View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11679_low_5 (Length: 386)
Name: NF11679_low_5
Description: NF11679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11679_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 106 - 366
Target Start/End: Complemental strand, 33790139 - 33789880
Alignment:
| Q |
106 |
cttgttggagtgatgaatttcttgatgatatgtgtcagttttacatatgtatttttataaattattaatatcatacttcttnnnnnnnn-ttattaatat |
204 |
Q |
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| T |
33790139 |
cttgttggagtgatgaatttcttgatgatatgtgtcacttttacatatgtatttttataaattattaatatcatacttcttaaaaaaaaattattaatat |
33790040 |
T |
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| Q |
205 |
cataagaaagaaaaaataacttgcattttaactggtaaattaaatatatttgcaaagaaaacattcatgtatgatatattttgtagatcatctcaaattt |
304 |
Q |
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| T |
33790039 |
cataagaaagaaaaaataacttgcattttaactggtaaattaattatattttcaaagaaaacattcatgtatgaaatattttgtagatcatctcaaattt |
33789940 |
T |
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| Q |
305 |
aaggacaaataattgtttggaaagagagtaaaactaatgtatatatatcattggagtggatt |
366 |
Q |
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| T |
33789939 |
agggacaaataattgtttggaaagagagtaaaactaatgtat--atatcattggagtggatt |
33789880 |
T |
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