View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11686_low_17 (Length: 298)
Name: NF11686_low_17
Description: NF11686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11686_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 37655698 - 37655415
Alignment:
| Q |
1 |
atcgatctcagatctgagatcgataacaggaaagttagaaataggagatgacgttgatggcattgatggaggatctatcacgcttcaagagtttattgag |
100 |
Q |
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| T |
37655698 |
atcgatctcagatctgagatcgataacaggaaagttagaaataggagatgacgttgatggcattgatggaggatctatcacgcttcaagagtttattgag |
37655599 |
T |
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| Q |
101 |
ctaagcacaacaagctatgaatctgaagaggaaatagaaaacctaaagagcacgttttctgtgtatgacattgatggcgatggtttcatcacagcgaagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37655598 |
ctaagcacaacaagctatgaatctgaagaggaaatagaaaacctaaagagcacgttttctgtgtatgacattgatggcgatggtttcatcacggcgaagg |
37655499 |
T |
|
| Q |
201 |
agcttaacacgcttatgagaagcattggtcaagagtgttccttggatgaatgtgaaagaattattggtcgcgttgatagtgatg |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37655498 |
agcttaacacgcttatgagaagcattggtcaagagtgttccttggatgaatgtgaaagaattattggtcgcgttgatagtgatg |
37655415 |
T |
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