View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11683_high_7 (Length: 257)
Name: NF11683_high_7
Description: NF11683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11683_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 33276993 - 33277238
Alignment:
| Q |
1 |
aaagagtttgctgagaaattgaaccgtgatgcacaagaacaactttctgggtttgatttgaataaagctgctcctttgattgctttggctaattacattg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
33276993 |
aaagagtttgctgagaaattgaaccgtgatgcacaagaacaactttctgggtttgatttgaataaatctgctcctttgattgctttggctaattacattg |
33277092 |
T |
|
| Q |
101 |
cttataggcaaaactagatttgttttgtttattgttgtaatcttaaattattaaacagtttaggagatttagatttgtttatctattggggaatgtataa |
200 |
Q |
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|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33277093 |
cttataggcaaaactagatt-gttttgtttattgttgtaatgttaaattattaaacagtttaggagatttagatttgtttatctattggggaatgtataa |
33277191 |
T |
|
| Q |
201 |
aataattgttgaattatttccccttttcaatgtgtttttgcgttcat |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
33277192 |
aataattgttgaattatttccccttttcaatgtgtttttgtgttcat |
33277238 |
T |
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