View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11675_low_6 (Length: 373)
Name: NF11675_low_6
Description: NF11675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11675_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 42 - 357
Target Start/End: Complemental strand, 36953468 - 36953150
Alignment:
| Q |
42 |
cttaattttgaactgcacttttcatctcaaaaacacaaataaagcttgcaaatatgaagaattgcacaattccccataccaagtacacaattcttcagag |
141 |
Q |
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| T |
36953468 |
cttaattttgaactgcacttttcatctcaaaaacacaaataaagcttgcaaatatgaagaattgcacaattccccataccaagtacacaattcttcagag |
36953369 |
T |
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| Q |
142 |
ttgagaccccatttcatcattggaaaagtgtttaaatttgaataagaaagaaaaaggcaaatatatatgaccataaataaaatccaccaatattccaatt |
241 |
Q |
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| T |
36953368 |
ttgagaccccatttcatcattggaaaagtgtttaaatttgaataagaaagaaaaaggcaaatatatatgaccataaataaaatccaccaatattccaatt |
36953269 |
T |
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| Q |
242 |
aatacactcctaaagataaatttttcccaag----taattataccaaactgaatttgattgtgggaaaatgcacaagctacaaacctacaactgatcaag |
337 |
Q |
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| T |
36953268 |
aatacactcctaaagat-aatttttcccaagtaattaattataccaaactgaatttgattgtgggaaaatgcacaagctacaaacctacaactgatcaag |
36953170 |
T |
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| Q |
338 |
tagtgatgttactaaagaaa |
357 |
Q |
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| T |
36953169 |
tagtgaagttactaaagaaa |
36953150 |
T |
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