View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11681_low_12 (Length: 243)
Name: NF11681_low_12
Description: NF11681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11681_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 48091862 - 48092075
Alignment:
| Q |
1 |
gaatccagtttgtaagtgaaattcttatcttagtgtatttttgaattgacattgtgattttgtcaaactcacgcacgggtctaattcaaacatacattaa |
100 |
Q |
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| T |
48091862 |
gaatccagtttgtaagtgaaattcttatcttagtgtatttttgaattgacattgtgattttgtcaaactcacgcacgggtctaattcaaac--------- |
48091952 |
T |
|
| Q |
101 |
atatatacattttaatttga---tcatgacatgatctactatgtattacaattaattgcagataaacataattagaatatttaggcaattggagtatttt |
197 |
Q |
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| T |
48091953 |
----atacattttaatttgatattcatgacatgat---ctatgtattacaattaattgcagataaacataattagaatatttaggcaattggagtatttt |
48092045 |
T |
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| Q |
198 |
caacaataccagcagagagtgagtggtctt |
227 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
48092046 |
caacaataccagcagagagtgagtggtctt |
48092075 |
T |
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