View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11686_low_5 (Length: 603)
Name: NF11686_low_5
Description: NF11686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11686_low_5 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 411; Significance: 0; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 5 - 443
Target Start/End: Complemental strand, 2866288 - 2865850
Alignment:
| Q |
5 |
caacatgtgttggaccaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggtggatctcaggatggagtc |
104 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| |
|
|
| T |
2866288 |
caacatgtgttggaccaaggaaaggctgttatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggtggatgtcggggtggagtc |
2866189 |
T |
|
| Q |
105 |
acacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttattaaattcaagaaagggaa |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2866188 |
acacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttgttaaattcaagaaagggaa |
2866089 |
T |
|
| Q |
205 |
agagtattatgctaaagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaat |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2866088 |
agagtattatgctaaagttggaaaggcttggaaacgcggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaat |
2865989 |
T |
|
| Q |
305 |
ttcatgaactacgatgtatatgatcttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatcagttatcg |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2865988 |
ttcatgaactacgatgtatatgatcttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatcagttatcg |
2865889 |
T |
|
| Q |
405 |
ttattgaagatattgattgttctctcgagcttaccggtc |
443 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2865888 |
ttattgaagatattgattgttctcttgagcttaccggtc |
2865850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 5 - 443
Target Start/End: Complemental strand, 2860909 - 2860471
Alignment:
| Q |
5 |
caacatgtgttggaccaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggtggatctcaggatggagtc |
104 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
2860909 |
caacatgtgttggaacaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggtggatgtcagggtggagtc |
2860810 |
T |
|
| Q |
105 |
acacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttattaaattcaagaaagggaa |
204 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2860809 |
acacaaattttgcacaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttgttaaattcaagaaagggaa |
2860710 |
T |
|
| Q |
205 |
agagtattatgctaaagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaat |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2860709 |
agagtattatgctaaagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaat |
2860610 |
T |
|
| Q |
305 |
ttcatgaactacgatgtatatgatcttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatcagttatcg |
404 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2860609 |
ttcatgaactacgacgtgtatgatcttgaattaacaactgtcaaggataacaatgagttaaaaagacttttgattgagacgtcgagcaaatcagttatcg |
2860510 |
T |
|
| Q |
405 |
ttattgaagatattgattgttctctcgagcttaccggtc |
443 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2860509 |
ttattgaagatattgattgttctctcgagcttaccggtc |
2860471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 5 - 443
Target Start/End: Complemental strand, 2885478 - 2885040
Alignment:
| Q |
5 |
caacatgtgttggaccaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggtggatctcaggatggagtc |
104 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| || || ||||||| |
|
|
| T |
2885478 |
caacatgtgttggaacaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaatggtggttgttggtggatgtcggggtggagtc |
2885379 |
T |
|
| Q |
105 |
acacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttattaaattcaagaaagggaa |
204 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2885378 |
acacaaattttgcacaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttgttaaattcaagaaagggaa |
2885279 |
T |
|
| Q |
205 |
agagtattatgctaaagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaat |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
2885278 |
agagtattatgctaaagttggaaaggcttggaaacggggttatctactttatggtccaccaggaactgggaaatctaccatgatatcggctattgcaaat |
2885179 |
T |
|
| Q |
305 |
ttcatgaactacgatgtatatgatcttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatcagttatcg |
404 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2885178 |
ttcatgaactacgatgtatatgatctagaattaaccactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcaagcaaatcagttatcg |
2885079 |
T |
|
| Q |
405 |
ttattgaagatattgattgttctctcgagcttaccggtc |
443 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2885078 |
ttattgaagatattgattgttctctcgagcttactggtc |
2885040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 98 - 429
Target Start/End: Complemental strand, 2910231 - 2909900
Alignment:
| Q |
98 |
tggagtcacacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttattaaattcaaga |
197 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
2910231 |
tggagtcacacaacttttgagcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaggaagagatcataaacgatcttgttaaattcaaga |
2910132 |
T |
|
| Q |
198 |
aagggaaagagtattatgctaaagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctat |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
2910131 |
aagggaaagagtattatgctaaagttggaaaggcgtggaaacgtggttatctagtttatggtccaccaggaaccggaaaatctaccatgatatctgctat |
2910032 |
T |
|
| Q |
298 |
tgcaaatttcatgaactacgatgtatatgatcttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatca |
397 |
Q |
| |
|
||| |||||||||||||| || || ||||||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
2910031 |
tgcgaatttcatgaactatgacgtttatgatcttcaattaacaattgtcaaggataactatgagttgaaaagacttttgattgagacatcgagtaaatcg |
2909932 |
T |
|
| Q |
398 |
gttatcgttattgaagatattgattgttctct |
429 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| |
|
|
| T |
2909931 |
attatagttattgacgatattgattgttctct |
2909900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 98 - 441
Target Start/End: Original strand, 2842113 - 2842456
Alignment:
| Q |
98 |
tggagtcacacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttattaaattcaaga |
197 |
Q |
| |
|
||||||||||||| ||||| |||||| ||||| ||||||||||||||| ||||||| | |||||||||||||| |||| |||||| |||||||||||| |
|
|
| T |
2842113 |
tggagtcacacaacttttgagcacccggcaagttttgaaacacttgctttggaaccaaaaaagaaagaagagattctaaatgatcttgttaaattcaaga |
2842212 |
T |
|
| Q |
198 |
aagggaaagagtattatgctaaagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctat |
297 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | |||||| |||||||| || ||||||||||||||||| ||||| |
|
|
| T |
2842213 |
aagggaaagagtattatgctaaagttggaaaagcttggaaacgtggttatctactttttggtcctccaggaaccggtaaatctaccatgatatcggctat |
2842312 |
T |
|
| Q |
298 |
tgcaaatttcatgaactacgatgtatatgatcttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatca |
397 |
Q |
| |
|
||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
2842313 |
tgctaatttcatgaactatgatgtgtatgatcttgaattaacaattgtcaaggataacaatgagttgaaaagacttttgattgagacgtcgagtaaatcg |
2842412 |
T |
|
| Q |
398 |
gttatcgttattgaagatattgattgttctctcgagcttaccgg |
441 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
2842413 |
attattgttattgaagatattgattgttctctcgatctcaccgg |
2842456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 98 - 432
Target Start/End: Complemental strand, 2833507 - 2833173
Alignment:
| Q |
98 |
tggagtcacacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttattaaattcaaga |
197 |
Q |
| |
|
|||| |||||||| ||||| ||| |||||||| |||| ||| || ||||||||||| || |||||| ||||||| |||| |||||| |||| ||||||| |
|
|
| T |
2833507 |
tggaatcacacaacttttgagcatcctgcaagatttggaaccctagctatggaaccagaaaagaaacaagagattttaaatgatcttcttaagttcaaga |
2833408 |
T |
|
| Q |
198 |
aagggaaagagtattatgctaaagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctat |
297 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
2833407 |
aaggtaaagagtattatgctaaagttggaaaggcttggaaacgtggttatctactttatggtcctccaggaactggaaaatctactatgatatcagctat |
2833308 |
T |
|
| Q |
298 |
tgcaaatttcatgaactacgatgtatatgatcttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatca |
397 |
Q |
| |
|
||||||| ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| ||||| || ||||| |
|
|
| T |
2833307 |
agcaaattacatgaactatgatgtgtatgatcttgaattaacaactgttaaggataacaatgagttgaagagacttttgattgaaacgtcaagtaaatcg |
2833208 |
T |
|
| Q |
398 |
gttatcgttattgaagatattgattgttctctcga |
432 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||| |
|
|
| T |
2833207 |
attatagttatcgaagatattgattgttctctcga |
2833173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 119 - 427
Target Start/End: Original strand, 14577872 - 14578180
Alignment:
| Q |
119 |
caccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttattaaattcaagaaagggaaagagtattatgcta |
218 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| | |||||||||||||||| ||| |||||||| |||| |||||| ||| |||||||| ||||||| |
|
|
| T |
14577872 |
caccctgcaaggttcgaaacacttgctatggatgcaaagaagaaagaagagataatagacgatcttgttaagttcaaggcaggtaaagagtactatgcta |
14577971 |
T |
|
| Q |
219 |
aagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaatttcatgaactacga |
318 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| | ||||| |||||||| || ||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
14577972 |
aagttggaaaggcttggaaacgcggttatttacttttcggtcctccaggaaccggaaaatctaccatgatatcggctattgcaaattttatgaactacga |
14578071 |
T |
|
| Q |
319 |
tgtatatgatcttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatcagttatcgttattgaagatatt |
418 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| |||| || ||||| |||||| |
|
|
| T |
14578072 |
cgtttatgatcttgaattaacaactatcaaggataacaatgagttgaaaagacttttgattgcgacgtcaagcaaatcaattatagtgattgaggatatt |
14578171 |
T |
|
| Q |
419 |
gattgttct |
427 |
Q |
| |
|
||||||||| |
|
|
| T |
14578172 |
gattgttct |
14578180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 158 - 429
Target Start/End: Original strand, 2828815 - 2829086
Alignment:
| Q |
158 |
aagaaagaagagatcataaacgatcttattaaattcaagaaagggaaagagtattatgctaaagttggaaaggcttggaaacggggttatctactctatg |
257 |
Q |
| |
|
||||||||||| || ||||| |||||| |||| ||||| | ||| |||||||| ||| ||||||| || |||||||||||||| ||||||||||| | || |
|
|
| T |
2828815 |
aagaaagaagaaattataaatgatcttgttaagttcaaaacaggtaaagagtactatactaaagtcgggaaggcttggaaacgtggttatctactttttg |
2828914 |
T |
|
| Q |
258 |
gtccaccaggaactgggaaatctaccatgatatctgctattgcaaatttcatgaactacgatgtatatgatcttgaattaacaactgtcaaggataacaa |
357 |
Q |
| |
|
|||| || |||||||| |||||||| |||||||| |||||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||||| ||||||| |
|
|
| T |
2828915 |
gtcctcctggaactggaaaatctacgatgatatcagctattgctaatttcatgaattatgatgtgtatgatcttgagttaacaactatcaagaataacaa |
2829014 |
T |
|
| Q |
358 |
tgagttgaaaacacttttgattgagacgtcgagcaaatcagttatcgttattgaagatattgattgttctct |
429 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
2829015 |
tgagttgaaaagacttttgatcgagacgtcgagtaaatcgattatagttattgaagatattgattgttctct |
2829086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 2828645 - 2828712
Alignment:
| Q |
5 |
caacatgtgttggaccaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaa |
72 |
Q |
| |
|
||||||||||| || |||||||||||||||| ||| ||||||||| || |||||||| |||||||| |
|
|
| T |
2828645 |
caacatgtgttagaacaaggaaaggctattacattgaagaataggaagcttaagctttataccaacaa |
2828712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 1800792 - 1800922
Alignment:
| Q |
209 |
tattatgctaaagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaatttca |
308 |
Q |
| |
|
|||||||| ||| | || |||||||||||||| |||||| |||| |||||||| |||||||| || |||||||| |||||| | ||||| || ||||||| |
|
|
| T |
1800792 |
tattatgcaaaaatcggtaaggcttggaaacgcggttatttactttatggtcctccaggaacaggtaaatctactatgatagccgctatggcgaatttca |
1800891 |
T |
|
| Q |
309 |
tgaactacgatgtatatgatcttgaattaac |
339 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| |
|
|
| T |
1800892 |
tgaactatgatgtttatgatcttgaattaac |
1800922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 222 - 426
Target Start/End: Original strand, 6971135 - 6971339
Alignment:
| Q |
222 |
ttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaatttcatgaactacgatgt |
321 |
Q |
| |
|
|||||| |||||||||| | |||||| |||| |||||||| ||||| ||||| || || || ||||| |||| || |||||||| | ||| ||| | |
|
|
| T |
6971135 |
ttggaagggcttggaaaagaggttatttactttatggtcctccagggactggaaagtcaacaatgattgctgccatggcaaatttgttaggctatgatct |
6971234 |
T |
|
| Q |
322 |
atatgatcttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatcagttatcgttattgaagatattgat |
421 |
Q |
| |
|
|||||||||||||| || |||| |||||||||| |||||||| | |||||||||||||| || || || || | || || ||||||||||||||| |
|
|
| T |
6971235 |
ttatgatcttgaattgactgctgttaaggataacactgagttgaggaagcttttgattgagacatcaagtaagtctataattgtgattgaagatattgat |
6971334 |
T |
|
| Q |
422 |
tgttc |
426 |
Q |
| |
|
||||| |
|
|
| T |
6971335 |
tgttc |
6971339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 230 - 443
Target Start/End: Original strand, 44396056 - 44396269
Alignment:
| Q |
230 |
gcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaatttcatgaactacgatgtatatgatc |
329 |
Q |
| |
|
||||||||| |||||||| |||| | |||||| ||||| ||||| ||||| || ||||| ||||||| || ||||| || || ||||| |||||| |
|
|
| T |
44396056 |
gcttggaaaaggggttatttactttttggtcctccaggtactggtaaatcaacaatgattgctgctatggctaatttgttgggttatgatgtttatgatt |
44396155 |
T |
|
| Q |
330 |
ttgaattaacaactgtcaaggataacaatgagttgaaaacacttttgattgagacgtcgagcaaatcagttatcgttattgaagatattgattgttctct |
429 |
Q |
| |
|
| || |||||| | || |||||||| | |||||||| | |||||||||||||| | || || ||| |||| ||||||||||| ||||||||||| || |
|
|
| T |
44396156 |
tagagttaacagcagtgaaggataatactgagttgaggaagcttttgattgagactacaagtaagtcaattattgttattgaagacattgattgttcact |
44396255 |
T |
|
| Q |
430 |
cgagcttaccggtc |
443 |
Q |
| |
|
|| ||||| |||| |
|
|
| T |
44396256 |
tgatcttacaggtc |
44396269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 53395497 - 53395574
Alignment:
| Q |
229 |
ggcttggaaacggggttatctactctatggtccaccaggaactgggaaatctaccatgatatctgctattgcaaattt |
306 |
Q |
| |
|
|||||||||| | |||||||| || |||||||| ||||||||||| ||||||| |||||| ||||||| || ||||| |
|
|
| T |
53395497 |
ggcttggaaaagaggttatcttctttatggtcctccaggaactggaaaatctagcatgattgctgctatggctaattt |
53395574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 8043817 - 8043880
Alignment:
| Q |
218 |
aaagttggaaaggcttggaaacggggttatctactctatggtccaccaggaactgggaaatcta |
281 |
Q |
| |
|
|||||||| | |||||||||||| |||||| | | |||||||| ||||||||||||||||||| |
|
|
| T |
8043817 |
aaagttggtagggcttggaaacgtggttatttgttgtatggtcctccaggaactgggaaatcta |
8043880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 26210548 - 26210520
Alignment:
| Q |
399 |
ttatcgttattgaagatattgattgttct |
427 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
26210548 |
ttatcgttattgaagatattgattgttct |
26210520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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