View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11673_low_6 (Length: 223)
Name: NF11673_low_6
Description: NF11673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11673_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 53983190 - 53983360
Alignment:
| Q |
17 |
gggcaagtatgctttcgacagcaaagttttataatatcatattaaaattaaaataaagaacaaatgcatctacgatggtatttcaagtagtgggcggggt |
116 |
Q |
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| T |
53983190 |
gggcaagtatgctttcgacagcaaagttttataatatcatattaaaattaaaataaagaacaaatgcatctacgatggtatttcaagtagtgggcggggt |
53983289 |
T |
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| Q |
117 |
accaaatttcaacatgctccatgcaagacatcaaaaacttgcagtaaatgacagcagaattaagagtatcc |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53983290 |
accaaatttcaacatgctccatgcaagacatcaaaaacttgcagtaaatgacagcagaattaagagtatcc |
53983360 |
T |
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