View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11680_low_6 (Length: 300)

Name: NF11680_low_6
Description: NF11680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11680_low_6
NF11680_low_6
[»] chr7 (35 HSPs)
chr7 (150-295)||(17904162-17904307)
chr7 (151-295)||(26770179-26770323)
chr7 (151-295)||(29427297-29427441)
chr7 (151-295)||(37179465-37179608)
chr7 (151-295)||(46467468-46467612)
chr7 (151-295)||(6387825-6387969)
chr7 (151-295)||(6389732-6389876)
chr7 (150-295)||(9876263-9876407)
chr7 (150-295)||(29890959-29891104)
chr7 (151-295)||(41921987-41922131)
chr7 (151-295)||(4405109-4405253)
chr7 (155-274)||(31503091-31503210)
chr7 (151-260)||(19523863-19523974)
chr7 (154-250)||(9332364-9332460)
chr7 (166-293)||(33974506-33974636)
chr7 (151-295)||(12252069-12252216)
chr7 (171-295)||(9215595-9215722)
chr7 (151-266)||(29722955-29723070)
chr7 (151-266)||(43701551-43701666)
chr7 (166-295)||(46689878-46690011)
chr7 (151-295)||(31858225-31858371)
chr7 (151-266)||(33379130-33379244)
chr7 (166-228)||(49011058-49011120)
chr7 (151-296)||(33915717-33915863)
chr7 (209-295)||(48049057-48049146)
chr7 (171-295)||(5514797-5514923)
chr7 (150-184)||(17904407-17904441)
chr7 (151-184)||(4405353-4405386)
chr7 (151-184)||(29723381-29723414)
chr7 (151-184)||(29890826-29890859)
chr7 (151-184)||(37179331-37179364)
chr7 (151-183)||(46467335-46467367)
chr7 (151-184)||(6387692-6387725)
chr7 (241-295)||(22753201-22753257)
chr7 (151-183)||(26770424-26770456)
[»] chr3 (35 HSPs)
chr3 (150-295)||(18996966-18997111)
chr3 (150-295)||(18999505-18999650)
chr3 (150-295)||(39528748-39528893)
chr3 (151-295)||(29371671-29371815)
chr3 (151-295)||(32677610-32677754)
chr3 (151-294)||(1352130-1352273)
chr3 (151-295)||(41349504-41349648)
chr3 (150-295)||(28228435-28228580)
chr3 (151-295)||(39807112-39807256)
chr3 (151-295)||(55365908-55366052)
chr3 (154-295)||(21974152-21974293)
chr3 (154-295)||(21996583-21996724)
chr3 (151-295)||(36737967-36738111)
chr3 (157-295)||(38855323-38855461)
chr3 (154-295)||(22157261-22157402)
chr3 (158-286)||(29014832-29014960)
chr3 (166-295)||(39518422-39518551)
chr3 (151-295)||(32839949-32840092)
chr3 (166-295)||(49040977-49041107)
chr3 (151-220)||(49319347-49319416)
chr3 (151-184)||(1351996-1352029)
chr3 (151-184)||(18997211-18997244)
chr3 (151-184)||(18999750-18999783)
chr3 (151-184)||(29014690-29014723)
chr3 (151-184)||(36737834-36737867)
chr3 (151-184)||(38855561-38855594)
chr3 (151-184)||(39518651-39518684)
chr3 (151-184)||(39528993-39529026)
chr3 (151-184)||(41349371-41349404)
chr3 (151-183)||(46878980-46879012)
chr3 (176-263)||(837370-837455)
chr3 (150-184)||(29371537-29371571)
chr3 (150-184)||(32677476-32677510)
chr3 (150-184)||(39806978-39807012)
chr3 (157-257)||(34667662-34667762)
[»] chr8 (24 HSPs)
chr8 (151-295)||(33837862-33838006)
chr8 (150-295)||(2508929-2509074)
chr8 (151-295)||(28378947-28379091)
chr8 (150-295)||(45334409-45334554)
chr8 (156-281)||(13469652-13469777)
chr8 (151-295)||(25106211-25106355)
chr8 (151-295)||(9739985-9740129)
chr8 (151-295)||(38495605-38495749)
chr8 (151-274)||(27793345-27793468)
chr8 (195-295)||(2626371-2626472)
chr8 (151-295)||(32183614-32183759)
chr8 (151-220)||(27024433-27024502)
chr8 (151-218)||(25978969-25979036)
chr8 (151-266)||(8235162-8235276)
chr8 (186-266)||(3203413-3203492)
chr8 (166-213)||(2626667-2626714)
chr8 (151-184)||(25106455-25106488)
chr8 (151-184)||(27027655-27027688)
chr8 (151-184)||(28379191-28379224)
chr8 (151-184)||(33837729-33837762)
chr8 (151-184)||(45334276-45334309)
chr8 (151-183)||(9740231-9740263)
chr8 (151-184)||(38495472-38495505)
chr8 (151-183)||(13469508-13469540)
[»] chr6 (16 HSPs)
chr6 (151-295)||(27312249-27312393)
chr6 (151-295)||(32274434-32274578)
chr6 (153-295)||(8504835-8504977)
chr6 (158-295)||(5003889-5004026)
chr6 (151-295)||(29452675-29452820)
chr6 (151-253)||(12174700-12174802)
chr6 (151-295)||(31171123-31171267)
chr6 (151-266)||(18741947-18742062)
chr6 (212-295)||(2543142-2543225)
chr6 (151-295)||(7156370-7156502)
chr6 (150-199)||(29302500-29302549)
chr6 (150-184)||(8504732-8504766)
chr6 (151-184)||(27312114-27312147)
chr6 (150-184)||(32274678-32274712)
chr6 (151-184)||(2543325-2543358)
chr6 (151-183)||(18742191-18742223)
[»] chr5 (24 HSPs)
chr5 (151-295)||(12399079-12399223)
chr5 (151-295)||(34208538-34208682)
chr5 (151-295)||(29874954-29875098)
chr5 (151-295)||(23090298-23090442)
chr5 (151-295)||(4145694-4145838)
chr5 (151-295)||(4695295-4695439)
chr5 (151-290)||(3077597-3077736)
chr5 (166-285)||(42757953-42758072)
chr5 (216-295)||(22646042-22646121)
chr5 (166-266)||(12096365-12096466)
chr5 (150-266)||(41610579-41610695)
chr5 (151-220)||(42793040-42793109)
chr5 (154-218)||(4434783-4434847)
chr5 (172-295)||(22528023-22528149)
chr5 (151-184)||(12398946-12398979)
chr5 (151-184)||(29875198-29875231)
chr5 (151-184)||(42757805-42757838)
chr5 (151-184)||(42793562-42793595)
chr5 (151-183)||(23090543-23090575)
chr5 (151-183)||(41610373-41610405)
chr5 (151-262)||(19574686-19574795)
chr5 (166-200)||(594328-594362)
chr5 (154-220)||(8718028-8718094)
chr5 (151-184)||(34208782-34208815)
[»] chr1 (29 HSPs)
chr1 (151-295)||(47669119-47669263)
chr1 (151-294)||(46220259-46220402)
chr1 (151-295)||(10737834-10737978)
chr1 (151-289)||(4817269-4817407)
chr1 (151-295)||(9831503-9831647)
chr1 (151-295)||(18126851-18126994)
chr1 (151-295)||(3384728-3384870)
chr1 (151-287)||(4055484-4055620)
chr1 (151-295)||(48564818-48564961)
chr1 (166-290)||(8889457-8889581)
chr1 (152-295)||(7414208-7414351)
chr1 (150-253)||(1236205-1236308)
chr1 (171-295)||(39241172-39241296)
chr1 (151-230)||(1749521-1749600)
chr1 (151-220)||(33020206-33020275)
chr1 (174-266)||(26842462-26842552)
chr1 (151-266)||(33846820-33846935)
chr1 (151-266)||(33947043-33947158)
chr1 (208-279)||(37875849-37875920)
chr1 (150-184)||(47669363-47669397)
chr1 (151-184)||(10737701-10737734)
chr1 (151-184)||(46220503-46220536)
chr1 (152-184)||(1236071-1236103)
chr1 (151-182)||(48565063-48565094)
chr1 (166-266)||(49112439-49112535)
chr1 (150-184)||(8889687-8889721)
chr1 (154-184)||(9831747-9831777)
chr1 (151-184)||(33023428-33023461)
chr1 (151-184)||(37875727-37875760)
[»] chr2 (15 HSPs)
chr2 (153-295)||(15233757-15233899)
chr2 (151-295)||(43040982-43041126)
chr2 (151-295)||(35793040-35793183)
chr2 (151-295)||(41252415-41252559)
chr2 (151-289)||(31296083-31296221)
chr2 (151-294)||(44104683-44104833)
chr2 (151-295)||(41642891-41643038)
chr2 (166-295)||(31903513-31903641)
chr2 (151-220)||(10118660-10118729)
chr2 (166-288)||(21727684-21727809)
chr2 (151-184)||(10112339-10112372)
chr2 (151-184)||(15233999-15234032)
chr2 (151-220)||(36963131-36963200)
chr2 (151-184)||(43040849-43040882)
chr2 (151-183)||(44104546-44104578)
[»] chr4 (21 HSPs)
chr4 (151-295)||(45590742-45590886)
chr4 (151-295)||(8955909-8956053)
chr4 (161-295)||(34334342-34334476)
chr4 (151-295)||(33288538-33288682)
chr4 (157-295)||(49162108-49162245)
chr4 (151-295)||(18835705-18835851)
chr4 (151-243)||(30469353-30469445)
chr4 (154-250)||(39481906-39482002)
chr4 (166-295)||(50774191-50774325)
chr4 (217-295)||(36971115-36971192)
chr4 (151-220)||(19256186-19256255)
chr4 (166-266)||(26025685-26025784)
chr4 (103-154)||(34862442-34862493)
chr4 (151-201)||(36016279-36016329)
chr4 (166-220)||(36968353-36968407)
chr4 (166-295)||(33109031-33109163)
chr4 (150-185)||(19257103-19257138)
chr4 (154-184)||(8955779-8955809)
chr4 (150-184)||(45590986-45591020)
chr4 (151-184)||(49162332-49162365)
chr4 (152-184)||(39482106-39482138)
[»] scaffold0103 (1 HSPs)
scaffold0103 (151-295)||(44619-44764)


Alignment Details
Target: chr7 (Bit Score: 142; Significance: 2e-74; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 17904162 - 17904307
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17904162 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttac 17904261  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17904262 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 17904307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 26770179 - 26770323
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26770179 tactccctccattccttttcttttgatgttttagaacttcaactaaattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 26770278  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26770279 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 26770323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 29427441 - 29427297
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29427441 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 29427342  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  29427341 cttgttggaaaacacaataaactattaaagtagttgtgatctttg 29427297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 37179608 - 37179465
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  37179608 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttct-aagtttacc 37179510  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37179509 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 37179465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 46467612 - 46467468
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46467612 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 46467513  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
     ||||||||||||||||||||||||||||||||||| ||||||||    
T  46467512 tttgttggaaaacacaataaactattaaagtagttgcgacctttg 46467468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 6387969 - 6387825
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  6387969 tactccctccattccttttcttttgatgttttagaactgcaactatattccaaaacttttgatgttttagtgaatttgttattgttttatcaagtttacc 6387870  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  6387869 cttgttggaaaacacaataaactattaaagtagttgtgacatttg 6387825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 6389732 - 6389876
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  6389732 tactccctccattcattttgttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttact 6389831  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  6389832 cttgttggaaaacacaataaactattaaagtagttgtgacatttg 6389876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 9876263 - 9876407
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  9876263 ctactccc-ccattccttttcttttgatgttttaaaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaattttac 9876361  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  9876362 ccttgttggaaaacaccataaactattaaagtagttgtgacctttg 9876407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 150 - 295
Target Start/End: Complemental strand, 29891104 - 29890959
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||     
T  29891104 ctactccctccattccttttcttttgatgttttaaaacttcaactatattccaaaatttttgatgttttagtgaatttatgattgttttctcaagtttat 29891005  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  29891004 ccttgatggaaaacacaataaactattaaagtagttgtgacttttg 29890959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 41922131 - 41921987
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  41922131 tactccctctatttcttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttaatattgttttatcaagtttacc 41922032  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||    
T  41922031 cttgttgaaaaacacaataaactattaaagtagttgcaacctttg 41921987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 4405109 - 4405253
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||| |    
T  4405109 tactccctccatttcttttcttttgatgttttaaaacttcaactatattctaaaacatttgatgttttagtgaatttattattgttttctcaattttatc 4405208  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  4405209 cttgttggaaaacaccataaattattaaagtagttgtgacctttg 4405253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 31503210 - 31503091
Alignment:
Q  155 ccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttg 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  31503210 ccctccgttccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttcttaagtttacccttg 31503111  T
Q  255 ttggaaaacacaataaacta 274  Q
    ||||||||||| ||||||||    
T  31503110 ttggaaaacactataaacta 31503091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 151 - 260
Target Start/End: Complemental strand, 19523974 - 19523863
Alignment:
Q  151 tactccctccattccttttcttt--tgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagttta 248  Q
    ||||||||| ||||||||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  19523974 tactccctctattccttttttttgttgatgttttagaacttcaactatattccaaaatttttgatgttttagtgaatttattattgttttatcaagttta 19523875  T
Q  249 cccttgttggaa 260  Q
    ||||||||||||    
T  19523874 cccttgttggaa 19523863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 9332364 - 9332460
Alignment:
Q  154 tccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  9332364 tccctccattttttttcttttgatgttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttattattgttttctcaggtttacc 9332460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 166 - 293
Target Start/End: Original strand, 33974506 - 33974636
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacac 265  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||| ||||||||||| ||||| |||| ||||| ||||||||||||||||| |||||||    
T  33974506 ttttcttttgatgttttcgaacttcaactatattccaaaatattttatgttttagtatatttaatatttttttcccaagtttacccttgttgaaaaacac 33974605  T
Q  266 a--at-aaactattaaagtagttgtgacctt 293  Q
    |  || |||||||||||| ||||||||||||    
T  33974606 accataaaactattaaaggagttgtgacctt 33974636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 12252069 - 12252216
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||| || || ||||| | |||||||| |||||||||     
T  12252069 tactccctccattttttttcttttgatgttttagaacttcaactatattccaaaatatttgatgttctaatatatttaatcttgttttcccaagtttact 12252168  T
Q  251 cttgttggaaaacaca--at-aaactattaaagtagttgtgacctttg 295  Q
    || |||| ||||||||  || |||||||||||| |||| |||| ||||    
T  12252169 ctagttgaaaaacacaccataaaactattaaaggagttatgacttttg 12252216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 9215722 - 9215595
Alignment:
Q  171 ttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaa--acacaat 268  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||| || || |||| |||| |||| ||||||||||||| |||  |||| ||    
T  9215722 ttttgatgttttagaacttcaactatattccaaaatatttaatgttttagtatatgtaatatttttttttcaaatttacccttgttgaaaaagacaccat 9215623  T
Q  269 -aaactattaaagtagttgtgacctttg 295  Q
     ||| |||||||| ||||||||||||||    
T  9215622 aaaattattaaaggagttgtgacctttg 9215595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 29722955 - 29723070
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||  |  ||||||| | |||   ||| ||||||    
T  29722955 tactctctccattccttttcttttgatattttagaacttaaactttattccaaaacttttgatgttttataatttttattactttttatccaattttacc 29723054  T
Q  251 cttgttggaaaacaca 266  Q
    ||||||| ||||||||    
T  29723055 cttgttgaaaaacaca 29723070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 43701551 - 43701666
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||  ||||||||||||| |  |||| |||| |||   ||| ||||||    
T  43701551 tactccctccattccttttcttttgatgttttagaacttaaacttcattccaaaaaatttgatgttttagaatttttaatattttttatccaattttacc 43701650  T
Q  251 cttgttggaaaacaca 266  Q
    ||||||| ||||||||    
T  43701651 cttgttgaaaaacaca 43701666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 295
Target Start/End: Original strand, 46689878 - 46690011
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaa---a 262  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||   ||| |||| ||||| ||||||||||||| ||| |||   |    
T  46689878 ttttcttttgatgttttagaacttcaactatattccaaaatacttgatgttttagtatggttaatatttttttcccaagtttaccctttttgaaaaaaca 46689977  T
Q  263 cacaat-aaactattaaagtagttgtgacctttg 295  Q
    ||| || |||||||||||| ||||||||| ||||    
T  46689978 cacgataaaactattaaagaagttgtgacatttg 46690011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 31858371 - 31858225
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||  |||||||||||||||||| |||||||||||||||  ||||  ||||||||||||||| ||||| | || ||||| ||| ||||||    
T  31858371 tactccctccattttttttcttttgatgttttacaacttcaactatattttaaaatatttgatgttttagtatatttaat-tttttttcccaaatttacc 31858273  T
Q  251 cttgttggaaaacaca--at-aaactattaaagtagttgtgacctttg 295  Q
    || |||| ||||||||  || ||| |||||||  ||||||||||||||    
T  31858272 ctcgttgaaaaacacatcataaaagtattaaatgagttgtgacctttg 31858225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 151 - 266
Target Start/End: Complemental strand, 33379244 - 33379130
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||  ||||||||||||| |  |||| |||| || || ||| ||||||    
T  33379244 tactccctccatttcttttcttttgatgttttagaacttcaacttgatttcaaaatatttgatgttttaggatttttaatatttttatc-caattttacc 33379146  T
Q  251 cttgttggaaaacaca 266  Q
    ||||||| ||||||||    
T  33379145 cttgttgaaaaacaca 33379130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 49011120 - 49011058
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaattta 228  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||| |||||    
T  49011120 ttttcttttgatgttttaggacttcaactatatttcaaaacatttgatgttttagtatattta 49011058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 296
Target Start/End: Original strand, 33915717 - 33915863
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||  |||||||||| |||||| ||| || ||||||||| |||||  ||||||||||||||| ||||| | || ||||| |||||||| |    
T  33915717 tactccctccattt-ttttcttttgttgtttttgaattttaactatatttcaaaatatttgatgttttagtatatttaatttttttttcccaagttta-c 33915814  T
Q  251 cttgttggaaaacaca--at-aaactattaaagtagttgtgacctttgc 296  Q
    ||||||| ||||||||  || |||||||||||   ||||||||||||||    
T  33915815 cttgttgaaaaacacaccataaaactattaaataggttgtgacctttgc 33915863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 48049057 - 48049146
Alignment:
Q  209 ttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacacaat---aaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||| ||||| |||| ||||| ||||||||||| ||||| |||||||| |   |||||||||||| ||||||||||||||    
T  48049057 ttgatgttttagtatatttaatatttttttcccaagtttacccctgttgaaaaacacactagaaaactattaaaggagttgtgacctttg 48049146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 5514797 - 5514923
Alignment:
Q  171 ttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacacaat-- 268  Q
    |||| |||||||||||||| || ||||||| ||||  ||||||  ||||||| ||||| |||| | || |||||||||||||||||  |||||||| |      
T  5514797 ttttaatgttttagaactttaaatatattctaaaatatttgattatttagtatatttaatatt-tattttcaagtttacccttgttaaaaaacacactat 5514895  T
Q  269 -aaactattaaagtagttgtgacctttg 295  Q
     |||||||||||  ||||||||||||||    
T  5514896 aaaactattaaaagagttgtgacctttg 5514923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 17904441 - 17904407
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||||||||||||||||||||||||    
T  17904441 ctactccctccattccttttcttttgatgttttag 17904407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 4405386 - 4405353
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  4405386 tactccctccattccttttcttttgatgttttag 4405353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 29723414 - 29723381
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  29723414 tactccctccattccttttcttttgatgttttag 29723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 29890826 - 29890859
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  29890826 tactccctccattccttttcttttgatgttttag 29890859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 37179331 - 37179364
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  37179331 tactccctccattccttttcttttgatgttttag 37179364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 46467335 - 46467367
Alignment:
Q  151 tactccctccattccttttcttttgatgtttta 183  Q
    |||||||||||||||||||||||||||||||||    
T  46467335 tactccctccattccttttcttttgatgtttta 46467367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 6387692 - 6387725
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    |||| |||||||||||||||||||||||||||||    
T  6387692 tacttcctccattccttttcttttgatgttttag 6387725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 22753257 - 22753201
Alignment:
Q  241 caagtttacccttgttggaaaacaca--ataaactattaaagtagttgtgacctttg 295  Q
    ||||||||| |||||||||||||| |  |||||||||||||  ||||||||||||||    
T  22753257 caagtttacgcttgttggaaaacaaactataaactattaaaaaagttgtgacctttg 22753201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 26770456 - 26770424
Alignment:
Q  151 tactccctccattccttttcttttgatgtttta 183  Q
    |||||||||||||| ||||||||||||||||||    
T  26770456 tactccctccattcattttcttttgatgtttta 26770424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 18996966 - 18997111
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18996966 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttac 18997065  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  18997066 ccttgttggaaaacacaataaactattaaagtagttgtgacttttg 18997111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 18999505 - 18999650
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18999505 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttac 18999604  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  18999605 ccttgttggaaaacacaataaactattaaagtagttgtgacttttg 18999650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 39528748 - 39528893
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  39528748 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttac 39528847  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39528848 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 39528893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 29371815 - 29371671
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29371815 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 29371716  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  29371715 cttgttggaaaacacaataaactattaaagtacttgtgacctttg 29371671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 32677754 - 32677610
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32677754 tactccctccattccttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 32677655  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32677654 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 32677610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 1352273 - 1352130
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  1352273 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 1352174  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgaccttt 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1352173 cttgttggaaaacacaataaactattaaagtagttgtgaccttt 1352130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 41349648 - 41349504
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  41349648 tactccctccattccttttcttttgatgttttagaacttcaactatattctaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 41349549  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  41349548 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 41349504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 28228435 - 28228580
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28228435 ctactctctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttac 28228534  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||||    
T  28228535 ccttgttggaaaatacaataaactattaaagtagctgtgacatttg 28228580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 39807256 - 39807112
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  39807256 tacttcctccattccttttcttttgatgttttagaacttcaactatattacaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 39807157  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    || ||||||||||||||||||||||||||||||||||||||||||    
T  39807156 ctcgttggaaaacacaataaactattaaagtagttgtgacctttg 39807112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 55365908 - 55366052
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  55365908 tactcccttcattccttttcttttgatgttttagaacttcaactatatttcaaattttttgatgttttagtgaatttattattgttttctcaagtttacc 55366007  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  55366008 cttgttagaaaacacaataaactattaaagtagttgtgacctttg 55366052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 21974152 - 21974293
Alignment:
Q  154 tccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttaccctt 253  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||    
T  21974152 tccctccatttcttttcttttgatgttttagaatttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaggtttaccttt 21974251  T
Q  254 gttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  21974252 gttggaaaacaccataaaatattaaagtagttgtgacctttg 21974293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 21996583 - 21996724
Alignment:
Q  154 tccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttaccctt 253  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||    
T  21996583 tccctccatttcttttcttttgatgttttagaatttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaggtttaccttt 21996682  T
Q  254 gttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  21996683 gttggaaaacaccataaaatattaaagtagttgtgacctttg 21996724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 36738111 - 36737967
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||     
T  36738111 tactccattcattccttttcttttgatgttttagaactttaactatattttaaaacttttgatgttttagtgaatttattattgttttctcaagtttact 36738012  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  36738011 cttgttggaaaacacaataaactattaaagtagttgtgacatttg 36737967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 157 - 295
Target Start/End: Original strand, 38855323 - 38855461
Alignment:
Q  157 ctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgtt 256  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||    
T  38855323 ctccattccttttcttttgatgttttaaaacatcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaattttatccttgtt 38855422  T
Q  257 ggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    | ||||||| |||||||||||||||||||||||||||||    
T  38855423 gaaaaacaccataaactattaaagtagttgtgacctttg 38855461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 22157261 - 22157402
Alignment:
Q  154 tccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttaccctt 253  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||| ||    
T  22157261 tccctccatttcttttcttttgatgttttagaacttcaactatattctaaaacttttgatattttagtgaatttattattgttttctcaggtttaccttt 22157360  T
Q  254 gttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  22157361 gttggaaaacaccataaaatattaaagtagttgtgacctttg 22157402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 158 - 286
Target Start/End: Complemental strand, 29014960 - 29014832
Alignment:
Q  158 tccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttg 257  Q
    ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29014960 tccattctttttttttttatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacccttgttg 29014861  T
Q  258 gaaaacacaataaactattaaagtagttg 286  Q
    ||||||||| |||||||||||||||||||    
T  29014860 gaaaacacattaaactattaaagtagttg 29014832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 166 - 295
Target Start/End: Original strand, 39518422 - 39518551
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacac 265  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  39518422 tttttttttgatgttttaaaacttcaactatatttcaaaacttttgatattttagtgaatttattattgttttctcaagtttatccttgttggaaaacac 39518521  T
Q  266 aataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||| |||| ||||    
T  39518522 aataaactattaaagtagttatgacatttg 39518551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 32839949 - 32840092
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||  |||  ||||||||||||||| || |||||||| |||||| ||||||  |    
T  32839949 tactccctccattcattttctttttatattttagaacttcaactatattttaaattttttgatgttttagtgaa-ttattattattttcttaagtttgtc 32840047  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||    
T  32840048 cttgttagaaaacacaataaactattaaaatagttgtgacatttg 32840092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 49041107 - 49040977
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaaca- 264  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||| |||  ||||| || |||||||||||||| ||||||     
T  49041107 ttttcttttgatgttttagaacttcaactatgttccaaaatatttgatgttttagtatatttaatat--ttttcccacgtttacccttgttgaaaaacaa 49041010  T
Q  265 --caataaactattaaagtagttgtgacctttg 295  Q
      ||  |||||||||||| ||||| ||||||||    
T  49041009 accataaaactattaaaggagttgggacctttg 49040977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 49319347 - 49319416
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 220  Q
    |||| |||||||||||||||||||||||||||||||||| ||||  |||| |||| ||||||||||||||    
T  49319347 tacttcctccattccttttcttttgatgttttagaacttaaacttcattctaaaaattttgatgttttag 49319416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 1351996 - 1352029
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  1351996 tactccctccattccttttcttttgatgttttag 1352029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 18997244 - 18997211
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  18997244 tactccctccattccttttcttttgatgttttag 18997211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 18999783 - 18999750
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  18999783 tactccctccattccttttcttttgatgttttag 18999750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 29014690 - 29014723
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  29014690 tactccctccattccttttcttttgatgttttag 29014723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 36737834 - 36737867
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  36737834 tactccctccattccttttcttttgatgttttag 36737867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 38855594 - 38855561
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  38855594 tactccctccattccttttcttttgatgttttag 38855561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 39518684 - 39518651
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  39518684 tactccctccattccttttcttttgatgttttag 39518651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 39529026 - 39528993
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  39529026 tactccctccattccttttcttttgatgttttag 39528993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 41349371 - 41349404
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  41349371 tactccctccattccttttcttttgatgttttag 41349404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 46879012 - 46878980
Alignment:
Q  151 tactccctccattccttttcttttgatgtttta 183  Q
    |||||||||||||||||||||||||||||||||    
T  46879012 tactccctccattccttttcttttgatgtttta 46878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 837370 - 837455
Alignment:
Q  176 atgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaac 263  Q
    |||||||||||||||||||| |||| |||| ||||||| |||||||| | ||| |||| |||| |||||||||||  ||||| |||||    
T  837370 atgttttagaacttcaactaaattctaaaa-ttttgatattttagtataattaatatt-ttttttcaagtttacctgtgttgaaaaac 837455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 29371537 - 29371571
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  29371537 ctactccctccattcattttcttttgatgttttag 29371571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 32677476 - 32677510
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  32677476 ctactccctccattcattttcttttgatgttttag 32677510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 39806978 - 39807012
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttag 184  Q
    ||||||||| |||||||||||||||||||||||||    
T  39806978 ctactcccttcattccttttcttttgatgttttag 39807012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 34667762 - 34667662
Alignment:
Q  157 ctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgtt 256  Q
    ||||||| | |||||||||||||||||| ||||||||| || | |||||  |||||| |||||| |  |||  |||| |||  |||| ||||||||||||    
T  34667762 ctccatttcgtttcttttgatgttttaggacttcaactttaattcaaaatatttgatcttttagaatgtttgatattttttattcaattttacccttgtt 34667663  T
Q  257 g 257  Q
    |    
T  34667662 g 34667662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 33838006 - 33837862
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  33838006 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 33837907  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33837906 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 33837862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 150 - 295
Target Start/End: Complemental strand, 2509074 - 2508929
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  2509074 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttac 2508975  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  2508974 ccttgttggaaaacacagtaaactattaaagtagttgtgacctttg 2508929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 28378947 - 28379091
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28378947 tactccctccattatttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 28379046  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28379047 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 28379091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 150 - 295
Target Start/End: Complemental strand, 45334554 - 45334409
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  45334554 ctactccctccattccttttcttttgatgttttagaactttaactatattccaaaacttttgatgttttagtgaatttgttattgttttttcaagtttac 45334455  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45334454 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 45334409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 156 - 281
Target Start/End: Complemental strand, 13469777 - 13469652
Alignment:
Q  156 cctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgt 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13469777 cctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatattttagtaaatttataattgttttctcaagtttacccttgt 13469678  T
Q  256 tggaaaacacaataaactattaaagt 281  Q
    ||||||||||||||||||||||||||    
T  13469677 tggaaaacacaataaactattaaagt 13469652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 25106211 - 25106355
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||    
T  25106211 tactctctccattccttttcttttgatgttttagaacttcaactatattccaaaatttttgatgttttagtgaatttatgattgttttttcaagtttacc 25106310  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  25106311 cttgatggaaaacacaataaactattaaagtagttgtgacttttg 25106355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 9739985 - 9740129
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| | |||||||||||| ||||||||||||| |    
T  9739985 tactccctccattccttttcttttgatgttttagaacttcatgtatatttcaaaacttttgatgttttactgaatttattattgctttctcaagtttatc 9740084  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||    
T  9740085 cttgttgaaaaacacaataaactattaaagtagttgtgacatttg 9740129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 38495749 - 38495605
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||    
T  38495749 tacttcctccattctttttcttgtgatgttttagaacttcaactatattctaaaatttttgatgttttggtgaatttattattgttttctcaagtttacc 38495650  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  38495649 cttgttggaaaacacaataaactattaaagtagttatgacatttg 38495605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 151 - 274
Target Start/End: Complemental strand, 27793468 - 27793345
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||     
T  27793468 tactccttccattcattttcttttgatgttttagatcttcaactatattccaaaacttttaatgttttagtgaatttattattgttttctcaagtttact 27793369  T
Q  251 cttgttggaaaacacaataaacta 274  Q
    ||||||||||||||||||||||||    
T  27793368 cttgttggaaaacacaataaacta 27793345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 2626472 - 2626371
Alignment:
Q  195 atattccaaaacttttgatgttttagtaaatttattatt-gttttctcaagtttacccttgttggaaaacacaataaactattaaagtagttgtgacctt 293  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2626472 atattccaaaacttttgatgttttagtgaatttattatttgttttctcaagtttacccttgttggaaaacacaataaactattaaagtaattgtgacctt 2626373  T
Q  294 tg 295  Q
    ||    
T  2626372 tg 2626371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 32183759 - 32183614
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||| |||| ||||| ||||||||||    
T  32183759 tactcccttcattttttttcttttgatgttttagaacttcaactatattccaaaatatttgatgttttagtatatttaatatttttttcccaagtttacc 32183660  T
Q  251 cttgttggaaaacaca--ataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||  |||||||||| ||| ||||| ||||||||    
T  32183659 cttgttggaaaacacaccataaactatt-aaggagttgcgacctttg 32183614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 27024433 - 27024502
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 220  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  27024433 tactccctccattccttttcttttgatgttttagagcttaaactttattccaaaacttttgatgttttag 27024502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 25979036 - 25978969
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgtttt 218  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||| |||||||||||    
T  25979036 tactccctccatttcttttcttttgatgttttaggacttcaactttatttcaaaacatttgatgtttt 25978969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 8235162 - 8235276
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||  ||||||||||||||||||| ||||||| | |||| |||||| ||||||||||||  |  |||| |||| |||  |||| ||||||    
T  8235162 tactccctccatttattttcttttgatgttttaggacttcaattttatttcaaaacatttgatgttttaagatttttaatatt-tttcttcaattttacc 8235260  T
Q  251 cttgttggaaaacaca 266  Q
    ||||||| ||||||||    
T  8235261 cttgttgaaaaacaca 8235276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 3203492 - 3203413
Alignment:
Q  186 acttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacaca 266  Q
    ||||||||||||||  ||||  ||||||||||||||| ||||| |||| |||||||||||||| | |||||| ||||||||    
T  3203492 acttcaactatattttaaaatatttgatgttttagtatatttaatatt-ttttctcaagtttatctttgttgaaaaacaca 3203413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 2626714 - 2626667
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgat 213  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||    
T  2626714 ttttttttttatattttagaacttcaactatattccaaaacttttgat 2626667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 25106488 - 25106455
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  25106488 tactccctccattccttttcttttgatgttttag 25106455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 27027688 - 27027655
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  27027688 tactccctccattccttttcttttgatgttttag 27027655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 28379224 - 28379191
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  28379224 tactccctccattccttttcttttgatgttttag 28379191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 33837729 - 33837762
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  33837729 tactccctccattccttttcttttgatgttttag 33837762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 45334276 - 45334309
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  45334276 tactccctccattccttttcttttgatgttttag 45334309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 9740263 - 9740231
Alignment:
Q  151 tactccctccattccttttcttttgatgtttta 183  Q
    |||||||||||||||||||||||||||||||||    
T  9740263 tactccctccattccttttcttttgatgtttta 9740231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 38495472 - 38495505
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||| |||||||||||||||||||    
T  38495472 tactccctccattcattttcttttgatgttttag 38495505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 13469508 - 13469540
Alignment:
Q  151 tactccctccattccttttcttttgatgtttta 183  Q
    |||||| ||||||||||||||||||||||||||    
T  13469508 tactccttccattccttttcttttgatgtttta 13469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 27312393 - 27312249
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  27312393 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacatttgatgttttagtgaatttattattgttttctcaagtttacc 27312294  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  27312293 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 27312249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 32274434 - 32274578
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  32274434 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 32274533  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32274534 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 32274578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 153 - 295
Target Start/End: Complemental strand, 8504977 - 8504835
Alignment:
Q  153 ctccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttaccct 252  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  8504977 ctccctccattcattttcttttgatgttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttattattattttctcaggtttaccct 8504878  T
Q  253 tgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  8504877 tgttgaaaaacacaataaactattaaagtagttgtgacctttg 8504835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 158 - 295
Target Start/End: Original strand, 5003889 - 5004026
Alignment:
Q  158 tccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttg 257  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5003889 tccattcatttttttttgatgttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttattattgttttctcaagtttacccttgttg 5003988  T
Q  258 gaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  5003989 gaaaacacaataaactattaaagtagttttgacatttg 5004026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 29452820 - 29452675
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttatta-ttgttttctcaagtttac 249  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||| |||  | ||||||||||||| ||||||||| ||||||||||||||||||    
T  29452820 tactccctccatttcttttcttctgatgttttagaacttcaactatattctaaatttcttgatgttttagtgaatttattacttgttttctcaagtttac 29452721  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
     ||||||||||||||| ||||||||||||| |||||||||||||||    
T  29452720 acttgttggaaaacaccataaactattaaaatagttgtgacctttg 29452675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 151 - 253
Target Start/End: Original strand, 12174700 - 12174802
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12174700 tactccctccattccttttcttttaatgttttagaactttaaatatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 12174799  T
Q  251 ctt 253  Q
    |||    
T  12174800 ctt 12174802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 31171267 - 31171123
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||| |||||||||||||| ||||||| ||||| | ||||||||||| || |||||| |||| |||||||||||||||||||||||||| |    
T  31171267 tactccctccatttcttttcttttgatgatttagaaattcaaatgtattccaaaacattagatgttgtagtgaatttattattgttttctcaagtttatc 31171168  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
     || |||||||||||  |||||||||||| |||||||||||||||    
T  31171167 tttattggaaaacaccttaaactattaaaatagttgtgacctttg 31171123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 18741947 - 18742062
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||| ||||| |||||| ||||||| ||||||    
T  18741947 tactccctccatttcttttcttttgatgttttaggacttcaactttatttcaaaacatttgatgttttagtatatttaatattgtattctcaaatttacc 18742046  T
Q  251 cttgttggaaaacaca 266  Q
    ||||||| ||||||||    
T  18742047 cttgttgaaaaacaca 18742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 2543142 - 2543225
Alignment:
Q  212 atgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  2543142 atgttttagtgaatttattattgttttctcaagtttacccttgttgaaaaacacaataaactattaaagtagttgtgacatttg 2543225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 7156502 - 7156370
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||| |||||||||||||||||||||   ||||||||||||||||||||| ||||||||||| ||||||||||||||||                
T  7156502 tactccctccatttcttttcttttgatgttttagacaatcaactatattccaaaactttagatgttttagtgaatttattattgtttt------------ 7156415  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||    
T  7156414 cttgttggaaaacaccataaactattaaagtaattgtgacatttg 7156370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 29302549 - 29302500
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatatt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29302549 ctactccctccattccttttcttttgatgttttagaacttcaactatatt 29302500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 8504732 - 8504766
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||||||||||||||||||||||||    
T  8504732 ctactccctccattccttttcttttgatgttttag 8504766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 27312114 - 27312147
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  27312114 tactccctccattccttttcttttgatgttttag 27312147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 32274712 - 32274678
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  32274712 ctactccctccattcattttcttttgatgttttag 32274678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 2543358 - 2543325
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||| |||||||||||||||||||    
T  2543358 tactccctccattcgttttcttttgatgttttag 2543325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 18742223 - 18742191
Alignment:
Q  151 tactccctccattccttttcttttgatgtttta 183  Q
    ||||||||||||| |||||||||||||||||||    
T  18742223 tactccctccatttcttttcttttgatgtttta 18742191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 12399223 - 12399079
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  12399223 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 12399124  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12399123 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 12399079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 34208538 - 34208682
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  34208538 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 34208637  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34208638 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 34208682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 29874954 - 29875098
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  29874954 tactccctccattctttttcttttgatgttttagaacttcaactatattccaaaacatttgatgttttagtgaatttattattgttttctcaagtttacc 29875053  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29875054 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 29875098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 23090298 - 23090442
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||    
T  23090298 tactccctccattccttttcttttgatgttttagaacttcaactgtattccaaaatttttgatgttttagtgaatttgttattgttttctcaagtttacc 23090397  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23090398 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 23090442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 4145694 - 4145838
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  4145694 tactcgctccattccttttcttttgatgttttagaactttaactatattccaaaacttttgatgttttagtgaatttgttattgttttcttaagtttacc 4145793  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4145794 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 4145838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 4695439 - 4695295
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  4695439 tactcccttcattccttttcttttgattttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 4695340  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  4695339 cttgttggaaaacacaataaactattaaagtagttgtgacatttg 4695295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 151 - 290
Target Start/End: Original strand, 3077597 - 3077736
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||||||| |    
T  3077597 tactccctccattcattttcttttgatgttttagaatttcaactatattttaaaacttttgatgttttagtgaatttgttattgttttctcaagtttatc 3077696  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgac 290  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3077697 cttgttggaaaacacaataaactattaaagtagttgtgac 3077736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 42758072 - 42757953
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacac 265  Q
    |||| |||| ||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  42758072 ttttttttttatgttttagaacttcaactatttttcaaaacttttgatgttttagtgaatttattattgttttctcaagtttatccttgttggaaaacac 42757973  T
Q  266 aataaactattaaagtagtt 285  Q
     |||||||||||||||||||    
T  42757972 gataaactattaaagtagtt 42757953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 22646121 - 22646042
Alignment:
Q  216 tttagtaaatttattattgttttctcaagtttacccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| ||||    
T  22646121 tttagtgaatttattattgttttctcaagtttaaccttgttgaaaaacaccataaactattaaagtagttgtgacttttg 22646042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 266
Target Start/End: Complemental strand, 12096466 - 12096365
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagta-aatttattattgttttctcaagtttacccttgttggaaaaca 264  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || | |||| |||| ||||||||||| ||| ||||||| ||||||    
T  12096466 ttttcttttgatgttttaggacttcaactatattccaaaacatttgatgttttaatatattttaatattcttttctcaagtgtactcttgttgaaaaaca 12096367  T
Q  265 ca 266  Q
    ||    
T  12096366 ca 12096365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 150 - 266
Target Start/End: Complemental strand, 41610695 - 41610579
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || |||| || | |||   ||| |||||    
T  41610695 ctactctctccatttcttttcttttgatgttttagaacttaaactttattccaaaacttttgatgttttagaaattttaatactttttatccaattttac 41610596  T
Q  250 ccttgttggaaaacaca 266  Q
    |||||||  ||||||||    
T  41610595 ccttgttaaaaaacaca 41610579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 42793040 - 42793109
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 220  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  42793040 tactcactccattccttttcttttgatgttttagagcttaaactttattccaaaacttttgatgttttag 42793109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 4434783 - 4434847
Alignment:
Q  154 tccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgtttt 218  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||| ||| |  |||||||||||    
T  4434783 tccctccatttcttttcttttgatgttttaggacttcaactttatttcaagatatttgatgtttt 4434847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 22528023 - 22528149
Alignment:
Q  172 tttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacaca--at- 268  Q
    |||||| |||||| ||||||| |||| |||||||  ||||||||||||||| ||||| || | || |  ||| |||||| |||||| ||||||||  ||     
T  22528023 tttgatattttaggacttcaattatactccaaaatatttgatgttttagtacatttaataattttattccaaatttacctttgttgaaaaacacaccata 22528122  T
Q  269 aaactattaaagtagttgtgacctttg 295  Q
    |||||||||||  ||||||||||||||    
T  22528123 aaactattaaaagagttgtgacctttg 22528149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 12398946 - 12398979
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  12398946 tactccctccattccttttcttttgatgttttag 12398979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 29875231 - 29875198
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  29875231 tactccctccattccttttcttttgatgttttag 29875198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 42757805 - 42757838
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  42757805 tactccctccattccttttcttttgatgttttag 42757838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 42793595 - 42793562
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  42793595 tactccctccattccttttcttttgatgttttag 42793562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 23090575 - 23090543
Alignment:
Q  151 tactccctccattccttttcttttgatgtttta 183  Q
    |||||||||||||||||||||||||||||||||    
T  23090575 tactccctccattccttttcttttgatgtttta 23090543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 41610373 - 41610405
Alignment:
Q  151 tactccctccattccttttcttttgatgtttta 183  Q
    |||||||||||||||||||||||||||||||||    
T  41610373 tactccctccattccttttcttttgatgtttta 41610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 19574686 - 19574795
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||  || |||||||||||||||| ||||||| || ||| |||||  ||| |||||||| || ||||| |||| ||||| |||| | |||    
T  19574686 tactccctccattt-ttgtcttttgatgttttaggacttcaattaaatttcaaaatatttaatgttttaatatatttaatatt-ttttcccaaggtcacc 19574783  T
Q  251 cttgttggaaaa 262  Q
    ||||||| ||||    
T  19574784 cttgttgaaaaa 19574795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 200
Target Start/End: Complemental strand, 594362 - 594328
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattc 200  Q
    |||||||||||||||||| ||||||||||||||||    
T  594362 ttttcttttgatgttttaaaacttcaactatattc 594328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 8718028 - 8718094
Alignment:
Q  154 tccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 220  Q
    |||||||||| ||||||||||||| |||||  | ||||||| |||| |||||  |||||||||||||    
T  8718028 tccctccatttcttttcttttgatattttaagatttcaactttatttcaaaatatttgatgttttag 8718094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 34208815 - 34208782
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||| ||||||||||||||    
T  34208815 tactccctccattcctttttttttgatgttttag 34208782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 4e-69; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 47669119 - 47669263
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||    
T  47669119 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaatttttgatgttttagtgaatttgttattgttttctcaagtttacc 47669218  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  47669219 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 47669263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 151 - 294
Target Start/End: Original strand, 46220259 - 46220402
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  46220259 tactccctctattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 46220358  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgaccttt 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  46220359 cttgttggaaaacacaataaactattaaagtagttgtgaccttt 46220402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 10737978 - 10737834
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10737978 tactcccttcattccttttcttttaatgttttagaacttcaactatattctaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 10737879  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10737878 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 10737834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 4817269 - 4817407
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  4817269 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttatcattgttttctcaagtttacc 4817368  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtga 289  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  4817369 cttgttggaaaacacaataaactattaaggtagttgtga 4817407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 9831503 - 9831647
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  9831503 tactccctccattccttttcttttgatgttttagaatttcaactatattccaaaacttttgatgttttagtgaatttgttattattttctcaagtttacc 9831602  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  9831603 cttgttggaaaacacaataaactattaaaatagttgtgacctttg 9831647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 18126851 - 18126994
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18126851 tactccctccattccttttcttttgatgttttagaacttcaactatattctaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 18126950  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||    
T  18126951 cttgttggaaaacacaacaaactatt-aagtagttgtgacttttg 18126994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 3384870 - 3384728
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3384870 tactcccttcattctttttcttttgatgttttagaacctcaactattt--caaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 3384773  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3384772 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 3384728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 4055484 - 4055620
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  4055484 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaattaattattgttttctcaagtttacc 4055583  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgt 287  Q
    ||| ||||||||||||||  ||| |||||||||||||    
T  4055584 cttattggaaaacacaattcactgttaaagtagttgt 4055620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 48564818 - 48564961
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  48564818 tactccctccattacttttcttt-gatgttttaaaacttcaactatattccaaaaattttgatgttttagtgaatttattattgttttctcaagtttacc 48564916  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  48564917 cttgatggaaaacacaataaactattaaagtagttgtgacttttg 48564961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 166 - 290
Target Start/End: Original strand, 8889457 - 8889581
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacac 265  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  8889457 ttttttttttatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacccttgttgaaaaacac 8889556  T
Q  266 aataaactattaaagtagttgtgac 290  Q
    |||||||||||||||||||||||||    
T  8889557 aataaactattaaagtagttgtgac 8889581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 152 - 295
Target Start/End: Original strand, 7414208 - 7414351
Alignment:
Q  152 actccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttaccc 251  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||  |||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  7414208 actccctccattcatttttttttgatgttttagaacttcaactatattttaaattttttgatgttttagtgaatttattattgttttctcaagtttaccc 7414307  T
Q  252 ttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||| |||||||||||||||||||||||||||||||| ||||    
T  7414308 ttgttgaaaaacacaataaactattaaagtagttgtgacatttg 7414351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 1236308 - 1236205
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  1236308 ctactccctccattcattttcttttgatgttttagaactttaactatattccaaaacttttgatggtttagtgaatttattattgttttctcaagtttac 1236209  T
Q  250 cctt 253  Q
    ||||    
T  1236208 cctt 1236205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 39241172 - 39241296
Alignment:
Q  171 ttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaag-tttacccttgttggaaaacacaata 269  Q
    |||| ||||||||||| |||||||||||| ||||||||||| ||||| ||| |||||||||||||| | ||||| ||||| ||||||| ||||||| |||    
T  39241172 ttttaatgttttagaa-ttcaactatatttcaaaacttttgttgtttcagtgaatttattattgttgtatcaagttttactcttgttgaaaaacaccata 39241270  T
Q  270 aactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||| ||||    
T  39241271 aactattaaagtagttgtgacttttg 39241296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 1749600 - 1749521
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttatt 230  Q
    |||| |||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||    
T  1749600 tacttcctctattccttttcttttgatgttttagaactttaattatataccaaaacttttgatgttttagtgaatttatt 1749521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 33020206 - 33020275
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 220  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||||||    
T  33020206 tactccctccattccttttcttttgatgttttagagcttaaacttttttccaaaacttttgatgttttag 33020275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 26842462 - 26842552
Alignment:
Q  174 tgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacaca 266  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||| ||||| |||  |||| ||||||||| |||||||| ||||||||    
T  26842462 tgatgttttagaacttcaactatatttcaaaatatttgatgttttagtatatttaatat--ttttttcaagtttatccttgttgaaaaacaca 26842552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 266
Target Start/End: Complemental strand, 33846935 - 33846820
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaattt-attattgttttctcaagtttac 249  Q
    |||||||||||||  ||||||||||||||||||  ||||||| | ||||  ||||  |||||||||| |||| |||| ||| || ||| |||||||||||    
T  33846935 tactccctccattt-ttttcttttgatgttttaagacttcaagtgtattttaaaatatttgatgtttcagtatatttaatttttttttcctcaagtttac 33846837  T
Q  250 ccttgttggaaaacaca 266  Q
    |||||||  ||||||||    
T  33846836 ccttgttaaaaaacaca 33846820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 33947043 - 33947158
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaattt-attattgttttctcaagtttac 249  Q
    |||||||||||||  ||||||||||||||||||  ||||||| | ||||  ||||  |||||||||| |||| |||| ||| || ||| |||||||||||    
T  33947043 tactccctccattt-ttttcttttgatgttttaagacttcaagtgtattttaaaatatttgatgtttcagtatatttaatttttttttcctcaagtttac 33947141  T
Q  250 ccttgttggaaaacaca 266  Q
    |||||||  ||||||||    
T  33947142 ccttgttaaaaaacaca 33947158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 37875849 - 37875920
Alignment:
Q  208 tttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacacaataaactattaaa 279  Q
    ||||||||||||||| ||||| | ||||||||||||||||| |||||||| |||| |||  | |||||||||    
T  37875849 tttgatgttttagtatatttaatgttgttttctcaagtttatccttgttgaaaaatacaccatactattaaa 37875920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 47669397 - 47669363
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||||||||||||||||||||||||    
T  47669397 ctactccctccattccttttcttttgatgttttag 47669363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 10737701 - 10737734
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  10737701 tactccctccattccttttcttttgatgttttag 10737734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 46220536 - 46220503
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  46220536 tactccctccattccttttcttttgatgttttag 46220503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 1236071 - 1236103
Alignment:
Q  152 actccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||||||||||||||||||||||    
T  1236071 actccctccattccttttcttttgatgttttag 1236103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 182
Target Start/End: Complemental strand, 48565094 - 48565063
Alignment:
Q  151 tactccctccattccttttcttttgatgtttt 182  Q
    ||||||||||||||||||||||||||||||||    
T  48565094 tactccctccattccttttcttttgatgtttt 48565063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 266
Target Start/End: Complemental strand, 49112535 - 49112439
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacac 265  Q
    |||||||||||||||    ||||| |||||||||  ||||  ||||||||||||||| |||||  ||||||||   || ||||||||||||| |||||||    
T  49112535 ttttcttttgatgtt----aactttaactatattttaaaatatttgatgttttagtatatttaacattgtttttctaaatttacccttgttgaaaaacac 49112440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 8889721 - 8889687
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||||||||| ||||||||||||||    
T  8889721 ctactccctccattccttttattttgatgttttag 8889687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 184
Target Start/End: Complemental strand, 9831777 - 9831747
Alignment:
Q  154 tccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||||||||||||||||||||    
T  9831777 tccctccattccttttcttttgatgttttag 9831747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 33023461 - 33023428
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||||||||||||||| |||||||    
T  33023461 tactccctccattccttttcttttgacgttttag 33023428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 37875727 - 37875760
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||| ||||||||||||||||||||    
T  37875727 tactccctccatttcttttcttttgatgttttag 37875760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 6e-68; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 153 - 295
Target Start/End: Original strand, 15233757 - 15233899
Alignment:
Q  153 ctccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttaccct 252  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  15233757 ctccctctattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttaccct 15233856  T
Q  253 tgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15233857 tgttggaaaacacaataaactattaaagtagttgtgacctttg 15233899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 43041126 - 43040982
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  43041126 tactccctccattccttttcttttgatgttttaaaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaattttacc 43041027  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  43041026 cttgttggaaaacaccataaactattaaagtagttgtgacctttg 43040982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 35793183 - 35793040
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  35793183 tactccctccattctttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagagaatttattattgtttt-tcaagtttacc 35793085  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  35793084 cttgttggaaaacacaataaactattaaagtagttgtgacatttg 35793040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 41252415 - 41252559
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |    
T  41252415 tactccctccattccttttctttttatgttttagaacttcaaatatattccaaaacttttgatgttttagtgaatttattattgtgttctcaagtttatc 41252514  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  41252515 cttgttggaaaatacaataaactattaaagtagttgtgacatttg 41252559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 31296083 - 31296221
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  31296083 tactccttccattctttttcttttgatgttttagaacttcaactatattctaaaacttttgatgttttagtgaatttattattgttttctcaaatttacc 31296182  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtga 289  Q
     |||||| |||||||||||||||||||||||||||||||    
T  31296183 tttgttgaaaaacacaataaactattaaagtagttgtga 31296221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 44104833 - 44104683
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  44104833 tactccctccgttccttttcttttgatgttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttattattattttctcaagtttacc 44104734  T
Q  251 c-------ttgttggaaaacacaataaactattaaagtagttgtgaccttt 294  Q
    |       ||||||||||||||||||||||||||| |||||||||||||||    
T  44104733 cttataaattgttggaaaacacaataaactattaaggtagttgtgaccttt 44104683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 41642891 - 41643038
Alignment:
Q  151 tactccctccattccttttcttttgatgtttt-agaacttcaactata--ttccaaaacttttgatgttttagtaaatttattattgttttctcaagttt 247  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41642891 tactccctccatttcttttcttttgatgtttttagaatttcaactatatattccaaaacttttgatgttttagtgaatttattattgttttctcaagttt 41642990  T
Q  248 acccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||| ||  |||||||||| |||||||||||||||||||||||||||||    
T  41642991 accttttctggaaaacaccataaactattaaagtagttgtgacctttg 41643038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 31903641 - 31903513
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacac 265  Q
    |||| |||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  31903641 tttttttttgatgttttagaacttcaaatatattccaaattttttgatgttttagtaaatttattattgttttatc-agtttacccttattggaaaacac 31903543  T
Q  266 aataaactattaaagtagttgtgacctttg 295  Q
     |||||||||||||||||||||||||||||    
T  31903542 cataaactattaaagtagttgtgacctttg 31903513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 10118729 - 10118660
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 220  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||||||||||    
T  10118729 tactccctccattccttttcttttgatattttagagcttaaactttattccaaaacttttgatgttttag 10118660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 288
Target Start/End: Original strand, 21727684 - 21727809
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttg--gaaaac 263  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||| |  || |||| ||| | ||| |||||||||||||   |||||    
T  21727684 ttttcttttgatgttttagaacttcaactatatttcaaaatatttgatgttttggtataactaatattttttccccaaatttacccttgttgaaaaaaac 21727783  T
Q  264 acaat-aaactattaaagtagttgtg 288  Q
    ||||| |||||||||||| |||||||    
T  21727784 acaataaaactattaaaggagttgtg 21727809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 10112339 - 10112372
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  10112339 tactccctccattccttttcttttgatgttttag 10112372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 15234032 - 15233999
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  15234032 tactccctccattccttttcttttgatgttttag 15233999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 36963131 - 36963200
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 220  Q
    ||||| ||| |||||||||||||| ||||||||||| || |||| |||| |||||  |||||||||||||    
T  36963131 tactcgctctattccttttcttttaatgttttagaatttaaactttatttcaaaaaatttgatgttttag 36963200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 43040849 - 43040882
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||||||||||||||||||||||    
T  43040849 tactccctccattccttttcttttgatgttttag 43040882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 44104546 - 44104578
Alignment:
Q  151 tactccctccattccttttcttttgatgtttta 183  Q
    |||||||||||||||||||||||||||||||||    
T  44104546 tactccctccattccttttcttttgatgtttta 44104578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 45590742 - 45590886
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  45590742 tactccctccattcattttcttttgatgttttagaacttcaactatattctaaaacttttgatgttttagtgaattcattattgttttatcaagtttacc 45590841  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  45590842 tttgttggaaaacacaataaactattaaagtagttgtgacctttg 45590886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 8956053 - 8955909
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  8956053 tactccctccattcctttttttttgatgttttagaacttcaactatattacaaaacttttgatgttttagtgaatttgttattgttttatcaagtttacc 8955954  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||    
T  8955953 cttattggaaaacacaataaattattaaagtagttgtgacctttg 8955909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 295
Target Start/End: Original strand, 34334342 - 34334476
Alignment:
Q  161 attccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaa 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||    
T  34334342 attccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgctttagtgaatttattattgtcttctcaagtttacccttgttgaaa 34334441  T
Q  261 aacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||||||||||||| |||||    
T  34334442 aacacaataaactattaaagtagttgtgatctttg 34334476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 33288682 - 33288538
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33288682 tactccctccatttcttttcttttgatattttagaacttcaattatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 33288583  T
Q  251 cttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    | ||||||||||||||||| |||  ||||||||||||||| ||||    
T  33288582 catgttggaaaacacaatatactgataaagtagttgtgacatttg 33288538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 157 - 295
Target Start/End: Original strand, 49162108 - 49162245
Alignment:
Q  157 ctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgtt 256  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||    
T  49162108 ctccattcattttcttttgatgtttcagaacttcaactatattccaaaatttttgatgttttagtgaatttattattgttttctcaatttta-ccttgtt 49162206  T
Q  257 ggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  49162207 ggaaaacaccataaactattaaagtagttgtaacctttg 49162245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 18835705 - 18835851
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagt--aaatttattattgttttctcaagttta 248  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | || ||||||||||||||||| ||||    
T  18835705 tactcccttcatttattttcttttgatgttttagaacttcaactatattccaaaactttcgatgttttagtgaatatatattattgttttctcaaattta 18835804  T
Q  249 cccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
     ||||||| |||||||  |||||||||||||||||||||||| ||||    
T  18835805 tccttgttagaaaacatcataaactattaaagtagttgtgacatttg 18835851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 30469445 - 30469353
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaa 243  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30469445 tactcccttcattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaa 30469353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 39481906 - 39482002
Alignment:
Q  154 tccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacc 250  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39481906 tccctccatttcttttcttttgatgttttagaacttcaactattttccaaaacttttgatgttttagtaaatttattattgttttctcaggtttacc 39482002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 50774325 - 50774191
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatg-----ttttagtaaatttattattgttttctcaagtttacccttgttggaa 260  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||||      ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  50774325 tttttttttgatgttttagaactttaactatatttcaaaacttttgatacagtattttagtgaatttattattgttttctcaagtttactcttgttggaa 50774226  T
Q  261 aacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||||||||||||||||| |||| ||||| ||||    
T  50774225 aacacaataaactattaaattagtcgtgacttttg 50774191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 36971115 - 36971192
Alignment:
Q  217 ttagtaaatttattattgttttctcaagtttacccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  36971115 ttagtgaatttattattgttttctgaagtttacc-ttgttggaaaacacaataaactattaaaatagttgtgacctttg 36971192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 19256186 - 19256255
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 220  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  19256186 tactccctccattccttttcttttgatgttttagagcttaaactttattccaaaacttttgatgttttag 19256255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 266
Target Start/End: Complemental strand, 26025784 - 26025685
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacac 265  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||  |||||||| ||||| |||| ||||| ||||||||||||||||| |||||||    
T  26025784 ttttcttttgatgttttaggacttcaactatattccaaaatatttgacattttagtatatttaatatt-ttttcccaagtttacccttgttgaaaaacac 26025686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 34862493 - 34862442
Alignment:
Q  103 tatatttgaatcaaagtgcatcccgaccaaattttagctggtgttagctact 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34862493 tatatttgaatcaaagtgcatcccgaccaaattttagctggtgttagctact 34862442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 36016279 - 36016329
Alignment:
Q  151 tactccctccattccttttcttttgatgttttagaacttcaactatattcc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36016279 tactccctccattccttttcttttgatgttttagaacttcaactatattcc 36016329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 36968353 - 36968407
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36968353 tttttttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 36968407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 33109163 - 33109031
Alignment:
Q  166 ttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttacccttgttggaaaacac 265  Q
    ||||||||| ||||||||| ||||||||||||||  ||||   |||||||||||||| ||||| |||| |||||| ||||||| |||||||  |||||||    
T  33109163 ttttcttttaatgttttaggacttcaactatattttaaaataattgatgttttagtatatttaatatttttttcttaagtttatccttgttaaaaaacac 33109064  T
Q  266 a--at-aaactattaaagtagttgtgacctttg 295  Q
    |  || |||||||||||  ||||||||||||||    
T  33109063 accataaaactattaaatgagttgtgacctttg 33109031  T

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Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 19257138 - 19257103
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttaga 185  Q
    ||||||||||||||||||||||||||||||||||||    
T  19257138 ctactccctccattccttttcttttgatgttttaga 19257103  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 184
Target Start/End: Original strand, 8955779 - 8955809
Alignment:
Q  154 tccctccattccttttcttttgatgttttag 184  Q
    |||||||||||||||||||||||||||||||    
T  8955779 tccctccattccttttcttttgatgttttag 8955809  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 45591020 - 45590986
Alignment:
Q  150 ctactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  45591020 ctactccctccattcattttcttttgatgttttag 45590986  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 49162365 - 49162332
Alignment:
Q  151 tactccctccattccttttcttttgatgttttag 184  Q
    ||||||||||||||| ||||||||||||||||||    
T  49162365 tactccctccattccctttcttttgatgttttag 49162332  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 39482138 - 39482106
Alignment:
Q  152 actccctccattccttttcttttgatgttttag 184  Q
    |||||||||||| ||||||||||||||||||||    
T  39482138 actccctccatttcttttcttttgatgttttag 39482106  T

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Target: scaffold0103 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 44619 - 44764
Alignment:
Q  151 tactccctccattccttttcttt-tgatgttttagaacttcaactatattccaaaacttttgatgttttagtaaatttattattgttttctcaagtttac 249  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  44619 tactcccttcattccttttctttctgatgtttgagaacttcaactatattccaaaacttttgaggttttagtgaatttattattgttttctcaagtttac 44718  T
Q  250 ccttgttggaaaacacaataaactattaaagtagttgtgacctttg 295  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  44719 ccttgttgaaaaacacaataaactattaaagtagttgtgacctttg 44764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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