View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1168_high_18 (Length: 310)
Name: NF1168_high_18
Description: NF1168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1168_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 26795326 - 26795585
Alignment:
| Q |
1 |
acctgaaatattagacatattaggatgagtatctcttgtacttattatttttccggagggagggaattgtagaaagagaaaaaagactaattttaaaatc |
100 |
Q |
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| T |
26795326 |
acctgaaatattagacatattaggatgagtatctcttgtacttattatttttccggagggagggaa--gtagaaagagaaaaaagactaattttaaaatc |
26795423 |
T |
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| Q |
101 |
agattgaaggtttgagctaaaagatcaaaataggcttaattaatatatctactttttatgatatgttgatatttttcaagacataaattactatataata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26795424 |
agattgaaggtttgagctaaaagatcaaaataggcttaattaatatatctactttttatgatatgttgatatttttcaagacataaattactatataata |
26795523 |
T |
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| Q |
201 |
ataacagaagaaacatattgaggnnnnnnnnnggaactattagctaatttgagttataattact |
264 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26795524 |
ataacagaagaaacatattgagg--aaaaaaaggaactattagctaatttgagttataattact |
26795585 |
T |
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