View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1168_low_29 (Length: 262)
Name: NF1168_low_29
Description: NF1168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1168_low_29 |
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Alignment Details
Target: chr6 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 40 - 216
Target Start/End: Complemental strand, 6715004 - 6714828
Alignment:
| Q |
40 |
atcactaacaccttcctcaccaaagaaaagtatagacaccaatcccaatctatcacatttccatcatggtcaatatttaggtaggaaattaaatttagtc |
139 |
Q |
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| T |
6715004 |
atcactaacaccttcctcagcaaagaaaagtatagacaccaatcccaatctatcacatttccatcatggtcaatatttaggtaggaaattaaatttagta |
6714905 |
T |
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| Q |
140 |
tatgtcttctctcattttaattattgtatatatgacaaactaacatgtaccgtatgtgtatcatagaaaactttgca |
216 |
Q |
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| T |
6714904 |
tatgtcttctctcattttaattattgtatatatgacaaactaacatgctccgtatgtgtatcatagaaaactttgca |
6714828 |
T |
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