtttgaattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttatgatatgttcgtaagctg 30535616  T
Q  124 ctttcagattattttcata 142  Q
     |||||| |||||||||||    
T  30535615 ttttcaggttattttcata 30535597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 33894766 - 33894666
Alignment:
Q  37 cttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattatt 136  Q
    ||||||| || ||||| | ||||||| |||||||| ||||||||   ||| | ||||||||||||| ||||||||||||||||| || |||||| |||||    
T  33894766 cttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatt 33894667  T
Q  137 t 137  Q
    |    
T  33894666 t 33894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 178
Target Start/End: Original strand, 44615063 - 44615176
Alignment:
Q  65 cacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtga 164  Q
    |||||| || ||||||| |||| | ||||||||||| ||||||||||||||| |||||| |||||  |||||| |||||  | ||||||  | ||| |||    
T  44615063 cacttgcaaaactgttcaggagagcttatgaaaacaacttatgacatgtccacaagctgttttcacgttatttccataaactctcaaggctaacttatga 44615162  T
Q  165 aaacagcttatagc 178  Q
    |||||| |||||||    
T  44615163 aaacagtttatagc 44615176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 19624320 - 19624267
Alignment:
Q  33 ttgacttatttaagtttatctattgacatacgcacttgtaagactgttctggag 86  Q
    ||||||||||| |||||||||||||||||| |||||||| | ||||||| ||||    
T  19624320 ttgacttatttgagtttatctattgacataagcacttgtgaaactgttcgggag 19624267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 43219628 - 43219681
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||| ||||||||||||||||||| ||||||||| |||||| ||||| ||||||    
T  43219628 ttatcaaaacagcttatgacatgttcataagctgttttcagcttattctcataa 43219681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 44808244 - 44808191
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||| | |||||||||||||||||| ||| |||||| ||||||||||||    
T  44808244 ttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataa 44808191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 46082122 - 46082069
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||| ||||||||||| ||||||| || |||||| ||||||||||||    
T  46082122 ttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataa 46082069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 12110446 - 12110358
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||||||||| |||||||||||| || || ||| ||| |||||||||||||||  | |  | || ||||| |||||||||||||||||    
T  12110446 ttatgaaaacaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagc 12110358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 12834944 - 12834992
Alignment:
Q  88 gattatgaaaacagcttatgacatgtccataagctgctttcagattatt 136  Q
    ||||||| |||||||||||||||||||||||| ||| |||||| |||||    
T  12834944 gattatggaaacagcttatgacatgtccataaactgttttcagcttatt 12834992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 39345551 - 39345471
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    |||||| |||||||||||||||||| ||||||||| |||||| |||||  |    |||| ||||| |||||||||||||||    
T  39345551 aaacagtttatgacatgtccataagttgctttcagcttatttccataaggtcgtcaggatagcttttgaaaacagcttata 39345471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 15740539 - 15740594
Alignment:
Q  90 ttatgaaaacagcttatga-catgtccataagctgctttcagattattttcataat 144  Q
    ||||||||||||||||||| |||||||||||| || |||||  |||||||||||||    
T  15740539 ttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttcataat 15740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 178
Target Start/End: Original strand, 48157049 - 48157192
Alignment:
Q  35 gacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagatta 134  Q
    ||||||||| || |||| || |||  || ||| |||| ||||||||  |||| | ||||  ||||| |||||| ||||||||||||||| |||||| |||    
T  48157049 gacttatttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagctta 48157148  T
Q  135 ttttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||| ||||| || ||  | | ||||||||||||||  |||||||    
T  48157149 tttccataagatctcccgaatagcttgtgaaaacaaattatagc 48157192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 15740395 - 15740449
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataat 144  Q
    ||||||||||| |||||||||||| ||||||||| ||| |  |||||||||||||    
T  15740395 ttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataat 15740449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 25130078 - 25130160
Alignment:
Q  95 aaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatag 177  Q
    ||||||| ||||||||||| ||||||||| ||||||  |||||||| ||  | || | || ||||| ||||||||||||||||    
T  25130078 aaaacagtttatgacatgttcataagctgttttcagcatattttcagaaattttccaagatagcttttgaaaacagcttatag 25130160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 39334279 - 39334193
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    ||||| |||||  |||||||||||||||||| ||| ||||| |||||| |||||  |  | |||| ||||| |||||||||||||||    
T  39334279 ttatggaaacaatttatgacatgtccataagttgcattcagcttatttccataagctcgccaggatagcttttgaaaacagcttata 39334193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 39539771 - 39539813
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattatttt 138  Q
    ||||| |||||||||||||||||||||| |||||| |||||||    
T  39539771 aaacaacttatgacatgtccataagctgttttcagcttatttt 39539813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 5628555 - 5628603
Alignment:
Q  94 gaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||| |||||||||||| |||||||| |||||| ||||||||||||    
T  5628555 gaaaacagtttatgacatgtctataagctg-tttcagcttattttcataa 5628603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 11048113 - 11048060
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||| |||||| |||||||||||| ||||||||| |||||| ||||| ||||||    
T  11048113 ttatcaaaacaacttatgacatgttcataagctgttttcagcttattctcataa 11048060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 43219788 - 43219821
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctg 123  Q
    |||||||||||||||||||||||| |||||||||    
T  43219788 ttatgaaaacagcttatgacatgttcataagctg 43219821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 43250683 - 43250736
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||||| | |||| || |||||| |||| |||||||    
T  43250683 ttatgaaaacagcttatgacatgttcgtaagttgttttcagtttatattcataa 43250736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 13960650 - 13960757
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||||||||||| || ||||| |||| |||| |||||||  ||||| ||   ||| | ||||||||||||||||| ||| |||||||||||   |||||     
T  13960650 attgacttatttgagcttatccattg-cataagcacttgcgagactatttgagagagcttatgaaaacagcttataacaagtccataagctatgttcagc 13960748  T
Q  132 ttattttca 140  Q
    |||||||||    
T  13960749 ttattttca 13960757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 28340404 - 28340436
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagct 122  Q
    ||||||||||| |||||||||||||||||||||    
T  28340404 ttatgaaaacaacttatgacatgtccataagct 28340436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 44990316 - 44990360
Alignment:
Q  100 agcttatgacatgtccataagctgctttcagattattttcataat 144  Q
    ||||||||||| ||||||||| ||||||||  |||||||||||||    
T  44990316 agcttatgacaggtccataagttgctttcaacttattttcataat 44990360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 47134746 - 47134794
Alignment:
Q  95 aaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||| ||||||||| ||||||||| || |||||| ||||||||||||    
T  47134746 aaaacaacttatgacacgtccataagttgttttcagcttattttcataa 47134794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 31624176 - 31624088
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||||||||||||||||||||| ||||||||| |||||  ||||||||||||| | || | || ||| | |||||||||||||||||    
T  31624176 ttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagc 31624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 32171309 - 32171454
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||| ||||||| || |||  |||||||||| |||||||  ||||||||   ||| | ||||||||||||||||||||| ||||| |||||  ||||||     
T  32171309 attgtcttatttcagcttaagtattgacataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagc 32171408  T
Q  132 ttattttcataatatatcaaggacagcttgtgaaaacagcttatag 177  Q
    |||||| |||||  |||| |||| | ||  ||||||||||| ||||    
T  32171409 ttatttccataagctatccaggataactaatgaaaacagctcatag 32171454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 27857496 - 27857412
Alignment:
Q  38 ttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagct 122  Q
    |||||| |||||||||| |||||||  ||||||| | ||||||  |||| | ||||||||||| |||||||||| ||||||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataagct 27857412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 2027390 - 2027437
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  2027390 ttatgaaaacagcttatgacatttccataagctgttttcagcttattt 2027437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 8146992 - 8147082
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagct 122  Q
    ||||||||||||||||||| |||||||||||  ||||||| ||||||||    || | ||||||||||| ||||| |||| | ||||||||    
T  8146992 attgacttatttaagtttacctattgacataaccacttgttagactgtttcaaagagcttatgaaaacaacttataacatatgcataagct 8147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 34939887 - 34939777
Alignment:
Q  33 ttgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagat 132  Q
    ||||| ||||| || ||||||| |||||||  || |||| | |||||| ||||| | ||| | ||||||||||||||||||||||||  || |||||| |    
T  34939887 ttgacgtatttcagcttatctagtgacataaacatttgtgaaactgttttggagagcttacggaaacagcttatgacatgtccataaattgttttcagct 34939788  T
Q  133 tattttcataa 143  Q
    ||||| |||||    
T  34939787 tatttccataa 34939777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 696688 - 696635
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||| ||||||||||||||||||| ||||||||| |||||| ||||| ||||||    
T  696688 ttatcaaaacagcttatgacatgttcataagctgttttcagcttattctcataa 696635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 3738149 - 3738116
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttca 129  Q
    ||||||||||||||||||||||||||||||||||    
T  3738149 aaacagcttatgacatgtccataagctgctttca 3738116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 28641733 - 28641786
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||||||| |||||| ||||||||| ||| || ||||||||||||    
T  28641733 ttatgaaaacagcttataacatgttcataagctgtttttagcttattttcataa 28641786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 7351589 - 7351645
Alignment:
Q  24 ctgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgtt 80  Q
    |||||| ||||||||||||| |||||||||| ||||||| |||||||| ||| ||||    
T  7351589 ctgtttaaattgacttatttgagtttatctactgacataagcacttgtgagattgtt 7351645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 1575837 - 1575782
Alignment:
Q  90 ttatgaaaacagcttatga-catgtccataagctgctttcagattattttcataat 144  Q
    ||||||||||||||||||| |||||||||||| || |||||  |||||||||||||    
T  1575837 ttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttcataat 1575782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 1669751 - 1669822
Alignment:
Q  59 catacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcag 130  Q
    |||| ||||||||||||||  |  |||| | ||||||||||| ||||||||||||| |||||||| ||||||    
T  1669751 catatgcacttgtaagactaattgggagagcttatgaaaacaacttatgacatgtctataagctgttttcag 1669822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 2034430 - 2034477
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    ||||| |||||||||||||||| ||||||||||| |||||| ||||||    
T  2034430 ttatggaaacagcttatgacatttccataagctgttttcagcttattt 2034477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 11600819 - 11600910
Alignment:
Q  51 tctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcata 142  Q
    |||| |||||||  ||||||| || ||||| || || | || |||||||||||||||||||||||| || ||  |||||| |||||||||||    
T  11600819 tctactgacataaacacttgtgaggctgttttgtagagtttttgaaaacagcttatgacatgtccaaaaactattttcagcttattttcata 11600910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 17770601 - 17770652
Alignment:
Q  93 tgaaaacagcttatgacatgtccataagctgctttcagattattttcataat 144  Q
    ||||||||||||||||||||| |||||| ||||||||  ||||||| |||||    
T  17770601 tgaaaacagcttatgacatgttcataaggtgctttcaacttatttttataat 17770652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 281774 - 281920
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    ||||||||| || || |||| || ||||||| | |||||| ||||||||  |||| | | ||| || || ||||||||||||| ||||| || ||||||     
T  281774 attgacttacttgagattatgtagtgacataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagc 281873  T
Q  132 ttattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||| ||| |  | || |||| ||||| |||| ||||||||||||    
T  281874 ttatttccatgagctctctaggatagcttatgaacacagcttatagc 281920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 1575981 - 1575927
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataat 144  Q
    ||||||||||| |||||||||||| ||||||||| ||| |  |||||||||||||    
T  1575981 ttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataat 1575927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 3525268 - 3525178
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagct 122  Q
    ||||||| ||||||||||||||| ||||||| | |||  |  |||||||| | || | ||||| ||| || ||||||||||||||||||||    
T  3525268 attgactaatttaagtttatctagtgacataagtactcttgtgactgttcggaagagtttatggaaatagtttatgacatgtccataagct 3525178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 7148809 - 7148699
Alignment:
Q  33 ttgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagat 132  Q
    ||||||||||| || ||||||| |  |||| |||||||| ||| ||||| | || | ||| | ||||| |||||||| ||||||||||||  |||||  |    
T  7148809 ttgacttatttgagcttatctagtcgcataagcacttgtgagagtgttcagcagagcttacggaaacaacttatgacttgtccataagctattttcaact 7148710  T
Q  133 tattttcataa 143  Q
    |||||||||||    
T  7148709 tattttcataa 7148699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 20368164 - 20368250
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    ||||||||||| |||||||||||| ||||||||  |||||  ||||||||||||  | || | || ||||| |||||||| ||||||    
T  20368164 ttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttata 20368250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 696528 - 696495
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctg 123  Q
    |||||||||||||||||||||||| |||||||||    
T  696528 ttatgaaaacagcttatgacatgttcataagctg 696495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 2457085 - 2456989
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttca 129  Q
    |||| ||||||| || |||||||  |||||| ||||||||||||||||| |||||   || || || |||||||| | |||||||||||||| |||||    
T  2457085 attggcttatttgagattatctaccgacataagcacttgtaagactgtt-tggagcacttgtggaagcagcttataatatgtccataagctgttttca 2456989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 4006797 - 4006712
Alignment:
Q  93 tgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||||| |||| || ||||||||||| |  |||||| ||||||||||||  | ||| ||| ||||| |||||||| ||||||||    
T  4006797 tgaaaacaacttacgatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagc 4006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 8183246 - 8183145
Alignment:
Q  75 actgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagctta 174  Q
    ||||||| |||| | |||||||||||||||| || |||| ||||||||| ||| ||  | |||||||||  | || || | |||||||||||||| ||||    
T  8183246 actgttccggagagcttatgaaaacagcttacgaaatgttcataagctgtttttagcctgttttcataagctttctagaatagcttgtgaaaacaactta 8183147  T
Q  175 ta 176  Q
    ||    
T  8183146 ta 8183145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 8420129 - 8420234
Alignment:
Q  38 ttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    |||||| || |||||||||||||||  ||||||| ||||||||   ||| | ||||  ||| ||||||||||||||||| |||||  |||||  ||||||    
T  8420129 ttatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttattt 8420228  T
Q  138 tcataa 143  Q
     |||||    
T  8420229 ccataa 8420234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 9027652 - 9027611
Alignment:
Q  102 cttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||||||||| || |||||| ||||||||||||    
T  9027652 cttatgacatgtccataagttgttttcagcttattttcataa 9027611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 9093539 - 9093628
Alignment:
Q  90 ttatgaaaacagcttatgacat-gtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||||||| |||||||||||| ||  |||| ||| |||||| |||||||| |||  | || | |||||||| |||||||||||||||||    
T  9093539 ttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagc 9093628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 10616697 - 10616750
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||| |||||| |||||||||||| ||||||||| |||||| ||||||| ||||    
T  10616697 ttatcaaaacaccttatgacatgttcataagctgttttcagtttatttttataa 10616750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 32917308 - 32917251
Alignment:
Q  65 cacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagct 122  Q
    ||||||| ||||||||  |||| | ||||| ||||| |||||||||||||||||||||    
T  32917308 cacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagct 32917251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 34404709 - 34404762
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||| | |||||||||||| ||||||||| ||||||  |||||||||||    
T  34404709 ttatgaaaatatcttatgacatgtacataagctgttttcagcatattttcataa 34404762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 1810289 - 1810345
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatat 146  Q
    |||| |||||| || ||| |||||||||||||||||||||| |||||| ||| ||||    
T  1810289 ttattaaaacaactaatggcatgtccataagctgctttcagcttatttccatgatat 1810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 31338062 - 31338030
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagct 122  Q
    ||||||||||| |||||||||||||||||||||    
T  31338062 ttatgaaaacaacttatgacatgtccataagct 31338030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 32577970 - 32578022
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcata 142  Q
    ||||||||||| |||||||||||||| | ||||| |||||| |||||| ||||    
T  32577970 ttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccata 32578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 41957441 - 41957521
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    ||||||||||||||||||||||||| || |||||  ||||||||||||  | ||||||| ||||| |||||||||||||||    
T  41957441 aaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttata 41957521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 11700336 - 11700415
Alignment:
Q  64 gcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||| ||||| ||  |||| | ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  11700336 gcacttgtgagactattgaggagagtttatggaaacaacttatgacatgtccataagctgttttcagattattttcataa 11700415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 11297109 - 11297233
Alignment:
Q  19 agagactgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccata 118  Q
    |||| |||||| |||||||||||||||| ||||||| || ||||  ||||||||||||||||    || | ||||| ||||| |||| |||||||| ||     
T  11297109 agagtctgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtcaatt 11297208  T
Q  119 agctgctttcagattattttcataa 143  Q
    ||||  |||||| ||||||||||||    
T  11297209 agctattttcagcttattttcataa 11297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 11457241 - 11457138
Alignment:
Q  33 ttgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagat 132  Q
    ||||||||||| || |||||||||| || |  ||||||| |||||||| || || | ||||| ||||| |||||||||||||||||||||| ||||| ||    
T  11457241 ttgacttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataagctg-tttcatat 11457143  T
Q  133 tattt 137  Q
    |||||    
T  11457142 tattt 11457138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 14331448 - 14331400
Alignment:
Q  95 aaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  14331448 aaaacagcttatgacatgtccataagctgatttcagcttattttcataa 14331400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 17258868 - 17258920
Alignment:
Q  91 tatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||| |||||||||||||| ||||||||| |||||| ||||||||||||    
T  17258868 tatgaaaatagcttatgacatgttcataagctgttttcagcttattttcataa 17258920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 16889823 - 16889733
Alignment:
Q  88 gattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||||||||||||||||   ||||| ||||| || ||||||||||||| |||||  | || || | ||||| |||||||||||||||||    
T  16889823 gattatgaaaacagcttatactatgtctataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagc 16889733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 3977394 - 3977309
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttat 175  Q
    |||||||||||||||||||||||| | | |||||  ||||| ||||||||||||| | || |  ||| ||| ||||||||||||||    
T  3977394 ttatgaaaacagcttatgacatgttccttagctgtcttcagcttattttcataatttctccacaacaacttatgaaaacagcttat 3977309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 5377123 - 5377200
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgac 109  Q
    |||| ||||||| || ||||||||||||||| |||||||||||||||||   ||    ||||||||||||||||||||    
T  5377123 attggcttatttgagcttatctattgacataagcacttgtaagactgttagcgataacttatgaaaacagcttatgac 5377200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 13604833 - 13604886
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||||||||||||||||||| | || |||||  ||||||||||||    
T  13604833 ttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataa 13604886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 14733921 - 14733808
Alignment:
Q  25 tgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgc 124  Q
    ||||| |||| ||||||||||| ||| ||||||| ||| |||||||||| | ||||    || |||||||||| ||  |||||||||||  |||| ||||    
T  14733921 tgtttaaattaacttatttaagattacctattgatataagcacttgtaaaattgtttgaaagagattatgaaatcattttatgacatgttgataaactgc 14733822  T
Q  125 tttcagattatttt 138  Q
    |||||| |||||||    
T  14733821 tttcagtttatttt 14733808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 21768181 - 21768230
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttc 139  Q
    ||||||||||||||||||||||||||||| |||| |||||  ||||||||    
T  21768181 ttatgaaaacagcttatgacatgtccatacgctgttttcaacttattttc 21768230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 499657 - 499768
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||||||||||| || ||| ||| ||||||| |||| ||| || |||||  ||||   ||||||||||||||||||||||||  | ||| || ||||||     
T  499657 attgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgttaacaagttgttttcagc 499756  T
Q  132 ttattttcataa 143  Q
    |||||| |||||    
T  499757 ttatttccataa 499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 143
Target Start/End: Complemental strand, 4619827 - 4619740
Alignment:
Q  56 tgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||| ||||||| || ||||||  |||| | ||||||||||| || ||||||||| ||||||||| |||||  |||||| |||||    
T  4619827 tgacataagcacttgcaacactgtttgggagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataa 4619740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 8177522 - 8177569
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||| ||||||||||| || |||||| ||||||||||||    
T  8177522 aaacagcttatgatatgtccataagttgttttcaggttattttcataa 8177569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 25079494 - 25079580
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataa 119  Q
    |||||||||||||||| ||||||  |||||| |||||||| ||||| || ||||| | ||||  ||||| ||||||||||||| ||||    
T  25079494 attgacttatttaagtgtatctacggacataagcacttgtgagactatt-tggagagtttatcgaaacaacttatgacatgtctataa 25079580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 25137463 - 25137549
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataa 119  Q
    |||||||||||||||| ||||||  |||||| |||||||| ||||| || ||||| | ||||  ||||| ||||||||||||| ||||    
T  25137463 attgacttatttaagtgtatctacggacataagcacttgtgagactatt-tggagagtttatcgaaacaacttatgacatgtctataa 25137549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 2569679 - 2569732
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||| ||| |||||||||||||||||||||||| ||| || |||| |||||||    
T  2569679 ttatggaaatagcttatgacatgtccataagctgttttaagtttatattcataa 2569732  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 3280698 - 3280751
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||| | ||||||||  ||| || ||||||||||||    
T  3280698 ttatgaaaacagcttatgacatcttcataagctctttttagtttattttcataa 3280751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 10152451 - 10152390
Alignment:
Q  59 catacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataag 120  Q
    |||| |||| ||| ||||| || ||||| | ||||||||||| |||||||||||||||||||    
T  10152451 cataagcacatgtgagactattttggagagcttatgaaaacaacttatgacatgtccataag 10152390  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 15406001 - 15406046
Alignment:
Q  95 aaaacagcttatgacatgtccataagctgctttcagattattttca 140  Q
    ||||||||||||||||||| ||||||||| |||||  |||||||||    
T  15406001 aaaacagcttatgacatgttcataagctgttttcaatttattttca 15406046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 17369429 - 17369470
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    ||||||||||||||||||| ||||| || |||||||||||||    
T  17369429 aaacagcttatgacatgtctataagttgttttcagattattt 17369470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 37611199 - 37611252
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||| ||| |||||||| ||||||||| |||||| |||||| |||||    
T  37611199 ttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataa 37611252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 37787929 - 37787982
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||| ||| |||||||| ||||||||| |||||| |||||| |||||    
T  37787929 ttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataa 37787982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 39105551 - 39105462
Alignment:
Q  90 ttatgaaaacagcttatgaca-tgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||||||||||||||||||| ||| ||||||||  ||| || ||||||||||||  | || | || ||||| ||||||||| |||||||    
T  39105551 ttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagc 39105462  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 1899235 - 1899187
Alignment:
Q  95 aaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||||||||| |||||| || |||||| |||||| |||||    
T  1899235 aaaacagcttatgacatgtgcataagttgttttcagcttatttccataa 1899187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 10791146 - 10791090
Alignment:
Q  24 ctgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgtt 80  Q
    |||||| ||||||||||||| || ||||| ||||||||| | |||||| ||||||||    
T  10791146 ctgtttgaattgacttatttcagcttatcaattgacataagtacttgtgagactgtt 10791090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 14295592 - 14295552
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcag 130  Q
    ||||||||||||||||||| ||||| |||||||| ||||||    
T  14295592 ttatgaaaacagcttatgatatgtcgataagctgttttcag 14295552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 18853156 - 18853044
Alignment:
Q  31 aattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcag 130  Q
    ||||||||| |||||| ||||||  ||||||  |||||||| ||||| ||  ||||   |||||||||||||||| |||||| | || ||||| ||| ||    
T  18853156 aattgacttgtttaagcttatctgctgacatcagcacttgtgagactttttaggagaagttatgaaaacagcttacgacatgcctattagctgtttttag 18853057  T
Q  131 attattttcataa 143  Q
     |||||| |||||    
T  18853056 cttatttccataa 18853044  T

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Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 24624322 - 24624210
Alignment:
Q  64 gcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtg 163  Q
    |||||||||||||||||  | || | |||||||||||||||||||||||||||||| ||| |||||| |||||  ||||| || || |||| ||| | ||    
T  24624322 gcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttcagcttattaacataagatttctaggatagcctatg 24624223  T
Q  164 aaaacagcttata 176  Q
    |||||| ||||||    
T  24624222 aaaacatcttata 24624210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 45541729 - 45541604
Alignment:
Q  18 aagagactgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccat 117  Q
    ||||| ||||||  |||||||||||| || |||| || ||  |||  ||||||||||||||||  | ||   |||||||||||||||||||||||| |||    
T  45541729 aagagcctgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcat 45541630  T
Q  118 aagctgctttcagattattttcataa 143  Q
    |||||| |||||| ||||| ||||||    
T  45541629 aagctgttttcaggttattctcataa 45541604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 1217790 - 1217870
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    ||||||||||||||||||||||||| || |||||  ||| ||||||||  | ||||||| ||||| |||||||||||||||    
T  1217790 aaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttata 1217870  T

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Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 36646311 - 36646405
Alignment:
Q  35 gacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttca 129  Q
    ||||||||||||  ||||||||| |||| |||||||||||||| ||  |||| | ||||| ||||  |||||| ||||||||||||||| |||||    
T  36646311 gacttatttaagcatatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctgttttca 36646405  T

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Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 5391965 - 5391912
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||||| ||||||||| |||||  ||||||||||||    
T  5391965 ttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataa 5391912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 27290885 - 27290932
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  27290885 ttatgaaaacagcttatgacatgcccataagctgttttcagcttattt 27290932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 21574593 - 21574523
Alignment:
Q  73 agactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||  |||| | ||||||||||| |||||||||||| ||||||||||||| || |||||| |||||    
T  21574593 agactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataa 21574523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 30750084 - 30750042
Alignment:
Q  92 atgaaaacagcttatgacatgtccataagctgctttcagatta 134  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  30750084 atgaaaacaacttatgacatgtccataagctgttttcagatta 30750042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 39602194 - 39602280
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    ||||||| |||||||||||||||| |||||  || |||||  ||||||||||||  | |||| || ||||| |||||||||||||||    
T  39602194 ttatgaagacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttata 39602280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 43115195 - 43115089
Alignment:
Q  37 cttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattatt 136  Q
    ||||| |||| |||||||||||||||  ||||||| ||| ||||  | || | ||||| ||||| ||||||||||||||||||  || |||||| |||||    
T  43115195 cttatataaggttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatt 43115096  T
Q  137 ttcataa 143  Q
    | |||||    
T  43115095 tccataa 43115089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 20192532 - 20192629
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttca 129  Q
    ||||||| |||| | |||||||||||||||| |||||| | | |||||    ||| | ||||  |||||||||||||||||||||||||||| |||||    
T  20192532 attgactaatttcaatttatctattgacataagcacttcttacactgtatgagagagcttatagaaacagcttatgacatgtccataagctgttttca 20192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 34254792 - 34254845
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||| ||||||||| |||||||||| ||||||| |||||| |||||    
T  34254792 ttatgaaaacagtttatgacatatccataagctactttcagcttatttacataa 34254845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 36101650 - 36101601
Alignment:
Q  94 gaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||| || |||||| |||||| ||||||||||||    
T  36101650 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataa 36101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 36139960 - 36139911
Alignment:
Q  94 gaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||| || |||||| |||||| ||||||||||||    
T  36139960 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataa 36139911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 39723224 - 39723277
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||| ||||||||||||||||||| ||||||||| |||||| ||||| ||||||    
T  39723224 ttatcaaaacagcttatgacatgttcataagctgttttcagcttattctcataa 39723277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 53762357 - 53762426
Alignment:
Q  69 tgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattatttt 138  Q
    ||||||||||||  ||||  ||| ||||||||||||||||||||| ||||||||| |||||  |||||||    
T  53762357 tgtaagactgttagggagaaattttgaaaacagcttatgacatgttcataagctgttttcaacttatttt 53762426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 16790364 - 16790415
Alignment:
Q  91 tatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||| ||||||||||| |||||||||||| |||||| ||||||||||||    
T  16790364 tatgaaaatagcttatgaca-gtccataagctgttttcagtttattttcataa 16790415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 21367754 - 21367667
Alignment:
Q  90 ttatgaaaacagcttatgaca-tgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    ||||||||||||||||||||| ||| || |||||| |||||| ||||||||||||  | || | || ||||| |||||||| ||||||    
T  21367754 ttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttata 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 22214659 - 22214730
Alignment:
Q  106 tgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatag 177  Q
    |||||||||||||||||| |||||| |||||| | |||| | || |||| ||||| |||||||| |||||||    
T  22214659 tgacatgtccataagctgttttcagcttatttccgtaatgtctctaggatagcttatgaaaacaacttatag 22214730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 3015827 - 3015913
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    ||||||||||| ||||||||||||||||||| || |||||  ||||||| ||||  | ||| |   ||||| |||||||||||||||    
T  3015827 ttatgaaaacaacttatgacatgtccataagatgttttcatcttattttaataagctctcatgattagcttttgaaaacagcttata 3015913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 26599235 - 26599193
Alignment:
Q  100 agcttatgacatgtccataagctgctttcagattattttcata 142  Q
    |||||||||||| ||||||||||| |||||| |||||||||||    
T  26599235 agcttatgacatatccataagctgatttcagcttattttcata 26599193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 30923883 - 30923929
Alignment:
Q  91 tatgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    |||| ||||||||||||||||||| |||||||| |||||| ||||||    
T  30923883 tatggaaacagcttatgacatgtctataagctgttttcagcttattt 30923929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 47513764 - 47513686
Alignment:
Q  65 cacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||| ||||||||| |||||  |||||||||||  |||||||| || |||||| || |||||  ||||||||||||    
T  47513764 cacttgtgagactgttcgggaggacttatgaaaacaagttatgacacgttcataagttgttttcaatttattttcataa 47513686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 39723384 - 39723417
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctg 123  Q
    |||||||||||||||||||||||| |||||||||    
T  39723384 ttatgaaaacagcttatgacatgttcataagctg 39723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 41724298 - 41724209
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattatttt-cataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||| ||||| ||||||||||||||||||| || |||||| |||||||  ||||  | ||||||| ||||  ||||||||| |||||||    
T  41724298 ttatggaaacaacttatgacatgtccataagttgttttcagcttattttatataagctctcaaggatagctgatgaaaacagtttatagc 41724209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 48048966 - 48049019
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||| || || ||||||||||||||||||| |||||| |||||| |||||    
T  48048966 ttatgaaaccaactcatgacatgtccataagctgttttcagcttatttccataa 48049019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 50004784 - 50004691
Alignment:
Q  45 agtttatctattgacatacgcacttgtaagactgttctggaggga-ttatgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    ||||||| || ||||||| ||| |||||||||||||   |||||  ||||| ||||| |||||||||||| | ||||||| |||||| ||||||    
T  50004784 agtttatttactgacataagcaattgtaagactgtttgagagggccttatggaaacaacttatgacatgttcttaagctgttttcagcttattt 50004691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 53952134 - 53952081
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||| || |||||| ||| ||||| |||||| ||||||||||||    
T  53952134 ttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 53952081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 11040599 - 11040651
Alignment:
Q  91 tatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||  ||||||||||||||||| || |||| | ||||||||||||    
T  11040599 tatgaaaacagagtatgacatgtccataagttgttttcggcttattttcataa 11040651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 143
Target Start/End: Complemental strand, 37273251 - 37273167
Alignment:
Q  59 catacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||| ||||| || ||||||||  |||| | ||||| ||||| ||||||||||||||||||| || |||||  |||||| |||||    
T  37273251 cataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataa 37273167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 140
Target Start/End: Complemental strand, 51130822 - 51130786
Alignment:
Q  104 tatgacatgtccataagctgctttcagattattttca 140  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  51130822 tatgacatgtccataagttgctttcagcttattttca 51130786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 6292636 - 6292526
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||||||||||| || ||||||| ||||||| |||||| | ||| ||||  ||||  ||| | ||||||||||||||||||| ||||||||| ||||||     
T  6292636 attgacttatttgagcttatctactgacataagcacttttgagattgtttgggaga-atttttaaaacagcttatgacatgttcataagctgttttcagc 6292538  T
Q  132 ttattttcataa 143  Q
    ||||||||||||    
T  6292537 ttattttcataa 6292526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 11639400 - 11639453
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  11639400 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataa 11639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 26184828 - 26184781
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  26184828 aaacagcttatgacatgtccataagctgttttcagattatttccataa 26184781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 178
Target Start/End: Original strand, 31517671 - 31517812
Alignment:
Q  37 cttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattatt 136  Q
    ||||||| || |||| || || |||| |||||||| ||||||||  ||||   |||| |||||| || ||||||||| ||||||||| |||||| |||||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttatt 31517770  T
Q  137 ttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||||  | || | ||||| || |||| ||||||||||||    
T  31517771 ttcataagctctccaagacagattatgaagacagcttatagc 31517812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 34536285 - 34536216
Alignment:
Q  49 tatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccata 118  Q
    ||||||||||||||  ||||||| ||||||||   || || |||||||||||||||||||||||||||||    
T  34536285 tatctattgacataaacacttgtgagactgtttgagatggcttatgaaaacagcttatgacatgtccata 34536216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 4622245 - 4622129
Alignment:
Q  24 ctgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctg 123  Q
    |||||| |||||||||||||||| ||| ||| ||||||| | |||||| ||||||||  | ||   | |||  |||| ||||||||||||||||||||||    
T  4622245 ctgtttgaattgacttatttaagcttaactaatgacataagaacttgttagactgtttggaagatctaatgggaacatcttatgacatgtccataagctg 4622146  T
Q  124 ctttcagattattttca 140  Q
     ||| || |||||||||    
T  4622145 tttttagcttattttca 4622129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 10744384 - 10744300
Alignment:
Q  93 tgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatag 177  Q
    ||||||||||||||| ||||| ||||||||| |||||  ||||||| ||||  | || | |||||||| ||||||||||||||||    
T  10744384 tgaaaacagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagcttatag 10744300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 176
Target Start/End: Complemental strand, 27140622 - 27140478
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||||||||| | || |||||||||||||||  || ||||||| || ||   ||| | ||| | ||||||||||||||||||||||||| || ||||||     
T  27140622 attgacttatatgagcttatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagc 27140523  T
Q  132 ttattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    |||||| |||||  | || | || ||||| | |||||||||||||    
T  27140522 ttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 44422785 - 44422697
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||||||| ||||||||||||||||||||||||  | ||| ||||||||||||  | || |||| ||||| | |||| ||||||||||    
T  44422785 ttatgaaaatagcttatgacatgtccataagctgactacagcttattttcataagctctccaggatagcttataaaaatagcttatagc 44422697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 4868543 - 4868433
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    ||||| |||||| | |||||||||||||||| |||||||| ||||||||   ||| | ||||| ||||| ||||||||||||| ||||| || |||||      
T  4868543 attgatttatttgaatttatctattgacataggcacttgtgagactgtttgagagagtttatg-aaacaacttatgacatgtcaataagttgttttcaac 4868445  T
Q  132 ttattttcataa 143  Q
    |||||| |||||    
T  4868444 ttatttacataa 4868433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 10199334 - 10199445
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||||||||||| || ||||||| | ||||| |||||||| | ||| ||  ||||   | ||||||| |||||||||||||| |||||| || ||||||     
T  10199334 attgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataagttgttttcagc 10199433  T
Q  132 ttattttcataa 143  Q
    ||||||||||||    
T  10199434 ttattttcataa 10199445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 12763454 - 12763383
Alignment:
Q  45 agtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtcca 116  Q
    ||||||||||||  |||| ||| ||||||||||||| |||||   ||| |||||||||||||||||||||||    
T  12763454 agtttatctattagcataagcatttgtaagactgttttggagaacttacgaaaacagcttatgacatgtcca 12763383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 28689442 - 28689489
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||||    
T  28689442 aaacagcttatgacatgtccataagttgttttcagcttattttcataa 28689489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 10439837 - 10439719
Alignment:
Q  25 tgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgc 124  Q
    ||||| ||||||||||||| || |||| ||| | |||| |  ||||| ||||| ||  |||| | |||||||||||   |||||||||||||||| ||||    
T  10439837 tgtttgaattgacttatttgagcttatttatggccataagatcttgtgagactatttgggagagcttatgaaaacaaactatgacatgtccataatctgc 10439738  T
Q  125 tttcagattattttcataa 143  Q
    |||||| |||||| |||||    
T  10439737 tttcagcttatttccataa 10439719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 32515374 - 32515464
Alignment:
Q  39 tatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttca 129  Q
    ||||| |||||||||| | ||||| |||||||| ||||||||  |||| | ||||| ||||||| ||||||||||| ||||| || |||||    
T  32515374 tatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttca 32515464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 35925776 - 35925723
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||||| ||||||||| |||||  |||||| |||||    
T  35925776 ttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataa 35925723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 4202140 - 4202184
Alignment:
Q  95 aaaacagcttatgacatgtccataagctgctttcagattattttc 139  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||    
T  4202140 aaaacagcttatgacatgtccataagctattttcagcttattttc 4202184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 11695946 - 11695894
Alignment:
Q  91 tatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||| |||||| ||||||||||||||||||||| |||||  ||||||||||||    
T  11695946 tatggaaacagtttatgacatgtccataagctgttttcaacttattttcataa 11695894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 24460390 - 24460470
Alignment:
Q  89 attatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaaca 169  Q
    |||||||||| |||||||||||||| ||||||||| || ||| |||||||  |||  | ||||||| ||||| ||||||||    
T  24460390 attatgaaaatagcttatgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagcttatgaaaaca 24460470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 25479667 - 25479579
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||||||| || ||||||||||| ||| || || |||||| ||||||||||||  | || |||| ||||| |||||||| ||||||||    
T  25479667 ttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagc 25479579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 29045896 - 29045984
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||||||||| ||||||||||||||||||| |||||| |   || || ||| || | || |||||||||| |||||||| ||||||||    
T  29045896 ttatgaaaacaacttatgacatgtccataagttgcttttaacgtacttccatcatctctccaggacagcttatgaaaacaacttatagc 29045984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 38170615 - 38170723
Alignment:
Q  31 aattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcag 130  Q
    |||||||||||||||  |||| || || |||   ||||||| |||||| |  |||| | |||||||||||||||||||||||| |||||| || ||||||    
T  38170615 aattgacttatttaaccttatatactggcatgaacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcataagttgttttcag 38170714  T
Q  131 attattttc 139  Q
     || |||||    
T  38170715 cttgttttc 38170723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 39270409 - 39270461
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcata 142  Q
    ||||||||||||||| || ||||||||||||||| |||||  |||||||||||    
T  39270409 ttatgaaaacagcttttggcatgtccataagctgttttcaacttattttcata 39270461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 1565527 - 1565570
Alignment:
Q  98 acagcttatgacatgtccataagctgctttcagattattttcat 141  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||    
T  1565527 acagcttatgacatgtgcataagctgttttcagcttattttcat 1565570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 37593670 - 37593721
Alignment:
Q  92 atgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||| ||| |||||||||||| ||||||||| |||||| ||||||||||||    
T  37593670 atgaacacaacttatgacatgttcataagctgttttcagcttattttcataa 37593721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 12477273 - 12477323
Alignment:
Q  92 atgaaaacagcttatgacatgtccataagctgctttcagattattttcata 142  Q
    |||||| |||||||||||||||||||||| || |||||| |||||| ||||    
T  12477273 atgaaagcagcttatgacatgtccataagttgttttcagcttatttccata 12477323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 27807266 - 27807168
Alignment:
Q  25 tgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctg 123  Q
    ||||| ||||||||||||| |  || |||| ||||||| ||| |||||||||||||   ||| | |||||||| ||||| ||||| ||| |||||||||    
T  27807266 tgtttaaattgacttatttgaacttttctactgacataagcatttgtaagactgtttgagagagcttatgaaagcagctgatgacgtgttcataagctg 27807168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 10854815 - 10854770
Alignment:
Q  94 gaaaacagcttatgacatgtccataagctgctttcagattattttc 139  Q
    |||||||||||||||||||| || |||||| |||||| ||||||||    
T  10854815 gaaaacagcttatgacatgttcacaagctgttttcagcttattttc 10854770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 15581393 - 15581300
Alignment:
Q  37 cttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcag 130  Q
    ||||||| || ||||||| ||||||| |||||||| ||| ||||  | || | | ||| ||||| ||||||||||||| |||||||| ||||||    
T  15581393 cttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttcag 15581300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 17628685 - 17628645
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcag 130  Q
    ||||| ||||| |||||||||||||||||||||| ||||||    
T  17628685 ttatggaaacaacttatgacatgtccataagctgttttcag 17628645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 21002233 - 21002193
Alignment:
Q  103 ttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||||||||||| |||||  ||||||||||||    
T  21002233 ttatgacatgtccataagctgttttcaatttattttcataa 21002193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 38307773 - 38307669
Alignment:
Q  65 cacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtga 164  Q
    ||||||||| ||||||| ||| |  ||||||||||| || ||||||||| |||||||| ||||| | ||||||||||||| | || | || |||||||||    
T  38307773 cacttgtaacactgttcgggaagacttatgaaaacaactaatgacatgtgcataagctactttcggcttattttcataatttctccaagatagcttgtga 38307674  T
Q  165 aaaca 169  Q
    |||||    
T  38307673 aaaca 38307669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 176
Target Start/End: Original strand, 11569416 - 11569527
Alignment:
Q  65 cacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtga 164  Q
    ||||||| ||||||||   ||| | ||||| |||||||||||||||||| |||||| || |||||| ||||||||| ||| | || | || ||||| |||    
T  11569416 cacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatga 11569515  T
Q  165 aaacagcttata 176  Q
    ||||||||||||    
T  11569516 aaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 30191072 - 30191178
Alignment:
Q  37 cttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattatt 136  Q
    ||||||| ||||||||||||| |||| |||||||| ||||||||  |||| | ||||| ||||| |||||||||||| || ||  || |||||| |||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatt 30191171  T
Q  137 ttcataa 143  Q
    | |||||    
T  30191172 tccataa 30191178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 31705161 - 31705083
Alignment:
Q  100 agcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||| || |||| ||||||||| |||||| |||||| |||||  | ||||||||||||| |||||||||||||||||    
T  31705161 agcttaagagatgtgcataagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagc 31705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 11183631 - 11183543
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||| |||||| ||||||| ||||| |||||||| |||||| |||||| |||||  | || |||  |||||||||||||||||||||||    
T  11183631 ttataaaaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagc 11183543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 12851262 - 12851183
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaaca 169  Q
    ||||||||||||||||| |||||| |||||| || |||| | ||||||||||||  | ||||||| ||||| ||||||||    
T  12851262 ttatgaaaacagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaaca 12851183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 30389184 - 30389097
Alignment:
Q  91 tatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||||| |||| ||||||||| |||||| || |||||| ||||||||||||  | || |||| ||||| |||||||||| ||||||    
T  30389184 tatgaaaatagctaatgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagc 30389097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 37353243 - 37353321
Alignment:
Q  100 agcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    |||||||||||| | ||||| ||| |||||||||||||||||||  | |||| || |||||  ||||||||||||||||    
T  37353243 agcttatgacatattcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaacagcttatagc 37353321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 14949974 - 14949905
Alignment:
Q  68 ttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    |||| ||||||||  |||| | ||||||||| | |||||||||||||||||||||| |||||| ||||||    
T  14949974 ttgtgagactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagcttattt 14949905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 176
Target Start/End: Complemental strand, 26410424 - 26410279
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcag- 130  Q
    |||| |||| ||||||||||| | ||||||| |||||| | |||||| |  |||| | ||||| |||||||| |||||||||||| |||||| ||| ||     
T  26410424 attggcttagttaagtttatcaactgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtccagaagctgtttttagc 26410325  T
Q  131 attattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
     |||||| |||||  | || ||||||| || |||||||| ||||||    
T  26410324 tttatttccataagctctccaggacagtttttgaaaacatcttata 26410279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 26473736 - 26473820
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagctta 174  Q
    ||||||||||||||||||||||||| |||||||  ||| |  ||||||||||||  | || |||| ||||| |||||||| ||||    
T  26473736 ttatgaaaacagcttatgacatgtctataagctagttttaacttattttcataagctctctaggatagcttatgaaaacaactta 26473820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 29168649 - 29168681
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagct 122  Q
    |||||||||||||||||||||||||||||||||    
T  29168649 ttatgaaaacagcttatgacatgtccataagct 29168681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 3254307 - 3254264
Alignment:
Q  94 gaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||    
T  3254307 gaaaacagcttatgacatgttcataagctgttttcagcttattt 3254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 6950466 - 6950355
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||||||||||| |||||||||| || ||||  || |||| ||| ||||  |||| | ||||| ||||| | ||||||||||| ||||| || ||||||     
T  6950466 attgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagc 6950367  T
Q  132 ttattttcataa 143  Q
    |||||| |||||    
T  6950366 ttatttccataa 6950355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 12972966 - 12972891
Alignment:
Q  68 ttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||| ||||||||  ||||  ||||||||||||||||||||||| || |||||||| |||  | ||||||||||||    
T  12972966 ttgtgagactgtttgggagatattatgaaaacagcttatgacatatctataagctggttttggcttattttcataa 12972891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 26499860 - 26499785
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatg 107  Q
    ||||| |||||| | |||||||| ||||||| |||||||| ||||| || || || | ||||||||||||||||||    
T  26499860 attgaattatttgaatttatctactgacataagcacttgtgagactattttgtagaggttatgaaaacagcttatg 26499785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 42215292 - 42215343
Alignment:
Q  92 atgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||| |||||    
T  42215292 atgaaaacagcttatgacttgttcataagctgttttcagcttatttacataa 42215343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 11415240 - 11415154
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    ||||| ||||||||||| |||||||||||||||  | |||| ||||||||| ||  | || |||| ||||| |||||||||| ||||    
T  11415240 ttatggaaacagcttataacatgtccataagctattctcagcttattttcacaaactctctaggatagcttatgaaaacagcgtata 11415154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 143
Target Start/End: Complemental strand, 20672825 - 20672783
Alignment:
Q  101 gcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||    
T  20672825 gcttatgacatgttcataagctgttttcagcttattttcataa 20672783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 39551135 - 39551281
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcaga 131  Q
    |||||||||||| || |||||||  || ||| ||| |||| | ||||||  ||||   ||||| ||||| ||||||||||||||| |||||| ||| |      
T  39551135 attgacttatttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttttaac 39551234  T
Q  132 ttattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||||| ||||  | || |||| ||||| |||||||| ||||||||    
T  39551235 ttatttttataagctctccaggaaagcttatgaaaacaacttatagc 39551281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 2487934 - 2488015
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgt 113  Q
    |||| ||||||| |||| ||||| ||||||| |||||||| ||||||||  ||||   ||||||||||| ||||| ||||||    
T  2487934 attggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataacatgt 2488015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 7008755 - 7008698
Alignment:
Q  19 agagactgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagac 76  Q
    |||| |||||| ||||||||||||| |||||||||| || |||| |||||||| ||||    
T  7008755 agagcctgtttgaattgacttatttgagtttatctactggcataagcacttgtgagac 7008698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 9835884 - 9835937
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||| |||||||||||||||||| ||||||||| |||||  |||||| |||||    
T  9835884 ttatgtaaacagcttatgacatgttcataagctgttttcatcttatttccataa 9835937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 10383971 - 10383918
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||| | ||||||||| || ||| |||||| |||||    
T  10383971 ttatgaaaacagcttatgacattttcataagctgtttacagcttatttccataa 10383918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 13459731 - 13459678
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||||||||| | ||||| ||| ||||||  |||||||||||    
T  13459731 ttatgaaaacagcttatgacattttcataaactgttttcagcctattttcataa 13459678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 30277234 - 30277315
Alignment:
Q  95 aaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttata 176  Q
    |||| |||||| |||||| ||||||| || |||||| |||||| |||||  | || |||| ||||| |||||||||||||||    
T  30277234 aaaatagcttaggacatggccataagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 37740355 - 37740440
Alignment:
Q  34 tgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataa 119  Q
    |||||||||| | ||||||||||||| |||| | |||| |||  |||  |||| | ||||| ||||| ||||||||||||||||||    
T  37740355 tgacttatttgaatttatctattgacgtacgtagttgtgagatggttagggagagtttatggaaacaacttatgacatgtccataa 37740440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 3634610 - 3634658
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgtt 80  Q
    |||||||||||| || ||||||  ||||||| |||||||||||||||||    
T  3634610 attgacttatttgagcttatctgctgacatatgcacttgtaagactgtt 3634658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 8062415 - 8062327
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||| |||||| |||  || |||||||||| || |||||| |||||| |||||| | || | || ||||| |||||||||||||||||    
T  8062415 ttatggaaacagtttacaacgtgtccataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagc 8062327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 9700074 - 9700034
Alignment:
Q  103 ttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||||||||||| |||||  ||||||||||||    
T  9700074 ttatgacatgtccataagctgttttcaccttattttcataa 9700034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 40071835 - 40071747
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaacagcttatagc 178  Q
    ||||| ||||| |||||||||||| ||||| | |||||||  | ||||||||||  | || |||| ||||| ||||||||| |||||||    
T  40071835 ttatggaaacaacttatgacatgttcataatcagctttcaactaattttcataagctttctaggatagcttctgaaaacagtttatagc 40071747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 6428169 - 6428074
Alignment:
Q  25 tgtttcaattgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataag 120  Q
    ||||| ||||||||||||| || |||| |||||  ||| |||||||| |||| |||   ||| ||||||||||||| |||||||||||||||||||    
T  6428169 tgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataag 6428074  T

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Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 2996701 - 2996607
Alignment:
Q  48 ttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcata 142  Q
    |||| |||||||||| |||||| | ||||||||   ||| | ||||||||||| |||||||||||||||||||||  |||||  |||||||||||    
T  2996701 ttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcata 2996607  T

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Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 7367980 - 7368077
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttca 129  Q
    |||||||||||| ||||||||||  | ||||  | ||||| ||||||||  |||| | | ||||||||||||||||||||||  ||||||||||||||    
T  7367980 attgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgtttataagctgctttca 7368077  T

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Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 52754685 - 52754638
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  52754685 ttatgaaaacagtttatgacgtgtccataagctgctttcagcttattt 52754638  T

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Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 32072005 - 32071907
Alignment:
Q  34 tgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagatt 133  Q
    |||||||||| |||||||||||||||||| |||||||| |||| ||  | |||   ||||| ||||| ||||||||| |||||||||||| ||| || ||    
T  32072005 tgacttatttgagtttatctattgacataagcacttgtgagacagt--ttgag---ttatggaaacaacttatgacacgtccataagctgttttaagctt 32071911  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 21043195 - 21043271
Alignment:
Q  66 acttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagattattttcata 142  Q
    |||||| ||||||||  |||| | ||||| ||||||||||||||| || ||||||||| ||||||  ||||||||||    
T  21043195 acttgtgagactgtttgggagaggttatggaaacagcttatgacacgttcataagctgttttcagtgtattttcata 21043271  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 29467614 - 29467661
Alignment:
Q  96 aaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||| ||||||||||||||||||||||| |||||| |||||| |||||    
T  29467614 aaacggcttatgacatgtccataagctgttttcagcttatttccataa 29467661  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 130
Target Start/End: Original strand, 3646673 - 3646703
Alignment:
Q  100 agcttatgacatgtccataagctgctttcag 130  Q
    |||||||||||||||||||||||||||||||    
T  3646673 agcttatgacatgtccataagctgctttcag 3646703  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 33534096 - 33534206
Alignment:
Q  33 ttgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataagctgctttcagat 132  Q
    ||||||||||| || ||||||| ||||||| | |||||| ||| | ||   ||| | |||||||||||  || |||||| |||||||| || |||||| |    
T  33534096 ttgacttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataagttgttttcagct 33534195  T
Q  133 tattttcataa 143  Q
    |||||||||||    
T  33534196 tattttcataa 33534206  T

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Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 1137798 - 1137745
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||| |||||||||||| |||||| || |||||| |||||| |||||    
T  1137798 ttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataa 1137745  T

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Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 6978958 - 6978999
Alignment:
Q  102 cttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||||||||| |||||||| |||||| ||||||||||||    
T  6978958 cttatgacatgtctataagctgttttcagcttattttcataa 6978999  T

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Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 8469030 - 8468981
Alignment:
Q  94 gaaaacagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    ||||||| |||| | |||||||||||| || |||||||||||||||||||    
T  8469030 gaaaacatcttacggcatgtccataagttgttttcagattattttcataa 8468981  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 18628479 - 18628555
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatga 108  Q
    |||||| ||||| || ||||||| |||||||  ||||||| ||||||||  |||| | ||||||||||| |||||||    
T  18628479 attgacgtatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 21592999 - 21593043
Alignment:
Q  99 cagcttatgacatgtccataagctgctttcagattattttcataa 143  Q
    |||||||||||||||  ||||||||||||||| |||||| |||||    
T  21592999 cagcttatgacatgtttataagctgctttcagcttatttccataa 21593043  T

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Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 27970144 - 27970104
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcag 130  Q
    ||||||||||| ||||||||||||| |||||||| ||||||    
T  27970144 ttatgaaaacaacttatgacatgtctataagctgttttcag 27970104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 28615478 - 28615391
Alignment:
Q  32 attgacttatttaagtttatctattgacatacgcacttgtaagactgttctggagggattatgaaaacagcttatgacatgtccataag 120  Q
    ||||||||||||||||||||||| |  ||||  ||||||| ||| |||| |||||   |||||||||||||| ||||||| | ||||||    
T  28615478 attgacttatttaagtttatctactagcataaacacttgtgagattgtt-tggagaacttatgaaaacagctaatgacattttcataag 28615391  T

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Target: scaffold0072 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 5045 - 4998
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattt 137  Q
    |||||||||||||||||||||||||||||||||| ||| || ||||||    
T  5045 ttatgaaaacagcttatgacatgtccataagctgattttagcttattt 4998  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 306412 - 306333
Alignment:
Q  90 ttatgaaaacagcttatgacatgtccataagctgctttcagattattttcataatatatcaaggacagcttgtgaaaaca 169  Q
    ||||| ||||||||||||||||| |||||||||| |||||| ||| || |||||  | || |||| ||||| ||||||||    
T  306412 ttatggaaacagcttatgacatgcccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaaca 306333  T

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