View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1168_low_21 (Length: 333)

Name: NF1168_low_21
Description: NF1168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1168_low_21
NF1168_low_21
[»] chr1 (22 HSPs)
chr1 (91-212)||(6346625-6346746)
chr1 (259-325)||(16045798-16045864)
chr1 (259-325)||(18404441-18404507)
chr1 (259-325)||(25463675-25463741)
chr1 (264-325)||(3559621-3559682)
chr1 (264-325)||(40214992-40215053)
chr1 (258-325)||(41876442-41876509)
chr1 (264-325)||(6883491-6883552)
chr1 (264-325)||(9910293-9910354)
chr1 (264-325)||(44094702-44094763)
chr1 (259-325)||(19015403-19015469)
chr1 (264-325)||(36966708-36966769)
chr1 (264-325)||(37821834-37821895)
chr1 (264-323)||(32000269-32000328)
chr1 (259-325)||(25973413-25973478)
chr1 (259-325)||(40273701-40273767)
chr1 (284-325)||(27523255-27523296)
chr1 (283-325)||(44690839-44690881)
chr1 (264-325)||(18404654-18404714)
chr1 (264-325)||(19015610-19015670)
chr1 (256-297)||(34519754-34519795)
chr1 (264-325)||(51737711-51737771)
[»] chr2 (21 HSPs)
chr2 (257-325)||(35160754-35160822)
chr2 (264-325)||(10661891-10661952)
chr2 (259-325)||(9293576-9293642)
chr2 (259-325)||(23268062-23268128)
chr2 (264-325)||(21936085-21936146)
chr2 (264-325)||(33380211-33380272)
chr2 (264-325)||(9723409-9723470)
chr2 (259-324)||(13354845-13354910)
chr2 (264-325)||(31174834-31174895)
chr2 (257-325)||(14941366-14941434)
chr2 (258-325)||(7475508-7475575)
chr2 (259-325)||(43330911-43330977)
chr2 (264-325)||(21393688-21393749)
chr2 (288-325)||(3989104-3989141)
chr2 (259-325)||(27847631-27847697)
chr2 (264-325)||(23267861-23267921)
chr2 (272-325)||(9723612-9723665)
chr2 (272-325)||(22591494-22591547)
chr2 (264-325)||(22592918-22592979)
chr2 (264-325)||(33380413-33380473)
chr2 (264-325)||(35160965-35161025)
[»] chr8 (37 HSPs)
chr8 (259-325)||(37986055-37986121)
chr8 (264-325)||(32393862-32393923)
chr8 (259-325)||(1645965-1646031)
chr8 (259-325)||(26042116-26042182)
chr8 (259-325)||(32064744-32064810)
chr8 (264-325)||(14128868-14128929)
chr8 (264-325)||(34665386-34665447)
chr8 (264-325)||(35353045-35353106)
chr8 (259-325)||(17841850-17841916)
chr8 (259-325)||(40780129-40780195)
chr8 (259-325)||(42755042-42755108)
chr8 (259-324)||(15187559-15187624)
chr8 (264-325)||(20091801-20091862)
chr8 (264-325)||(24211553-24211614)
chr8 (268-325)||(38016979-38017036)
chr8 (259-325)||(6108233-6108299)
chr8 (264-325)||(37132658-37132719)
chr8 (257-325)||(41819778-41819846)
chr8 (259-325)||(31347782-31347848)
chr8 (259-325)||(39772801-39772867)
chr8 (264-325)||(8453838-8453899)
chr8 (259-325)||(7017865-7017931)
chr8 (264-325)||(27782117-27782178)
chr8 (265-325)||(25581239-25581299)
chr8 (270-325)||(7021988-7022043)
chr8 (264-325)||(3890413-3890474)
chr8 (264-325)||(30835047-30835107)
chr8 (264-325)||(1503642-1503702)
chr8 (264-325)||(3596840-3596900)
chr8 (288-325)||(3890616-3890653)
chr8 (264-325)||(17841649-17841709)
chr8 (264-325)||(26041912-26041972)
chr8 (264-325)||(27835453-27835514)
chr8 (264-325)||(32064952-32065012)
chr8 (264-325)||(40779928-40779988)
chr8 (264-325)||(42754841-42754901)
chr8 (288-324)||(3597042-3597078)
[»] chr6 (18 HSPs)
chr6 (259-325)||(6127274-6127340)
chr6 (259-325)||(23291084-23291150)
chr6 (259-325)||(33695327-33695393)
chr6 (259-325)||(33696695-33696761)
chr6 (264-325)||(17705465-17705526)
chr6 (259-325)||(18365573-18365639)
chr6 (259-325)||(18370837-18370903)
chr6 (259-325)||(28675147-28675213)
chr6 (264-325)||(6031741-6031802)
chr6 (264-325)||(8515725-8515786)
chr6 (264-325)||(17176021-17176082)
chr6 (259-324)||(18889698-18889762)
chr6 (264-325)||(25986934-25986995)
chr6 (259-325)||(11548588-11548654)
chr6 (264-324)||(29693652-29693712)
chr6 (259-325)||(2309423-2309489)
chr6 (271-325)||(32702216-32702270)
chr6 (264-325)||(33696903-33696963)
[»] chr5 (26 HSPs)
chr5 (259-325)||(2477635-2477701)
chr5 (264-325)||(11361131-11361192)
chr5 (259-325)||(4892201-4892267)
chr5 (264-325)||(37321793-37321855)
chr5 (264-325)||(25398242-25398303)
chr5 (264-325)||(33584329-33584390)
chr5 (257-323)||(3362775-3362841)
chr5 (259-325)||(6043511-6043577)
chr5 (259-325)||(8145374-8145440)
chr5 (257-323)||(38899728-38899794)
chr5 (259-325)||(14138667-14138733)
chr5 (264-325)||(22913054-22913115)
chr5 (264-323)||(12850805-12850864)
chr5 (264-325)||(3522006-3522067)
chr5 (264-325)||(4434007-4434068)
chr5 (263-315)||(27481829-27481881)
chr5 (264-325)||(17545685-17545746)
chr5 (264-325)||(3521806-3521866)
chr5 (264-325)||(6043311-6043371)
chr5 (272-325)||(10458409-10458462)
chr5 (264-325)||(12614733-12614794)
chr5 (258-297)||(13664640-13664679)
chr5 (264-325)||(4892408-4892468)
chr5 (264-325)||(12614536-12614597)
chr5 (264-325)||(14138873-14138933)
chr5 (264-325)||(33584128-33584188)
[»] chr4 (37 HSPs)
chr4 (259-325)||(50156578-50156644)
chr4 (264-325)||(7745112-7745173)
chr4 (258-325)||(31078819-31078886)
chr4 (259-325)||(10442789-10442855)
chr4 (264-325)||(22199265-22199326)
chr4 (264-325)||(49387888-49387949)
chr4 (257-325)||(33530688-33530756)
chr4 (264-323)||(36072951-36073010)
chr4 (259-325)||(21802322-21802388)
chr4 (259-325)||(23964465-23964531)
chr4 (259-325)||(24128238-24128304)
chr4 (259-325)||(36073349-36073415)
chr4 (259-325)||(47290065-47290131)
chr4 (264-325)||(2624841-2624902)
chr4 (259-323)||(4751445-4751509)
chr4 (259-325)||(24392666-24392732)
chr4 (259-325)||(44893425-44893491)
chr4 (257-325)||(44893213-44893282)
chr4 (266-325)||(42671675-42671734)
chr4 (259-325)||(53123029-53123096)
chr4 (264-325)||(46441848-46441909)
chr4 (272-325)||(37219837-37219890)
chr4 (264-324)||(17655637-17655697)
chr4 (259-322)||(37934944-37935007)
chr4 (288-325)||(9088898-9088935)
chr4 (264-325)||(25063373-25063434)
chr4 (264-325)||(44893012-44893072)
chr4 (264-325)||(44893632-44893692)
chr4 (270-325)||(44744445-44744500)
chr4 (264-325)||(9089076-9089136)
chr4 (292-325)||(17655462-17655495)
chr4 (264-325)||(36073555-36073615)
chr4 (264-325)||(46442050-46442110)
chr4 (264-325)||(53123237-53123297)
chr4 (264-324)||(24128446-24128505)
chr4 (264-324)||(36073260-36073320)
chr4 (277-325)||(36073743-36073791)
[»] chr3 (35 HSPs)
chr3 (259-325)||(2754716-2754782)
chr3 (259-325)||(3574527-3574593)
chr3 (259-324)||(11347267-11347332)
chr3 (264-325)||(19650900-19650961)
chr3 (264-325)||(37217053-37217114)
chr3 (258-325)||(22426344-22426411)
chr3 (264-325)||(3456068-3456129)
chr3 (264-325)||(48160909-48160970)
chr3 (259-325)||(36865027-36865093)
chr3 (264-325)||(6041888-6041949)
chr3 (257-314)||(42297350-42297407)
chr3 (259-325)||(3137414-3137480)
chr3 (259-325)||(33113792-33113858)
chr3 (259-325)||(37522052-37522118)
chr3 (264-325)||(8320584-8320645)
chr3 (264-325)||(30385015-30385076)
chr3 (264-325)||(33145717-33145777)
chr3 (259-325)||(33839530-33839596)
chr3 (259-325)||(34482910-34482976)
chr3 (264-325)||(9797029-9797090)
chr3 (266-321)||(41224239-41224294)
chr3 (271-314)||(42921154-42921197)
chr3 (259-325)||(24343546-24343612)
chr3 (264-317)||(42921339-42921392)
chr3 (264-325)||(37522259-37522319)
chr3 (255-323)||(26612780-26612848)
chr3 (272-324)||(47738117-47738169)
chr3 (264-325)||(3137213-3137273)
chr3 (264-325)||(8362045-8362106)
chr3 (264-325)||(34482687-34482747)
chr3 (264-297)||(40327879-40327912)
chr3 (264-325)||(40328037-40328098)
chr3 (288-325)||(41883223-41883260)
chr3 (272-325)||(47738317-47738370)
chr3 (269-325)||(33839741-33839797)
[»] chr7 (22 HSPs)
chr7 (257-325)||(35444555-35444623)
chr7 (258-325)||(15577850-15577917)
chr7 (264-323)||(24394976-24395035)
chr7 (259-325)||(45637711-45637777)
chr7 (264-325)||(3961983-3962044)
chr7 (264-325)||(4974735-4974796)
chr7 (264-325)||(34482839-34482900)
chr7 (264-325)||(42611815-42611876)
chr7 (259-325)||(15329272-15329338)
chr7 (259-325)||(37477080-37477146)
chr7 (264-325)||(25167850-25167911)
chr7 (260-325)||(29737139-29737204)
chr7 (264-325)||(48880927-48880988)
chr7 (264-324)||(36790467-36790527)
chr7 (258-325)||(18036976-18037043)
chr7 (264-325)||(15238386-15238447)
chr7 (264-313)||(20010109-20010158)
chr7 (288-325)||(30848597-30848634)
chr7 (259-325)||(42696082-42696148)
chr7 (264-325)||(25167655-25167715)
chr7 (264-325)||(45637917-45637977)
chr7 (264-325)||(48880726-48880786)
[»] scaffold0204 (2 HSPs)
scaffold0204 (259-325)||(4395-4461)
scaffold0204 (264-325)||(4602-4662)
[»] scaffold0665 (1 HSPs)
scaffold0665 (264-325)||(3072-3133)
[»] scaffold0471 (2 HSPs)
scaffold0471 (259-325)||(12841-12907)
scaffold0471 (264-324)||(13049-13108)
[»] scaffold0096 (1 HSPs)
scaffold0096 (259-325)||(41010-41076)
[»] scaffold0178 (2 HSPs)
scaffold0178 (264-325)||(11625-11686)
scaffold0178 (272-325)||(11827-11879)
[»] scaffold0085 (1 HSPs)
scaffold0085 (264-325)||(47854-47915)
[»] scaffold0228 (5 HSPs)
scaffold0228 (271-325)||(8413-8467)
scaffold0228 (271-325)||(15995-16049)
scaffold0228 (271-325)||(25947-26001)
scaffold0228 (264-325)||(16190-16250)
scaffold0228 (264-325)||(26142-26202)


Alignment Details
Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 6346746 - 6346625
Alignment:
Q  91 agaaactgcggaagagaaatggtacaggctttaagcagttcacaagaaacggcagccaaacggtacgaaatgtttgaatgactgactcaccctaattcta 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6346746 agaaactgcggaagagaaatggtacaggctttaagcagttcacaagaaacggcagccaaacggtacgaaatgtttgaatgactgactcaccctaattcta 6346647  T
Q  191 tcaccttttatattttgtaaat 212  Q
    ||||||||||||||||||||||    
T  6346646 tcaccttttatattttgtaaat 6346625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 16045864 - 16045798
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16045864 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 18404441 - 18404507
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18404441 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 25463675 - 25463741
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25463675 agagcaatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 3559621 - 3559682
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3559621 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 40214992 - 40215053
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40214992 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 41876509 - 41876442
Alignment:
Q  258 tagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| |||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  41876509 tagagcaatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatc 41876442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 6883491 - 6883552
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||    
T  6883491 aatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatc 6883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 9910354 - 9910293
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  9910354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 9910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 44094702 - 44094763
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44094702 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 44094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 19015403 - 19015469
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  19015403 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 19015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 36966769 - 36966708
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  36966769 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 36966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 37821895 - 37821834
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  37821895 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 37821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 32000328 - 32000269
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 323  Q
    |||||||||||| |||||||||||| ||||||||| || |||||||||||| ||||||||    
T  32000328 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 25973413 - 25973478
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||| |||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  25973413 agagcaatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatc 25973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 40273701 - 40273767
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||||| |||| |||||||||||| ||||||||| || |||||||||||| || |||||||    
T  40273701 agagcaatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 27523296 - 27523255
Alignment:
Q  284 attttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  27523296 attttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 325
Target Start/End: Original strand, 44690839 - 44690881
Alignment:
Q  283 gattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||||||  || |||||||||||||||||||||||    
T  44690839 gattttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 18404714 - 18404654
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  18404714 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 18404654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 19015670 - 19015610
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  19015670 aatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 19015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 34519754 - 34519795
Alignment:
Q  256 gatagagtaatgctatatattaagaaagattttatcaagaaa 297  Q
    ||||||| |||||||||||| |||||||||||||| ||||||    
T  34519754 gatagagcaatgctatatatcaagaaagattttattaagaaa 34519795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 51737771 - 51737711
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  51737771 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 51737711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 35160754 - 35160822
Alignment:
Q  257 atagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160754 atagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 10661891 - 10661952
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661891 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 9293642 - 9293576
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  9293642 agagcaatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 23268128 - 23268062
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  23268128 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 23268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 21936085 - 21936146
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  21936085 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 21936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 33380211 - 33380272
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  33380211 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatc 33380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 9723409 - 9723470
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||    
T  9723409 aatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 13354845 - 13354910
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  13354845 agagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 13354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 31174895 - 31174834
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  31174895 aatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatc 31174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 14941434 - 14941366
Alignment:
Q  257 atagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||| |||||||||||| |||||||||||||| ||||||  || |||||||||||||||||||||||    
T  14941434 atagagcaatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 7475575 - 7475508
Alignment:
Q  258 tagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||||  |||||||||    
T  7475575 tagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatc 7475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 43330911 - 43330977
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||| |||| || |||||||||||||||||||||||    
T  43330911 agagcaatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatc 43330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 21393749 - 21393688
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||| ||||| ||||||||| |||||||||||||||| |||||||||    
T  21393749 aatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatc 21393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 3989104 - 3989141
Alignment:
Q  288 tatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatc 3989141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 27847631 - 27847697
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||| ||||| |||||||||||||| ||||||  || |||||||||||| ||||||||||    
T  27847631 agagcaatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 23267861 - 23267921
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  23267861 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 23267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 9723665 - 9723612
Alignment:
Q  272 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||| ||||| |||||||||  ||||||||||||||| ||||||||||    
T  9723665 atatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatc 9723612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  272 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||||| || |||| || |||||||| ||||||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 22592979 - 22592918
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||||||||||  || |||||||||||| || |||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 33380473 - 33380413
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  33380473 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 35161025 - 35160965
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  35161025 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 37986121 - 37986055
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37986121 agagtaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 32393862 - 32393923
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32393862 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 1646031 - 1645965
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1646031 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 26042182 - 26042116
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  26042182 agagcaatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 32064744 - 32064810
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32064744 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 14128868 - 14128929
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14128868 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 34665386 - 34665447
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34665386 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 35353045 - 35353106
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35353045 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 17841916 - 17841850
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  17841916 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 17841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 40780195 - 40780129
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  40780195 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 40780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 42755108 - 42755042
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42755108 agagcaatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 15187559 - 15187624
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  15187559 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 15187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 20091862 - 20091801
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20091862 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 20091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 24211614 - 24211553
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  24211614 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatc 24211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 38016979 - 38017036
Alignment:
Q  268 ctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38016979 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 6108299 - 6108233
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  6108299 agagcaatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 6108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 37132719 - 37132658
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| || ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  37132719 aatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 41819846 - 41819778
Alignment:
Q  257 atagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||| |||| ||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  41819846 atagagcaatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 31347848 - 31347782
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  31347848 agagcaatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatc 31347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 39772867 - 39772801
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  39772867 agagcaatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatc 39772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 8453838 - 8453899
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||||||| || |||||||    
T  8453838 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatc 8453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 7017931 - 7017865
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| | |||||||||| | ||||||| || |||||||||||||||||||||||    
T  7017931 agagcaatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatc 7017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 27782178 - 27782117
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||| ||||||||||||||  || || ||||||||||||||||||||    
T  27782178 aatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 25581299 - 25581239
Alignment:
Q  265 atgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||| ||||||| |||||  |||||||||| ||||||||||||||| |||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatc 25581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 325
Target Start/End: Original strand, 7021988 - 7022043
Alignment:
Q  270 atatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||| |||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatc 7022043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 3890413 - 3890474
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||||||||||  || |||||||| ||||||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 30835107 - 30835047
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||||| ||||||||||||||| | ||||||  |||||||||||||||||||||||    
T  30835107 aatgttatatatcaagaaagattttatcgaaaaaattc-aagaatgacatggcagaataatc 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 1503642 - 1503702
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  1503642 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 3596840 - 3596900
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  3596840 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 3596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 3890653 - 3890616
Alignment:
Q  288 tatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||| || |||||||||||||||||||||||    
T  3890653 tatcaagaaaaattcaagaatgacatggcagaataatc 3890616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 17841649 - 17841709
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  17841649 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 26041912 - 26041972
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  26041912 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 27835514 - 27835453
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| || |||||| |||| ||||||| || ||||||||||||| | |||||||    
T  27835514 aatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatc 27835453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 32065012 - 32064952
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  32065012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatc 32064952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 40779928 - 40779988
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  40779928 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 42754841 - 42754901
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||| | |||||||    
T  42754841 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggtacaataatc 42754901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 3597078 - 3597042
Alignment:
Q  288 tatcaagaaaattttaagaatgacatggcagaataat 324  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  3597078 tatcaagaaagtttcaagaatgacatggcagaataat 3597042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 6127274 - 6127340
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6127274 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 23291150 - 23291084
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23291150 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 33695393 - 33695327
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33695393 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 33696695 - 33696761
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33696695 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 17705526 - 17705465
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17705526 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 18365639 - 18365573
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18365639 agagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 18370903 - 18370837
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18370903 agagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 28675147 - 28675213
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  28675147 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatc 28675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 6031802 - 6031741
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  6031802 aatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 8515786 - 8515725
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  8515786 aatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 17176082 - 17176021
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  17176082 aatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 18889762 - 18889698
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    |||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18889762 agagcaatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataat 18889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 25986934 - 25986995
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  25986934 aatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatc 25986995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 11548654 - 11548588
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||| |||||||||| |||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  11548654 agagtattgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatc 11548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 29693712 - 29693652
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    ||||||| |||| ||||| |||||||||||||||  |||||||||||||||||||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 2309489 - 2309423
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||| ||||||||||||||||| |   ||||||||||| |||||||||||||||    
T  2309489 agagcaatgttatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatc 2309423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 32702216 - 32702270
Alignment:
Q  271 tatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| |||||||||||| ||| |||||||| |||||||| ||||||||||||||    
T  32702216 tatatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatc 32702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 33696963 - 33696903
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  33696963 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 33696903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 2477635 - 2477701
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2477635 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 11361192 - 11361131
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11361192 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 4892201 - 4892267
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4892201 agagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 37321855 - 37321793
Alignment:
Q  264 aatgctatatat-taagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37321855 aatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 25398242 - 25398303
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25398242 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 33584390 - 33584329
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33584390 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 3362775 - 3362841
Alignment:
Q  257 atagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 323  Q
    |||||| |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  3362775 atagagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 3362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 6043577 - 6043511
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  6043577 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatc 6043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 8145374 - 8145440
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8145374 agaggaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 38899794 - 38899728
Alignment:
Q  257 atagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 323  Q
    |||||| |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  38899794 atagagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 38899728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 14138667 - 14138733
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  14138667 agagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatc 14138733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 22913115 - 22913054
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||    
T  22913115 aatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 12850805 - 12850864
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 323  Q
    |||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||    
T  12850805 aatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataa 12850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 3522067 - 3522006
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||    
T  3522067 aatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatc 3522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 4434068 - 4434007
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| | |||||||||| |||||||| ||||||||||||||    
T  4434068 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatc 4434007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 27481829 - 27481881
Alignment:
Q  263 taatgctatatattaagaaagattttatcaagaaaattttaagaatgacatgg 315  Q
    ||||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  27481829 taatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatgg 27481881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 17545746 - 17545685
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||| | ||| ||||||||| || |||||||||||||||||||||||    
T  17545746 aatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 17545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 3521806 - 3521866
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  3521806 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 3521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 6043311 - 6043371
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  6043311 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 6043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 10458409 - 10458462
Alignment:
Q  272 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||| ||||||||||||||| || ||||||||||||||| |||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatc 10458462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 12614794 - 12614733
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||| ||||||||||||||  || |||||||||||| || |||||||    
T  12614794 aatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Original strand, 13664640 - 13664679
Alignment:
Q  258 tagagtaatgctatatattaagaaagattttatcaagaaa 297  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  13664640 tagagcaatgttatatattaagaaagattttatcaagaaa 13664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 4892468 - 4892408
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  4892468 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 12614536 - 12614597
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||| | ||||||||||| |||  |||||||||||||||||| |||||||    
T  12614536 aatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatc 12614597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 14138933 - 14138873
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  14138933 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 14138873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 33584128 - 33584188
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  33584128 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 50156644 - 50156578
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50156644 agagcaatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 50156578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 7745173 - 7745112
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7745173 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 31078886 - 31078819
Alignment:
Q  258 tagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31078886 tagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 10442855 - 10442789
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10442855 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 22199265 - 22199326
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22199265 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 49387949 - 49387888
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49387949 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 33530756 - 33530688
Alignment:
Q  257 atagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||| |||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||    
T  33530756 atagagcaatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 36072951 - 36073010
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 323  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  36072951 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 21802388 - 21802322
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  21802388 agagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 21802322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 23964531 - 23964465
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23964531 agagcaatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 24128238 - 24128304
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  24128238 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 24128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 36073349 - 36073415
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36073349 agaggaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 36073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 47290065 - 47290131
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  47290065 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 47290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 2624841 - 2624902
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2624841 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatc 2624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 4751445 - 4751509
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 323  Q
    |||| |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  4751445 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 4751509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 24392666 - 24392732
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||    
T  24392666 agagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 44893425 - 44893491
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  44893425 agagcaatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatc 44893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 44893282 - 44893213
Alignment:
Q  257 atagagtaatgctatatattaagaaagattttatc-aagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||| ||||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||    
T  44893282 atagagcaatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatc 44893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 42671675 - 42671734
Alignment:
Q  266 tgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||| || |||||||||||||| |||| ||||||||||||||||||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 53123029 - 53123096
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaa-gaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  53123029 agagcaatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatc 53123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 46441848 - 46441909
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| | |||||||||| ||||||||||||||| |||||||    
T  46441848 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatc 46441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 37219890 - 37219837
Alignment:
Q  272 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 17655697 - 17655637
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||| || ||||||    
T  17655697 aatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataat 17655637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 37935007 - 37934944
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaata 322  Q
    |||| |||||||||||| || |||||||||||||| ||||| | ||||||||||||| ||||||    
T  37935007 agagcaatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaata 37934944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 9088898 - 9088935
Alignment:
Q  288 tatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatc 9088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 25063373 - 25063434
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||||||||||  || ||||||||||||| |||||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 44893012 - 44893072
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  44893012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 44893692 - 44893632
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  44893692 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 325
Target Start/End: Original strand, 44744445 - 44744500
Alignment:
Q  270 atatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| ||||||||||||||| ||||||  ||||| |||||||||| |||||||||    
T  44744445 atataataagaaagattttattaagaaatatttaaaaatgacatggtagaataatc 44744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 9089136 - 9089076
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  9089136 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 17655462 - 17655495
Alignment:
Q  292 aagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||| |||||||||||||||||||||||    
T  17655462 aagaaaatttcaagaatgacatggcagaataatc 17655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 36073615 - 36073555
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  36073615 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 46442110 - 46442050
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  46442110 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 53123297 - 53123237
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  53123297 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 24128505 - 24128446
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  24128505 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 24128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 36073260 - 36073320
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    ||||||| ||| ||| || |||||||||||||||  ||||||||||| ||| |||||||||    
T  36073260 aatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataat 36073320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 36073791 - 36073743
Alignment:
Q  277 aagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||||| ||||||  ||||||||||||||| || |||||||    
T  36073791 aagaaagattttatgaagaaagatttaagaatgacatgacaaaataatc 36073743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 2754716 - 2754782
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2754716 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 3574593 - 3574527
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3574593 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 11347267 - 11347332
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11347267 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 19650961 - 19650900
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19650961 aatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 37217114 - 37217053
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37217114 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 22426411 - 22426344
Alignment:
Q  258 tagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22426411 tagagcaatgttatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatc 22426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 3456068 - 3456129
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3456068 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 48160909 - 48160970
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48160909 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 36865093 - 36865027
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  36865093 agagcaatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatc 36865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 6041888 - 6041949
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  6041888 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 314
Target Start/End: Original strand, 42297350 - 42297407
Alignment:
Q  257 atagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatg 314  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42297350 atagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatg 42297407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 3137480 - 3137414
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  3137480 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatc 3137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 33113792 - 33113858
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  33113792 agagcaatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatc 33113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 37522052 - 37522118
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||| |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  37522052 agagcaatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 8320645 - 8320584
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  8320645 aatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatc 8320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 30385015 - 30385076
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  30385015 aatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatc 30385076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 33145717 - 33145777
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||    
T  33145717 aatgctatatatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatc 33145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 33839530 - 33839596
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||    
T  33839530 agagcaatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 34482976 - 34482910
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||| |||| |||||||||    
T  34482976 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatc 34482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 9797090 - 9797029
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||    
T  9797090 aatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 41224239 - 41224294
Alignment:
Q  266 tgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaat 321  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||||| |||||    
T  41224239 tgctatatattaagaaagattttctcaagaaaaattcaagaatgacatggtagaat 41224294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 42921154 - 42921197
Alignment:
Q  271 tatattaagaaagattttatcaagaaaattttaagaatgacatg 314  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatgacatg 42921197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 24343546 - 24343612
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||||||||||||||||||||||||||||||||| || || | | | ||||||||||||||    
T  24343546 agagcaatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatc 24343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 42921392 - 42921339
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggca 317  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||||||    
T  42921392 aatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggca 42921339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 37522319 - 37522259
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  37522319 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatc 37522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 26612780 - 26612848
Alignment:
Q  255 tgatagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 323  Q
    |||||||| |||  ||||||| || ||||||||||| || |||| || |||||||||||||||||||||    
T  26612780 tgatagagcaatattatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataa 26612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  272 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    |||| |||||||||||||||||||||  || |||||||| |||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 3137213 - 3137273
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  3137213 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 8362106 - 8362045
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||| |   | ||||||||| || |||||||||||||||||||||||    
T  8362106 aatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatc 8362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 34482687 - 34482747
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  34482687 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 40327879 - 40327912
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaa 297  Q
    |||||||||||| |||||||||||||||||||||    
T  40327879 aatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 40328098 - 40328037
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||||||||||  || |||||||||||| || |||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 41883260 - 41883223
Alignment:
Q  288 tatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||| || |||||||||||||||||||||||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatc 41883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 47738370 - 47738317
Alignment:
Q  272 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||| |||||||||||||||  || ||||||||||||||| |||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 33839797 - 33839741
Alignment:
Q  269 tatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| ||||| |||||||||||||||  || |||||||||||| || |||||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 35444555 - 35444623
Alignment:
Q  257 atagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  35444555 atagagcaatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 35444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 15577917 - 15577850
Alignment:
Q  258 tagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15577917 tagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 24394976 - 24395035
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 323  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24394976 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 45637711 - 45637777
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45637711 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 3961983 - 3962044
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3961983 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 4974796 - 4974735
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4974796 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 34482839 - 34482900
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34482839 aatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 42611815 - 42611876
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42611815 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 15329272 - 15329338
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  15329272 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 37477146 - 37477080
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  37477146 agagcaatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 25167911 - 25167850
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  25167911 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 25167850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 260 - 325
Target Start/End: Original strand, 29737139 - 29737204
Alignment:
Q  260 gagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||||||    
T  29737139 gagtaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatc 29737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 48880988 - 48880927
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  48880988 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 36790527 - 36790467
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  36790527 aatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 325
Target Start/End: Original strand, 18036976 - 18037043
Alignment:
Q  258 tagagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| |||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  18036976 tagagcaatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 15238386 - 15238447
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| |||||| | ||| ||||||||| || |||||||||||||||||||||||    
T  15238386 aatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 15238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 20010158 - 20010109
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacat 313  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  20010158 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacat 20010109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 30848597 - 30848634
Alignment:
Q  288 tatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatc 30848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 42696082 - 42696148
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||| ||||||| |||||||||||||| || ||  ||||||||||||||| |||||||||||    
T  42696082 agagcaatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatc 42696148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 25167655 - 25167715
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  25167655 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 25167715  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 45637977 - 45637917
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  45637977 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 45637917  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 48880726 - 48880786
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  48880726 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 48880786  T

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Target: scaffold0204 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 4395 - 4461
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4395 agagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

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Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 4662 - 4602
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  4662 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 4602  T

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Target: scaffold0665 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 3072 - 3133
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3072 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

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Target: scaffold0471 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 12841 - 12907
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  12841 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 12907  T

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Target: scaffold0471; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 13108 - 13049
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 324  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  13108 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 13049  T

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Target: scaffold0096 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 41010 - 41076
Alignment:
Q  259 agagtaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  41010 agagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 41076  T

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Target: scaffold0178 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 11625 - 11686
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  11625 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 11879 - 11827
Alignment:
Q  272 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  11879 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 11827  T

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Target: scaffold0085 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 47854 - 47915
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47854 aatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

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Target: scaffold0228 (Bit Score: 47; Significance: 8e-18; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 8413 - 8467
Alignment:
Q  271 tatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 15995 - 16049
Alignment:
Q  271 tatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 25947 - 26001
Alignment:
Q  271 tatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 16250 - 16190
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  16250 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 26202 - 26142
Alignment:
Q  264 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 325  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  26202 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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