View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1168_low_7 (Length: 564)

Name: NF1168_low_7
Description: NF1168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1168_low_7
NF1168_low_7
[»] chr7 (99 HSPs)
chr7 (160-535)||(23704664-23705040)
chr7 (227-535)||(20458760-20459066)
chr7 (227-535)||(20419605-20419913)
chr7 (227-469)||(38879793-38880035)
chr7 (227-535)||(12006609-12006916)
chr7 (227-535)||(41600027-41600334)
chr7 (227-535)||(23383569-23383876)
chr7 (227-535)||(48672348-48672655)
chr7 (230-451)||(44816907-44817128)
chr7 (227-535)||(20963564-20963869)
chr7 (9-161)||(2596963-2597115)
chr7 (227-470)||(10409440-10409683)
chr7 (227-535)||(28218248-28218539)
chr7 (227-467)||(31851308-31851548)
chr7 (227-386)||(24194941-24195105)
chr7 (231-470)||(1250279-1250518)
chr7 (227-354)||(25772432-25772559)
chr7 (227-465)||(7658040-7658276)
chr7 (241-403)||(33162668-33162830)
chr7 (227-354)||(48648330-48648457)
chr7 (313-535)||(6465857-6466077)
chr7 (351-470)||(25772525-25772643)
chr7 (17-160)||(26820255-26820398)
chr7 (363-470)||(48648434-48648541)
chr7 (227-296)||(16995268-16995337)
chr7 (421-535)||(28218180-28218294)
chr7 (421-535)||(20419538-20419651)
chr7 (158-272)||(28218427-28218545)
chr7 (227-301)||(1250441-1250515)
chr7 (227-269)||(31851506-31851548)
chr7 (227-301)||(38879959-38880033)
chr7 (227-272)||(12006804-12006849)
chr7 (227-272)||(23383764-23383809)
chr7 (421-535)||(23704924-23705036)
chr7 (227-272)||(41600222-41600267)
chr7 (162-272)||(23704662-23704775)
chr7 (412-534)||(7657972-7658095)
chr7 (227-272)||(20419800-20419845)
chr7 (227-272)||(20458955-20459000)
chr7 (227-272)||(25772595-25772640)
chr7 (421-535)||(44816833-44816950)
chr7 (227-272)||(48672543-48672588)
chr7 (423-535)||(16995202-16995312)
chr7 (161-213)||(28218177-28218229)
chr7 (482-535)||(10409695-10409749)
chr7 (421-535)||(12006543-12006655)
chr7 (162-212)||(38879723-38879773)
chr7 (421-535)||(48672279-48672394)
chr7 (160-213)||(12006539-12006592)
chr7 (160-213)||(12006867-12006920)
chr7 (160-213)||(20458690-20458743)
chr7 (160-213)||(20963820-20963873)
chr7 (421-470)||(38879790-38879839)
chr7 (421-470)||(48648327-48648376)
chr7 (160-213)||(48672606-48672659)
chr7 (229-269)||(7658236-7658276)
chr7 (236-272)||(20419696-20419732)
chr7 (421-469)||(20458758-20458806)
chr7 (236-272)||(20963655-20963691)
chr7 (314-354)||(24195056-24195096)
chr7 (314-354)||(28218257-28218297)
chr7 (161-213)||(33162863-33162915)
chr7 (161-213)||(41600285-41600337)
chr7 (314-354)||(44816913-44816953)
chr7 (162-213)||(20419536-20419587)
chr7 (314-349)||(20458774-20458809)
chr7 (227-270)||(20963760-20963803)
chr7 (162-213)||(23383499-23383550)
chr7 (162-213)||(38880048-38880099)
chr7 (229-272)||(44817099-44817142)
chr7 (227-301)||(6465923-6465997)
chr7 (482-535)||(7658287-7658341)
chr7 (162-212)||(16995200-16995250)
chr7 (227-272)||(24194932-24194978)
chr7 (412-470)||(24195050-24195108)
chr7 (497-535)||(24195210-24195248)
chr7 (497-535)||(38879725-38879763)
chr7 (486-535)||(41599960-41600010)
chr7 (161-210)||(8994201-8994250)
chr7 (227-272)||(10409443-10409488)
chr7 (421-470)||(20963561-20963610)
chr7 (421-470)||(23383566-23383615)
chr7 (498-535)||(25772366-25772403)
chr7 (160-213)||(25772658-25772711)
chr7 (487-535)||(38880048-38880097)
chr7 (160-213)||(48672275-48672328)
chr7 (185-213)||(1250533-1250561)
chr7 (314-354)||(12006618-12006658)
chr7 (314-354)||(16995277-16995317)
chr7 (160-208)||(20459022-20459070)
chr7 (314-354)||(20963573-20963613)
chr7 (236-272)||(23704843-23704879)
chr7 (314-354)||(23704921-23704961)
chr7 (162-202)||(24195210-24195250)
chr7 (161-201)||(25772363-25772403)
chr7 (314-354)||(25772441-25772481)
chr7 (314-354)||(38879802-38879842)
chr7 (421-469)||(41600025-41600073)
chr7 (418-458)||(48648417-48648457)
[»] chr3 (112 HSPs)
chr3 (227-535)||(21632903-21633205)
chr3 (227-535)||(19112834-19113141)
chr3 (161-535)||(9266974-9267350)
chr3 (160-535)||(16721993-16722371)
chr3 (227-535)||(20853765-20854071)
chr3 (231-535)||(45969917-45970220)
chr3 (227-535)||(30500110-30500416)
chr3 (227-535)||(14262105-14262412)
chr3 (227-535)||(49986529-49986836)
chr3 (227-535)||(14171655-14171962)
chr3 (227-470)||(45003562-45003805)
chr3 (227-535)||(5800607-5800914)
chr3 (227-467)||(15328529-15328769)
chr3 (227-470)||(14161937-14162180)
chr3 (160-452)||(35995676-35995972)
chr3 (227-535)||(52552761-52553064)
chr3 (227-535)||(43572391-43572700)
chr3 (227-535)||(33372408-33372713)
chr3 (227-469)||(17465436-17465678)
chr3 (227-469)||(38283617-38283859)
chr3 (227-449)||(4204777-4204999)
chr3 (227-467)||(47575342-47575581)
chr3 (325-535)||(11003734-11003943)
chr3 (370-470)||(17649222-17649322)
chr3 (161-301)||(30500276-30500419)
chr3 (155-272)||(43572382-43572503)
chr3 (227-301)||(14161940-14162014)
chr3 (227-301)||(52552923-52552997)
chr3 (421-535)||(9266977-9267090)
chr3 (422-535)||(19112766-19112879)
chr3 (227-303)||(45058724-45058800)
chr3 (161-301)||(14262271-14262415)
chr3 (227-301)||(5800674-5800748)
chr3 (161-272)||(16721990-16722105)
chr3 (161-301)||(35995913-35996054)
chr3 (227-272)||(20853960-20854005)
chr3 (422-535)||(16722255-16722367)
chr3 (421-535)||(35995680-35995793)
chr3 (9-64)||(54505233-54505288)
chr3 (227-301)||(38283619-38283693)
chr3 (422-532)||(14162135-14162243)
chr3 (160-213)||(14171913-14171966)
chr3 (421-470)||(21633159-21633208)
chr3 (227-272)||(33372475-33372520)
chr3 (227-272)||(45003565-45003610)
chr3 (422-532)||(5800869-5800977)
chr3 (426-535)||(45970183-45970292)
chr3 (227-270)||(11003801-11003844)
chr3 (227-270)||(14171852-14171895)
chr3 (422-469)||(14262103-14262150)
chr3 (482-532)||(27946114-27946165)
chr3 (162-212)||(14161871-14161921)
chr3 (227-301)||(15328529-15328603)
chr3 (482-535)||(19720335-19720389)
chr3 (482-535)||(27946187-27946241)
chr3 (422-532)||(30500048-30500155)
chr3 (227-269)||(45969984-45970026)
chr3 (160-214)||(49986525-49986579)
chr3 (227-269)||(49986597-49986639)
chr3 (163-213)||(52553015-52553065)
chr3 (421-470)||(4204774-4204823)
chr3 (313-354)||(4204786-4204827)
chr3 (227-272)||(9267239-9267284)
chr3 (160-213)||(19112762-19112815)
chr3 (227-272)||(19113029-19113074)
chr3 (421-535)||(20853697-20853811)
chr3 (227-272)||(35740884-35740929)
chr3 (313-354)||(43572650-43572691)
chr3 (318-354)||(14162135-14162171)
chr3 (422-470)||(15328724-15328772)
chr3 (228-272)||(21632966-21633010)
chr3 (314-354)||(21633156-21633196)
chr3 (161-213)||(27946192-27946244)
chr3 (314-354)||(35995756-35995796)
chr3 (232-272)||(35995838-35995878)
chr3 (421-469)||(43572654-43572702)
chr3 (422-470)||(45058755-45058803)
chr3 (161-213)||(45969914-45969966)
chr3 (422-470)||(52552758-52552806)
chr3 (162-213)||(19720333-19720384)
chr3 (227-258)||(19720402-19720433)
chr3 (423-470)||(33372669-33372716)
chr3 (320-354)||(11003810-11003844)
chr3 (227-269)||(17649277-17649319)
chr3 (482-535)||(35995997-35996051)
chr3 (227-301)||(47575507-47575581)
chr3 (482-535)||(49986850-49986904)
chr3 (231-272)||(1068913-1068954)
chr3 (160-213)||(9267301-9267354)
chr3 (239-272)||(17465528-17465561)
chr3 (161-210)||(17465697-17465746)
chr3 (498-535)||(17465706-17465743)
chr3 (160-213)||(21633223-21633276)
chr3 (317-354)||(32998397-32998434)
chr3 (227-272)||(32998398-32998443)
chr3 (184-213)||(35741911-35741940)
chr3 (227-272)||(36990924-36990969)
chr3 (227-272)||(37016364-37016409)
chr3 (314-351)||(49986788-49986825)
chr3 (159-212)||(49986856-49986909)
chr3 (318-354)||(5800869-5800905)
chr3 (314-354)||(9267053-9267093)
chr3 (153-213)||(14162197-14162257)
chr3 (318-354)||(14262114-14262150)
chr3 (236-272)||(16722173-16722209)
chr3 (161-201)||(20853694-20853734)
chr3 (161-201)||(21632900-21632940)
chr3 (232-272)||(38283728-38283768)
chr3 (160-212)||(45003823-45003875)
chr3 (161-213)||(45970243-45970295)
chr3 (232-272)||(47575432-47575472)
chr3 (236-272)||(49986710-49986746)
[»] chr8 (73 HSPs)
chr8 (227-535)||(10108372-10108679)
chr8 (227-469)||(26136752-26136994)
chr8 (227-535)||(14820297-14820603)
chr8 (154-470)||(17622882-17623199)
chr8 (227-467)||(14767576-14767816)
chr8 (227-535)||(21148006-21148312)
chr8 (227-535)||(5554871-5555178)
chr8 (227-467)||(22494454-22494693)
chr8 (231-535)||(7689526-7689828)
chr8 (161-467)||(21147935-21148245)
chr8 (227-535)||(30789576-30789883)
chr8 (227-467)||(42605822-42606062)
chr8 (231-470)||(2583386-2583625)
chr8 (162-444)||(43851665-43851950)
chr8 (227-451)||(42113053-42113277)
chr8 (227-395)||(26532852-26533020)
chr8 (252-470)||(43481408-43481626)
chr8 (161-301)||(10108369-10108513)
chr8 (162-301)||(14820295-14820437)
chr8 (421-535)||(43851667-43851779)
chr8 (229-301)||(5554940-5555012)
chr8 (227-296)||(10171383-10171452)
chr8 (422-532)||(21147941-21148051)
chr8 (227-272)||(42605822-42605867)
chr8 (161-213)||(26136684-26136736)
chr8 (366-469)||(21144713-21144816)
chr8 (227-270)||(30789773-30789816)
chr8 (227-301)||(17623122-17623196)
chr8 (227-301)||(21148171-21148245)
chr8 (239-380)||(22848399-22848540)
chr8 (160-213)||(5554867-5554920)
chr8 (422-532)||(10108634-10108743)
chr8 (422-532)||(14820558-14820667)
chr8 (161-272)||(42113248-42113360)
chr8 (161-213)||(43481642-43481694)
chr8 (412-535)||(10171397-10171519)
chr8 (162-213)||(18044154-18044205)
chr8 (227-270)||(22494454-22494497)
chr8 (227-301)||(2583389-2583463)
chr8 (422-529)||(5555133-5555239)
chr8 (227-301)||(14767742-14767816)
chr8 (482-535)||(17622892-17622946)
chr8 (486-535)||(18044153-18044203)
chr8 (227-301)||(21144740-21144814)
chr8 (421-467)||(26136948-26136994)
chr8 (424-470)||(42606019-42606065)
chr8 (421-535)||(7689786-7689899)
chr8 (160-213)||(10171470-10171523)
chr8 (161-213)||(7689850-7689902)
chr8 (422-470)||(14767573-14767621)
chr8 (161-213)||(21148263-21148315)
chr8 (314-354)||(26136945-26136985)
chr8 (313-349)||(30789590-30789626)
chr8 (233-272)||(7689598-7689637)
chr8 (231-269)||(43481581-43481619)
chr8 (160-201)||(7689522-7689563)
chr8 (313-354)||(21144764-21144805)
chr8 (421-470)||(22494647-22494696)
chr8 (227-272)||(28977688-28977733)
chr8 (227-264)||(38726756-38726793)
chr8 (314-354)||(7689783-7689823)
chr8 (236-272)||(10108552-10108588)
chr8 (161-213)||(10108697-10108749)
chr8 (161-213)||(14820621-14820673)
chr8 (236-272)||(17623047-17623083)
chr8 (318-354)||(21148015-21148051)
chr8 (314-354)||(22494644-22494684)
chr8 (161-213)||(26137011-26137063)
chr8 (161-213)||(30789834-30789886)
chr8 (185-213)||(40487741-40487769)
chr8 (482-529)||(42112993-42113041)
chr8 (314-354)||(43851742-43851782)
chr8 (236-272)||(43851824-43851860)
[»] scaffold0361 (7 HSPs)
scaffold0361 (227-535)||(4564-4872)
scaffold0361 (421-535)||(4826-4938)
scaffold0361 (314-354)||(4823-4863)
scaffold0361 (160-210)||(4892-4942)
scaffold0361 (231-272)||(4636-4677)
scaffold0361 (161-213)||(4561-4613)
scaffold0361 (236-272)||(4745-4781)
[»] chr4 (101 HSPs)
chr4 (227-535)||(9516679-9516986)
chr4 (227-536)||(9618981-9619288)
chr4 (227-534)||(38574037-38574343)
chr4 (228-535)||(46046494-46046799)
chr4 (227-535)||(31090130-31090437)
chr4 (227-535)||(37012776-37013082)
chr4 (227-470)||(34064051-34064294)
chr4 (228-470)||(7819080-7819322)
chr4 (160-534)||(9396702-9397078)
chr4 (227-529)||(15640724-15641024)
chr4 (227-470)||(31944016-31944259)
chr4 (233-534)||(3018014-3018315)
chr4 (227-470)||(18713026-18713269)
chr4 (227-470)||(48579935-48580178)
chr4 (230-452)||(4355965-4356187)
chr4 (229-450)||(18667375-18667596)
chr4 (227-466)||(3273692-3273929)
chr4 (227-470)||(13132010-13132253)
chr4 (227-386)||(48259901-48260060)
chr4 (162-354)||(26252418-26252615)
chr4 (351-467)||(26252337-26252453)
chr4 (231-341)||(35376322-35376433)
chr4 (351-535)||(35376165-35376344)
chr4 (368-467)||(41947066-41947165)
chr4 (227-301)||(3018081-3018155)
chr4 (227-272)||(38574232-38574277)
chr4 (228-272)||(3273692-3273736)
chr4 (227-301)||(4355950-4356024)
chr4 (227-269)||(31944019-31944061)
chr4 (227-301)||(34064217-34064291)
chr4 (227-269)||(37012974-37013016)
chr4 (227-272)||(9619049-9619094)
chr4 (227-272)||(13132205-13132250)
chr4 (227-272)||(15640784-15640829)
chr4 (227-272)||(26252337-26252382)
chr4 (227-272)||(48580130-48580175)
chr4 (227-286)||(12904815-12904874)
chr4 (227-301)||(9396768-9396842)
chr4 (227-301)||(18713029-18713103)
chr4 (482-535)||(31218303-31218357)
chr4 (227-273)||(41947119-41947165)
chr4 (227-268)||(7819083-7819124)
chr4 (227-272)||(9516874-9516919)
chr4 (227-272)||(31090325-31090370)
chr4 (160-213)||(31218308-31218361)
chr4 (421-535)||(34063984-34064097)
chr4 (421-535)||(38573971-38574083)
chr4 (227-272)||(46046688-46046733)
chr4 (422-470)||(37012773-37012821)
chr4 (427-535)||(9396968-9397074)
chr4 (482-535)||(9619301-9619355)
chr4 (421-535)||(9516612-9516725)
chr4 (161-210)||(18667620-18667669)
chr4 (421-470)||(31090127-31090176)
chr4 (483-535)||(41946967-41947020)
chr4 (165-213)||(3018014-3018062)
chr4 (314-354)||(9516688-9516728)
chr4 (161-201)||(12904923-12904963)
chr4 (422-470)||(18713224-18713272)
chr4 (160-212)||(31943948-31943999)
chr4 (227-295)||(35376231-35376299)
chr4 (161-213)||(41946964-41947016)
chr4 (237-272)||(9396882-9396917)
chr4 (314-349)||(34064065-34064100)
chr4 (154-213)||(46046422-46046481)
chr4 (163-213)||(9516611-9516661)
chr4 (482-535)||(31944272-31944326)
chr4 (163-213)||(34063983-34064033)
chr4 (486-535)||(41947180-41947230)
chr4 (482-535)||(48259825-48259879)
chr4 (160-213)||(3273619-3273672)
chr4 (421-535)||(3273883-3273994)
chr4 (421-466)||(7819277-7819322)
chr4 (482-534)||(13131943-13131996)
chr4 (313-354)||(15640974-15641015)
chr4 (421-470)||(15640978-15641027)
chr4 (317-354)||(26252346-26252383)
chr4 (421-470)||(35376391-35376440)
chr4 (317-354)||(36888943-36888980)
chr4 (227-272)||(36888944-36888989)
chr4 (317-354)||(43312287-43312324)
chr4 (161-210)||(48259822-48259871)
chr4 (313-349)||(3273879-3273915)
chr4 (236-272)||(7819196-7819232)
chr4 (314-354)||(7819274-7819314)
chr4 (236-272)||(9516770-9516806)
chr4 (314-354)||(9619239-9619279)
chr4 (161-213)||(9619306-9619358)
chr4 (314-354)||(12904824-12904864)
chr4 (313-349)||(13132024-13132060)
chr4 (227-271)||(31083362-31083406)
chr4 (314-354)||(31090139-31090179)
chr4 (161-213)||(31944277-31944329)
chr4 (314-354)||(35376388-35376428)
chr4 (173-213)||(35376454-35376494)
chr4 (318-354)||(37012785-37012821)
chr4 (161-213)||(37013033-37013085)
chr4 (314-354)||(38574046-38574086)
chr4 (240-272)||(38574128-38574160)
chr4 (161-213)||(46046751-46046802)
chr4 (422-470)||(48579932-48579980)
[»] chr6 (59 HSPs)
chr6 (227-535)||(24731937-24732247)
chr6 (227-534)||(26385347-26385649)
chr6 (227-535)||(9481184-9481491)
chr6 (236-466)||(2299389-2299617)
chr6 (227-469)||(30618029-30618270)
chr6 (227-403)||(33714556-33714732)
chr6 (166-459)||(10321737-10322032)
chr6 (227-386)||(18500383-18500543)
chr6 (227-452)||(30458970-30459195)
chr6 (227-403)||(14680951-14681127)
chr6 (287-470)||(3229992-3230174)
chr6 (233-354)||(33637709-33637831)
chr6 (241-349)||(32017619-32017727)
chr6 (318-452)||(18500506-18500641)
chr6 (351-535)||(32017698-32017879)
chr6 (318-400)||(17142798-17142880)
chr6 (351-470)||(33637625-33637744)
chr6 (227-307)||(9854116-9854196)
chr6 (227-272)||(32017768-32017813)
chr6 (163-272)||(19284130-19284243)
chr6 (227-301)||(9481251-9481325)
chr6 (412-470)||(19284195-19284253)
chr6 (227-301)||(30618031-30618105)
chr6 (421-535)||(18500317-18500429)
chr6 (158-213)||(24731931-24731986)
chr6 (227-272)||(24732007-24732052)
chr6 (160-212)||(2299641-2299693)
chr6 (421-535)||(24732201-24732313)
chr6 (162-213)||(9481182-9481233)
chr6 (227-269)||(17142746-17142788)
chr6 (486-535)||(18500655-18500705)
chr6 (228-265)||(2299580-2299617)
chr6 (227-268)||(9154949-9154990)
chr6 (313-354)||(9854146-9854187)
chr6 (160-213)||(18500656-18500709)
chr6 (421-535)||(26385280-26385393)
chr6 (426-470)||(9154946-9154990)
chr6 (422-470)||(9481446-9481494)
chr6 (318-354)||(9481446-9481482)
chr6 (161-213)||(32017830-32017882)
chr6 (314-354)||(33714565-33714605)
chr6 (483-533)||(10321737-10321788)
chr6 (161-204)||(24732273-24732316)
chr6 (162-213)||(26385278-26385329)
chr6 (227-269)||(3230129-3230171)
chr6 (235-301)||(10321966-10322032)
chr6 (236-274)||(17142796-17142834)
chr6 (486-535)||(19284131-19284181)
chr6 (227-269)||(26385541-26385583)
chr6 (227-301)||(33637628-33637702)
chr6 (313-354)||(14681141-14681182)
chr6 (317-354)||(19284207-19284244)
chr6 (421-470)||(33714553-33714602)
chr6 (236-272)||(3230023-3230059)
chr6 (421-469)||(9854150-9854198)
chr6 (314-354)||(18500392-18500432)
chr6 (314-354)||(24732198-24732238)
chr6 (236-272)||(26385438-26385474)
chr6 (165-213)||(26385601-26385649)
[»] chr2 (80 HSPs)
chr2 (227-535)||(22263260-22263569)
chr2 (227-466)||(23806022-23806261)
chr2 (227-467)||(17463160-17463400)
chr2 (227-470)||(26135883-26136126)
chr2 (227-470)||(15106133-15106376)
chr2 (227-535)||(26560623-26560931)
chr2 (227-535)||(17850655-17850962)
chr2 (227-470)||(42670788-42671031)
chr2 (227-532)||(19251476-19251779)
chr2 (227-535)||(20498749-20499054)
chr2 (236-452)||(39878186-39878402)
chr2 (234-466)||(13284484-13284716)
chr2 (290-469)||(23854798-23854977)
chr2 (227-403)||(33290182-33290358)
chr2 (227-354)||(26236277-26236404)
chr2 (227-354)||(30390528-30390655)
chr2 (351-535)||(26236129-26236311)
chr2 (239-334)||(13254638-13254733)
chr2 (227-301)||(19251539-19251613)
chr2 (421-535)||(26236358-26236470)
chr2 (229-301)||(22263426-22263498)
chr2 (161-272)||(17850850-17850965)
chr2 (227-301)||(23854901-23854975)
chr2 (227-301)||(42670954-42671028)
chr2 (228-301)||(13284643-13284716)
chr2 (421-535)||(23806215-23806328)
chr2 (161-213)||(22263520-22263572)
chr2 (227-267)||(23854757-23854797)
chr2 (227-301)||(26560789-26560863)
chr2 (227-301)||(33290118-33290192)
chr2 (227-272)||(26135886-26135931)
chr2 (427-532)||(23854693-23854797)
chr2 (228-295)||(23806022-23806089)
chr2 (231-294)||(26236200-26236263)
chr2 (421-535)||(15106330-15106441)
chr2 (227-301)||(17463160-17463234)
chr2 (482-535)||(17463413-17463467)
chr2 (482-535)||(19251791-19251845)
chr2 (155-209)||(23855025-23855079)
chr2 (227-272)||(15106136-15106181)
chr2 (365-402)||(30390634-30390671)
chr2 (313-349)||(13254695-13254731)
chr2 (161-213)||(17463418-17463470)
chr2 (484-535)||(17850589-17850641)
chr2 (422-470)||(22263257-22263305)
chr2 (236-272)||(26236277-26236313)
chr2 (161-213)||(26236421-26236473)
chr2 (422-470)||(26560620-26560668)
chr2 (162-213)||(17850587-17850638)
chr2 (482-532)||(42670722-42670773)
chr2 (412-470)||(13254563-13254621)
chr2 (424-470)||(20499011-20499057)
chr2 (497-535)||(23855032-23855070)
chr2 (486-535)||(26136143-26136193)
chr2 (421-467)||(30390528-30390574)
chr2 (227-265)||(30959943-30959981)
chr2 (227-269)||(34548642-34548684)
chr2 (160-201)||(13254495-13254536)
chr2 (227-268)||(13254566-13254607)
chr2 (482-534)||(13254758-13254811)
chr2 (237-270)||(19251653-19251686)
chr2 (313-354)||(19251729-19251770)
chr2 (160-213)||(19251796-19251849)
chr2 (160-213)||(20498745-20498798)
chr2 (227-272)||(20498815-20498859)
chr2 (227-272)||(21482144-21482189)
chr2 (184-213)||(21482206-21482235)
chr2 (227-264)||(23046776-23046813)
chr2 (184-213)||(33290071-33290100)
chr2 (313-354)||(33290127-33290168)
chr2 (227-264)||(44098894-44098931)
chr2 (173-213)||(13254763-13254803)
chr2 (314-354)||(15106327-15106367)
chr2 (236-272)||(22263351-22263387)
chr2 (314-354)||(23806212-23806252)
chr2 (314-354)||(26236355-26236395)
chr2 (318-354)||(26560632-26560668)
chr2 (497-533)||(30390463-30390499)
chr2 (314-354)||(30390537-30390577)
chr2 (318-354)||(42670797-42670833)
[»] chr5 (94 HSPs)
chr5 (227-535)||(24837238-24837545)
chr5 (163-470)||(993751-994058)
chr5 (227-535)||(7125986-7126293)
chr5 (227-535)||(14143904-14144210)
chr5 (167-470)||(7125923-7126229)
chr5 (227-467)||(4919059-4919299)
chr5 (227-535)||(41001422-41001728)
chr5 (227-535)||(24074305-24074611)
chr5 (227-535)||(17762285-17762591)
chr5 (227-470)||(31799709-31799952)
chr5 (227-532)||(20709281-20709584)
chr5 (227-469)||(6817191-6817432)
chr5 (227-535)||(24650769-24651075)
chr5 (173-470)||(29444872-29445172)
chr5 (227-470)||(18336534-18336765)
chr5 (162-396)||(23979042-23979279)
chr5 (227-354)||(14411847-14411975)
chr5 (231-354)||(27159063-27159185)
chr5 (351-535)||(14411699-14411882)
chr5 (227-402)||(22571146-22571321)
chr5 (355-532)||(27159154-27159327)
chr5 (227-329)||(30512356-30512459)
chr5 (227-329)||(30552696-30552799)
chr5 (227-301)||(7126152-7126226)
chr5 (161-301)||(14143901-14144044)
chr5 (227-301)||(24074372-24074446)
chr5 (421-535)||(17762545-17762658)
chr5 (421-535)||(23979164-23979277)
chr5 (227-269)||(6817388-6817430)
chr5 (227-301)||(27159192-27159266)
chr5 (422-535)||(31799642-31799754)
chr5 (162-213)||(24837496-24837547)
chr5 (155-213)||(14411690-14411748)
chr5 (231-301)||(17762355-17762425)
chr5 (227-301)||(29444875-29444949)
chr5 (227-272)||(994010-994055)
chr5 (421-535)||(6817125-6817237)
chr5 (160-213)||(24651026-24651079)
chr5 (421-535)||(24837171-24837284)
chr5 (227-272)||(41001617-41001662)
chr5 (422-535)||(18336720-18336831)
chr5 (227-270)||(20709478-20709521)
chr5 (421-470)||(4919056-4919105)
chr5 (227-272)||(4919254-4919299)
chr5 (313-354)||(6817200-6817241)
chr5 (422-532)||(7125923-7126031)
chr5 (160-213)||(7126244-7126297)
chr5 (227-272)||(18336537-18336582)
chr5 (308-349)||(20947056-20947097)
chr5 (160-213)||(24837167-24837220)
chr5 (227-272)||(24837433-24837478)
chr5 (422-532)||(27158996-27159104)
chr5 (314-354)||(993825-993865)
chr5 (422-470)||(14144165-14144213)
chr5 (314-354)||(14411926-14411966)
chr5 (161-213)||(17762282-17762334)
chr5 (352-408)||(20947069-20947124)
chr5 (314-354)||(24837247-24837287)
chr5 (422-470)||(29445070-29445118)
chr5 (318-354)||(29445070-29445106)
chr5 (314-358)||(30512361-30512405)
chr5 (314-358)||(30552701-30552745)
chr5 (160-294)||(31799882-31800019)
chr5 (227-294)||(14411766-14411833)
chr5 (228-295)||(24650940-24651007)
chr5 (482-535)||(993752-993806)
chr5 (227-269)||(20959358-20959400)
chr5 (163-213)||(41001679-41001729)
chr5 (163-212)||(4919317-4919366)
chr5 (160-213)||(14144228-14144281)
chr5 (314-347)||(17762542-17762575)
chr5 (160-213)||(17762609-17762662)
chr5 (421-470)||(20709278-20709327)
chr5 (313-354)||(20709290-20709331)
chr5 (313-354)||(23979160-23979201)
chr5 (160-213)||(24074301-24074354)
chr5 (313-354)||(24074561-24074602)
chr5 (316-353)||(28071759-28071796)
chr5 (421-470)||(30512353-30512402)
chr5 (421-470)||(30552693-30552742)
chr5 (227-272)||(32233968-32234013)
chr5 (227-272)||(41424585-41424630)
chr5 (314-354)||(4919068-4919108)
chr5 (236-272)||(7126077-7126113)
chr5 (317-349)||(14411780-14411812)
chr5 (421-469)||(14411929-14411977)
chr5 (236-272)||(18336638-18336674)
chr5 (313-349)||(20947017-20947053)
chr5 (313-349)||(22571160-22571196)
chr5 (422-470)||(24074566-24074614)
chr5 (161-213)||(27158990-27159042)
chr5 (318-354)||(27159068-27159104)
chr5 (318-354)||(31799718-31799754)
chr5 (486-533)||(31799965-31800013)
[»] chr1 (90 HSPs)
chr1 (227-470)||(30299297-30299540)
chr1 (227-470)||(4907031-4907274)
chr1 (227-535)||(39711076-39711381)
chr1 (161-534)||(17606307-17606685)
chr1 (227-535)||(39826119-39826422)
chr1 (227-470)||(24467694-24467936)
chr1 (235-535)||(52058088-52058384)
chr1 (227-532)||(48071966-48072270)
chr1 (227-535)||(18462288-18462593)
chr1 (161-535)||(29696567-29696936)
chr1 (227-452)||(13229816-13230040)
chr1 (227-532)||(33628759-33629063)
chr1 (227-458)||(20995747-20995977)
chr1 (227-535)||(39970715-39971022)
chr1 (227-451)||(42510083-42510307)
chr1 (230-470)||(43539413-43539653)
chr1 (160-460)||(33628688-33628992)
chr1 (227-470)||(8292870-8293116)
chr1 (227-349)||(34749206-34749328)
chr1 (228-402)||(7473862-7474032)
chr1 (351-470)||(34749299-34749417)
chr1 (290-395)||(215044-215149)
chr1 (227-296)||(17606377-17606446)
chr1 (421-535)||(39711335-39711448)
chr1 (161-272)||(24467628-24467742)
chr1 (227-301)||(16294182-16294256)
chr1 (241-294)||(18342261-18342314)
chr1 (421-535)||(33628692-33628805)
chr1 (230-301)||(33628925-33628996)
chr1 (227-301)||(4907197-4907271)
chr1 (227-301)||(8292873-8292947)
chr1 (227-269)||(30299300-30299342)
chr1 (227-301)||(39711141-39711215)
chr1 (227-301)||(43539416-43539490)
chr1 (422-532)||(17606572-17606679)
chr1 (421-535)||(39826052-39826165)
chr1 (161-272)||(18462285-18462399)
chr1 (227-282)||(30252152-30252207)
chr1 (227-270)||(39826312-39826355)
chr1 (421-535)||(4906964-4907077)
chr1 (425-470)||(18462551-18462596)
chr1 (421-470)||(24467890-24467939)
chr1 (421-470)||(30252161-30252210)
chr1 (421-470)||(34749203-34749252)
chr1 (227-272)||(48072030-48072075)
chr1 (227-272)||(52058272-52058317)
chr1 (227-295)||(39970886-39970954)
chr1 (351-469)||(16294140-16294258)
chr1 (482-535)||(18342339-18342393)
chr1 (227-265)||(29696633-29696671)
chr1 (227-301)||(34749340-34749414)
chr1 (421-470)||(8293070-8293119)
chr1 (313-354)||(16294206-16294247)
chr1 (160-213)||(20995696-20995749)
chr1 (236-301)||(20995747-20995812)
chr1 (313-354)||(24467886-24467927)
chr1 (160-213)||(29696563-29696616)
chr1 (421-470)||(30299494-30299543)
chr1 (160-213)||(48072288-48072341)
chr1 (313-354)||(52058089-52058130)
chr1 (161-213)||(4906961-4907013)
chr1 (318-354)||(17606572-17606608)
chr1 (314-354)||(29696818-29696858)
chr1 (161-213)||(39711399-39711451)
chr1 (154-213)||(17606296-17606355)
chr1 (314-349)||(39970729-39970764)
chr1 (482-535)||(20995700-20995754)
chr1 (421-467)||(29696821-29696867)
chr1 (482-535)||(29696879-29696933)
chr1 (486-535)||(30299234-30299284)
chr1 (421-459)||(52058088-52058126)
chr1 (184-213)||(4907289-4907318)
chr1 (229-266)||(13229803-13229840)
chr1 (317-354)||(17501993-17502030)
chr1 (227-272)||(17501994-17502039)
chr1 (161-202)||(34749137-34749178)
chr1 (506-535)||(39970647-39970676)
chr1 (421-470)||(39970712-39970761)
chr1 (314-354)||(4907040-4907080)
chr1 (313-349)||(7473875-7473911)
chr1 (314-354)||(8293067-8293107)
chr1 (161-213)||(8293135-8293187)
chr1 (236-272)||(17606490-17606526)
chr1 (422-470)||(20995932-20995980)
chr1 (314-354)||(30299491-30299531)
chr1 (161-213)||(33629017-33629069)
chr1 (314-354)||(39826128-39826168)
chr1 (236-272)||(42510174-42510210)
chr1 (488-535)||(52058013-52058061)
chr1 (161-201)||(52058347-52058387)
[»] scaffold0141 (4 HSPs)
scaffold0141 (227-535)||(8327-8631)
scaffold0141 (160-213)||(8323-8376)
scaffold0141 (421-470)||(8585-8634)
scaffold0141 (314-354)||(8582-8622)
[»] scaffold0809 (5 HSPs)
scaffold0809 (227-535)||(1413-1719)
scaffold0809 (227-301)||(1479-1553)
scaffold0809 (316-354)||(1672-1710)
scaffold0809 (484-535)||(1730-1782)
scaffold0809 (161-213)||(1733-1785)
[»] scaffold0185 (4 HSPs)
scaffold0185 (227-452)||(3938-4163)
scaffold0185 (482-535)||(3871-3925)
scaffold0185 (160-213)||(3867-3920)
scaffold0185 (240-272)||(4029-4061)
[»] scaffold0881 (3 HSPs)
scaffold0881 (227-453)||(289-514)
scaffold0881 (421-470)||(286-335)
scaffold0881 (314-347)||(305-338)
[»] scaffold0477 (4 HSPs)
scaffold0477 (227-359)||(4924-5057)
scaffold0477 (160-213)||(4878-4931)
scaffold0477 (314-354)||(5008-5048)
scaffold0477 (421-469)||(5011-5059)
[»] scaffold0449 (5 HSPs)
scaffold0449 (227-353)||(7295-7426)
scaffold0449 (351-535)||(7392-7576)
scaffold0449 (227-269)||(7466-7508)
scaffold0449 (421-535)||(7228-7341)
scaffold0449 (161-213)||(7527-7579)
[»] scaffold0176 (4 HSPs)
scaffold0176 (325-465)||(15800-15939)
scaffold0176 (229-301)||(15867-15939)
scaffold0176 (482-535)||(15950-16004)
scaffold0176 (160-213)||(15955-16008)
[»] scaffold0117 (3 HSPs)
scaffold0117 (227-302)||(12216-12291)
scaffold0117 (412-532)||(12236-12355)
scaffold0117 (167-213)||(12309-12355)
[»] scaffold0352 (5 HSPs)
scaffold0352 (160-213)||(4665-4718)
scaffold0352 (227-272)||(4736-4781)
scaffold0352 (318-354)||(4745-4781)
scaffold0352 (317-354)||(5941-5978)
scaffold0352 (227-272)||(5942-5987)


Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 99)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 160 - 535
Target Start/End: Complemental strand, 23705040 - 23704664
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn--ttagattttgtccctgtaatttcatattct 256  Q
    |||||||||||| |||||||||  |||||||||||||||||||| |||||||||  |||           ||||||||||||||||||||||||||||||    
T  23705040 tagggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 23704941  T
Q  257 tccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacca 356  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23704940 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 23704841  T
Q  357 aaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacgggg 456  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  |||  |||||| ||||||||||||||| ||||||||||||||||||| |||    
T  23704840 aaagtgggaggaatctgaaattacagggaagtaatttatgcagattctattgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacaggg 23704741  T
Q  457 acaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||| || ||||||           |||| || ||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  23704740 acaaaatgtaaatc---ttttttttacagtgagtaaaaccggaattcgctaatattacagggacgaaaagaggtatttac 23704664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 20458760 - 20459066
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20458760 ttagattttgtcgctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaa 20458859  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||  |||||  |||||||||    
T  20458860 aagtggaggaatctgaaattacaaggaccaaaagcgggaggaatctgaaattacagggacgtaatttatgcaaattctgttgacttgatcaaaggaggga 20458959  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaattcgcaaatattacatggacgaaaaga 526  Q
    |||||| ||||||||||||||||||| | ||||| |||||||||           ||||| |||||| | |||||| | ||||||||| |||||||||||    
T  20458960 ccaaaagtggaagaatctgaaattacagtgacaaaatctaaatc--tttttttttacaggtactaaaccggaattccctaatattacagggacgaaaaga 20459057  T
Q  527 ggtatttac 535  Q
    |||||||||    
T  20459058 ggtatttac 20459066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 20419605 - 20419913
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  20419605 ttagattttgtccctgtaatttcatattcttccatttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaa 20419704  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||  |||||| |||||||||    
T  20419705 aagtggaggaatatgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgaagattttgttgacttgatgaaaggaggga 20419804  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| | ||||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||||  ||||||||| |||| |||||    
T  20419805 ccaaaagtagaagaatctgaaattacagggacaaaatctaaatc-ttttttttttacagggactaaaaccggaattcgttaatattacagggacaaaaag 20419903  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  20419904 aggtatttac 20419913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 227 - 469
Target Start/End: Original strand, 38879793 - 38880035
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  38879793 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacataaaatgagggaccaa 38879892  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |  |||||||||||||||||| |  ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||| || |||||||||    
T  38879893 atttggaggaatctgaaattatagagaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattctgttgacttggtgaaaggaggga 38879992  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||    
T  38879993 ccaaaagtggaagaatctgaaattacagggacaaaatctaaat 38880035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 12006609 - 12006916
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  12006609 ttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaa 12006708  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||||||  | ||   ||||| |||||||||    
T  12006709 aagtggaggaatctgaaattacagtgaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggaggga 12006808  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaa-ccgaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||| | |||||||| ||||||||||| ||||||||    
T  12006809 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttatttacagggactaaaatcggaattcgctaatattacatgaacgaaaag 12006906  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  12006907 aggtatttac 12006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 41600027 - 41600334
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  41600027 ttagattttgtccctgtaatttcagattcttccacatttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaa 41600126  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||  | ||   ||||| |||||||||    
T  41600127 aagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggaggga 41600226  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| |||| |||||    
T  41600227 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttatttacagggactaaaaccggaattcgctaatattacagggacaaaaag 41600324  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  41600325 aggtatttac 41600334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 23383569 - 23383876
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  23383569 ttagattttgtccctataatttcatattcttccattttttgtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaa 23383668  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||||  |||||| |||||||||    
T  23383669 aagtgaaggaatttgaaattacaaggaccaaaagtgggaggaatctaaaattacaaggacgtagtttatgcagattctgttgacttgatgaaaggaggga 23383768  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaa-ccgaattcgcaaatattacatggacgaaaag 525  Q
    |||||  ||||||||| ||||||||| ||||||| |||||||||            |||||||||||| | |||||| | ||||||||| ||||||||||    
T  23383769 ccaaaggtggaagaatatgaaattacagggacaaaatctaaatctttttttttt--cagggactaaaatcagaattcactaatattacagggacgaaaag 23383866  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  23383867 aggtatttac 23383876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 48672348 - 48672655
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||| ||| ||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||| |||    
T  48672348 ttagatttcgtctctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggatcaa 48672447  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||  | |    ||||| |||||||||    
T  48672448 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatttgaaattacaaggacgtaattgatgcagattttgctaacgtgatgaaaggaggga 48672547  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| |||| || |||||||||           |||||||||||||||| ||||||| |||||||||  |||||||||    
T  48672548 ccaaaagtggaagaatctgaaattacagggataaaatctaaatc--tttttatttacagggactaaaaccgaaattcgctaatattacagagacgaaaag 48672645  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  48672646 aggtatttac 48672655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 230 - 451
Target Start/End: Original strand, 44816907 - 44817128
Alignment:
Q  230 gattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaag 329  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44816907 gattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaag 44817006  T
Q  330 tggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggacca 429  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||| |||| | |||||||||||||||||||  |||  |||||| || |||||||||    
T  44817007 tggaggaatctgaaattacaaggaccaaaagtggaaggaatttgaaactacatgtacgtaatttatgcagattctattgacttgatgaaaagagggacca 44817106  T
Q  430 aaaatggaagaatctgaaatta 451  Q
    ||| || |||||| ||||||||    
T  44817107 aaagtgaaagaatatgaaatta 44817128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 20963564 - 20963869
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  20963564 ttagatttagtccctgtaattttagattcttccacttttggtccctcattccgccacataagcagaatctgcatacatggcacgtaaaatgagggaccaa 20963663  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||   ||||| ||||| |||    
T  20963664 aagtggaagaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcaaattatgttgacgtgatgaaagga-gga 20963762  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| || |||||||||||||||| ||||| | ||||||||            ||||||||||||||| |||||||| ||||||||| |||| |||||    
T  20963763 ccaaaagtgaaagaatctgaaattacagggactaaatctaaat---tttatttttacagggactaaaaccggaattcgctaatattacagggacaaaaag 20963859  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  20963860 aggtatttac 20963869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 2597115 - 2596963
Alignment:
Q  9 agcaaaggaagggttttaaggatctaagattgacgagaatgaaattttgttctgaattaatcgaatgcaaagcttttgaaataattgaaaacttcgaaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  2597115 agcaaaggaagggttttaaggatctaagattgacgagaatgaaattttgttctgaattaatcgaatgcaaagcttgtgaaataattgcaaacttcgaaaa 2597016  T
Q  109 cttcatgaaaaagaatagtgcactgtgcttgtttttccatatagataaatgta 161  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2597015 cttcatgaaaaagaatagtgcactgtgcttgtttttccagatagataaatgta 2596963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 10409683 - 10409440
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||| ||||||||| | ||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||| |||    
T  10409683 ttagattttgtctctgtaattttagattcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcatgtaaaatgagggatcaa 10409584  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||  | ||   ||||| ||| |||||    
T  10409583 aagtggaggaatctgaaattacaaggaccaaaagtaggaggaatctgaaattacaaggacgtaattgatgcagattttgctgaagtgatgaaagaaggga 10409484  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    | |||| | |||||||||||||||||  |||||| |||||||||    
T  10409483 ctaaaagtagaagaatctgaaattacaaggacaaaatctaaatc 10409440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 28218248 - 28218539
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||                ||||||||||    
T  28218248 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcat----------------gagggaccaa 28218331  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||   ||||| |||||||||    
T  28218332 aagtggagtaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggaggga 28218431  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  28218432 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttatttacagggactaaaaccggaattcgctaatattacagggacgaaaag 28218529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 31851308 - 31851548
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| ||||  |||||||||||||| ||||||||||| || ||  || |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  31851308 ttagattctgtcattgtaatttcatatttttccacttttgatctctcttttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaa 31851407  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||| ||| |||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||| |||| | ||   ||||| |||||| ||    
T  31851408 aagtggagaaatatgaaattacagggatcaaaattgagaggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagaga 31851507  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |||||| ||||||||| ||||||||| ||||||| ||||||    
T  31851508 ccaaaagtggaagaatatgaaattacagggacaaaatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 227 - 386
Target Start/End: Complemental strand, 24195105 - 24194941
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaa-----atgaggg 321  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||  |||||||     |||||||    
T  24195105 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagcagaatctgcatacatgatacgtaaaatgaaatgaggg 24195006  T
Q  322 accaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggac 386  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  24195005 accaaaagtggaggaatctgaaattatagggaccaaaagtgagaggaatctgaaattacagggac 24194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 231 - 470
Target Start/End: Original strand, 1250279 - 1250518
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt 330  Q
    ||||||||| | |||||| | |||||||||||||||||| || |||||||||||| ||| |||||| |||||||| || ||||||||| |||  ||||||    
T  1250279 attttgtccttttaattttagattcttccacttttggtctctcattccaccacgtcagctgaatctgcatacatgtcatgtaaaatgaaggattaaaagt 1250378  T
Q  331 ggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaa 430  Q
    |||||||| || |||||||  |||||||| | |||||||| ||||||||||||||||||||||||||||||||   ||   ||||| |||||||||||||    
T  1250379 ggaggaatatggaattacagtgaccaaaaataggaggaatttgaaattacagggacgtaatttatgcagattcttctgacgtgatgaaaggagggaccaa 1250478  T
Q  431 aaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    || ||||||||| ||||||||  ||||||| |||||||||    
T  1250479 aagtggaagaatatgaaattaaagggacaaaatctaaatc 1250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 25772432 - 25772559
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  25772432 ttagattttgtccttgtaatttcatattcttccacttttgttccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaa 25772531  T
Q  327 aagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||||||||||||||    
T  25772532 aagtggaggaatctgaaattacaaggac 25772559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 227 - 465
Target Start/End: Original strand, 7658040 - 7658276
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| ||||| |||||||||| |||||| |||||||||||| |  || || ||||| |||| ||||| ||| |||| ||||||||||||||||| ||    
T  7658040 ttagattatgtccatgtaatttcaaattcttacacttttggtccatcctttcatcacgtcagcaaaatctgcat-catgtcacgtaaaatgagggactaa 7658138  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||| || ||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||  | ||   ||||| |||||| ||    
T  7658139 aagtagatgaatctgaaatta-aaggaccaaaagtgggaggaatatgaaattacagggacataatttatgcagattttgctgacgtgatgaaaggagaga 7658237  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatct 465  Q
    |||||| ||||||||||| ||||||| ||||||| ||||    
T  7658238 ccaaaagtggaagaatcttaaattacagggacaaaatct 7658276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 241 - 403
Target Start/End: Complemental strand, 33162830 - 33162668
Alignment:
Q  241 tgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatct 340  Q
    |||||||||| |||||||||||||| |||  | ||| |||||||| |||||||||| |||||||||||| ||||||||||||||||||||| || |||||    
T  33162830 tgtaatttcaaattcttccacttttagtctttcatttcaccacgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatct 33162731  T
Q  341 gaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattc 403  Q
    ||||||||| ||||||||||||| |||||| |||||||||| | ||||||||||| |||||||    
T  33162730 gaaattacacggaccaaaagtggaaggaatttgaaattacaagaacgtaatttatacagattc 33162668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 48648330 - 48648457
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||| || || ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  48648330 ttagattttgtccctgtaatttcagattttttcatttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaaggagggaccaa 48648429  T
Q  327 aagtggaggaatctgaaattacaaggac 354  Q
    || |||||||||||||||||||| ||||    
T  48648430 aattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 313 - 535
Target Start/End: Complemental strand, 6466077 - 6465857
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgtt 412  Q
    |||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||   ||   |    
T  6466077 aaatgagggaccaaaagtggagtaatatgaaattacagggatcaaaagtgggaggaatttgaaattacagggacataatttatgcagattcttctgacgt 6465978  T
Q  413 gatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatatt 511  Q
    |||| ||||||||||||||| |||||||||||||||||||  | |||  ||||||||            ||||||||||||||| |||||||| ||||||    
T  6465977 gatgaaaggagggaccaaaagtggaagaatctgaaattacaagaacataatctaaat---attttttttacagggactaaaaccggaattcgctaatatt 6465881  T
Q  512 acatggacgaaaagaggtatttac 535  Q
    ||||||||||||| || |||||||    
T  6465880 acatggacgaaaaaagatatttac 6465857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 25772525 - 25772643
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||  |||||| ||||||||||||||| | |||||||||||||||    
T  25772525 ggaccaaaagtgg-aggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaatt 25772623  T
Q  451 acggggacaacatctaaatc 470  Q
    || ||||||| |||||||||    
T  25772624 acagggacaaaatctaaatc 25772643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 26820255 - 26820398
Alignment:
Q  17 aagggttttaaggatctaagattgacgagaatgaaattttgttctgaattaatcgaatgcaaagcttttgaaataattgaaaacttcgaaaacttcatga 116  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||||| | ||||| |||| |||||||  |||||||||| ||||| | ||||||||||||    
T  26820255 aagggttttaaggatttaagatcgacgagaataaaattttgttctgtagtaatcaaatgtaaagcttgcgaaataattgcaaactcctaaaacttcatga 26820354  T
Q  117 aaaagaatagtgcactgtgcttgtttttccatatagataaatgt 160  Q
    ||     | ||||| ||||| |||||||||||||||||||||||    
T  26820355 aatttttttgtgcattgtgcatgtttttccatatagataaatgt 26820398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 48648434 - 48648541
Alignment:
Q  363 ggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaaca 462  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||   ||||| |||||||||||| || ||||||||||| |||||||   ||||| |    
T  48648434 ggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaatctaaaattacatagacaaaa 48648533  T
Q  463 tctaaatc 470  Q
    ||||||||    
T  48648534 tctaaatc 48648541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 16995268 - 16995337
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatct 296  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||| ||||||||||    
T  16995268 ttagattttgtccctgtaatttcagattcttccacttttggtcccacattccaccacgtcagcagaatct 16995337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 28218294 - 28218180
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||||||           |||||||||||||||| ||||||| ||||||||| ||||    
T  28218294 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttt-acagggactaaaaccggaattcgctaatattacagggac 28218196  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  28218195 gaaaagaggtatttac 28218180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 20419651 - 20419538
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggac 519  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||| | ||||    
T  20419651 gagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatc--tttttttttacagggactaaaaccggaattcgctaatattatagggac 20419554  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  20419553 gaaaagaggtatttac 20419538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 28218545 - 28218427
Alignment:
Q  158 tgtagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn---ttagattttgtccctgtaatttcatat 253  Q
    |||||||||||||| |||||||||  |||||||||||||||||||| |||||||||  |||            |||||||||||||||||||||||| ||    
T  28218545 tgtagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagat 28218446  T
Q  254 tcttccacttttggtccct 272  Q
    |||||||||||||||||||    
T  28218445 tcttccacttttggtccct 28218427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 1250515 - 1250441
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  || || ||||| || ||||||| ||||    
T  1250515 ttagattttgtccctttaatttcatattcttccacttttggtccctcctttcatcacgtcagaagaatctgcata 1250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 31851548 - 31851506
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtc 31851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 38880033 - 38879959
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  || ||||| || | |||||||| ||||    
T  38880033 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcaccaagtcaacagaatctgcata 38879959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 12006849 - 12006804
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  12006849 ttagattttgtccctgtaatttcagattcttccacttttggtccct 12006804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 23383809 - 23383764
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  23383809 ttagattttgtccctgtaatttcatattcttccacctttggtccct 23383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 23704924 - 23705036
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||           |||||||||||||||| ||||||| |||||||||  |||    
T  23704924 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttt---acagggactaaaaccggaattcgctaatattacagagac 23705020  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  23705021 gaaaagaggtatttac 23705036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 41600267 - 41600222
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  41600267 ttagattttgtccctgtaatttcagattcttccacttttggtccct 41600222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 272
Target Start/End: Original strand, 23704662 - 23704775
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn--ttagattttgtccctgtaatttcatattcttc 258  Q
    |||||||||| |||||||||  |||||||||||||||||||| |||||| ||| |||           ||| |||||||||||||||||||| |||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaaaagatttacattttgtccctgtaatttcagattcttc 23704761  T
Q  259 cacttttggtccct 272  Q
    ||||||||||||||    
T  23704762 cacttttggtccct 23704775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 534
Target Start/End: Complemental strand, 7658095 - 7657972
Alignment:
Q  412 tgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatat 510  Q
    ||||| ||||| ||||||||| || |||||| |||||||||  |||||  |||||||||           ||||||| |||||||||| ||||| |||||    
T  7658095 tgatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataatctaaatctttttttttttacagggattaaaaccgaaattcgctaatat 7657996  T
Q  511 tacatggacgaaaagaggtattta 534  Q
    ||||||||||||||||||||||||    
T  7657995 tacatggacgaaaagaggtattta 7657972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 20419845 - 20419800
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  20419845 ttagattttgtccctgtaatttcagattcttctacttttggtccct 20419800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 20459000 - 20458955
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||    
T  20459000 ttagattttgtcactgtaatttcagattcttccacttttggtccct 20458955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 25772640 - 25772595
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  25772640 ttagattttgtccctgtaatttcagattcttctacttttggtccct 25772595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 44816950 - 44816833
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||| |||||           |||| ||||||||||| ||||||| ||||||||| ||||    
T  44816950 gagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaaatctttttttttttacagagactaaaaccgaaattcgctaatattacagggac 44816851  T
Q  520 --gaaaagaggtatttac 535  Q
      ||||||||||||||||    
T  44816850 gagaaaagaggtatttac 44816833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 48672588 - 48672543
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||    
T  48672588 ttagattttatccctgtaatttcagattcttccacttttggtccct 48672543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 535
Target Start/End: Complemental strand, 16995312 - 16995202
Alignment:
Q  423 gggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacga 521  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||            ||||| |||||||||| ||||||| |||||||||  |||||    
T  16995312 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat---attttttttacaggaactaaaaccgaaattcgctaatattacagagacga 16995216  T
Q  522 aaagaggtatttac 535  Q
    ||||||||||||||    
T  16995215 aaagaggtatttac 16995202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 28218177 - 28218229
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  28218177 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 28218229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 10409695 - 10409749
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||    
T  10409695 acagggactaaaatcggaattcgctaatattacatggatgaaaagaggtatttac 10409749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 12006655 - 12006543
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaa-ccgaattcgcaaatattacatggac 519  Q
    |||||| ||||| ||||||||||||||||||| ||||||| |||||| |            ||||||||||||| | |||||||| ||||||||| ||||    
T  12006655 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaatt---tttttttttacagggactaaaatcggaattcgctaatattacagggac 12006559  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  12006558 gaaaagaggtatttac 12006543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 38879723 - 38879773
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt 212  Q
    |||||||||| |||||||||  ||||||||||||||||||||| |||||||    
T  38879723 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagt 38879773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 48672394 - 48672279
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggac 519  Q
    |||||| ||||| ||||||||||||||||||| | ||| | |||||||||           |||| ||||||||||||| ||| | ||||||||| ||||    
T  48672394 gagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaatctttttttttttacagagactaaaaccgaaattcactaatattacagggac 48672295  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  48672294 gaaaagaggtatttac 48672279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 12006539 - 12006592
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  ||||||||||||||||||||  ||||||||    
T  12006539 tagggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtc 12006592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 12006920 - 12006867
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| ||||||||||  |||||||||||||||||||  ||||||||    
T  12006920 tagggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtc 12006867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 20458690 - 20458743
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||||| |||||||  ||||||||||| |||||||| |||||||||    
T  20458690 tagggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtc 20458743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 20963873 - 20963820
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||| ||  |||||||||||||||||||| |||||||||    
T  20963873 tagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtc 20963820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 38879839 - 38879790
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  38879839 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 38879790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 48648376 - 48648327
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||||||| || ||||||||||||| ||||||| |||||||||    
T  48648376 gagggaccaaaaatgaaaaaatctgaaattacagggacaaaatctaaatc 48648327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 48672659 - 48672606
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||||||||||||| | |||||||||    
T  48672659 tagggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtc 48672606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 7658276 - 7658236
Alignment:
Q  229 agattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  7658276 agattttgtccctgtaatttaagattcttccacttttggtc 7658236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 20419732 - 20419696
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20419732 gtccctgtaatttcatattcctccacttttggtccct 20419696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 20458806 - 20458758
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||||||||| ||||||||||||||||||| | ||||| ||||||||    
T  20458806 gagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaat 20458758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 20963691 - 20963655
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||| ||||||||||||||||||||||||||||||||    
T  20963691 gtccttgtaatttcatattcttccacttttggtccct 20963655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 24195056 - 24195096
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  24195056 aatgagggaccaaaagtggaagaatatgaaattacaaggac 24195096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 28218297 - 28218257
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  28218297 aatgagggaccaaaagtggaagaatctgaaattacagggac 28218257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 33162915 - 33162863
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  |||||||||||||||||| | |||||||||    
T  33162915 agggtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtc 33162863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 41600337 - 41600285
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||| ||  |||||||||||||||||||| |||||||||    
T  41600337 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtc 41600285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 44816953 - 44816913
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  44816953 aatgagggaccaaaagtggaagaatctgaaattacagggac 44816913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 20419536 - 20419587
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||| |||||||||  || ||||||||||||||||| |||||||||    
T  20419536 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 20419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 349
Target Start/End: Complemental strand, 20458809 - 20458774
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    |||||||||||||||||||| |||||||||||||||    
T  20458809 aatgagggaccaaaagtggaagaatctgaaattaca 20458774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 20963803 - 20963760
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtcc 270  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||    
T  20963803 ttagatttagtccctgtaatttcagattctttcacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 23383499 - 23383550
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||| |||||||||  |||||||||||| ||||||| |||||||||    
T  23383499 gggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtc 23383550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 38880099 - 38880048
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||| |||||||||  ||||||||||||| |||||| |||||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc 38880048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 44817142 - 44817099
Alignment:
Q  229 agattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||    
T  44817142 agattttgtccttataatttcatattctttcacttttggtccct 44817099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 6465923 - 6465997
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||| ||| | |||||||||| |||||||||||||||||||||  || || ||||| || ||||||| ||||    
T  6465923 ttagattatgttcttgtaatttcagattcttccacttttggtccctcctttcatcacgtcagaagaatctgcata 6465997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 7658287 - 7658341
Alignment:
Q  482 acagggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||| ||||||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  7658287 acagagactaaaaccgaaattcgttaatattacagggacgaaaagaggtatttac 7658341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 16995200 - 16995250
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt 212  Q
    |||||||||| |||||||||  |||||||||||||||||| | ||||||||    
T  16995200 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagt 16995250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 24194932 - 24194978
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttc-cacttttggtccct 272  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||    
T  24194932 ttagattttgtccctgtaatttcagattcctctcacttttggtccct 24194978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 24195050 - 24195108
Alignment:
Q  412 tgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||| || |||||||||||| ||||||||| |||||||||  |||||| |||||||||    
T  24195050 tgatggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24195108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 535
Target Start/End: Original strand, 24195210 - 24195248
Alignment:
Q  497 gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  24195210 gaattcgctaatattacagggacgaaaagaggtatttac 24195248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 535
Target Start/End: Complemental strand, 38879763 - 38879725
Alignment:
Q  497 gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  38879763 gaattcgctaatattacagggacgaaaagaggtatttac 38879725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 535
Target Start/End: Complemental strand, 41600010 - 41599960
Alignment:
Q  486 ggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||| ||||| ||||||||| ||| ||||||||||||||||    
T  41600010 ggactaaaaccgaaattcgctaatattacagggatgaaaagaggtatttac 41599960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 8994250 - 8994201
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagtttta 210  Q
    ||||||||||||| |||||||| || |||||||| |||||| ||||||||    
T  8994250 agggtaaatacattttttcgttcctctaatattaacgaatttcagtttta 8994201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 10409443 - 10409488
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||| |||||||||| ||||||| |||||| ||||||    
T  10409443 ttagattttgtccttgtaatttcagattcttctacttttagtccct 10409488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 20963610 - 20963561
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||||| ||||||| ||||| | |||||||||    
T  20963610 gagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatc 20963561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 23383615 - 23383566
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||| |||||||||||||| ||||||||  ||||||| |||||||||    
T  23383615 gagggacaaaaaatggaagaatatgaaattatagggacaaaatctaaatc 23383566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 535
Target Start/End: Complemental strand, 25772403 - 25772366
Alignment:
Q  498 aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  25772403 aattcgctaatattacagggacgaaaagaggtatttac 25772366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 25772711 - 25772658
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||  |||||||||  || ||||||||| |||||||||||||||||    
T  25772711 tagggtaaatatctcttttcgtccctataatattagtgaattccagttttagtc 25772658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 535
Target Start/End: Original strand, 38880048 - 38880097
Alignment:
Q  487 gactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||||||| |||| || ||||||||| ||||||||||||||||||||    
T  38880048 gactaaaaccggaatttgctaatattacagggacgaaaagaggtatttac 38880097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 48672275 - 48672328
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||||||| ||||| | |||||||||    
T  48672275 tagggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtc 48672328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 1250561 - 1250533
Alignment:
Q  185 tgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||||||||||||||||||||    
T  1250561 tgtaatattagcgaattccagttttagtc 1250533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 12006658 - 12006618
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  12006658 aatgagggatcaaaagtggaagaatctgaaattacagggac 12006618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 16995317 - 16995277
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||| ||||||||||||||| ||||||||||||||| ||||    
T  16995317 aatgtgggaccaaaagtggaagaatctgaaattacagggac 16995277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 20459070 - 20459022
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttt 208  Q
    |||||||||||| |||||||||  |||||||||||| ||||||| ||||    
T  20459070 tagggtaaatacctcttttcgtccctgtaatattagggaattccggttt 20459022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 20963613 - 20963573
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||||| |||||||| ||||    
T  20963613 aatgagggaccaaaagtggaagaatctaaaattacagggac 20963573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 23704843 - 23704879
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  23704843 gtccctgtaatttcagattcctccacttttggtccct 23704879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 23704921 - 23704961
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  23704921 aatgagggaccaaaagtggaagaatatgaaattacagggac 23704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 24195250 - 24195210
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattc 202  Q
    |||||||||| |||||||||  |||||||||||||||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatattagcgaattc 24195210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 25772363 - 25772403
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaatt 201  Q
    ||||||||||| |||||||||  ||||||||||||||||||    
T  25772363 agggtaaatacctcttttcgtccctgtaatattagcgaatt 25772403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 25772481 - 25772441
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||| |||||||||| |||| |||||||||||||||    
T  25772481 aatgagggaacaaaagtggaagaatatgaaattacaaggac 25772441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 38879842 - 38879802
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  38879842 aatgagggaccaaaagtggaagaatatgaaattacagggac 38879802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 41600073 - 41600025
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||| ||||  ||||||||||||||||||| ||||||| ||||||||    
T  41600073 gagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaat 41600025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 458
Target Start/End: Original strand, 48648417 - 48648457
Alignment:
Q  418 aaggagggaccaaaaatggaagaatctgaaattacggggac 458  Q
    ||||||||||||||| |||| |||||||||||||| |||||    
T  48648417 aaggagggaccaaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 112)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 21633205 - 21632903
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  21633205 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaa 21633106  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||||    
T  21633105 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggaggga 21633006  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaattcgcaaatattacatggacgaaaaga 526  Q
    |||||| || |||||||||||||||| ||||||||||||| |||           ||||||||||||    ||||||| ||||||||| |||||||||||    
T  21633005 ccaaaagtgaaagaatctgaaattacagggacaacatctagatc--tttttttttacagggactaaa----aattcgctaatattacagggacgaaaaga 21632912  T
Q  527 ggtatttac 535  Q
    |||||||||    
T  21632911 ggtatttac 21632903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 19112834 - 19113141
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  19112834 ttagattttgtccctggaatttcatattcttccacttttggtcccttattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaa 19112933  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||  |||||| |||||||||    
T  19112934 aagtggagaaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggaggga 19113033  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| | ||||||||||||||||| |||| || |||||||||           ||||||||||||||| |||||||  ||||||| | ||||||||||    
T  19113034 ccaaaagtagaagaatctgaaattacagggataaaatctaaatc--tttttttttacagggactaaaaccggaattcgttaatattatagggacgaaaag 19113131  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  19113132 aggtatttac 19113141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 161 - 535
Target Start/End: Original strand, 9266974 - 9267350
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn---ttagattttgtccctgtaatttcatattct 256  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||||||  |||            ||||||||||||||||||||||||||||||    
T  9266974 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 9267073  T
Q  257 tccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacca 356  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9267074 tccacttttggtccctcattccagcacgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacca 9267173  T
Q  357 aaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacgggg 456  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||||  |||||| ||||||||||||||| | ||||||||||| ||||| |||    
T  9267174 aaagtgggaggaatctgaaattacaaggacttaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgatattacaggg 9267273  T
Q  457 acaacatctaaatcnnnnnnnnnnnacagggactaaaa-ccgaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||| |||||||             ||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||    
T  9267274 acaaaatctaaa---aaatttatatacagggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttac 9267350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 160 - 535
Target Start/End: Complemental strand, 16722371 - 16721993
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn---ttagattttgtccctgtaatttcatattc 255  Q
    |||||||||||| |||||||||  |||||||||||||||||| |||||||||||  |||            |||||||||||||||||||||||||||||    
T  16722371 tagggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattc 16722272  T
Q  256 ttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacc 355  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16722271 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 16722172  T
Q  356 aaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggg 455  Q
    | ||||||||||||||||||||||||| ||| |||||||||||||||| ||||  |||||| ||| ||||||||||| |||||||||||||||||||  |    
T  16722171 agaagtgggaggaatctgaaattacagtgacataatttatgcagattctgttgacttgatgaaagaagggaccaaaagtggaagaatctgaaattacatg 16722072  T
Q  456 gacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||| ||||||||            |||| |||||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  16722071 gacaaaatctaaat--ttttttttttacagtgactaaaaccggaattcgctaatattacagggacgaaaagaggtatttac 16721993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 20853765 - 20854071
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  20853765 ttagattttgtccctataatttcatattcttccacttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaatgagggaccaa 20853864  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||| ||| |||||||||||||||  ||||  |||||| |||||||||    
T  20853865 aagtggaggaatctaaaattacagagaccagaagtgggaggaatctgaaattacagtgacataatttatgcagattatgttgacttgatgaaaggaggga 20853964  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||           ||| |||||||||||| ||||||| ||||||||||||||||||||    
T  20853965 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttttttaca-ggactaaaaccgaaattcgctaatattacatggacgaaaag 20854061  T
Q  526 aggtatttac 535  Q
    || |||||||    
T  20854062 agatatttac 20854071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 231 - 535
Target Start/End: Complemental strand, 45970220 - 45969917
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt 330  Q
    |||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  45970220 attttgtccctgtaatttcagattcttccacttttggttccccattccaccacgtaagcagaatccgcatacatgacacgtaaaatgagggaccaaaagt 45970121  T
Q  331 ggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaa 430  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| |||||| ||||||    
T  45970120 ggagaaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagagaccaa 45970021  T
Q  431 aaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggt 529  Q
    || || |||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||| | ||||||||| ||||||||||||||    
T  45970020 aagtgaaagaatctgaaattacagggacaaaatctaaatc--tttttttttacagggactaaaaccggaattcactaatattacagggacgaaaagaggt 45969923  T
Q  530 atttac 535  Q
    ||||||    
T  45969922 atttac 45969917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 30500110 - 30500416
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  30500110 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaa 30500209  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||  | ||   ||||| |||||||||    
T  30500210 aagtgaaggaatttgaaattacatggaccaaaagtgggaggaatctgaaattacagggatgtaatttatgtagattttgctgacgtgatgaaaggaggga 30500309  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaac-cgaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||| ||| ||||||||| ||||||| ||||||||            ||||||||||||||  |||||||| ||||||||| ||||||||||    
T  30500310 ccaaaagtggaacaatatgaaattacagggacaaaatctaaat---tttttttttacagggactaaaactggaattcgctaatattacagggacgaaaag 30500406  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  30500407 aggtatttac 30500416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 14262105 - 14262412
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||||||||||    
T  14262105 ttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaa 14262204  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||||||| | ||   ||||| |||||||||    
T  14262205 aagtggaggaatttgaaattacagggatcaaaagtggaaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggaggga 14262304  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    | |||| ||||| ||| ||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  14262305 ctaaaagtggaacaatatgaaattacagggacaaaatctaaatc--tttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaag 14262402  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  14262403 aggtatttac 14262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 49986836 - 49986529
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  49986836 ttagattttgtct-tgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaa 49986738  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||  ||   |||||| |||||| ||    
T  49986737 aagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctattaaattgatgaaaggagaga 49986638  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| | ||||||||||||||||| ||||||| |||||||||           |||| |||||||||| |||||| | ||||||||| ||||||||||    
T  49986637 ccaaaagtagaagaatctgaaattacagggacaaaatctaaatc-ttttttttttacagtgactaaaaccggaattctctaatattacagggacgaaaag 49986539  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  49986538 aggtatttac 49986529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 14171655 - 14171962
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  14171655 ttagattttgtccctgtaatttcaaattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaa 14171754  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||  | ||   ||||| ||||| |||    
T  14171755 aaatggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggtcgtaattgatgcagattttgctgacgtgatgaaaggaagga 14171854  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| |||||||||| |||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  14171855 ccaaaagtggaagaatcagaaattacagggacaaaatctaaatc--tttttatttacagggactaaaaccggaattcgctaatattacagggacgaaaag 14171952  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  14171953 aggtatttac 14171962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 45003805 - 45003562
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||    
T  45003805 ttagatttagtccctataatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcatgtaaaatgagggatcaa 45003706  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||   ||||| |||||||||    
T  45003705 aagtggaggaatatgaaattacagggaacaaaagtgggaggaatctgaaattacaaggacgtaatttatacagattctgttgacgtgatgaaaggaggga 45003606  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    | |||| ||||||||||||||||||| ||||||| |||||||||    
T  45003605 caaaaagtggaagaatctgaaattacagggacaaaatctaaatc 45003562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 5800914 - 5800607
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| | |||| ||| | ||||||||||| |||||||||||||||||    
T  5800914 ttagattttgtccttgtaatttcatattcttccacttttggtcccttattccaccacttcagcaaaatttgcatacatggcatgtaaaatgagggaccaa 5800815  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || ||||||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| | ||   ||||| |||||||||    
T  5800814 aaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggaggga 5800715  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||||||||||||| ||||||||| ||||||  |||||||||           |||||||||||||||| ||||||  ||||||||| ||||||||||    
T  5800714 ccaaaaatggaagaatatgaaattacagggacataatctaaatc--cttttttttacagggactaaaaccgaaattcgttaatattacagggacgaaaag 5800617  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  5800616 aggtatttac 5800607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 15328769 - 15328529
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||| |||| ||| ||||||||||||| ||||||    
T  15328769 ttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaa 15328670  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||| || ||||||    
T  15328669 aagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagaggga 15328570  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |  ||| ||||||||| ||||||||| ||||||| ||||||    
T  15328569 cacaaactggaagaatatgaaattacagggacaaaatctaa 15328529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 14162180 - 14161937
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| |||| ||| | |||||||||||||||||||||||||||||    
T  14162180 ttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaa 14162081  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || ||||||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| | ||   ||||| |||||||||    
T  14162080 aaatggaggaatttgaaattacagggaccaaaattaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggaggga 14161981  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||||||| ||||||||| ||||||  |||||||||    
T  14161980 ccaaaagtggaagaatatgaaattacagggacataatctaaatc 14161937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 160 - 452
Target Start/End: Original strand, 35995676 - 35995972
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnntt---agattttgtccctgtaatttcatattc 255  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||  |||         ||   |||||||||||||||||||||| ||||    
T  35995676 tagggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattc 35995775  T
Q  256 ttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacc 355  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||| ||||     
T  35995776 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaacatgaaattacagggaca 35995875  T
Q  356 aaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattac 452  Q
    ||||||||||||||||| ||  |||| ||||||||||||||||||||| |  |   ||||| ||| ||||||||||| |||||||||||||||||||    
T  35995876 aaaagtgggaggaatctaaatatacaaggacgtaatttatgcagattctgcggacgtgatgaaagaagggaccaaaagtggaagaatctgaaattac 35995972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 52552761 - 52553064
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| || |||||||||| |||||||| ||||||||||||||||||||    
T  52552761 ttagattttgtccctgtaatttcagattcttccacttttgatcccttattccaccatgtcagcagaatctgcatacatgacacgtaaaatgagggaccaa 52552860  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||| |||||| |||||||||| |||||||    |||||||||||||||||||||||||||||||||||||||||| | ||   ||||| |||||||||    
T  52552861 aagtgaaggaatttgaaattacagggaccaa----gggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggaggga 52552956  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaac-cgaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| | ||||| |||||||||           ||||||||||||||  |||||||| ||||||||| ||||||||||    
T  52552957 ccaaaagtggaagaatatgaaattacagagacaaaatctaaatc--tttttttttacagggactaaaactagaattcgctaatattacaaggacgaaaag 52553054  T
Q  526 aggtatttac 535  Q
    | ||||||||    
T  52553055 atgtatttac 52553064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 43572700 - 43572391
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| | || ||| ||||||||||||||||||||    
T  43572700 ttagattctgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaatgacacgtaaaatgagggaccaa 43572601  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttg---tgttgatgtaaggag 423  Q
    |||||||| ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||  ||||||||| | ||   || ||||| ||||||    
T  43572600 aagtggagtaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggacgtaattg-tgcagattctgctgacttgatgatgaaaggag 43572502  T
Q  424 ggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaa 522  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||            |||||||||||||||| ||||||| ||||||||| | |||||    
T  43572501 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat--ttttctttttacagggactaaaaccgaaattcgctaatattacaggaacgaa 43572404  T
Q  523 aagaggtatttac 535  Q
    |||| ||||||||    
T  43572403 aagatgtatttac 43572391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 33372713 - 33372408
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||| |||||||||| ||||| || |||||||||||||||| |||    
T  33372713 ttagattttgtccctgtaatttcagattcttccacttttgatcccc-attccaccacgtcagcagaatctgcatac-tgacacgtaaaatgagggatcaa 33372616  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||||||| |||| ||||| |||||||||  | ||   ||||| |||||||||    
T  33372615 aagtggaggaatatgaaattacagagaccaaaagtgggaggaatctgaaattacaaggacttaattgatgcagattttgctgacgtgatgaaaggaggga 33372516  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||| ||||||||||||| ||||||| |||||||||           ||||| ||||||||| |||||||| ||||||||| ||||||||||    
T  33372515 ccaaaagtggaataatctgaaattacagggacaaaatctaaatc--tttttatttacaggaactaaaaccagaattcgctaatattacagggacgaaaag 33372418  T
Q  526 aggtatttac 535  Q
    || |||||||    
T  33372417 agatatttac 33372408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 227 - 469
Target Start/End: Original strand, 17465436 - 17465678
Alignment:
Q  227 ttagattttgtc-cctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggacca 325  Q
    |||||||| ||| |||||||||||| ||||||||| ||||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17465436 ttagatttcgtctcctgtaatttcagattcttccatttttgatctctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggacca 17465535  T
Q  326 aaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggg 425  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| | |||  ||||   ||||| ||||||||    
T  17465536 aaagtggaggaatatgaaattac-aggaccaaaagtgggaggaatctgaaattacagagacgtaatttatgtaaattttgttgacgtgatgaaaggaggg 17465634  T
Q  426 accaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    ||||||| || |||||||| || |||| ||||||| || |||||    
T  17465635 accaaaagtgaaagaatctaaagttacagggacaaaatttaaat 17465678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 227 - 469
Target Start/End: Complemental strand, 38283859 - 38283617
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||| ||| || ||||| |||||||||| |||||||||||||||||||||||||||||    
T  38283859 ttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaa 38283760  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||| |||||| | ||   ||||| |||||||||    
T  38283759 aagtggaggaatttgaaattacacggacaaaaagtgggaggaatcttaaattacagggacgtaacttatgtagattctgctgacgtgatgaaaggaggga 38283660  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
     ||||| ||||| ||| ||||||||  || |||| ||||||||    
T  38283659 tcaaaagtggaacaatatgaaattataggaacaaaatctaaat 38283617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 227 - 449
Target Start/End: Original strand, 4204777 - 4204999
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  4204777 ttagattatgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaa 4204876  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||| ||| ||||||||||  |||||| ||||||||||||||||||||| | ||| |||||||||||||||||   ||   ||||  || ||||||    
T  4204877 aagtggagtaatatgaaattacagagaccaatagtgggaggaatctgaaattatatggatgtaatttatgcagattctactgacgtgataaaaagaggga 4204976  T
Q  427 ccaaaaatggaagaatctgaaat 449  Q
     ||||| ||||||||||||||||    
T  4204977 tcaaaagtggaagaatctgaaat 4204999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 47575342 - 47575581
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||   |||||||| |||||||| |||||||||||||| |||||||||||  |||||||||| ||||||||||||||||||||||||| |||    
T  47575342 ttagattttgtttatgtaattttatattctttcacttttggtccct-attccaccacggcagcagaatctgcatacatggcacgtaaaatgagggatcaa 47575440  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| |||| |||| |||||||||| ||||||||||||||  |||||||||||||||| | ||   ||||| |||||| ||    
T  47575441 aagtggaggaatttgaaattacagggacaaaaaatgggaggaatttgaaattacagggatataatttatgcagattctgctgacgtgatgaaaggagaga 47575540  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |||||| | ||| ||||||||||||| | ||||| ||||||    
T  47575541 ccaaaagttgaaaaatctgaaattacagagacaaaatctaa 47575581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 325 - 535
Target Start/End: Complemental strand, 11003943 - 11003734
Alignment:
Q  325 aaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagg 424  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||  ||||  |||||| ||||| |    
T  11003943 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcatattttgttgacttgatgaaaggatg 11003844  T
Q  425 gaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaa 523  Q
    |||||||| |||||||||||||||||||  |||||| |||||| ||           ||||||||||||||| |||||||  ||||||||| |||| |||    
T  11003843 gaccaaaagtggaagaatctgaaattacaaggacaaaatctaagtc--tttttatttacagggactaaaaccggaattcggtaatattacaaggacaaaa 11003746  T
Q  524 agaggtatttac 535  Q
    ||||||||||||    
T  11003745 agaggtatttac 11003734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 370 - 470
Target Start/End: Original strand, 17649222 - 17649322
Alignment:
Q  370 tctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||||||||||||||||||||||||||||||| ||||  |||||  |||||| |||||||  ||||| ||||||||||||| ||||||| ||||||||    
T  17649222 tctgaaattacagggacgtaatttatgcagattctgttgacttgataaaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaaat 17649321  T
Q  470 c 470  Q
    |    
T  17649322 c 17649322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 161 - 301
Target Start/End: Complemental strand, 30500419 - 30500276
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn--ttagattttgtccctgtaatttcatattctt 257  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||  |||           |||||||||||||||||||||||||||| ||    
T  30500419 agggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatattgtt 30500320  T
Q  258 ccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||  || || ||||| |||| ||||||||||    
T  30500319 ccacttttggtccctcctttcatcacgtcagcaaaatctacata 30500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 43572382 - 43572503
Alignment:
Q  155 aaatgtagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt-catgt---nnnnnnnnnttagattttgtccctgtaatttca 250  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| | |||||||| | |||            ||||||||||||||||||||||||    
T  43572382 aaatttagggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttca 43572481  T
Q  251 tattcttccacttttggtccct 272  Q
     |||||||||||||||||||||    
T  43572482 gattcttccacttttggtccct 43572503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 14161940 - 14162014
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  || || ||||| |||||||||| ||||    
T  14161940 ttagattatgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 14162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 52552997 - 52552923
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||| |||||||||||||||||||||||||||||||||  || || ||||| |||||||||| ||||    
T  52552997 ttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 52552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 9267090 - 9266977
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||           |||||||||||||||| ||||||| ||||||||| ||||    
T  9267090 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttt--acagggactaaaaccggaattcgctaatattacagggac 9266993  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  9266992 gaaaagaggtatttac 9266977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 535
Target Start/End: Complemental strand, 19112879 - 19112766
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||| ||||||| | ||||||| |||||||||           |||||||||||||||| ||||||| |||||||||||||||    
T  19112879 agggaccaaaagtggaagaatatgaaattccagggacaaaatctaaatctttttttttt-acagggactaaaaccggaattcgctaatattacatggacg 19112781  T
Q  521 aaaagaggtatttac 535  Q
    |||||||||||||||    
T  19112780 aaaagaggtatttac 19112766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 45058800 - 45058724
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacataca 303  Q
    |||||||||||| ||||||||||| ||||||||| ||||| ||||| ||||||||| |||||| |||||||| ||||    
T  45058800 ttagattttgtctctgtaatttcagattcttccatttttgatcccttattccaccatgtaagccgaatctacctaca 45058724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 161 - 301
Target Start/End: Complemental strand, 14262415 - 14262271
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn---ttagattttgtccctgtaatttcatattct 256  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||||||  |||            |||||||||||||||||||||||||||| |    
T  14262415 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgt 14262316  T
Q  257 tccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||| ||||||  || || ||||| |||||||||| ||||    
T  14262315 tccacttttagtccctcctttcatcacgtcagcagaatctgcata 14262271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 5800674 - 5800748
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||  || || ||||| |||||||||| ||||    
T  5800674 ttagattatgtccctgtaatttcatattcttccatttttggtccctcctttcatcacgtcagcagaatctgcata 5800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 272
Target Start/End: Original strand, 16721990 - 16722105
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgt---nnnnnnnnnttagattttgtccctgtaatttcatattct 256  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||||||| |||            ||||||||||||| |||||||||| |||||    
T  16721990 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattct 16722089  T
Q  257 tccacttttggtccct 272  Q
    ||||||||||||||||    
T  16722090 tccacttttggtccct 16722105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 301
Target Start/End: Complemental strand, 35996054 - 35995913
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt-catgtnnnnnnnnnttagattttgtccctgtaatttcatattcttcc 259  Q
    |||||||||||||||||||||  ||||||||||||||||||||  ||||||| | |||         ||||| |||||| | ||||||||| ||||||||    
T  35996054 agggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaattagaatttgtctcagtaatttcagattcttcc 35995955  T
Q  260 acttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||  || || |||||  ||||||||| ||||    
T  35995954 acttttggtcccttctttcatcacgtccgcagaatctgcata 35995913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 20854005 - 20853960
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  20854005 ttagattttgtccctgtaatttcagattcttccacttttggtccct 20853960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 535
Target Start/End: Original strand, 16722255 - 16722367
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||           |||||||||||||| ||| ||||| ||||||||| |||||    
T  16722255 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgt--acagggactaaaactgaaattcgctaatattacagggacg 16722352  T
Q  521 aaaagaggtatttac 535  Q
    |||||||||||||||    
T  16722353 aaaagaggtatttac 16722367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 35995793 - 35995680
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||||             ||||||||||||||| |||||||| ||||||||| | ||    
T  35995793 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--aaaaaaattctacagggactaaaaccggaattcgctaatattacaggaac 35995696  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  35995695 gaaaagaggtatttac 35995680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 54505233 - 54505288
Alignment:
Q  9 agcaaaggaagggttttaaggatctaagattgacgagaatgaaattttgttctgaa 64  Q
    |||||||||| || |||||||||||||||||||||||||||||| |||||| ||||    
T  54505233 agcaaaggaaagggtttaaggatctaagattgacgagaatgaaaatttgttttgaa 54505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 38283619 - 38283693
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||| ||| |||||||||||| ||||||||||| |||||  || || ||||| |||||||||||||||    
T  38283619 ttagattttgttcctataatttcatattgttccacttttgatccctcctttcatcacgtcagcagaatctacata 38283693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 532
Target Start/End: Original strand, 14162135 - 14162243
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacg 520  Q
    ||||||||||| |||||||||||||||||||  |||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||     
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc---tcttttttacagggactaaaaccggaattcgctaatattacagggaca 14162231  T
Q  521 aaaagaggtatt 532  Q
    ||||||||||||    
T  14162232 aaaagaggtatt 14162243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 14171966 - 14171913
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  14171966 tagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 14171913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 21633159 - 21633208
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  21633159 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 21633208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 33372475 - 33372520
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  33372475 ttagattttgtccctgtaatttcagattattccacttttggtccct 33372520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 45003565 - 45003610
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  45003565 ttagattttgtccctgtaatttcagattcttccactttttgtccct 45003610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 532
Target Start/End: Original strand, 5800869 - 5800977
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaattcgcaaatattacatggacga 521  Q
    ||||||||||| ||||||||| |||||||||  |||||| |||||||||           |||||||||||| | |||||||| ||||||||| ||||||    
T  5800869 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttt--acagggactaaaccggaattcgctaatattacagggacga 5800966  T
Q  522 aaagaggtatt 532  Q
    |||||||||||    
T  5800967 aaagaggtatt 5800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 535
Target Start/End: Original strand, 45970183 - 45970292
Alignment:
Q  426 accaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggacgaaaa 524  Q
    ||||||| ||||||||||||||||||| ||||||| || ||||||           |||||||||||||||||| ||| | ||||||||| |||||||||    
T  45970183 accaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttttt-acagggactaaaaccgaaattcactaatattacagggacgaaaa 45970281  T
Q  525 gaggtatttac 535  Q
    |||||||||||    
T  45970282 gaggtatttac 45970292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 11003801 - 11003844
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtcc 270  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  11003801 ttagattttgtccttgtaatttcagattcttccacttttggtcc 11003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 14171895 - 14171852
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtcc 270  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  14171895 ttagattttgtccctgtaatttctgattcttccacttttggtcc 14171852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 469
Target Start/End: Complemental strand, 14262150 - 14262103
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  14262150 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 14262103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 482 - 532
Target Start/End: Complemental strand, 27946165 - 27946114
Alignment:
Q  482 acagggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatt 532  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  27946165 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatt 27946114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 14161871 - 14161921
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt 212  Q
    |||||||||  |||||||||  |||||||||||||||||||||||||||||    
T  14161871 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagt 14161921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 15328529 - 15328603
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||  || || ||||| | |||||||| ||||    
T  15328529 ttagattttgtccctgtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcata 15328603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 19720389 - 19720335
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||    
T  19720389 acagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttac 19720335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 27946187 - 27946241
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||||| ||||||| ||||||||  ||||||||||||||||||||    
T  27946187 acagggactaaaaccggaattcgctaatattactgggacgaaaagaggtatttac 27946241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 532
Target Start/End: Complemental strand, 30500155 - 30500048
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||| ||||||||| ||||||| ||||||||            |||||||||||||||||| ||||| ||||||||| ||| |    
T  30500155 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat----ttttttttacagggactaaaaccgaaattcgctaatattacagggatg 30500060  T
Q  521 aaaagaggtatt 532  Q
    ||||||||||||    
T  30500059 aaaagaggtatt 30500048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 45969984 - 45970026
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  45969984 ttagattttgtccctgtaatttcagattctttcacttttggtc 45970026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 49986525 - 49986579
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca 214  Q
    |||||||||||| |||||||||  |||||||||||| ||||||| ||||||||||    
T  49986525 tagggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtca 49986579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 49986597 - 49986639
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  49986597 ttagattttgtccctgtaatttcagattcttctacttttggtc 49986639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 52553065 - 52553015
Alignment:
Q  163 ggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||||||||||   |||||||||||||||||| ||||||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtc 52553015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 4204823 - 4204774
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||||||||||||| ||||||  |||||||||    
T  4204823 gagggaccaaaagtggaagaatctgaaattacagggacataatctaaatc 4204774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 4204827 - 4204786
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  4204827 aaatgagggaccaaaagtggaagaatctgaaattacagggac 4204786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 9267284 - 9267239
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||    
T  9267284 ttagattttgtccctgtaatatcagattcttctacttttggtccct 9267239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 19112762 - 19112815
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||   ||||||||||||||||||| |||||||||    
T  19112762 tagggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtc 19112815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 19113074 - 19113029
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||||    
T  19113074 ttagattttatccctgtaatttcagattcttctacttttggtccct 19113029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 20853811 - 20853697
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| ||||||||  ||||||| |||||||||           ||||||  |||||||||| ||||| ||||||||| ||||    
T  20853811 gagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatctttttttttt-acagggtttaaaaccgaaattcgctaatattacagggac 20853713  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  20853712 gaaaagaggtatttac 20853697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 35740884 - 35740929
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||    
T  35740884 ttagattttgtccctgtaattttaaattcttccacttttagtccct 35740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 43572650 - 43572691
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  43572650 aaatgagggaccaaaagtggaagaatctgaaattacagggac 43572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 14162135 - 14162171
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||||||||    
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggac 14162171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 15328724 - 15328772
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| ||||| ||||||||||||| ||||||| |||||||||    
T  15328724 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatc 15328772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 21632966 - 21633010
Alignment:
Q  228 tagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||    
T  21632966 tagatgttgtccctgtaatttcagattctttcacttttggtccct 21633010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 21633156 - 21633196
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  21633156 aatgagggaccaaaagtggaagaatctgaaattacagggac 21633196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 27946244 - 27946192
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  | |||||||||||||||||| |||||||||    
T  27946244 agggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtc 27946192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 35995796 - 35995756
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  35995796 aatgagggaccaaaagtggaagaatctgaaattacagggac 35995756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 35995878 - 35995838
Alignment:
Q  232 ttttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  35995878 ttttgtccctgtaatttcatgttcctccacttttggtccct 35995838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 43572654 - 43572702
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||||||||| ||||||||||||||||||| ||||||  ||||||||    
T  43572654 gagggaccaaaagtggaagaatctgaaattacagggacagaatctaaat 43572702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 45058755 - 45058803
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||| ||||||||||||||||||||||||| | ||||| |||||||||    
T  45058755 agggatcaaaaatggaagaatctgaaattacagagacaaaatctaaatc 45058803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 45969914 - 45969966
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| |||||||||    
T  45969914 agggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtc 45969966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Complemental strand, 52552806 - 52552758
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||| ||||| ||||||||||||||||||| ||||||| |||||||||    
T  52552806 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatc 52552758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 19720333 - 19720384
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||  |||||||||  |||||||||||||||||||| |||||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtc 19720384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 258
Target Start/End: Original strand, 19720402 - 19720433
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttc 258  Q
    ||||||||||||||||||||||||||||||||    
T  19720402 ttagattttgtccctgtaatttcatattcttc 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 33372669 - 33372716
Alignment:
Q  423 gggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||| ||||| ||||||||||||||||||| ||||||| |||||||||    
T  33372669 gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatc 33372716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 354
Target Start/End: Complemental strand, 11003844 - 11003810
Alignment:
Q  320 ggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||| ||||||||||||||||||||    
T  11003844 ggaccaaaagtggaagaatctgaaattacaaggac 11003810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 17649319 - 17649277
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||||||| ||| |||||| |||||||    
T  17649319 ttagattttgtccctgtaatttcagattattccacatttggtc 17649277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 35995997 - 35996051
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||||||||| || ||||||| ||||||||| ||||||||||| ||||||||    
T  35995997 acagggactaaaatcggaattcgctaatattacagggacgaaaagatgtatttac 35996051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 47575581 - 47575507
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||| ||||||||||| ||| ||| |||||||||| ||  || || ||||| |||||||||| ||||    
T  47575581 ttagattttgtctctgtaatttcagatttttcaacttttggtctctcctttcatcacgtcagcagaatctgcata 47575507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 49986850 - 49986904
Alignment:
Q  482 acagggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||| |||||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  49986850 acaggaactaaaaccgaaattcgctaatattactgggacgaaaagaggtatttac 49986904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 1068954 - 1068913
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||| |||||| |||||||||||||| ||||||    
T  1068954 attttgtccctgtcatttcagattcttccacttttagtccct 1068913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 9267354 - 9267301
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||   |||||||||||||||||||  ||||||||    
T  9267354 tagggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtc 9267301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 17465561 - 17465528
Alignment:
Q  239 cctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||||| ||||||||||||||||    
T  17465561 cctgtaatttcatattcctccacttttggtccct 17465528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 17465746 - 17465697
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagtttta 210  Q
    ||||||||||| |||||||||   ||||||||||||||||| ||||||||    
T  17465746 agggtaaatacctcttttcgtccttgtaatattagcgaatttcagtttta 17465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 535
Target Start/End: Original strand, 17465706 - 17465743
Alignment:
Q  498 aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  17465706 aattcgctaatattacaaggacgaaaagaggtatttac 17465743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 21633276 - 21633223
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| | || ||||  |||||||||||||||||| |||||||||||    
T  21633276 tagggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtc 21633223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 32998397 - 32998434
Alignment:
Q  317 gagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  32998397 gagggactaaaagtggaggaatctgaaattacagggac 32998434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 32998443 - 32998398
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||||||||| |||| ||||||||| ||||||    
T  32998443 ttagattctgtccctgtaatttcagattcctccacttttagtccct 32998398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 35741940 - 35741911
Alignment:
Q  184 ctgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||||||||||||||||||||||    
T  35741940 ctgtaatattagcgaattccagttttagtc 35741911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 36990969 - 36990924
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||||||| | |||||||||||||| ||||||    
T  36990969 ttagattctgtccctgtaattttagattcttccacttttagtccct 36990924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 37016409 - 37016364
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||||||| | |||||||||||||| ||||||    
T  37016409 ttagattctgtccctgtaattttagattcttccacttttagtccct 37016364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 351
Target Start/End: Original strand, 49986788 - 49986825
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaag 351  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  49986788 aatgagggaccaaaagtggaagaatatgaaattacaag 49986825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 49986909 - 49986856
Alignment:
Q  159 gtagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt 212  Q
    ||||||||||||| |||||||||  | |||||||||||||||| | ||||||||    
T  49986909 gtagggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagt 49986856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 5800869 - 5800905
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| |||| |||||||||||||||    
T  5800869 agggaccaaaagtggaagaatatgaaattacaaggac 5800905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 9267093 - 9267053
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  9267093 aatgagggaccaaaagtggaagaatatgaaattacagggac 9267053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 14162257 - 14162197
Alignment:
Q  153 ataaatgtagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||| | |||| ||||| |||||| ||  |||||||||||||||||||| |||||||||    
T  14162257 ataaattttgggttaatacctctttttgtccctgtaatattagcgaattccggttttagtc 14162197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 14262150 - 14262114
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  14262150 agggaccaaaagtggaagaatctgaaattacagggac 14262114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 16722173 - 16722209
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  16722173 gtccctgtaatttcagattcctccacttttggtccct 16722209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 20853694 - 20853734
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaatt 201  Q
    ||||||||||| |||||||||  ||||||||||||||||||    
T  20853694 agggtaaatacctcttttcgtccctgtaatattagcgaatt 20853734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 21632900 - 21632940
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaatt 201  Q
    ||||||||||| |||||||||  ||||||||||||||||||    
T  21632900 agggtaaatacctcttttcgtccctgtaatattagcgaatt 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 38283728 - 38283768
Alignment:
Q  232 ttttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  38283728 ttttgtccgtgtaatttcaaattcctccacttttggtccct 38283768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 45003875 - 45003823
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt 212  Q
    ||||||||||| ||| ||||||  |||||||||||||||||| | ||||||||    
T  45003875 tagggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagt 45003823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 45970295 - 45970243
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  |||||||||||| ||||| | |||||||||    
T  45970295 agggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtc 45970243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 47575472 - 47575432
Alignment:
Q  232 ttttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||||||| |||| |||||||||| |||||    
T  47575472 ttttgtccctgtaatttcaaattcctccacttttgatccct 47575432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 49986710 - 49986746
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  49986710 gtccctgtaatttcagattcctccacttttggtccct 49986746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-101; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 10108679 - 10108372
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  10108679 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaa 10108580  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||   ||||| |||||||||    
T  10108579 aagtggaggaatttgaaattacagggaccaaaagtgggacgaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggaggga 10108480  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  10108479 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatc--tttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaag 10108382  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  10108381 aggtatttac 10108372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 227 - 469
Target Start/End: Complemental strand, 26136994 - 26136752
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26136994 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaa 26136895  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||  |||||| ||||||| |    
T  26136894 aaatggaggaatctgaaagtacaaggaccaaaagtgggagaaatctgaaattacagggacgtaatttatgcagattatgctgacttgatgaaaggaggaa 26136795  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
     ||||| |||||||||||||||||||  |||||| ||||||||    
T  26136794 tcaaaattggaagaatctgaaattacaaggacaaaatctaaat 26136752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 14820603 - 14820297
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| | ||||||||||||||||||    
T  14820603 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatgactcgtaaaatgagggaccaa 14820504  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||| ||||||| ||| |||||  ||| ||||| | |||| |||||||||||||||||||||||||||||||||||| | ||   ||||| |||||||||    
T  14820503 aagtagaggaatttgagattacggggagcaaaactaggagaaatctgaaattacagggacgtaatttatgcagattctgctgatgtgatgaaaggaggga 14820404  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||           ||||| ||||||||| |||||||| ||||||||| ||||||||||    
T  14820403 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatc---ttttttttacaggaactaaaaccggaattcgctaatattacagggacgaaaag 14820307  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  14820306 aggtatttac 14820297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 154 - 470
Target Start/End: Original strand, 17622882 - 17623199
Alignment:
Q  154 taaatgtagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnntt-agattttgtccctgtaatttcat 251  Q
    |||||||||||||||||| |||||||||   ||||||||||||||||| |||||||||||  |||         || ||||||||| | |||||||| |     
T  17622882 taaatgtagggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgtaaaaaaagatttagattttgttc-tgtaattttag 17622980  T
Q  252 attcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaag 351  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  17622981 attcttccacttttggtccctcattccaccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 17623080  T
Q  352 gaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatta 451  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||   ||||| |||||| |||||||| ||||||||| ||||||||    
T  17623081 gaccaaaagtgggaggaatttgaaattacagggacataatttatgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaatta 17623180  T
Q  452 cggggacaacatctaaatc 470  Q
    |  |||||| |||||||||    
T  17623181 caaggacaaaatctaaatc 17623199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 14767576 - 14767816
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||| |||| ||| ||||||||||||| ||||||    
T  14767576 ttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaa 14767675  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||| || ||||||    
T  14767676 aagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagaggga 14767775  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |  ||| ||||||||| ||||||||| ||||||| ||||||    
T  14767776 cacaaactggaagaatatgaaattacagggacaaaatctaa 14767816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 21148006 - 21148312
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||| ||| ||||||||||||||||||||    
T  21148006 ttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaa 21148105  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||   ||||| |||||||||    
T  21148106 aagtggaggaatttgaaattata-ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacatgatgaaaggaggga 21148204  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    | |||| ||||||||| |||||||||  |||||| |||||| |            |||||||||||||||| ||||| | |||||||||  |||||||||    
T  21148205 ctaaaagtggaagaatatgaaattacaaggacaaaatctaatt--ttttttttttacagggactaaaaccggaattcactaatattacagagacgaaaag 21148302  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  21148303 aggtatttac 21148312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 5555178 - 5554871
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| ||||| |||| ||||||||||||||||||||||||    
T  5555178 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtcagcaaaatctgcataaatggcacgtaaaatgagggaccaa 5555079  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||| ||||||  ||||||||| ||||||||| | |||||||||||||||| |||||||||||||||||||||||| | ||   ||||| ||| |||||    
T  5555078 aagtgaaggaattcgaaattacagggaccaaaactaggaggaatctgaaattccagggacgtaatttatgcagattctgctgacgtgatgaaagaaggga 5554979  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||  ||||||| |||| ||||           ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  5554978 ccaaaagtggaagaatatgaaattatagggacaaaatctgaatc--tttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaag 5554881  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  5554880 aggtatttac 5554871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 22494693 - 22494454
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  22494693 ttagaatttgtccctgtaatttcaaattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgacacgtaaaatgagggaccaa 22494594  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||| | ||   |||| ||| || |||    
T  22494593 aagtggaggaatctgaaattactgggaccaaaagtaggaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgat-taaagaagga 22494495  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |||||||||||||||| ||||||||| || |||| ||||||    
T  22494494 ccaaaaatggaagaatatgaaattacaggaacaaaatctaa 22494454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 231 - 535
Target Start/End: Complemental strand, 7689828 - 7689526
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt 330  Q
    |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||    
T  7689828 attttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt 7689729  T
Q  331 ggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaa 430  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||| |||||||||  |  |   ||||| || ||||||||||    
T  7689728 ggaggaatctgaaattacagggactaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgccgatgtgatgaaaagagggaccaa 7689629  T
Q  431 aaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggt 529  Q
    || |||||||||||||||||||  |||||| |||||||||           ||| |||||||| ||| ||||||| ||||||||| ||||||||||||||    
T  7689628 aagtggaagaatctgaaattacaaggacaa-atctaaatc--tttttatttacaaggactaaagccgaaattcgctaatattacagggacgaaaagaggt 7689532  T
Q  530 atttac 535  Q
    ||||||    
T  7689531 atttac 7689526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 161 - 467
Target Start/End: Original strand, 21147935 - 21148245
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt-catgt----nnnnnnnnnttagattttgtccctgtaatttcatattc 255  Q
    ||||| ||||| |||||| ||  |||||||||||||||||||| |||||||| | |||             |||||||||||||||||||||||| ||||    
T  21147935 agggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 21148034  T
Q  256 ttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacc 355  Q
    ||||||||||||||||| |||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||| ||||||||  ||||||    
T  21148035 ttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggaggaatttgaaatta-taggacc 21148133  T
Q  356 aaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggg 455  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||   ||||| |||||||||| |||| ||||||||| |||||||||  |    
T  21148134 aaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaattacaag 21148233  T
Q  456 gacaacatctaa 467  Q
    ||||| ||||||    
T  21148234 gacaaaatctaa 21148245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 30789576 - 30789883
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||| ||||||||||| |||| |||||||||| ||||| ||| |||||||| |||| ||||| |||||||||||||||| |||||||| |||    
T  30789576 ttagattttgtctctgtaatttcagattcctccacttttgatccctcatttcaccacgttagcaaaatctgcatacatggcacgtaagatgagggatcaa 30789675  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||  | ||   ||||| || || |||    
T  30789676 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatatgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaacgatgga 30789775  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||  | ||||||||| ||||||||||    
T  30789776 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttatttacagggactaaaaccggaatttactaatattacagggacgaaaag 30789873  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  30789874 aggtatttac 30789883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 42606062 - 42605822
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  42606062 ttagattttgtccccgtaatttcaaattcttccacttttggtccattattccaccacgtaagcagaatttgcattcatggcacgtaaaatgagggaccaa 42605963  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||   ||   ||||  |||||||||    
T  42605962 aagtggaggaatctgaaattacagcgaccaaaagcgggaggaatttgaaattacagggacgtaatttatgcatattctactgacgtgattaaaggaggga 42605863  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |||||| ||||||||| ||||||||| |||| || ||||||    
T  42605862 ccaaaagtggaagaatatgaaattacagggataaaatctaa 42605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 231 - 470
Target Start/End: Complemental strand, 2583625 - 2583386
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt 330  Q
    ||||||||||| |||||||| ||||||||||||||||| ||| |||||||||| | ||| |||||| ||||||||||| |||||||||||||| ||||||    
T  2583625 attttgtccctataatttcagattcttccacttttggttcctcattccaccacatcagccgaatctgcatacatggcatgtaaaatgagggactaaaagt 2583526  T
Q  331 ggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaa 430  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||   ||||| ||||||||| |||    
T  2583525 ggaggaatttgaaattacagggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggatcaa 2583426  T
Q  431 aaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    || | |||||||| |||||||| ||||||| |||||||||    
T  2583425 aagtagaagaatccgaaattacagggacaaaatctaaatc 2583386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 43851665 - 43851950
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn--ttagattttgtccctgtaatttcatattcttc 258  Q
    |||||||||| |||||||||  |||||||||||||||||||| |||||||||  |||           |||||||||||||||||||||||| |||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaagatttagattttgtccctgtaatttcagattcttc 43851764  T
Q  259 cacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaa 358  Q
    |||||||| ||||| |||||||||| | |||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  43851765 cacttttgatccctcattccaccacatcagcagaatctgcatacatgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggaccaaa 43851864  T
Q  359 agtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatct 444  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||  | ||   ||||| |||||||||| |||| |||||||||||    
T  43851865 agtgggaggaatctgaaattacaaggacgtaattgatgcaaattttgctgacgtgatgaaaggagggacaaaaagtggaagaatct 43851950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 227 - 451
Target Start/End: Original strand, 42113053 - 42113277
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| |||||||||||||| | |||||| |||||||||||||| ||| |||||||| |||||||||| |||||||| ||| ||||||||||||||||    
T  42113053 ttagattatgtccctgtaatttaagattctttcacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacataaaatgagggaccaa 42113152  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||| ||| |||||||| | |||||||||||||||||||| ||||||||||||||| ||||||||||||| |  | ||   ||||| |||||||||    
T  42113153 aagtggagtaatatgaaattatagggaccaaaagtgggaggaatatgaaattacagggacataatttatgcagaatttgctgacatgatgaaaggaggga 42113252  T
Q  427 ccaaaaatggaagaatctgaaatta 451  Q
     ||||| ||||||||| ||||||||    
T  42113253 tcaaaagtggaagaatttgaaatta 42113277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 227 - 395
Target Start/End: Original strand, 26532852 - 26533020
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||  ||    
T  26532852 ttagattttgtccctgtaatttcaaatttttccacttttgatccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggattaa 26532951  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttat 395  Q
    ||||||||||||||||||||| | | |||||||||| ||||| | |||||||||| ||| |||||||||    
T  26532952 aagtggaggaatctgaaattataggaaccaaaagtgtgaggagtttgaaattacaaggatgtaatttat 26533020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 252 - 470
Target Start/End: Original strand, 43481408 - 43481626
Alignment:
Q  252 attcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaag 351  Q
    |||||||||||||||||| || ||||||||||| ||| ||||| | |||||||||||||||||| |||||| ||||||||||||||||| |||||||||     
T  43481408 attcttccacttttggtctctcattccaccacgcaagtagaatttgcatacatggcacgtaaaacgagggatcaaaagtggaggaatctaaaattacaaa 43481507  T
Q  352 gaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatta 451  Q
    |||||| ||  ||||||||||||||||||| ||||||||||||||||||||  | ||   ||||  |||||  |||||| | ||||||||| ||||||||    
T  43481508 gaccaagagcaggaggaatctgaaattacaaggacgtaatttatgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaatta 43481607  T
Q  452 cggggacaacatctaaatc 470  Q
    | ||||||| || ||||||    
T  43481608 cagggacaaaatttaaatc 43481626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 301
Target Start/End: Original strand, 10108369 - 10108513
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn---ttagattttgtccctgtaatttcatattct 256  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||||||  |||            ||||||||||||||||||||||||||||||    
T  10108369 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 10108468  T
Q  257 tccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||||  || || ||||| |||||||||| ||||    
T  10108469 tccacttttggtccctcctttcatcacgtcagcagaatctgcata 10108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 162 - 301
Target Start/End: Original strand, 14820295 - 14820437
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt-catgtnnnnnnnnn--ttagattttgtccctgtaatttcatattcttc 258  Q
    |||||||||| |||||||||  |||||||||||||||||||| |||||||| | |||           ||||||||||||||||||||||||||||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 14820394  T
Q  259 cacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||  || || ||| | |||||||||| ||||    
T  14820395 cacttttggtccctcctttcatcacatcagcagaatctgcata 14820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 43851779 - 43851667
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||| ||||| ||||||||||||||||||| ||||||| |||||||||           |||||||||||||||| ||||||| ||||||||| ||||    
T  43851779 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttgttt---acagggactaaaaccggaattcgctaatattacagggac 43851683  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  43851682 gaaaagaggtatttac 43851667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 5554940 - 5555012
Alignment:
Q  229 agattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  || || ||||| |||||||||| ||||    
T  5554940 agattttgtccctataatttcatattcttccacttttggtcccttctttcatcacgtcagcagaatctgcata 5555012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 10171452 - 10171383
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatct 296  Q
    |||||||||||||||||||||| | |||||| |||||||||||||| |||||| || || ||||||||||    
T  10171452 ttagattttgtccctgtaattttagattctttcacttttggtccctcattccatcatgtcagcagaatct 10171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 532
Target Start/End: Complemental strand, 21148051 - 21147941
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||     
T  21148051 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-ttttttttttacagggactaaaaccggaattcgctaatattacagggaca 21147953  T
Q  521 aaaagaggtatt 532  Q
    ||||||||||||    
T  21147952 aaaagaggtatt 21147941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 42605822 - 42605867
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccct 42605867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 26136684 - 26136736
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  26136684 agggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtc 26136736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 469
Target Start/End: Original strand, 21144713 - 21144816
Alignment:
Q  366 ggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatct 465  Q
    ||||||| |||||||||||||||||||||||||||||| | ||   || |  ||  |||||| ||||||||| ||||||||||||||  |||||| ||||    
T  21144713 ggaatctcaaattacagggacgtaatttatgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaattacaaggacaaaatct 21144812  T
Q  466 aaat 469  Q
    ||||    
T  21144813 aaat 21144816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 30789816 - 30789773
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtcc 270  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  30789816 ttagattttgtccctgtaatttcagattcttccacttttggtcc 30789773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 17623196 - 17623122
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||  || || ||||| |||||||||| ||||    
T  17623196 ttagattttgtccttgtaatttcaaattcttccacttttggtcactcctttcatcacgtcagcagaatctgcata 17623122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 21148245 - 21148171
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||  || || || || |||||||||| ||||    
T  21148245 ttagattttgtccttgtaatttcatattcttccacttttagtccctcctttcatcatgtcagcagaatctgcata 21148171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 239 - 380
Target Start/End: Original strand, 22848399 - 22848540
Alignment:
Q  239 cctgtaatttcatattcttccacttttggtccctgattccacc-acgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaa 337  Q
    |||||||||||| |||||| || |||||||||||  || |||| |||| |  ||||||| |||| ||||||||| |||||||| |  |||| ||||||||    
T  22848399 cctgtaatttcagattctttcatttttggtccctcgtttcacccacgtcaaaagaatctgcataaatggcacgtgaaatgagg-ataaaaaatggaggaa 22848497  T
Q  338 tctgaaattacaaggaccaaaagtgggaggaatctgaaattac 380  Q
    | ||||||||||  |||||||||||  | |||| |||||||||    
T  22848498 tttgaaattacagagaccaaaagtgaaaagaatatgaaattac 22848540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 5554867 - 5554920
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  5554867 tagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 5554920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 532
Target Start/End: Original strand, 10108634 - 10108743
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||           ||||||||||||||| ||||| || ||||||||| |||||    
T  10108634 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc--tttttttttacagggactaaaaccggaatttgctaatattacagggacg 10108731  T
Q  521 aaaagaggtatt 532  Q
    ||||||||||||    
T  10108732 aaaagaggtatt 10108743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 532
Target Start/End: Original strand, 14820558 - 14820667
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||     
T  14820558 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc--tttttttttacagggactaaaaccggaattcgctaatattacagggact 14820655  T
Q  521 aaaagaggtatt 532  Q
    ||||||||||||    
T  14820656 aaaagaggtatt 14820667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 42113360 - 42113248
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttag-tcatgtnnnnnnnnnttagattttgtccctgtaatttcatattcttcc 259  Q
    |||||||||||||||||||||  ||||||||||| |||||| | ||||||| || |||         ||||||| ||||||| |||||||| ||||||||    
T  42113360 agggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgtaaaaaaaaattagattatgtccctttaatttcaaattcttcc 42113261  T
Q  260 acttttggtccct 272  Q
    ||||||| |||||    
T  42113260 acttttgatccct 42113248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 43481694 - 43481642
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||  ||||||||| ||||||||||||||||||||| |||||||||    
T  43481694 agggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtc 43481642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 535
Target Start/End: Original strand, 10171397 - 10171519
Alignment:
Q  412 tgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatat 510  Q
    ||||| || |||||||||||| || |||||||| ||||||| ||||||| ||||||||            ||||||||||||||| |||||||| |||||    
T  10171397 tgatggaatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaat--agttttttttacagggactaaaaccggaattcgctaatat 10171494  T
Q  511 tacatggacgaaaagaggtatttac 535  Q
    |||| |||||||||| |||||||||    
T  10171495 tacagggacgaaaagcggtatttac 10171519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 18044205 - 18044154
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 18044154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 22494454 - 22494497
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtcc 270  Q
    ||||||||||| |||||||||||||||||||||| |||||||||    
T  22494454 ttagattttgttcctgtaatttcatattcttccatttttggtcc 22494497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 2583389 - 2583463
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||||||||||  ||||||| ||||||| |||||  || || ||||| |||||||||| ||||    
T  2583389 ttagattttgtccctgtaatttcggattcttctacttttgatccctcctttcatcacgtcagcagaatctgcata 2583463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 529
Target Start/End: Original strand, 5555133 - 5555239
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||           |||| ||||||||||| ||||||| ||||||||| |||||    
T  5555133 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc--tttttttttacagagactaaaaccgaaattcgctaatattacagggacg 5555230  T
Q  521 aaaagaggt 529  Q
    |||||||||    
T  5555231 aaaagaggt 5555239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 14767816 - 14767742
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||  || || ||||| | |||||||| ||||    
T  14767816 ttagattttgtccctgtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcata 14767742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 17622946 - 17622892
Alignment:
Q  482 acagggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||    
T  17622946 acagggactaaaactgaaattcgctaatattacaaggacgaaaagaggtatttac 17622892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 18044153 - 18044203
Alignment:
Q  486 ggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  18044153 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttac 18044203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 21144814 - 21144740
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||| |||||||||| |||| |||| |||| |||||| |||  ||||||| |||||||||| ||||    
T  21144814 ttagattttgtccttgtaatttcagattcctccatttttcgtcccttatttaaccacgtcagcagaatctgcata 21144740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 467
Target Start/End: Original strand, 26136948 - 26136994
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  26136948 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 42606019 - 42606065
Alignment:
Q  424 ggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  42606019 ggaccaaaagtggaagaatttgaaattacggggacaaaatctaaatc 42606065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 7689786 - 7689899
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||| ||||| ||||||||||||||||||| ||||||| || ||||||           ||| ||||||||| || ||||||| ||||||||| ||||    
T  7689786 gagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatcttttttttt--acacggactaaaatcggaattcgctaatattacagggac 7689883  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  7689884 gaaaagaggtatttac 7689899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 10171523 - 10171470
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||||  ||||||||  |||||||||||||||||||| |||||||||    
T  10171523 tagggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtc 10171470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 7689902 - 7689850
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  ||||||||||||||||||||  ||||||||    
T  7689902 agggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtc 7689850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Complemental strand, 14767621 - 14767573
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| ||||| ||||||||||||| ||||||| |||||||||    
T  14767621 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatc 14767573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 21148315 - 21148263
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| |||||||||    
T  21148315 agggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtc 21148263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 26136945 - 26136985
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  26136945 aatgagggaccaaaagtggaagaatctgaaattacagggac 26136985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 30789626 - 30789590
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    |||||||||| ||||||||||||||||||||||||||    
T  30789626 aaatgagggatcaaaagtggaggaatctgaaattaca 30789590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 7689598 - 7689637
Alignment:
Q  233 tttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  7689598 tttgtccttgtaatttcagattcttccacttttggtccct 7689637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 43481619 - 43481581
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  43481619 attttgtccctgtaatttcaaattcttccactcttggtc 43481581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 7689522 - 7689563
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaatt 201  Q
    |||||||||||| |||||||||  ||||||||||||||||||    
T  7689522 tagggtaaatacctcttttcgtccctgtaatattagcgaatt 7689563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 21144764 - 21144805
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  21144764 aaataagggacgaaaaatggaggaatctgaaattacaaggac 21144805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 22494647 - 22494696
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||| ||||||||| |||||||  ||||||||    
T  22494647 gagggaccaaaagtggaagaatttgaaattacagggacaaattctaaatc 22494696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 28977688 - 28977733
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| ||||||| | |||||||||| |||||||||||||||||    
T  28977688 ttagattctgtccctatcatttcatatttttccacttttggtccct 28977733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 38726756 - 38726793
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttt 264  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  38726756 ttagattttgtccttgtaatttcagattcttccacttt 38726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 7689783 - 7689823
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  7689783 aatgagggatcaaaagtggaagaatctgaaattacagggac 7689823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 10108552 - 10108588
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  10108552 gtccctgtaatttcaaattcctccacttttggtccct 10108588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 10108749 - 10108697
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||| ||||| |||||||||  ||||||||||||| |||||| |||||||||    
T  10108749 agggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtc 10108697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 14820673 - 14820621
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||| ||||| |||||| ||  |||||||||||||||||||| |||||||||    
T  14820673 agggttaatacctcttttagtccctgtaatattagcgaattccggttttagtc 14820621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 17623083 - 17623047
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  17623083 gtccctgtaatttcagattcctccacttttggtccct 17623047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 21148051 - 21148015
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  21148051 agggaccaaaagtggaagaatctgaaattacagggac 21148015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 22494644 - 22494684
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  22494644 aatgagggaccaaaagtggaagaatttgaaattacagggac 22494684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 26137063 - 26137011
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||  ||||||||  |||||||||||| ||||| |||||||||||    
T  26137063 agggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtc 26137011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 30789886 - 30789834
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  ||||||||||||  |||||| |||||||||    
T  30789886 agggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtc 30789834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 40487769 - 40487741
Alignment:
Q  185 tgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||||||||||||||||||||    
T  40487769 tgtaatattagcgaattccagttttagtc 40487741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 529
Target Start/End: Complemental strand, 42113041 - 42112993
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggt 529  Q
    ||||||||||||| || ||||||| ||||||||| ||||||||||||||    
T  42113041 acagggactaaaatcggaattcgctaatattacagggacgaaaagaggt 42112993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 43851782 - 43851742
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  43851782 aatgagggatcaaaagtggaagaatctgaaattacagggac 43851742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 43851860 - 43851824
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||| |||||||||| |||||    
T  43851860 gtccctgtaatttcatattcctccacttttgatccct 43851824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 184; Significance: 3e-99; HSPs: 7)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 4872 - 4564
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4872 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaa 4773  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||  |||||  |||||||||    
T  4772 aagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacacggacgtaatttatgcagattctgttgacttgataaaaggaggga 4673  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaa-ccgaattcgcaaatattacatggacgaaaag 525  Q
    |||||| | ||||||||| ||||||| ||||||| || ||||||           ||||||||||||| | |||||||| ||||||||| ||||||||||    
T  4672 ccaaaagtagaagaatctcaaattacagggacaaaatttaaatc-ttttttttttacagggactaaaatcggaattcgctaatattacaaggacgaaaag 4574  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  4573 aggtatttac 4564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 4826 - 4938
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| |||||||||  |||||| |||||||||           ||||||| |||||||| |||| || ||||||||| ||||    
T  4826 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttattttt---acagggattaaaaccggaatttgctaatattacagggac 4922  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  4923 gaaaagaggtatttac 4938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 4823 - 4863
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  4823 aatgagggaccaaaagtggaagaatatgaaattacaaggac 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 4942 - 4892
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagtttta 210  Q
    |||||||||||| |||||||||  ||||||||||||| |||||| ||||||    
T  4942 tagggtaaatacctcttttcgtccctgtaatattagcaaattccggtttta 4892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 4636 - 4677
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||| | ||||||| |||||||||||||    
T  4636 attttgtccctgtaatttgagattcttctacttttggtccct 4677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 4561 - 4613
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||   |||||||||||||||||||  ||||||||    
T  4561 agggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtc 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 4745 - 4781
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccct 4781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 6e-97; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 9516679 - 9516986
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  9516679 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgatacgtaaaatgagggaccaa 9516778  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||  |||||| |||||||||    
T  9516779 aagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgtagattttgttgacttgatgaaaggaggga 9516878  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| | ||||||||||||||||| ||||||| |||||||||           |||| ||||||||||| ||||||| ||||||||| ||||||||||    
T  9516879 ccaaaagtagaagaatctgaaattacagggacaaaatctaaatc--tttttttttacagagactaaaaccgaaattcgctaatattacagggacgaaaag 9516976  T
Q  526 aggtatttac 535  Q
    || |||||||    
T  9516977 agatatttac 9516986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 227 - 536
Target Start/End: Complemental strand, 9619288 - 9618981
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||  |||| |||||||||||| |||||| |||    
T  9619288 ttagattttgtccttgtaatttcatattcttccacttttggtccttcattccaccacgtaagcagaatctgtatacctggcacgtaaaaagagggagcaa 9619189  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| |||||||||||||| ||||  |||||| |||||||||    
T  9619188 aagtggaggaatctgaaattacagggaccaaaaatgggaggaatatgaaattacagggacgt-atttatgcagattctgttgacttgatgaaaggaggga 9619090  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| |||||||||||||||||||     
T  9619089 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttgtttttacagggactaaaaccggaattcgctaatattacatggacgaaaat 9618992  T
Q  526 aggtatttact 536  Q
    |||||||||||    
T  9618991 aggtatttact 9618981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 227 - 534
Target Start/End: Original strand, 38574037 - 38574343
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  38574037 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggaccaa 38574136  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||| |||||||||  ||||   ||||| |||||||||    
T  38574137 aagtggaggaatatgaaattacagagaccaaaagtgggaggaatctgaaattacagggacgcaattgatgcagattttgttgacgtgatgaaaggaggga 38574236  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| |||||||||     
T  38574237 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatc--tttttatttacagggactaaaaccagaattcgctaatattacagggacgaaaaa 38574334  T
Q  526 aggtattta 534  Q
    |||||||||    
T  38574335 aggtattta 38574343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 228 - 535
Target Start/End: Original strand, 46046494 - 46046799
Alignment:
Q  228 tagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaa 327  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| || ||||||| ||||||||||||||||||||||||| ||||    
T  46046494 tagattttgtccctgtaatttcatattcttccacttttgatccctcattccaccacgttagtagaatctgcatacatggcacgtaaaatgagggatcaaa 46046593  T
Q  328 agtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggac 427  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||  | ||   ||||| |||||||||     
T  46046594 agtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggat 46046693  T
Q  428 caaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaaga 526  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||| |    
T  46046694 caaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttatttacagggactaaaaccggaattcgctaatattacagggacgaaaa-a 46046790  T
Q  527 ggtatttac 535  Q
    |||||||||    
T  46046791 ggtatttac 46046799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 31090130 - 31090437
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| ||||||||||| |||||||    
T  31090130 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaa 31090229  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||||||||||| |||||||||||||| ||||||  |||  |||||| |||||||||    
T  31090230 aagtggaggaatctgaaattacggggaccaaaagtgggagaaatctgaaattacaaggacgtaatttatgtagattctattgacttgatgaaaggaggga 31090329  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggacgaaaag 525  Q
    |||||| | ||||||||||||||||| ||||||| |||||| |            ||||||||||||| |||| ||||| ||||||||| ||||||||||    
T  31090330 ccaaaagtagaagaatctgaaattacagggacaaaatctaatt--ttttttttttacagggactaaaatcgaaattcgctaatattacagggacgaaaag 31090427  T
Q  526 aggtatttac 535  Q
    || |||||||    
T  31090428 agatatttac 31090437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 37012776 - 37013082
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  37012776 ttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaa 37012875  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||  | ||   ||||| |||||| ||    
T  37012876 aagtggaggaatttgaaattacaaggaccaaaagtaggaagaatatgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagtga 37012975  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||| |||||| |            ||||||||||||||| |||||||| ||||||||| |||||||| |    
T  37012976 ccaaaagtggaagaatatgaaattacagggacaaaatctaatt---tttttttatacagggactaaaaccagaattcgctaatattacagggacgaaatg 37013072  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  37013073 aggtatttac 37013082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 227 - 470
Target Start/End: Original strand, 34064051 - 34064294
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| | ||| |||||||||||||||||| |||||||||||||| ||    
T  34064051 ttagattttgtctctgtaatttcagattcttccacttttggtccctcattccaccacatcagccgaatctacatacatggcatgtaaaatgagggactaa 34064150  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | ||   ||||| ||| |||||    
T  34064151 aagtggaggaatctgaaattacagggaccaaaagtaggaggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaagaaggga 34064250  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||||||||||||||||| | ||||| |||||||||    
T  34064251 ccaaaagtggaagaatctgaaattacagagacaaaatctaaatc 34064294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 228 - 470
Target Start/End: Complemental strand, 7819322 - 7819080
Alignment:
Q  228 tagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaa 327  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaa 7819223  T
Q  328 agtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggac 427  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||    |    ||||| ||||||| ||    
T  7819222 agtggaggaatatgaaattacatggaccaaaagtgggaggaatctgaaattacatggacgtaattgatgcagattttactaacgtgatgaaaggaggaac 7819123  T
Q  428 caaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||    
T  7819122 caaaagtggaagaatctgaaattacagggacaaaatctaaatc 7819080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 160 - 534
Target Start/End: Complemental strand, 9397078 - 9396702
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt-catgt--nnnnnnnnnttagattttgtccctgtaatttcatattct 256  Q
    |||||||||||| |||||||||  ||||||||||||| |||||| |||||||| | |||           |||||||||||||||||||||||| |||||    
T  9397078 tagggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattct 9396979  T
Q  257 tccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacca 356  Q
    ||||||||||| || | |||||| ||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| ||    
T  9396978 tccacttttggaccatcattccaacacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggatca 9396879  T
Q  357 aaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacgggg 456  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||   ||||| ||||||||||||||| ||||| ||| ||||||||  |||    
T  9396878 aaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaattataggg 9396779  T
Q  457 acaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtattta 534  Q
    |||| |||||||||           |||| |||||||| || ||||||| ||||||||| |||||||||||||||||||    
T  9396778 acaaaatctaaatc--ttttttttaacagagactaaaatcgaaattcgctaatattacagggacgaaaagaggtattta 9396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 227 - 529
Target Start/End: Complemental strand, 15641024 - 15640724
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||| ||| |||||||| |||||||| | |||||||| |||||||||||| |||||||    
T  15641024 ttagattatgtccctgtaatttcagattcttccacttttggttcctcatttcaccacgtcagcagaatatgcatacatgacacgtaaaatgatggaccaa 15640925  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| | ||   ||||| |||||||||    
T  15640924 aagtggaggaatctgaaattacaaggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 15640825  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| || |||||| ||||||||| ||||||| |||||||||           ||||| ||||||||| |||||||| ||||||||| ||||||||||    
T  15640824 ccaaaagtgaaagaatatgaaattacagggacaaaatctaaatc---ttttttttacaggaactaaaaccggaattcgctaatattacagggacgaaaag 15640728  T
Q  526 aggt 529  Q
    ||||    
T  15640727 aggt 15640724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 31944259 - 31944016
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| | |||||||| ||||| |||||||||||||||||||||||    
T  31944259 ttagattttgtccatgtaatttcatattcttccactttttgtccctcattccaccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaa 31944160  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| |||||| ||  ||||   ||||| |||||| ||    
T  31944159 aagtggaggaatctgaaattacatggaccaaaagtgggaggaatctgaaattacatggacataattgatgcaggttttgttgacgtgatgaaaggagaga 31944060  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||    
T  31944059 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 31944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 233 - 534
Target Start/End: Complemental strand, 3018315 - 3018014
Alignment:
Q  233 tttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtgg 332  Q
    ||||||| |||||||||| ||||| ||||||||||||||| |||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||    
T  3018315 tttgtccgtgtaatttcagattctaccacttttggtcccttattccaccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaagtgg 3018216  T
Q  333 aggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaa 432  Q
    |||||| |||||||| | |||||||||||||||||||| |||||||||| || |||||||||||||||||| | ||   ||||| |||||||||||||||    
T  3018215 aggaatttgaaattatagggaccaaaagtgggaggaatgtgaaattacaaggccgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaa 3018116  T
Q  433 atggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtat 531  Q
     ||||||||| ||||||||| ||||||| |||||||||           || |||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  3018115 gtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttttaccgggactaaaaccggaattcgctaatattacagggacgaaaagaggtat 3018017  T
Q  532 tta 534  Q
    |||    
T  3018016 tta 3018014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 18713269 - 18713026
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||| |||||||||||||||||| | ||||||| |||||||||||    
T  18713269 ttagattttgtctctgtaatttcagattcttccagttttggtcccttattccaccacgtcagcagaatctacatacattgaacgtaaactgagggaccaa 18713170  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||| ||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||  | ||   ||||| |||||||||    
T  18713169 aagttgaggaatttgaaattacatggaccaaaagagggaggaatctgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggaggga 18713070  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||| ||| ||||||||| ||||||| |||||||||    
T  18713069 ccaaaattggaacaatatgaaattacagggacaaaatctaaatc 18713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 227 - 470
Target Start/End: Original strand, 48579935 - 48580178
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||| ||||||||||| |||||| || ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  48579935 ttagattttgtctctgtaatttcagattctttcaattttggtcccttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggagcaa 48580034  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||| |  ||||||||||||||||||| |||||||||| |||||||||||||||| |||| | |  | ||||| |||||||||    
T  48580035 aagtggaggaatttgaaattagagagaccaaaagtgggaggaatttgaaattacaaggacgtaatttatgcatattctgctaaggtgatgaaaggaggga 48580134  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||| ||| ||||||||| ||||||| |||||||||    
T  48580135 ccaaaagtggaacaatatgaaattacagggacaaaatctaaatc 48580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 230 - 452
Target Start/End: Complemental strand, 4356187 - 4355965
Alignment:
Q  230 gattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaag 329  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  4356187 gattttgtctctgtaatttcaaattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaag 4356088  T
Q  330 tggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggacca 429  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | |    ||||| || |||||||||    
T  4356087 tggaggaatttgaaattacaaggaccaaaagtaggaggaatctgaaattacaaggacgtaatttatgcagattctgctaacgtgatgaaatgagggacca 4355988  T
Q  430 aaaatggaagaatctgaaattac 452  Q
    ||| || |||||| |||||||||    
T  4355987 aaagtgaaagaatatgaaattac 4355965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 229 - 450
Target Start/End: Complemental strand, 18667596 - 18667375
Alignment:
Q  229 agattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaa 328  Q
    |||||||| ||||||||||||| ||||||||| |||| |||||| |||||||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  18667596 agattttgaccctgtaatttcagattcttccagtttttgtcccttattccaccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaa 18667497  T
Q  329 gtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggacc 428  Q
    |||||||||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||   ||||| |||||||||||    
T  18667496 gtggaggaatttaaaattacagggaccaaaagttggaggaatctgaaattacagggacgtaatttatgcagattttgttgacgtgatgaaaggagggacc 18667397  T
Q  429 aaaaatggaagaatctgaaatt 450  Q
    |||| ||||| ||| |||||||    
T  18667396 aaaagtggaacaatatgaaatt 18667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 227 - 466
Target Start/End: Complemental strand, 3273929 - 3273692
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||| ||| |||||||| || ||||||| ||||||||||||||||||||| |||||||    
T  3273929 ttagattttatccctgtaatttcagattcttccacttttgatccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggaccaa 3273831  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    | |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||   ||  |||||| |||||||||    
T  3273830 acgtggagtaatctgaaattac-aggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattctaatgacttgatgaaaggaggga 3273732  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatcta 466  Q
    |||||| ||||||||| ||||||||| ||||||| |||||    
T  3273731 ccaaaagtggaagaatatgaaattacagggacaaaatcta 3273692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 227 - 470
Target Start/End: Original strand, 13132010 - 13132253
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| ||| | |||||||||| ||||||||||||||| ||||| ||| |||||||| |||||||||| |||||||| ||||||||||||||| | ||    
T  13132010 ttagattatgttcatgtaatttcagattcttccacttttgatccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgaggggctaa 13132109  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||| |||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||||||||| | ||  |||||| ||| |||||    
T  13132110 aagtggagtaatctgaaattacatggaccaaaagtgggagaaatatgaaattacaaggacgtaatttatgcagattctgctgatttgatgaaagaaggga 13132209  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||||||| ||||||||| ||||||  |||||||||    
T  13132210 ccaaaagtggaagaatatgaaattacagggacagaatctaaatc 13132253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 227 - 386
Target Start/End: Complemental strand, 48260060 - 48259901
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||| || || |||||| ||||| |||| ||||| ||||||||||||||||||||||||| |||    
T  48260060 ttagattttgtccctgtaatttcaaattcttccacttttgatcgctcattccatcacgtcagcataatctgcatacatggcacgtaaaatgagggatcaa 48259961  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggac 386  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||    
T  48259960 aagtggaggaatctgaaataacagggaccaaaagtaggaggaatctgaaattacatggac 48259901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 162 - 354
Target Start/End: Complemental strand, 26252615 - 26252418
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttag-tcatgt---nnnnnnnnnttagattttgtccctgtaatttcatattctt 257  Q
    |||||||||  |||||||||  |||||||||||||||||||||||||||| || |||            |||||||||||||||||||||||||||||||    
T  26252615 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 26252516  T
Q  258 ccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  26252515 ccacttttggtcccccattccactacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 26252418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 351 - 467
Target Start/End: Complemental strand, 26252453 - 26252337
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||||||||| |||||||||||||||||    
T  26252453 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaatt 26252354  T
Q  451 acggggacaacatctaa 467  Q
    || ||||||| ||||||    
T  26252353 acagggacaaaatctaa 26252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 231 - 341
Target Start/End: Complemental strand, 35376433 - 35376322
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt 330  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||||||||| |||| |||||  ||||||| ||||||||||||||||||||||||    
T  35376433 attttgtccctgtaatttcagaatcttccacttttggtccctcattccaccacgtcagcaaaatctgtatacatgacacgtaaaatgagggaccaaaagt 35376334  T
Q  331 -ggaggaatctg 341  Q
     |||||||||||    
T  35376333 gggaggaatctg 35376322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 535
Target Start/End: Complemental strand, 35376344 - 35376165
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    |||||||||||||||||||||||   ||||| |||| |||||||||| ||||| | ||   ||||| |||||| |||||||| ||||||||||| |||||    
T  35376344 ggaccaaaagtgggaggaatctg---ttacatggacttaatttatgcggattctgctgacgtgatgaaaggagagaccaaaagtggaagaatctaaaatt 35376248  T
Q  451 acggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    || | ||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||    
T  35376247 acagagacaaaatctaaatc---ttttttttacagggactaaaaccagaattcgctaatattacagggacgaaaataggtatttac 35376165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 467
Target Start/End: Original strand, 41947066 - 41947165
Alignment:
Q  368 aatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |||||||||||||||||||||||||||||||||||| ||||  || ||| ||| ||||||||||| ||||| ||| |||||||||  |||||| ||||||    
T  41947066 aatctgaaattacagggacgtaatttatgcagattctgttgactttatgaaagcagggaccaaaagtggaaaaatatgaaattacaaggacaaaatctaa 41947165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 3018081 - 3018155
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || || ||||| |||||||||| ||||    
T  3018081 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 3018155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 38574277 - 38574232
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38574277 ttagattttgtccctgtaatttcatattcttccacttttggtccct 38574232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 3273692 - 3273736
Alignment:
Q  228 tagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3273692 tagattttgtccctgtaatttcatattcttccacttttggtccct 3273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 4355950 - 4356024
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||| ||| || ||||| |||||||||| ||||    
T  4355950 ttagattttgtctatgtaatttcatattctttcacttttggtccctcatttcatcacgttagcagaatctgcata 4356024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 31944019 - 31944061
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31944019 ttagattttgtccctgtaatttcatattcttccacttttggtc 31944061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 34064291 - 34064217
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||  || || ||||| |||||||||| ||||    
T  34064291 ttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcata 34064217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 37013016 - 37012974
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37013016 ttagattttgtccctgtaatttcatattcttccacttttggtc 37012974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 9619049 - 9619094
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  9619049 ttagattttgtccctgtaatttcagattcttccacttttggtccct 9619094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 13132250 - 13132205
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13132250 ttagattctgtccctgtaatttcatattcttccacttttggtccct 13132205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 15640784 - 15640829
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  15640784 ttagattttgtccctgtaatttcatattctttcacttttggtccct 15640829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 26252337 - 26252382
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccct 26252382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 48580175 - 48580130
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  48580175 ttagattttgtccctgtaatttcatattgttccacttttggtccct 48580130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 12904815 - 12904874
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgta 286  Q
    ||||||||||||| | |||||||| |||||||||||||||||| || |||||||||||||    
T  12904815 ttagattttgtccttataatttcagattcttccacttttggtctctcattccaccacgta 12904874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 9396768 - 9396842
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||  || || ||||| |||||||||| ||||    
T  9396768 ttagattttgtccctataatttcaaatttttccacttttggtccctcctttcatcacgtcagcagaatctgcata 9396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 18713029 - 18713103
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||  || || ||||| |||| ||||| ||||    
T  18713029 ttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcata 18713103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 31218303 - 31218357
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  31218303 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttac 31218357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 41947165 - 41947119
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctg 273  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  41947165 ttagattttgtccttgtaatttcatatttttccacttttggtccctg 41947119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 7819083 - 7819124
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggt 268  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  7819083 ttagattttgtccctgtaatttcagattcttccacttttggt 7819124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 9516919 - 9516874
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  9516919 ttagattttgtccctgtaatttcagattcttctacttttggtccct 9516874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 31090370 - 31090325
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  31090370 ttagattttgtccctgtaatttcagattcttctacttttggtccct 31090325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 31218361 - 31218308
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  31218361 tagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 31218308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 34064097 - 34063984
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaac-cgaattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||||||||||||| | ||||| |||||||||           ||||||||||||||  |||||||  ||||||||| ||||    
T  34064097 gagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatc--tttttttttacagggactaaaactagaattcgttaatattacagggac 34064000  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  34063999 gaaaagaggtatttac 34063984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 38574083 - 38573971
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaa-ccgaattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||           ||||||| ||||| | |||||| | ||||||||||||||    
T  38574083 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc---ttttttttacagggattaaaatcggaattcactaatattacatggac 38573987  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  38573986 gaaaagaggtatttac 38573971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 46046733 - 46046688
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||    
T  46046733 ttagattttgtccctgtaatttcagattcttccacttttgatccct 46046688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 470
Target Start/End: Complemental strand, 37012821 - 37012773
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  37012821 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 37012773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 535
Target Start/End: Original strand, 9396968 - 9397074
Alignment:
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||||| ||||| || ||||||||| ||||||||||    
T  9396968 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc---ttttttttacagggactaaaaccggaatttgctaatattacagggacgaaaag 9397064  T
Q  526 aggtatttac 535  Q
    | ||||||||    
T  9397065 aagtatttac 9397074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 9619301 - 9619355
Alignment:
Q  482 acagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||||||||||| |||||||| ||||||||| |||| |||||||||||||||    
T  9619301 acagggactaaaaccagaattcgctaatattacagggacaaaaagaggtatttac 9619355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 9516725 - 9516612
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| |||||||||  |||||| |||||||||           ||| |||||||||||| ||||||| ||||||||| ||||    
T  9516725 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttt--acaaggactaaaaccggaattcgctaatattacagggac 9516628  T
Q  520 gaaaagaggtatttac 535  Q
    |||||||| |||||||    
T  9516627 gaaaagagatatttac 9516612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 18667669 - 18667620
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagtttta 210  Q
    ||||| ||||| |||||||||  |||||||||||||||||||||||||||    
T  18667669 agggttaatacctcttttcgtccctgtaatattagcgaattccagtttta 18667620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 31090176 - 31090127
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  31090176 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 31090127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 535
Target Start/End: Complemental strand, 41947020 - 41946967
Alignment:
Q  483 cagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  41947020 cagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttac 41946967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 3018014 - 3018062
Alignment:
Q  165 taaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 3018062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 9516728 - 9516688
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  9516728 aatgagggaccaaaagtggaagaatatgaaattacaaggac 9516688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 12904963 - 12904923
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaatt 201  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  12904963 agggtaaatacatcttttcgtttatgtaatattagcgaatt 12904923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 18713224 - 18713272
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| ||||||||||||||||||| | ||||| |||||||||    
T  18713224 agggaccaaaactggaagaatctgaaattacagagacaaaatctaaatc 18713272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 31943948 - 31943999
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt 212  Q
    |||||||||||| |||||||||  |||||||||||||||||||| ||||||||    
T  31943948 tagggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagt 31943999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 35376231 - 35376299
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatc 295  Q
    |||||||||||| ||||||||| | |||||||||||||||||| ||  || || ||||| |||||||||    
T  35376231 ttagattttgtctctgtaattttagattcttccacttttggtctctcctttcatcacgtcagcagaatc 35376299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 41946964 - 41947016
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| |||||||||    
T  41946964 agggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtc 41947016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 272
Target Start/End: Original strand, 9396882 - 9396917
Alignment:
Q  237 tccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9396882 tccctgtaatttcatattcctccacttttggtccct 9396917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 349
Target Start/End: Complemental strand, 34064100 - 34064065
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    |||||||||||||||||||| |||||||||||||||    
T  34064100 aatgagggaccaaaagtggaagaatctgaaattaca 34064065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 46046422 - 46046481
Alignment:
Q  154 taaatgtagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||| |||||||||||| | |||||||  ||||||||||||||||||||  ||||||||    
T  46046422 taaatatagggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtc 46046481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 9516611 - 9516661
Alignment:
Q  163 ggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||  |||||||||  |||||||||||||||||||| |||||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtc 9516661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 31944272 - 31944326
Alignment:
Q  482 acagggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||| ||||||||||||| ||||| ||||||||| ||||||||||| ||||||||    
T  31944272 acagagactaaaaccgaaattcgctaatattacaaggacgaaaagaagtatttac 31944326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 34063983 - 34064033
Alignment:
Q  163 ggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||| |||||||||  ||||||||||| ||||||| ||||||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtc 34064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 41947180 - 41947230
Alignment:
Q  486 ggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||| ||||| ||||||||| |||||||||||| |||||||    
T  41947180 ggactaaaaccgaaattcgctaatattacagggacgaaaagagatatttac 41947230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 48259879 - 48259825
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||| |||||||| ||||||| ||||||||| |||||||||||| |||||||    
T  48259879 acagggattaaaaccggaattcgctaatattacagggacgaaaagagatatttac 48259825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 3273619 - 3273672
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||  |||||||||  ||||||||||||||||||||  ||||||||    
T  3273619 tagggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtc 3273672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 3273883 - 3273994
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggac 519  Q
    |||||| ||||| ||||||||||||||||||| |||| || |||||||||           | |||||||||||||||| ||||| ||||||||  ||||    
T  3273883 gagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatctttttttt---atagggactaaaaccgaaattcgctaatattacg-ggac 3273978  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  3273979 gaaaagaggtatttac 3273994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 466
Target Start/End: Original strand, 7819277 - 7819322
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatcta 466  Q
    |||||||||||| ||||||||||||| ||||| ||||||| |||||    
T  7819277 gagggaccaaaagtggaagaatctgacattacagggacaaaatcta 7819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 534
Target Start/End: Complemental strand, 13131996 - 13131943
Alignment:
Q  482 acagggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtattta 534  Q
    |||||||||||||| ||| ||||  ||||||||| |||||||||||||||||||    
T  13131996 acagggactaaaacagaaattcgttaatattacaaggacgaaaagaggtattta 13131943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 15640974 - 15641015
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||| |||||||||||| ||||||||||||||| ||||    
T  15640974 aaatgaggaaccaaaagtggaagaatctgaaattacagggac 15641015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 15640978 - 15641027
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||| ||||||| ||||||||||||||||||| ||||||  |||||||||    
T  15640978 gaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatc 15641027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 26252383 - 26252346
Alignment:
Q  317 gagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  26252383 gagggaccaaaagtggaagaatctgaaattacagggac 26252346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 35376391 - 35376440
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||| ||||||||||| ||||||| || ||||||    
T  35376391 gagggaccaaaagtggaagattctgaaattacagggacaaaatttaaatc 35376440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 36888943 - 36888980
Alignment:
Q  317 gagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  36888943 gagggactaaaagtggaggaatctgaaattacagggac 36888980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 36888989 - 36888944
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||||||||| |||| ||||||||| ||||||    
T  36888989 ttagattatgtccctgtaatttcagattcctccacttttagtccct 36888944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 43312324 - 43312287
Alignment:
Q  317 gagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  43312324 gagggactaaaagtggaggaatctgaaattacagggac 43312287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 48259822 - 48259871
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagtttta 210  Q
    ||||||||||  |||||||||  |||||||||||||||||||| ||||||    
T  48259822 agggtaaatatctcttttcgtccctgtaatattagcgaattccggtttta 48259871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 3273879 - 3273915
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    |||||||||| |||||||||| |||||||||||||||    
T  3273879 aaatgagggatcaaaagtggaagaatctgaaattaca 3273915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 7819196 - 7819232
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  7819196 gtccatgtaatttcatattcctccacttttggtccct 7819232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 7819274 - 7819314
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||||||| |||||| ||||    
T  7819274 aatgagggaccaaaagtggaagaatctgacattacagggac 7819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 9516806 - 9516770
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  9516806 gtccctgtaatttcagattcctccacttttggtccct 9516770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 9619239 - 9619279
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||| |||||||||||||| |||| |||||||||||||||    
T  9619239 aatgaaggaccaaaagtggaagaatatgaaattacaaggac 9619279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 9619358 - 9619306
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||| ||  |||||||||||||||||||  |||||||||    
T  9619358 agggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtc 9619306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 12904864 - 12904824
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||| ||||||||||||| ||||||||||||| ||||||    
T  12904864 aatgagagaccaaaagtggaagaatctgaaattataaggac 12904824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 13132060 - 13132024
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    |||||||||| |||||||||| |||||||||||||||    
T  13132060 aaatgagggatcaaaagtggaagaatctgaaattaca 13132024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 31083406 - 31083362
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccc 271  Q
    ||||||||||||||| | |||| | ||||||||||||||||||||    
T  31083406 ttagattttgtccctatcatttgagattcttccacttttggtccc 31083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 31090179 - 31090139
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  31090179 aatgagggaccaaaagtggaagaatatgaaattacagggac 31090139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 31944329 - 31944277
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||   ||||||||||||||||| | |||||||||    
T  31944329 agggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtc 31944277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 35376388 - 35376428
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| || |||||||||||| ||||    
T  35376388 aatgagggaccaaaagtggaagattctgaaattacagggac 35376428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 35376494 - 35376454
Alignment:
Q  173 tcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||  ||||||||||||| ||||||||||||||||    
T  35376494 tcttttcgtccctgtaatattagcaaattccagttttagtc 35376454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 37012821 - 37012785
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  37012821 agggaccaaaagtggaagaatctgaaattacagggac 37012785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 37013085 - 37013033
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| || ||||||  |||||||||||||||||||  |||||||||    
T  37013085 agggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtc 37013033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 38574086 - 38574046
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  38574086 aatgagggaccaaaagtggaagaatatgaaattacagggac 38574046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 38574160 - 38574128
Alignment:
Q  240 ctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||| ||||||||||||||||    
T  38574160 ctgtaatttcatattcctccacttttggtccct 38574128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 46046802 - 46046751
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| | |||||||  |||||||||||||||||||| |||||||||    
T  46046802 agggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtc 46046751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 470
Target Start/End: Complemental strand, 48579980 - 48579932
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| || |||||||||||||||| | ||||| |||||||||    
T  48579980 agggaccaaaattgaaagaatctgaaattacagagacaaaatctaaatc 48579932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 1e-95; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 24732247 - 24731937
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  24732247 ttagattttgtccatgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaa 24732148  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||  |||||| |||||||||    
T  24732147 aagtggaggaatctgaaattatagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgtagattatgttgacttgatgaaaggaggga 24732048  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaa-atcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaa 524  Q
    |||||| | ||||||||||||||||| ||||||| ||||||  |            ||||||||||||||| |||||||| ||||||||| |||||||||    
T  24732047 ccaaaagtagaagaatctgaaattacagggacaaaatctaatttttttttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaa 24731948  T
Q  525 gaggtatttac 535  Q
    |||||||||||    
T  24731947 gaggtatttac 24731937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 227 - 534
Target Start/End: Original strand, 26385347 - 26385649
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  26385347 ttagattttgtccctgtaattttatattcttccacttttggtccctcattccaccacgtaagcagaatctgtatacatggcacgtaaaatgagggaccaa 26385446  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||||||| |||    ||  |||||| |||||| ||    
T  26385447 aagtggaggaatctgaaattacagggaccaaaactgggaggaatatgaaattacagggacgt-atttatgcatatt---atgacttgatgaaaggagaga 26385542  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaa-ccgaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||| | || ||||||||||||||           ||||||||||||| | |||||||| ||||||||| ||||||||||    
T  26385543 ccaaaagtggaagaatatgaaattgcaggaacaacatctaaatc--tttgtttttacagggactaaaatcggaattcgctaatattacagggacgaaaag 26385640  T
Q  526 aggtattta 534  Q
    |||||||||    
T  26385641 aggtattta 26385649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 9481491 - 9481184
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| |||| ||| | ||||||||||||| |||||||||||| ||    
T  9481491 ttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgcaaaatgagggacaaa 9481392  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || ||||||||| |||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||| | ||   ||||| |||||||||    
T  9481391 aaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggaggga 9481292  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||  |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  9481291 ccaaaattggaagaatatgaaattacagggacataatctaaatc--cttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaag 9481194  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  9481193 aggtatttac 9481184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 236 - 466
Target Start/End: Original strand, 2299389 - 2299617
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggagg 335  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| ||    
T  2299389 gtccctgtaatttca-attcttccacttttagtccctcattccaccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtggcgg 2299487  T
Q  336 aatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatg 435  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  |||||| |||||||||  |||| ||    
T  2299488 aatctaaaattacaaggaccaaaagtgggaggaatctgaaa-tacagggacgtaatttatgcagattctgttgacttgatgaaaggagggataaaaagtg 2299586  T
Q  436 gaagaatctgaaattacggggacaacatcta 466  Q
    ||||||||||||||||| ||||||| |||||    
T  2299587 gaagaatctgaaattacagggacaaaatcta 2299617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 227 - 469
Target Start/End: Complemental strand, 30618270 - 30618029
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||| | |||||||||||||| ||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30618270 ttagattttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggaccaa 30618171  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| ||||||||||  || ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||   ||||  |||||||||    
T  30618170 aagtggaggaatttgaaattacagtgatcaaaagtggga-gaatctgaaattacagggacgtaatttatgcagattctgctgacgtgataaaaggaggga 30618072  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||| ||||| ||| ||||||||| ||||||| ||||||||    
T  30618071 ccaaaagtggaacaatatgaaattacagggacaaaatctaaat 30618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 227 - 403
Target Start/End: Original strand, 33714556 - 33714732
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  33714556 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaa 33714655  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattc 403  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  33714656 aagtggaggaatctgaaattacagagaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattc 33714732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 166 - 459
Target Start/End: Original strand, 10321737 - 10322032
Alignment:
Q  166 aaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnnttagattttgtccctgtaatttcatattcttccacttt 264  Q
    |||||| |||||||||  |||||||||||||||||||| |||||||||  ||          ||||||| | ||||||||||||||||||||| ||||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctgaaaaaaaatattagattatatccctgtaatttcatattcttacacttt 10321836  T
Q  265 tggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacaaggaccaaaagtgg 363  Q
    || ||||| ||| |||||||| ||||| |||| ||||||||||||||||||| |||| | |||| | |||| |||||||||||||| | |||||||||||    
T  10321837 tgctccctcatttcaccacgtcagcagtatctgcatacatggcacgtaaaataaggggctaaaaattggagtaatctgaaattacatgaaccaaaagtgg 10321936  T
Q  364 gaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggaca 459  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||   ||||| ||||| ||||||||| || |||||||||||||||| ||||||    
T  10321937 gaggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaattacagggaca 10322032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 227 - 386
Target Start/End: Original strand, 18500383 - 18500543
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  18500383 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaa 18500482  T
Q  327 aagtggaggaatct-gaaattacaaggaccaaaagtgggaggaatct-gaaattacagggac 386  Q
    ||||||||||||||  |||||||| ||||||||||| ||||||||||  |||||||||||||    
T  18500483 aagtggaggaatctaaaaattacagggaccaaaagt-ggaggaatctaaaaattacagggac 18500543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 227 - 452
Target Start/End: Original strand, 30458970 - 30459195
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| |||| ||||||||||| ||||||| |||||| ||| || ||| |||||||| |||||||||| |||||||| ||||||||||||| || |||    
T  30458970 ttagattatgtcactgtaatttcagattcttcaacttttagtctctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagagatcaa 30459069  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||| |  ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||  | |    ||||| |||||| ||    
T  30459070 aagtgaaataatctgaaattacaaggaccaaaagtgggaggaatttgaaattatagggacgtaatttatggagattatgctaacgtgatgaaaggagaga 30459169  T
Q  427 ccaaaaatggaagaatctgaaattac 452  Q
    |||||| || ||||||||||||||||    
T  30459170 ccaaaagtgaaagaatctgaaattac 30459195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 227 - 403
Target Start/End: Original strand, 14680951 - 14681127
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||  |||||||||||||||||||||||||||||| | ||| |||||||| |||||||||| |||||||| ||||| ||| ||| ||||||    
T  14680951 ttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcatacatgacacgtgaaaagagagaccaa 14681050  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattc 403  Q
    |||||||| |||||||||||| | |||||||||||| ||| |||||||||||||||||||||||| | |||||||||    
T  14681051 aagtggagaaatctgaaattatatggaccaaaagtgagagtaatctgaaattacagggacgtaatatgtgcagattc 14681127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 287 - 470
Target Start/End: Original strand, 3229992 - 3230174
Alignment:
Q  287 agcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggac 386  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  3229992 agcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggac 3230091  T
Q  387 gtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    || |||||||||||||| ||||   ||||| || ||  |||||||| || |||||| ||||||||   |||||| |||||||||    
T  3230092 gtgatttatgcagattctgttgacgtgatgaaaaga-tgaccaaaagtgaaagaatatgaaattatatggacaaaatctaaatc 3230174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 233 - 354
Target Start/End: Complemental strand, 33637831 - 33637709
Alignment:
Q  233 tttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt-g 331  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||||||||| |||||||||| |||||||  |||||||||||||||||||||||| |    
T  33637831 tttgtccctgtaatttcatattctttcacttttgatccctcattccaccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaagtgg 33637732  T
Q  332 gaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||| ||||    
T  33637731 gaggaatctgaaattacagggac 33637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 32017619 - 32017727
Alignment:
Q  241 tgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatct 340  Q
    |||||||||| ||||||||||||||||||| | |||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  32017619 tgtaatttcagattcttccacttttggtcctttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaattt 32017718  T
Q  341 gaaattaca 349  Q
    |||||||||    
T  32017719 gaaattaca 32017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 318 - 452
Target Start/End: Original strand, 18500506 - 18500641
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaa-ttacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatg 416  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||| | | |||||||||||||||||| |||||||||||||||| ||||  ||||||    
T  18500506 agggaccaaaagtggaggaatctaaaaattacagggaccaaaagtggaaaggatctgaaattacagggacataatttatgcagattctgttgccttgatg 18500605  T
Q  417 taaggagggaccaaaaatggaagaatctgaaattac 452  Q
     ||||||||||||||| ||||||||||| |||||||    
T  18500606 aaaggagggaccaaaagtggaagaatctaaaattac 18500641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 351 - 535
Target Start/End: Original strand, 32017698 - 32017879
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||| |||| | ||   ||||| ||||||||||||||| ||||||||| |||||||    
T  32017698 ggaccaaaagtgg-aggaatttgaaattacagggatgtaatttatgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 32017796  T
Q  451 acggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    || ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||    
T  32017797 acagggacaaaatctaaatc---ttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttac 32017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 318 - 400
Target Start/End: Original strand, 17142798 - 17142880
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcaga 400  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacagggacctaatttatacaga 17142880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 351 - 470
Target Start/End: Complemental strand, 33637744 - 33637625
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||   | ||| ||||||||||||||| ||||||||||| |||||    
T  33637744 ggaccaaaagtgggaggaatctgaaattacagggacgtaatctatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaaatt 33637645  T
Q  451 acggggacaacatctaaatc 470  Q
    ||  | |||| |||||||||    
T  33637644 acaagaacaaaatctaaatc 33637625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 9854196 - 9854116
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggc 307  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||| ||||||||||    
T  9854196 ttagattttgtccttgtaatttcatattcttccacttttggtccctcatttcaccacgtcagcaaaatctgcatacatggc 9854116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 32017813 - 32017768
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32017813 ttagattttgtccctgtaatttcatattcttccacttttggtccct 32017768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 272
Target Start/End: Original strand, 19284130 - 19284243
Alignment:
Q  163 ggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc-atgtnnnnnnnnn---ttagattttgtccctgtaatttcatattcttc 258  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||||| | ||            |||||||||||||||||||||||| |||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttc 19284229  T
Q  259 cacttttggtccct 272  Q
    ||||||||||||||    
T  19284230 cacttttggtccct 19284243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 9481251 - 9481325
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||  || || ||||| |||||||||| ||||    
T  9481251 ttagattatgtccctgtaatttcatattcttccaattttggtccctcctttcatcacgtcagcagaatctgcata 9481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 19284253 - 19284195
Alignment:
Q  412 tgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  19284253 tgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 19284195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 30618031 - 30618105
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  ||  | ||||| |||||||||| ||||    
T  30618031 ttagattttgtccctgtaatttcatattgttccacttttggtccctccttttatcacgtcagcagaatctgcata 30618105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 18500429 - 18500317
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||           |||||||||||||||||| ||||| ||||||| | ||||    
T  18500429 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttctt---acagggactaaaaccgaaattcgctaatattatagggac 18500333  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  18500332 gaaaagaggtatttac 18500317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 24731931 - 24731986
Alignment:
Q  158 tgtagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  24731931 tgtagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 24731986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 24732007 - 24732052
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  24732007 ttagattttgtccctgtaatttcagattcttctacttttggtccct 24732052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 2299693 - 2299641
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt 212  Q
    |||||||||||  |||||||||| |||||||||||||||||||| ||||||||    
T  2299693 tagggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagt 2299641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 24732201 - 24732313
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaattcgcaaatattacatggacg 520  Q
    |||||||||||| ||||||||| |||||||||  |||||| |||||||||           ||||||||||||   |||||||| ||||||||| |||||    
T  24732201 gagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatcttttttttt--acagggactaaattggaattcgctaatattacagggacg 24732298  T
Q  521 aaaagaggtatttac 535  Q
    |||||||||||||||    
T  24732299 aaaagaggtatttac 24732313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 9481182 - 9481233
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 9481233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 17142746 - 17142788
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  17142746 ttagattatgtccctgtaatttcaaattcttccacttttggtc 17142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 18500655 - 18500705
Alignment:
Q  486 ggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttac 18500705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 2299617 - 2299580
Alignment:
Q  228 tagattttgtccctgtaatttcatattcttccactttt 265  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttt 2299580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 9154949 - 9154990
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggt 268  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  9154949 ttagattttgtccctgtaatttcagattcttccagttttggt 9154990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 9854146 - 9854187
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  9854146 aaatgagggaccaaaagtggaagaatatgaaattacaaggac 9854187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 18500709 - 18500656
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||||||||||||| | |||||||||    
T  18500709 tagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 18500656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 26385393 - 26385280
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| | ||||||| ||||||| |||||||||           ||| ||||||||||| |||||||| |||||||||  |||    
T  26385393 gagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatctttttttct--acatggactaaaaccagaattcgctaatattacagagac 26385296  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  26385295 gaaaagaggtatttac 26385280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 9154990 - 9154946
Alignment:
Q  426 accaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaatctaaatc 9154946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 9481446 - 9481494
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| |||||||||||||||||||  |||||| |||||||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 9481494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 9481446 - 9481482
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||||||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggac 9481482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 32017882 - 32017830
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||  |||||||||  |||||||||||||||||||| |||||||||    
T  32017882 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtc 32017830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 33714605 - 33714565
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  33714605 aatgagggaccaaaagtggaagaatatgaaattacaaggac 33714565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 533
Target Start/End: Complemental strand, 10321788 - 10321737
Alignment:
Q  483 cagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtattt 533  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||    
T  10321788 cagggactaaaaccggaattcgctaatattacagggacgaaaagaagtattt 10321737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 24732316 - 24732273
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattcca 204  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  24732316 agggtaaatacctcttttcgtccctgtaatattagcgaattcca 24732273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 26385278 - 26385329
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||| |||||||||  |||||||||||||||||||  |||||||||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtc 26385329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 3230171 - 3230129
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    ||||||||||||| | ||||||||||||||| |||||||||||    
T  3230171 ttagattttgtccatataatttcatattctttcacttttggtc 3230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 10322032 - 10321966
Alignment:
Q  235 tgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||| |||||| |||||||||||| |  || || ||||| |||||||||| ||||    
T  10322032 tgtccctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcata 10321966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 17142834 - 17142796
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccctga 274  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  17142834 gtccctgtaatttcagattcctccacttttggtccctga 17142796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 535
Target Start/End: Complemental strand, 19284181 - 19284131
Alignment:
Q  486 ggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||| | ||||||| ||||||||||| ||||||||||||||||||    
T  19284181 ggactaaaactggaattcgctaatattacatgaacgaaaagaggtatttac 19284131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 26385583 - 26385541
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||| |||| |||| ||||||||||||||||||||||||||    
T  26385583 ttagatgttgttcctgcaatttcatattcttccacttttggtc 26385541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 33637628 - 33637702
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||| | |||||||| | |||||||||||||||||||||  || ||  |||| |||||||||| ||||    
T  33637628 ttagattttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcata 33637702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 14681141 - 14681182
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||| ||||||||||||||||||||||| ||||| |||||||    
T  14681141 aaataagggaccaaaagtggaggaatctaaaattgcaaggac 14681182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 19284244 - 19284207
Alignment:
Q  317 gagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  19284244 gagggaccaaaagtggaagaatctgaaattacagggac 19284207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 33714602 - 33714553
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||| |||||||||  |||||| |||||||||    
T  33714602 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 33714553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 3230059 - 3230023
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  3230059 gtccttgtaatttcatattcctccacttttggtccct 3230023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 9854150 - 9854198
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||||||||| ||||||||| |||||||||  |||||| ||||||||    
T  9854150 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaat 9854198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 18500432 - 18500392
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  18500432 aatgagggaccaaaagtggaagaatatgaaattacagggac 18500392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 24732198 - 24732238
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  24732198 aatgagggaccaaaagtggaagaatatgaaattacatggac 24732238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 26385474 - 26385438
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  26385474 gtccctgtaatttcagattcctccacttttggtccct 26385438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 26385649 - 26385601
Alignment:
Q  165 taaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||| |||||||||  ||||||||||||||||||||  ||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtc 26385601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 4e-95; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 22263260 - 22263569
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  22263260 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaa 22263359  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||  | ||   ||||| |||||||||    
T  22263360 aagtggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattatgctgacgtgatgaaaggaggga 22263459  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||| |||| ||||           |||| |||||||||| |||||||| ||||||||| | ||||||||    
T  22263460 ccaaaagtggaagaatatgaaattacagggacaaaatctgaatctttttttttttacagagactaaaaccggaattcgctaatattacaggaacgaaaag 22263559  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  22263560 aggtatttac 22263569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 227 - 466
Target Start/End: Complemental strand, 23806261 - 23806022
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| | |||||||||||||||||||||||||||||    
T  23806261 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaa 23806162  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||   ||||| |||||||||    
T  23806161 aagtggaggaatctgaaattatagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcggattctgctgacgtgatgaaaggaggga 23806062  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatcta 466  Q
    |||||| ||||||||||| ||||||| ||| ||| |||||    
T  23806061 ccaaaagtggaagaatctaaaattacaggggcaaaatcta 23806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 17463400 - 17463160
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  17463400 ttagattttgtccctgtaattgcatattcttccacttttgatccctcattccaccatgtaagcagaatctgcatacatggcatgtaaaatgagggaccaa 17463301  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| || ||||||    
T  17463300 aattagaggaatctaaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaatgaggga 17463201  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |||||| ||| |||| |||||||||| ||||||| ||||||    
T  17463200 ccaaaagtgggagaacctgaaattacagggacaaaatctaa 17463160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 26136126 - 26135883
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||  |||||||||||||||||||||||||| || ||  ||||| |||||||||||||||| ||||||||| ||||||||| |||||||||    
T  26136126 ttagattttgtcattgtaatttcatattcttccacttttgatctctcgttccatcacgtaagcagaatctgcatacatggtacgtaaaataagggaccaa 26136027  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||  |||||| |||||||||    
T  26136026 aagtggaggaatctaaaattacaaggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggaggga 26135927  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| | ||||||||||||||||| ||||||| |||||||||    
T  26135926 ccaaaagtagaagaatctgaaattacagggacaaaatctaaatc 26135883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 15106376 - 15106133
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||| |||    
T  15106376 ttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatcaa 15106277  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| ||||||||| || ||   ||||| |||||||||    
T  15106276 aagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacttaattgatgcagatttagctgacgtgatgaaaggaggga 15106177  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||| ||||| ||||||| ||||||| |||||||||    
T  15106176 ccaaaagtggaataatctaaaattacagggacaaaatctaaatc 15106133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 26560623 - 26560931
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  26560623 ttagatttagtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaa 26560722  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||   ||||| |||||| ||    
T  26560723 aagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagaga 26560822  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||   |||||| |||||| |            || |||||||||| || ||||||| ||||||||| ||||||||||    
T  26560823 ccaaaagtggaagaatatgaaattatatggacaaaatctaatt-tttttttttttaccgggactaaaatcggaattcgctaatattacaaggacgaaaag 26560921  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  26560922 aggtatttac 26560931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 17850655 - 17850962
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||| ||||||||| | ||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||| || |||||||||||| |||    
T  17850655 ttagattttgtctctgtaatttaagattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggtacctaaaatgagggatcaa 17850754  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||||| |||||||||  | ||   ||||| || ||||||    
T  17850755 aagtggaggaatctgaaattaaaggaaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaagaggga 17850854  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| ||||||| |           |||| ||||||||||| ||||||| ||||||||| ||||||||||    
T  17850855 ccaaaagtggaagaatctgaaattacagggacaaaatctaaagc--attttatttacagtgactaaaaccgaaattcgctaatattacagggacgaaaag 17850952  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  17850953 aggtatttac 17850962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 227 - 470
Target Start/End: Original strand, 42670788 - 42671031
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| ||| | | |||||||||||||||||||||||||||    
T  42670788 ttagattttgtccttgtaatttcatattcttccacttttggtcccttattccaccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaa 42670887  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || ||||||||| |||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||| | ||   ||||| |||||||||    
T  42670888 aaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggaggga 42670987  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||| ||| ||||||||| ||||||  |||||||||    
T  42670988 ccaaaagtggaaaaatatgaaattacagggacataatctaaatc 42671031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 227 - 532
Target Start/End: Complemental strand, 19251779 - 19251476
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||| ||| |||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  19251779 ttagattctgtccttgtaatttcatattcttccactttcggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgatggaccaa 19251680  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||| ||||||| |||||||| |||||||||| | || ||||||||| | |||| | ||   ||||| |||||||||    
T  19251679 aagtggaggaatatgaaattacagggatcaaaagttggaggaatttgaaattacaagaacataatttatgtatattctgctgatgtgatgaaaggaggga 19251580  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||           |||||||||||||||| ||||||| ||||||||| ||||||||||    
T  19251579 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatc---ttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaag 19251483  T
Q  526 aggtatt 532  Q
    |||||||    
T  19251482 aggtatt 19251476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 20499054 - 20498749
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| |||||| |||||||||||| | ||| |||||| | |||||||||| ||||||| ||||||||||||||||| |||    
T  20499054 ttagattttgtccctgtaatttcagattctttcacttttggtccttcatttcaccacatcagcagaatctgcatacatagcacgtaaaatgagggatcaa 20498955  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||  ||||||||||||| |||||||||||||||||||| |||||||| |  ||||||||||||||||||||   ||   ||||  |||||||||    
T  20498954 aagtggagtgatctgaaattacagggaccaaaagtgggaggaatatgaaattatattgacgtaatttatgcagattctactgacgtgataaaaggaggga 20498855  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||| ||| ||||||  ||||||||            |||||||||||||||| ||||||| |||||||||| |||||||||    
T  20498854 ccaaaagtggaagaatctgaaa-tacagggacataatctaaat---attttttttacagggactaaaaccgtaattcgctaatattacatagacgaaaag 20498759  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  20498758 aggtatttac 20498749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 236 - 452
Target Start/End: Complemental strand, 39878402 - 39878186
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggagg 335  Q
    ||||||||||||||| ||| || |||||||||||||| ||| |||||||  |||||||||| |||| ||| ||||||||||||||||||||||||||||     
T  39878402 gtccctgtaatttcagattttttcacttttggtccctcatttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagt 39878303  T
Q  336 aatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatg 435  Q
    |||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||  | ||  |||||| |||||| |||||||| ||    
T  39878302 aatctgaaattagagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtg 39878203  T
Q  436 gaagaatctgaaattac 452  Q
    |||||||||||||||||    
T  39878202 gaagaatctgaaattac 39878186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 234 - 466
Target Start/End: Original strand, 13284484 - 13284716
Alignment:
Q  234 ttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtgga 333  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||  | |||||||| |||||||| ||||| ||||||||||||||||||| |    
T  13284484 ttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatctgcatacatgacacgtgaaatgagggaccaaaagtgaa 13284583  T
Q  334 ggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaa 433  Q
    | ||| |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| |||||| ||||   || |  || ||||||||||||     
T  13284584 gaaatatgaaattacagggaccaaaagtgggaggaatcttaaattacaaggacgtaatttatgtagattctgttgacgtggttaaatgagggaccaaaag 13284683  T
Q  434 tggaagaatctgaaattacggggacaacatcta 466  Q
    |||| ||||||||||||||  |||||| |||||    
T  13284684 tggaggaatctgaaattacaaggacaaaatcta 13284716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 290 - 469
Target Start/End: Original strand, 23854798 - 23854977
Alignment:
Q  290 agaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgta 389  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  23854798 agaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgta 23854897  T
Q  390 atttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||||||||||| | ||   ||||| ||||||||||||||| ||||||||| | ||||||| | ||||| ||||||||    
T  23854898 atttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatctaaat 23854977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 227 - 403
Target Start/End: Complemental strand, 33290358 - 33290182
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||| || |||||||||||||||||||||||||||||||| ||| |||||||| |  | ||||| |||||||||| | | ||||||||||||||    
T  33290358 ttagattttgaccttgtaatttcatattcttccacttttggtccctaatttcaccacgtcaaaaaaatctgcatacatggctcatgaaatgagggaccaa 33290259  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattc 403  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  33290258 aagtggaggtatctgaaattacagggaccaaaagggggaggaatctgaaattacagggacgaaatttatgcagattc 33290182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 26236404 - 26236277
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26236404 ttagattttgtccctgtaatttcagattcttccatttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaa 26236305  T
Q  327 aagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||| |||||||||| ||||    
T  26236304 aagtggaggaatatgaaattacagggac 26236277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 30390528 - 30390655
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  30390528 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaa 30390627  T
Q  327 aagtggaggaatctgaaattacaaggac 354  Q
    || || ||||||||||||||||| ||||    
T  30390628 aaatgaaggaatctgaaattacagggac 30390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 351 - 535
Target Start/End: Complemental strand, 26236311 - 26236129
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| |||| | ||   ||||| ||||||||||||||| || ||||||||||||||    
T  26236311 ggaccaaaagtgg-aggaatatgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaatt 26236213  T
Q  451 acggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    || ||||||| || ||||||           ||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||    
T  26236212 acagggacaaaatataaatc--tttttttatacagggactaaaaccagaattcgctaatattacaaggacgaaaagagatatttac 26236129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 13254733 - 13254638
Alignment:
Q  239 cctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggag 334  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||| |||||||||||   ||||||| ||||||||||||||||||||||||||||    
T  13254733 cctgtaatttcagattcttccacttttggtccctcatttcaccacataagcagaatcagtatacatgacacgtaaaatgagggaccaaaagtggag 13254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 19251539 - 19251613
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || || ||| | |||||||| ||||||    
T  19251539 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacatcagcagaatatacata 19251613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 26236358 - 26236470
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||            || |||||||||||| ||||||| ||||||||| ||||    
T  26236358 gagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttc---caaggactaaaaccgaaattcgctaatattacagggac 26236454  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  26236455 gaaaagaggtatttac 26236470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 22263498 - 22263426
Alignment:
Q  229 agattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || || ||||| |||| ||||| ||||    
T  22263498 agattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcataatctgcata 22263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 17850965 - 17850850
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn---ttagattttgtccctgtaatttcatattct 256  Q
    ||||||||||| |||||||||  |||||||||||||||||| | |||||||||| |||            |||||||||||||||||||||||| |||||    
T  17850965 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattct 17850866  T
Q  257 tccacttttggtccct 272  Q
    ||||||||||||||||    
T  17850865 tccacttttggtccct 17850850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 23854975 - 23854901
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||  || || ||||| |||||||||| ||||    
T  23854975 ttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 23854901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 42671028 - 42670954
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||  || || ||||| |||||||||| ||||    
T  42671028 ttagattatgtccctgtaatttcatatttttccacttttggtccctcctttcatcacgtcagcagaatctgcata 42670954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 13284716 - 13284643
Alignment:
Q  228 tagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||| |||||||||| |||| |||||||||||||||| |||  ||||||| | |||||||||||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgtcaacagaatctacata 13284643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 23806215 - 23806328
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||           |||||||||||||||||| ||||| ||||||||| ||||    
T  23806215 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttt--acagggactaaaaccgaaattcgctaatattacagggac 23806312  T
Q  520 gaaaagaggtatttac 535  Q
     |||||||||||||||    
T  23806313 aaaaagaggtatttac 23806328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 22263572 - 22263520
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  22263572 agggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtc 22263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 23854757 - 23854797
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttgg 267  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23854757 ttagattttgtccctgtaatttcatattcttccacttttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 26560863 - 26560789
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||  || || ||||| |||||||||| ||||    
T  26560863 ttagattttgtccatataatttcatattcttccacttttggtctctcctttcatcacgtcagcagaatctgcata 26560789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 33290118 - 33290192
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||| ||||| |||||||||||| || |||||||||||||||| |||  ||||||| |||||||||| ||||    
T  33290118 ttagattctgtccttgtaatttcatactcctccacttttggtcccttatttaaccacgtcagcagaatctgcata 33290192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 26135886 - 26135931
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  26135886 ttagattttgtccctgtaatttcagattcttctacttttggtccct 26135931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 427 - 532
Target Start/End: Complemental strand, 23854797 - 23854693
Alignment:
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||           |||||||||||||||||| ||||| ||||||||| ||||||||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttt--acagggactaaaaccgaaattcgctaatattacagggacgaaaag 23854700  T
Q  526 aggtatt 532  Q
    |||||||    
T  23854699 aggtatt 23854693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 295
Target Start/End: Original strand, 23806022 - 23806089
Alignment:
Q  228 tagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatc 295  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||  || || ||||| |||||||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatc 23806089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 26236200 - 26236263
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaat 294  Q
    |||||||||||||||||||| |||||| ||||||||||||||  || || ||||| ||||||||    
T  26236200 attttgtccctgtaatttcagattctttcacttttggtccctcctttcatcacgtcagcagaat 26236263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 15106330 - 15106441
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||| ||||| ||||||||||||||||||| ||||||| ||||||||            ||||||||||||| || ||||||| ||||||||  ||||    
T  15106330 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat----ttttttttacagggactaaaatcgaaattcgctaatattacggggac 15106425  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  15106426 gaaaagaggtatttac 15106441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 17463160 - 17463234
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||| ||| || || || | |||||||| ||||    
T  17463160 ttagattttgtccctgtaatttcaggttctcccacttttggtccctcatttcatcaagtcaacagaatctgcata 17463234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 17463413 - 17463467
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||||| ||||||| ||||||||| || |||||||||||||||||    
T  17463413 acagggactaaaaccggaattcgctaatattacaggggcgaaaagaggtatttac 17463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 19251791 - 19251845
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  19251791 acagggactaaaaccggaattcactaatattacaaggacgaaaagaggtatttac 19251845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 23855079 - 23855025
Alignment:
Q  155 aaatgtagggtaaatacatcttttcgttactgtaatattagcgaattccagtttt 209  Q
    |||||| |||||||||| |||||||||  |||||||||||||||||||| |||||    
T  23855079 aaatgttgggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 15106136 - 15106181
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||    
T  15106136 ttagattttgtccctgtaattttagattattccacttttggtccct 15106181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 402
Target Start/End: Original strand, 30390634 - 30390671
Alignment:
Q  365 aggaatctgaaattacagggacgtaatttatgcagatt 402  Q
    |||||||||||||||||||||| |||||||||||||||    
T  30390634 aggaatctgaaattacagggacataatttatgcagatt 30390671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 13254695 - 13254731
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    ||||||||||||||||||||| |||||||||||||||    
T  13254695 aaatgagggaccaaaagtggaagaatctgaaattaca 13254731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 17463470 - 17463418
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| ||||||||   |||||||||||||||||||| |||||||||    
T  17463470 agggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtc 17463418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 17850641 - 17850589
Alignment:
Q  484 agggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||||||| || ||||||| ||||||||| ||||||||||||||||||||    
T  17850641 agggactaaaatcggaattcgctaatattacagggacgaaaagaggtatttac 17850589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Complemental strand, 22263305 - 22263257
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  22263305 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 22263257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 26236277 - 26236313
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||| ||||||||||||||||    
T  26236277 gtccctgtaatttcatattcctccacttttggtccct 26236313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 26236473 - 26236421
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  |||||||||||||||||| | |||||||||    
T  26236473 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 26236421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Complemental strand, 26560668 - 26560620
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| ||||||||||||||||||| ||||| | |||||||||    
T  26560668 agggaccaaaagtggaagaatctgaaattacagggactaaatctaaatc 26560620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 17850587 - 17850638
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||| |||||||||  ||||||||||||||||||||  ||||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtc 17850638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 532
Target Start/End: Complemental strand, 42670773 - 42670722
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatt 532  Q
    |||||||||||||||| ||||||| | ||||||| |||||||||||||||||    
T  42670773 acagggactaaaaccggaattcgctactattacagggacgaaaagaggtatt 42670722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 13254621 - 13254563
Alignment:
Q  412 tgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||| ||||||| ||||||| || ||||||||||||||||  |||||| |||||||||    
T  13254621 tgatgaaaggaggaaccaaaagtgaaagaatctgaaattacaaggacaaaatctaaatc 13254563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 20499011 - 20499057
Alignment:
Q  424 ggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||| || |||||||||||||||| ||||||| |||||||||    
T  20499011 ggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatc 20499057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 535
Target Start/End: Original strand, 23855032 - 23855070
Alignment:
Q  497 gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  23855032 gaattcgctaatattacagggacgaaaagaggtatttac 23855070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 26136143 - 26136193
Alignment:
Q  486 ggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  26136143 ggactaaaaccgaaattcgttaatattacaaggacgaaaagaggtatttac 26136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 467
Target Start/End: Complemental strand, 30390574 - 30390528
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |||||||||||| ||||||||| ||||||||| ||||||| ||||||    
T  30390574 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 30390528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 30959981 - 30959943
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccactttt 265  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  30959981 ttagattatgtccctgtaatttcatattcctccactttt 30959943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 34548642 - 34548684
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    ||||||||||||| |||||||||||||| |||||| |||||||    
T  34548642 ttagattttgtccatgtaatttcatattgttccacctttggtc 34548684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 13254495 - 13254536
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaatt 201  Q
    |||||||||||| ||||| |||| ||||||||||||||||||    
T  13254495 tagggtaaatacctctttccgttcctgtaatattagcgaatt 13254536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 13254566 - 13254607
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggt 268  Q
    ||||||||||||| |||||||||| |||||| ||||||||||    
T  13254566 ttagattttgtccttgtaatttcagattctttcacttttggt 13254607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 534
Target Start/End: Original strand, 13254758 - 13254811
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtattta 534  Q
    |||| ||||||||||| ||||||| ||||||||| |||||||||||| ||||||    
T  13254758 acagagactaaaaccggaattcgctaatattacagggacgaaaagagatattta 13254811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 270
Target Start/End: Original strand, 19251653 - 19251686
Alignment:
Q  237 tccctgtaatttcatattcttccacttttggtcc 270  Q
    ||||||||||||||||||| ||||||||||||||    
T  19251653 tccctgtaatttcatattcctccacttttggtcc 19251686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 19251729 - 19251770
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||| |||||||| |||| |||||||||||||||    
T  19251729 aaatgagggaccgaaagtggaagaatatgaaattacaaggac 19251770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 19251849 - 19251796
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||   ||||||||||| ||||||| |||||||||    
T  19251849 tagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 19251796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 20498745 - 20498798
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||   ||||||||||||||||| | |||||||||    
T  20498745 tagggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtc 20498798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 20498815 - 20498859
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||    
T  20498815 ttagattatgtccctgta-tttcagattcttccacttttggtccct 20498859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 21482189 - 21482144
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||||| |||| | |||||||||||||| ||||||    
T  21482189 ttagattttgtccctgtcattttagattcttccacttttagtccct 21482144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 21482235 - 21482206
Alignment:
Q  184 ctgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||||||||||||||||||||||    
T  21482235 ctgtaatattagcgaattccagttttagtc 21482206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 23046776 - 23046813
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttt 264  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  23046776 ttagattctgtccctgtaatttcagattcttccacttt 23046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 33290071 - 33290100
Alignment:
Q  184 ctgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||||||||||||||||||||||    
T  33290071 ctgtaatattagcgaattccagttttagtc 33290100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 33290168 - 33290127
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||| ||||||||||||||||||| | |||||||||||||||    
T  33290168 aaataagggaccaaaagtggaggagtatgaaattacaaggac 33290127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 44098931 - 44098894
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttt 264  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  44098931 ttagattatgtccctgtaatttcagattcttccacttt 44098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 13254803 - 13254763
Alignment:
Q  173 tcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||  |||||||||||||||||||| |||||||||    
T  13254803 tcttttcgtccctgtaatattagcgaattccggttttagtc 13254763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 15106327 - 15106367
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  15106327 aatgagggatcaaaagtggaagaatctgaaattacagggac 15106367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 22263387 - 22263351
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  22263387 gtccctgtaatttcaaattcctccacttttggtccct 22263351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 23806212 - 23806252
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  23806212 aatgagggaccaaaagtggaagaatatgaaattacagggac 23806252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 26236355 - 26236395
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||| |||| ||||||||||||||| ||||    
T  26236355 aatgagggaccaaaaatggaagaatctgaaattacagggac 26236395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 26560668 - 26560632
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  26560668 agggaccaaaagtggaagaatctgaaattacagggac 26560632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 533
Target Start/End: Complemental strand, 30390499 - 30390463
Alignment:
Q  497 gaattcgcaaatattacatggacgaaaagaggtattt 533  Q
    |||||||| |||||||||||||||||||||| |||||    
T  30390499 gaattcgctaatattacatggacgaaaagagatattt 30390463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 30390577 - 30390537
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  30390577 aatgagggaccaaaagtggaagaatatgaaattacagggac 30390537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 42670833 - 42670797
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| |||| |||||||||||||||    
T  42670833 agggaccaaaagtggaagaatatgaaattacaaggac 42670797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 176; Significance: 1e-94; HSPs: 94)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 24837238 - 24837545
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||| |||    
T  24837238 ttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgtatacatggtacgtaaaatgagggatcaa 24837337  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||  |||||| |||||||||    
T  24837338 aagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggaggga 24837437  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaac-cgaattcgcaaatattacatggacgaaaag 525  Q
     ||||| | ||||||| ||||||||| ||||||| |||||||||           ||||||||||||||  |||||||| ||||||||| ||||||||||    
T  24837438 gcaaaagtagaagaatttgaaattacagggacaaaatctaaatc--tttttttttacagggactaaaactggaattcgctaatattacagggacgaaaag 24837535  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  24837536 aggtatttac 24837545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 163 - 470
Target Start/End: Original strand, 993751 - 994058
Alignment:
Q  163 ggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnnttagattttgtccctgtaatttcatattcttccac 261  Q
    ||||||||| |||||||||  |||||||||||||||||||| |||||||||  |||         |||||||| |||| |||||||||||||||||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaaattagatttagtccttgtaatttcatattcttccac 993850  T
Q  262 ttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagt 361  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  993851 ttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatg-aattacagggaccaaaagt 993949  T
Q  362 gggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaac 461  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||   ||||  ||||||||||||||| |||||||||||| |||||| |||||||     
T  993950 gggaggaatctgaaattacagggacgtaatttatacagattctgttgacatgataaaaggagggaccaaaagtggaagaatctgcaattacagggacaaa 994049  T
Q  462 atctaaatc 470  Q
    |||||||||    
T  994050 atctaaatc 994058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 7125986 - 7126293
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  7125986 ttagattttgtccctataatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaa 7126085  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||   ||||| |||||||||    
T  7126086 aagtggaggaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggaggga 7126185  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||           |||  ||||||||||| ||||||| ||||||||| ||| ||||||    
T  7126186 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttt--acaaagactaaaaccggaattcgctaatattacagggatgaaaag 7126283  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  7126284 aggtatttac 7126293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 14144210 - 14143904
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | |||||||| |||||||||||||||||||||||||||||    
T  14144210 ttagattttgtccctgtaatttcaaattcttccacttttggtcccttattccaccacgtcaccagaatctgcatacatggcacgtaaaatgagggaccaa 14144111  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||   ||||| || |||| |    
T  14144110 aagtggaggaatttgaaattacatggaccaaaagtggaaggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaatgaggta 14144011  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  14144010 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatc---ttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaag 14143914  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  14143913 aggtatttac 14143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 167 - 470
Target Start/End: Original strand, 7125923 - 7126229
Alignment:
Q  167 aatacatcttttcgttactgtaatattagcgaattccagttttagt-catgt--nnnnnnnnnttagattttgtccctgtaatttcatattcttccactt 263  Q
    ||||| |||||||||| ||||||||||||||||||||  ||||||| | |||           ||||||||||||||| |||||||| ||||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtccctataatttcagattcttccactt 7126022  T
Q  264 ttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgg 363  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  7126023 ttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgg 7126122  T
Q  364 gaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacat 463  Q
    ||||||| |||||||||||||||||||||||||||||||| | ||   ||||| ||||||||||||||| ||||||||| ||||||||| ||||||| ||    
T  7126123 gaggaatatgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 7126222  T
Q  464 ctaaatc 470  Q
    |||||||    
T  7126223 ctaaatc 7126229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 4919059 - 4919299
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  4919059 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgagggaccaa 4919158  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| ||||||||||  |||||||||| |||||||| |||||||||| |||||||||||||||| |||| ||||  |||||| |||||||||    
T  4919159 aagtggaggaatttgaaattacagtgaccaaaagttggaggaatatgaaattacaaggacgtaatttatgcatattctgttgacttgatgaaaggaggga 4919258  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
     ||||| | ||||||||||||||||| ||||||| ||||||    
T  4919259 tcaaaagtagaagaatctgaaattacagggacaaaatctaa 4919299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 41001422 - 41001728
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||    
T  41001422 ttagattttgtccctgtaatttcatattcttccacttttggtccttcattccaccatgtaagcagaatctgcatacatggcacgtaaaatgagggactaa 41001521  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || |||||||||||||||||||| |||||| ||||||||||||  ||||||||||| ||| ||||||||| || ||| ||||  |||||| |||||||||    
T  41001522 aaatggaggaatctgaaattacagggaccagaagtgggaggaagatgaaattacagtgacataatttatgtaggttctgttgacttgatgaaaggaggga 41001621  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||  ||||||| |||||||||           ||| ||||||||||| |||||||| ||||||||| |||||||||     
T  41001622 ccaaaagtggaagaatctgaaattatagggacaaaatctaaatc---ttttttttacaaggactaaaaccggaattcgctaatattacagggacgaaaaa 41001718  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  41001719 aggtatttac 41001728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 24074611 - 24074305
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||  ||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  24074611 ttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcagcagaatctgcatatatggcacgtaaaatgagggaccaa 24074512  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||| ||| ||||||||| |||| ||||||||||| |||||||||||||  |||||||||||||||||||||| | ||   ||||| |||||||||    
T  24074511 aagtggagaaatttgaaattac-aggatcaaaagtgggatgaatctgaaattatggggacgtaatttatgcagattctgctgacgtgatgaaaggaggga 24074413  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| ||||||||| | ||||| ||||||||            |||||||||||||||| ||||||| ||||||||||||||||||||    
T  24074412 ccaaaagtggaagaatatgaaattacagagacaaaatctaaat--atttttttttacagggactaaaaccgaaattcgctaatattacatggacgaaaag 24074315  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  24074314 aggtatttac 24074305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 17762591 - 17762285
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| || ||||||||||||||||    
T  17762591 ttagattttgtccccataatttcagattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgggacataaaatgagggaccaa 17762492  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| | |    ||||  |||||||||    
T  17762491 aagtggaggaatctaaaattacagggaccaaaagcgggaggaatatgaaattacagggacgtaatttatgcagattctgcttacgtgattaaaggaggga 17762392  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| || |||| || ||||||           ||||||||||||||| |||||||| ||||||||| |||| |||||    
T  17762391 ccaaaagtggaagaatctgaaattacaggaacaaaatataaatc---ttttttttacagggactaaaaccggaattcgctaatattacagggacaaaaag 17762295  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  17762294 aggtatttac 17762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 227 - 470
Target Start/End: Original strand, 31799709 - 31799952
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |  |||||||||| |||||||||||||||||    
T  31799709 ttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtaagcagaatttgtatacatggcatgtaaaatgagggaccaa 31799808  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||   ||||| |||||||||    
T  31799809 aagtggaggattttgaaattacagggaccaaaagtgggaggaatctgaaattaaagggacgtaatttatgcaaattctgctgacgtgatgaaaggaggga 31799908  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
     |||||  ||||||||||||||||||  |||||| |||||||||    
T  31799909 tcaaaagaggaagaatctgaaattacatggacaaaatctaaatc 31799952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 227 - 532
Target Start/End: Original strand, 20709281 - 20709584
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||| ||    
T  20709281 ttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggacaaa 20709380  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||| | ||   ||||| ||||| |||    
T  20709381 aagtggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattacagggatgtaatttatgcatattctgctgatgtgatgaaaggaagga 20709480  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    | |||| ||||||||| |||||||||  |||||| |||||||||           |||||||||||||||  ||||||  ||||||||||||||||||||    
T  20709481 caaaaagtggaagaatatgaaattacatggacaaaatctaaatc---ttttttttacagggactaaaaccaaaattcgttaatattacatggacgaaaag 20709577  T
Q  526 aggtatt 532  Q
    |||||||    
T  20709578 aggtatt 20709584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 469
Target Start/End: Original strand, 6817191 - 6817432
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  6817191 ttagattatgtccatgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaataagggaccaa 6817290  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || ||||||||||||||||||| || | |||||||||||||||| ||||||||||||||||||||||||||| |||| | ||   ||||| |||||| ||    
T  6817291 aaatggaggaatctgaaattac-agaatcaaaagtgggaggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagtga 6817389  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||| ||||||||| ||||||||| ||||||| ||||||||    
T  6817390 ccaaaagtggaagaatatgaaattacagggacaaaatctaaat 6817432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 24650769 - 24651075
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||| ||||||||||||||||||||||||||||||  || |||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  24650769 ttagattttgttcctgtaatttcatattcttccacttttggtagctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaa 24650868  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || |||||||||||||||||||| ||||| |||||||||| ||| |||||||||||||| ||||||||||| ||||| | ||   ||||| |||||||||    
T  24650869 aaatggaggaatctgaaattacagggacc-aaagtgggagaaatatgaaattacagggatgtaatttatgcggattctgctgacgtgatgaaaggaggga 24650967  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
     ||||| ||||||||||| ||||||| |||| || ||||| ||            ||| ||||||||||| |||||||| |||||||||  |||||||||    
T  24650968 tcaaaagtggaagaatctaaaattacagggataaaatctagat--tttcttttttacatggactaaaaccggaattcgctaatattacagagacgaaaag 24651065  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  24651066 aggtatttac 24651075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 173 - 470
Target Start/End: Complemental strand, 29445172 - 29444872
Alignment:
Q  173 tcttttcgttactgtaatattagcgaattccagttttagtcatgtnnnnnnnnn---ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||  |||||||||||||||||||||||||||||| |||            ||||||||||||| |||||||||| ||||||||||||||||||    
T  29445172 tcttttcgtccctgtaatattagcgaattccagttttagtcctgtaaaaaaaaagatttagattttgtccttgtaatttcagattcttccacttttggtc 29445073  T
Q  270 cctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaa 369  Q
    ||| |||||||||||| || | ||| | |||||||| ||||||||||||||||| |||| || |||||| |||||||||| ||||||||| | |||||||    
T  29445072 ccttattccaccacgtcagtaaaatttgcatacatgacacgtaaaatgagggacaaaaaatgtaggaatttgaaattacagggaccaaaactaggaggaa 29444973  T
Q  370 tctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||||||||||||||||||||||||||||||| | ||   ||||| ||||||||||||||| | ||||||| |||||||||  |||||  ||||||||    
T  29444972 tctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatctaaat 29444873  T
Q  470 c 470  Q
    |    
T  29444872 c 29444872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 18336765 - 18336534
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||| ||||||||||| |  ||||||| ||||||||||||||||||||    
T  18336765 ttagattttgtccctgtaatttcagattcttccacttttgatcccttattacaccatgtaagcagaatttgtatacatgtcacgtaaaatgagggaccaa 18336666  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||||||||||||            |||| |||||||||||||||||||||||||||||||| |||| | ||   ||||| |||||||||    
T  18336665 aagtggaggaatctgaaattaca------------gggacgaatctgaaattacagggacgtaatttatgcaaattctgctgatgtgatgaaaggaggga 18336578  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
     |||||  |||||||||||||||||| ||||||| |||||||||    
T  18336577 tcaaaagcggaagaatctgaaattacagggacaaaatctaaatc 18336534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 162 - 396
Target Start/End: Complemental strand, 23979279 - 23979042
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt-catgt---nnnnnnnnnttagattttgtccctgtaatttcatattctt 257  Q
    |||||||||| |||||||||  |||||||||||||||||||| |||||||| | |||            |||||||||||||||||||||||| ||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 23979180  T
Q  258 ccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaa 357  Q
    ||||||||||||||| ||| |||||||| |||||||||| |||||||| |||||||||||| |||||||| |||||| |||||||||||| | |||||||    
T  23979179 ccacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatga-ggaccaaacgtggagtaatctgaaattaaagggaccaa 23979081  T
Q  358 aagtgggaggaatctgaaattacagggacgtaatttatg 396  Q
    ||||||||| ||| |||||||||| ||||||||||||||    
T  23979080 aagtgggagaaatatgaaattacaaggacgtaatttatg 23979042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 14411975 - 14411847
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14411975 ttagattttgtccttgtaatttcagattcttccacgtttggtccctcattccaccacgtaagcagaatctacatacatgacacgtaaaatgagggaccaa 14411876  T
Q  327 aagt-ggaggaatctgaaattacaaggac 354  Q
    |||| ||||||||||||||||||| ||||    
T  14411875 aagtgggaggaatctgaaattacagggac 14411847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 231 - 354
Target Start/End: Original strand, 27159063 - 27159185
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt 330  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| |||||||||||  |||||||||||||||||| |||||||    
T  27159063 attttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatctacatac--ggcacgtaaaatgagggatcaaaagt 27159160  T
Q  331 -ggaggaatctgaaattacaaggac 354  Q
     ||||||||||||||||||| ||||    
T  27159161 gggaggaatctgaaattacagggac 27159185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 351 - 535
Target Start/End: Complemental strand, 14411882 - 14411699
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||   ||||| ||||||||||||||| |||||||||||||||||    
T  14411882 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaatt 14411783  T
Q  451 acggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||   ||||| || ||||||           ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  14411782 acatagacaaaatataaatc--tttttttatacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttac 14411699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 227 - 402
Target Start/End: Original strand, 22571146 - 22571321
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| | || ||||||||||||||||||||||||||||||||| ||| |||||||| |  ||||| |   | | ||  |||| ||||||||||||||    
T  22571146 ttagattatatctctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatatgtgtgcgtgatacgtgaaatgagggaccaa 22571245  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagatt 402  Q
    ||| ||| |||| |||||||| | |||||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  22571246 aagcggatgaatatgaaattagagggaccaaatgtaggaggaacctgaaattacagggacgtaatttatgcagatt 22571321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 355 - 532
Target Start/End: Original strand, 27159154 - 27159327
Alignment:
Q  355 caaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacgg 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||   ||||| ||| ||||||||||||||||||||| | ||||||| |    
T  27159154 caaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaaattacag 27159253  T
Q  455 ggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatt 532  Q
    |||||| ||||||||            ||| |||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  27159254 ggacaaaatctaaat-----tttttttacaaggactaaaaccgaaattcgctaatattacaaggacgaaaagaggtatt 27159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 227 - 329
Target Start/End: Original strand, 30512356 - 30512459
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgt-aaaatgagggacca 325  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| |    
T  30512356 ttagatttggtccctgtaatttcagatttttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacga 30512455  T
Q  326 aaag 329  Q
    ||||    
T  30512456 aaag 30512459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 227 - 329
Target Start/End: Original strand, 30552696 - 30552799
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgt-aaaatgagggacca 325  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| |    
T  30552696 ttagatttggtccctgtaatttcagatttttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacga 30552795  T
Q  326 aaag 329  Q
    ||||    
T  30552796 aaag 30552799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 7126226 - 7126152
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || || ||||| |||||||||| ||||    
T  7126226 ttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 7126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 301
Target Start/End: Original strand, 14143901 - 14144044
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn--ttagattttgtccctgtaatttcatattctt 257  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||||||  |||           |||||||||||||||||||||||||||||||    
T  14143901 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattctt 14144000  T
Q  258 ccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||| ||| ||| || ||||| || ||||||| ||||    
T  14144001 ccacttttggtacctcatttcatcacgtcagtagaatctgcata 14144044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 24074372 - 24074446
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||| |||||||||||||||||||||||||||||||||  || || ||||| |||||||||| ||||    
T  24074372 ttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 24074446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 17762545 - 17762658
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggac 519  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||           ||||||||||||||| |||||||| |||| |||| ||||    
T  17762545 gagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatc--tttttttttacagggactaaaaccagaattcgctaatactacagggac 17762642  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  17762643 gaaaagaggtatttac 17762658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 23979164 - 23979277
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||           |||||||||||||||| ||||||| ||||||||| ||||    
T  23979164 gagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttt--acagggactaaaaccggaattcgctaatattacagggac 23979261  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  23979262 gaaaagaggtatttac 23979277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 6817430 - 6817388
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6817430 ttagattttgtccctgtaatttcatattcttccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 27159266 - 27159192
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||  || || ||||| |||||||||| ||||    
T  27159266 ttagattttgtccctgtaattttatattcttccatttttggtcccttctttcatcacgtcagcagaatctgcata 27159192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 535
Target Start/End: Complemental strand, 31799754 - 31799642
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||| ||||| |||||||| ||||||| | |||||    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttttttacagggactgaaaccggaattcgctaatattatagggacg 31799657  T
Q  521 aaaagaggtatttac 535  Q
    |||||||||||||||    
T  31799656 aaaagaggtatttac 31799642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 24837547 - 24837496
Alignment:
Q  162 gggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtc 24837496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 14411690 - 14411748
Alignment:
Q  155 aaatgtagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||| |||||||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  14411690 aaatttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 14411748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 17762355 - 17762425
Alignment:
Q  231 attttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||| |||||||||||| |||||||||||||||||||||  ||  | |||||||||||||||| ||||    
T  17762355 attttgttcctgtaatttcagattcttccacttttggtccctcctttaatcacgtaagcagaatctgcata 17762425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 29444875 - 29444949
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||||  || || ||||| |||||||||| ||||    
T  29444875 ttagattatgtccttgtaatttcatattcttctacttttggtccctcctttcatcacgtcagcagaatctgcata 29444949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 994055 - 994010
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  994055 ttagattttgtccctgtaattgcagattcttccacttttggtccct 994010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 6817237 - 6817125
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||| |||||||||||||||||||  |||||  |||||||||           |||||||||||||||| ||||| | ||||||||| ||||    
T  6817237 gagggaccaaaagtggaagaatctgaaattacatggacataatctaaatctttttttt---acagggactaaaaccggaattcactaatattacaaggac 6817141  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  6817140 gaaaagaggtatttac 6817125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 24651079 - 24651026
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||||||||||||||| |||||||||    
T  24651079 tagggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtc 24651026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 24837284 - 24837171
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| |||||||||  |||||| |||||||||           |||||||||||||||| ||||||| | ||||||| ||||    
T  24837284 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttt--acagggactaaaaccggaattcgctattattacagggac 24837187  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  24837186 gaaaagaggtatttac 24837171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 41001662 - 41001617
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||    
T  41001662 ttagattttgtccctataatttcagattcttccacttttggtccct 41001617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 535
Target Start/End: Original strand, 18336720 - 18336831
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacg 520  Q
    ||||| ||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||| ||||| |||||    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttttttacagggactaaaaccggaattcgctaat-ttacagggacg 18336816  T
Q  521 aaaagaggtatttac 535  Q
    |||||||||||||||    
T  18336817 aaaagaggtatttac 18336831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 20709521 - 20709478
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtcc 270  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  20709521 ttagattttgtccatgtaatttcatattcttccactttttgtcc 20709478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 4919105 - 4919056
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  4919105 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 4919056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 4919299 - 4919254
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||    
T  4919299 ttagattttgtccctgtaatttcagattcttctacttttgatccct 4919254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 6817241 - 6817200
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  6817241 aaatgagggaccaaaagtggaagaatctgaaattacatggac 6817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 422 - 532
Target Start/End: Complemental strand, 7126031 - 7125923
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaa-ccgaattcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||||||||||||  ||||||| |||||||||           ||||||||||||| | |||||||| ||||||||| | |||    
T  7126031 agggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatc---ttttttttacagggactaaaatcggaattcgctaatattacaggaacg 7125935  T
Q  521 aaaagaggtatt 532  Q
    ||||||||||||    
T  7125934 aaaagaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 7126297 - 7126244
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| ||||||| |  |||||||||||||||||||| |||||||||    
T  7126297 tagggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtc 7126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 18336537 - 18336582
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||    
T  18336537 ttagattttgtccctgtaatttcagattcttccgcttttgatccct 18336582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 20947056 - 20947097
Alignment:
Q  308 acgtaaaatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    |||| ||||||| |||||||||||||||||||||||||||||    
T  20947056 acgtgaaatgagtgaccaaaagtggaggaatctgaaattaca 20947097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 24837167 - 24837220
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||| ||||||||||| |||||||||    
T  24837167 tagggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtc 24837220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 24837478 - 24837433
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||    
T  24837478 ttagattttgtccctgtaatttcaaattcttctacttttgctccct 24837433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 422 - 532
Target Start/End: Complemental strand, 27159104 - 27158996
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacg 520  Q
    ||||||||||| ||||||||||||||||||| ||||||| || ||||||           || | ||||||||| | ||||||| |||||||||||||||    
T  27159104 agggaccaaaagtggaagaatctgaaattacagggacaaaatttaaatc---tttttttaactgagactaaaactgaaattcgctaatattacatggacg 27159008  T
Q  521 aaaagaggtatt 532  Q
    ||||||||||||    
T  27159007 aaaagaggtatt 27158996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 993865 - 993825
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  993865 aatgagggaccaaaagtggaagaatatgaaattacaaggac 993825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 14144165 - 14144213
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  14144165 agggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatc 14144213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 14411926 - 14411966
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  14411926 aatgagggaccaaacgtggaagaatctgaaattacaaggac 14411966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 17762282 - 17762334
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||| ||  |||||||||||||||||||| |||||||||    
T  17762282 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtc 17762334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 408
Target Start/End: Original strand, 20947069 - 20947124
Alignment:
Q  352 gaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttg 408  Q
    |||||||||||| |||||||||||||||||  || ||||||||||||||||| ||||    
T  20947069 gaccaaaagtgg-aggaatctgaaattacattgaggtaatttatgcagattctgttg 20947124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 24837287 - 24837247
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  24837287 aatgagggaccaaaagtggaagaatatgaaattacaaggac 24837247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 29445070 - 29445118
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| |||||||||||||||||||  |||||| |||||||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 29445118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 29445070 - 29445106
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||||||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggac 29445106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 30512405 - 30512361
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggaccaaa 358  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||    
T  30512405 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaa 30512361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 30552745 - 30552701
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggaccaaa 358  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||    
T  30552745 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaa 30552701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 31800019 - 31799882
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtcatgtnnnnnnnnn---ttagattttgtccctgtaatttcatattct 256  Q
    ||||| |||||| |||||||||  || ||||||||||||||||| ||||||||| |||            ||||||||||||| |||||||||| |||||    
T  31800019 tagggaaaatacctcttttcgtccctataatattagcgaattccggttttagtcctgtaaaaaaaaagatttagattttgtccatgtaatttcagattct 31799920  T
Q  257 tccacttttggtccctgattccaccacgtaagcagaat 294  Q
    ||| |||||| |||||  || || ||||| ||||||||    
T  31799919 tcctcttttgatccctcctttcatcacgtcagcagaat 31799882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 14411766 - 14411833
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaat 294  Q
    ||| ||||||||  |||||||||| |||||||||||||||||||||  || || ||||| ||||||||    
T  14411766 ttatattttgtctatgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaat 14411833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 295
Target Start/End: Complemental strand, 24651007 - 24650940
Alignment:
Q  228 tagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatc 295  Q
    |||||||| |||||||||||| | ||||||||||||||| |||||  || || ||||| |||||||||    
T  24651007 tagattttatccctgtaattttagattcttccacttttgatccctcctttcatcacgtcagcagaatc 24650940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 993806 - 993752
Alignment:
Q  482 acagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||||||||||| |||||||| |||||||||  |||||||||| ||||||||    
T  993806 acagggactaaaaccggaattcgctaatattacagagacgaaaagaagtatttac 993752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 20959400 - 20959358
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||| ||||||| |||| |||||||||||||    
T  20959400 ttagattttgtccctgcaatttcagattcctccacttttggtc 20959358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 41001729 - 41001679
Alignment:
Q  163 ggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||| | |||||||  |||||||||||||||||||| |||||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtc 41001679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 4919366 - 4919317
Alignment:
Q  163 ggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt 212  Q
    ||||||||| |||||||||  ||| |||||||||||||||| ||||||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagt 4919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 14144281 - 14144228
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||| ||||| ||||||||| |||||||||||| ||||||||  ||||||||    
T  14144281 tagggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtc 14144228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 347
Target Start/End: Original strand, 17762542 - 17762575
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaatta 347  Q
    |||||||||||||||||||| |||||||||||||    
T  17762542 aatgagggaccaaaagtggaagaatctgaaatta 17762575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 17762662 - 17762609
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  ||||| |||||||||||||  |||||||||    
T  17762662 tagggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtc 17762609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 20709327 - 20709278
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||| ||||||||| ||||||  |||||||||    
T  20709327 gagggaccaaaagtggaagaatttgaaattacagggacagaatctaaatc 20709278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 20709331 - 20709290
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  20709331 aaatgagggaccaaaagtggaagaatttgaaattacagggac 20709290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 23979160 - 23979201
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  23979160 aaatgagggaccaaaagtggaagaatttgaaattacagggac 23979201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 24074301 - 24074354
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||   ||||||||||||||||| | |||||||||    
T  24074301 tagggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtc 24074354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 24074561 - 24074602
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||| |||||||||||||||| |||| |||||||||||||||    
T  24074561 aaataagggaccaaaagtggaagaatatgaaattacaaggac 24074602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 28071759 - 28071796
Alignment:
Q  316 tgagggaccaaaagtggaggaatctgaaattacaagga 353  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  28071759 tgagggacctaaagtggaagaatctgaaattacaagga 28071796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 30512402 - 30512353
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||| ||||||||||||| ||||| | |||||||||    
T  30512402 gagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatc 30512353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 30552742 - 30552693
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||| ||||||||||||| ||||| | |||||||||    
T  30552742 gagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatc 30552693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 32233968 - 32234013
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| | |||| | |||||||||||||||||||||    
T  32233968 ttagattttgtccctatcatttgagattcttccacttttggtccct 32234013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 41424585 - 41424630
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| ||||||||| |||||| |||||||||||||| ||||||    
T  41424585 ttagattctgtccctgtcatttcagattcttccacttttagtccct 41424630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 4919108 - 4919068
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  4919108 aatgagggaccaaaagtggaagaatatgaaattacagggac 4919068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 7126113 - 7126077
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  7126113 gtccctgtaatttcaaattcctccacttttggtccct 7126077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 317 - 349
Target Start/End: Complemental strand, 14411812 - 14411780
Alignment:
Q  317 gagggaccaaaagtggaggaatctgaaattaca 349  Q
    ||||||||||||||||| |||||||||||||||    
T  14411812 gagggaccaaaagtggaagaatctgaaattaca 14411780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 14411929 - 14411977
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||||||||  |||||||||||||||||||  |||||| ||||||||    
T  14411929 gagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaaat 14411977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 18336638 - 18336674
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  18336638 gtccctgtaatttcagattcctccacttttggtccct 18336674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 20947053 - 20947017
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  20947053 aaatgagggactaaaaatggaggaatctgaaattaca 20947017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 22571196 - 22571160
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  22571196 aaatgagggaccaaaagtggaagaatatgaaattaca 22571160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 24074566 - 24074614
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| ||||||||| |||||||||  |||||| |||||||||    
T  24074566 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24074614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 27158990 - 27159042
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||| ||||| |||||||||   ||||||||||||||||| |||||||||||    
T  27158990 agggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtc 27159042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 27159104 - 27159068
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  27159104 agggaccaaaagtggaagaatctgaaattacagggac 27159068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 31799754 - 31799718
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggac 31799718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 533
Target Start/End: Original strand, 31799965 - 31800013
Alignment:
Q  486 ggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtattt 533  Q
    |||||||||||| ||||||| ||||||| | ||||||||||||||||||    
T  31799965 ggactaaaaccggaattcgctaatattatagggacgaaaagaggtattt 31800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 4e-92; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 30299540 - 30299297
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  30299540 ttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaa 30299441  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||| ||||  |||||| |||||| ||    
T  30299440 aagtggaggaatctgaaattacaagaactaaaagtgggaggaatctgaaattacagggacgtaatttatggagattctgttgacttgatgaaaggagaga 30299341  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||    
T  30299340 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 30299297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 227 - 470
Target Start/End: Original strand, 4907031 - 4907274
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| ||||||||||| |||||||||||||| ||    
T  4907031 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagccgaatctgcatacatggcatgtaaaatgagggactaa 4907130  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||   ||||| |||||||||    
T  4907131 aagtggatgaatctgaaattacagggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaaggaggga 4907230  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||    
T  4907231 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 4907274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 39711381 - 39711076
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  39711381 ttagattttgtccccgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcacgtaaaatgagggaccaa 39711282  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||   ||||  |||||||||    
T  39711281 aagtggaggaatccgaaattacagggaccaaaagcgggaggaatatgaaattacaaggacgtaatttatgcagattctgctgacgtgattaaaggaggga 39711182  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||| |||||||||  |||||| |||||||||           ||||||||||||||| |||||||| |||||||||  |||||||||    
T  39711181 ccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc---ttttttttacagggactaaaaccggaattcgctaatattaca-agacgaaaag 39711086  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  39711085 aggtatttac 39711076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 161 - 534
Target Start/End: Complemental strand, 17606685 - 17606307
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnntt-agattttgtccctgtaatttcatattcttc 258  Q
    ||||| ||||| |||||||||  |||||||||||||||||||| |||||||||  |||         || ||||||||||| |||||||||| |||||||    
T  17606685 agggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaagatttagattttgtccttgtaatttcagattcttc 17606586  T
Q  259 cacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaa 358  Q
    |||||||||||||| |||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  17606585 cacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaa 17606486  T
Q  359 agtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggggac 458  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| | ||   ||||| || |||||||||||| ||||||||| ||||||||| || ||    
T  17606485 agtgggaggaatatgaaattacagggacgtaatttatacagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaattacaggaac 17606386  T
Q  459 aacatctaaatc--nnnnnnnnnnnacagggactaaaa-ccgaattcgcaaatattacatggacgaaaagaggtattta 534  Q
    || |||||||||             ||||||||||||| | |||||||| ||||||||| |||||||||||||||||||    
T  17606385 aaaatctaaatctttttttttttttacagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 17606307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 39826119 - 39826422
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  39826119 ttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaa 39826218  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||| |||||||| |||||||||| |||||||||  | ||   ||||| ||    |||    
T  39826219 aagtggaggaatatgaaattacagggatcaaaagtgggaggaatctaaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaa----gga 39826314  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||           |||||||||||||||| ||||||| ||||||||||||||||||||    
T  39826315 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttatttacagggactaaaaccgaaattcgctaatattacatggacgaaaag 39826412  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  39826413 aggtatttac 39826422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 24467936 - 24467694
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| || ||||||| ||||||||||||||||||||| |||||||    
T  24467936 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggaccaa 24467838  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    | |||||| |||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||||||||   ||  |||||| |||||||||    
T  24467837 atgtggagtaatctgaaattacagggaccaaaagtgggaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggaggga 24467738  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||    
T  24467737 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 24467694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 235 - 535
Target Start/End: Original strand, 52058088 - 52058384
Alignment:
Q  235 tgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggag 334  Q
    |||||||||||||||| ||||||||||||||||||||| ||| |||||| | |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  52058088 tgtccctgtaatttcagattcttccacttttggtccctcatttcaccacatcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggag 52058187  T
Q  335 gaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaat 434  Q
     ||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   ||   ||||| ||||||||||||||| |    
T  52058188 taatatgaaattacaaggaccaaaagtgggaggaatctgaaatcatagggacgtaatttatgcagattc---tgacgtgatgaaaggagggaccaaaagt 52058284  T
Q  435 ggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtattt 533  Q
    |||||||||||||||||| ||||||  |||||||||           ||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||    
T  52058285 ggaagaatctgaaattacagggacataatctaaatc--tttttttctacaggaactaaaaccaaaattcgctaatattacagggacgaaaagaggtattt 52058382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 227 - 532
Target Start/End: Complemental strand, 48072270 - 48071966
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||| ||| |||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  48072270 ttagattatgtccctgtaatttcatattcttccacttttgggtcctcatttcaccacgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaa 48072171  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| |||| | ||   ||||| |||||||||    
T  48072170 aagtggaggaatctgaaattacagggatcaaaagtgggaggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 48072071  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
     ||||| ||||| ||| ||||||||| ||||||| |||||||||           ||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  48072070 gcaaaagtggaataatatgaaattacagggacaaaatctaaatc--ttttttattacaggaactaaaaccagaattcgctaatattacatgaacgaaaag 48071973  T
Q  526 aggtatt 532  Q
    || ||||    
T  48071972 agatatt 48071966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 18462593 - 18462288
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||| ||||||||| |||||||||||||||||| || ||| |||||||| | |||||||| ||||||||||||| ||||||| |||||||    
T  18462593 ttagattttgtccccgtaatttcagattcttccacttttggtctctcatttcaccacgtcaacagaatctgcatacatggcacgcaaaatga-ggaccaa 18462495  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    | |||||| ||| |||||||| | |||||||||||||||||||| ||||||||||  ||||||||||||||||||||   ||  |||||| |||||||||    
T  18462494 acgtggagtaatatgaaattatagggaccaaaagtgggaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggaggga 18462395  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaag 525  Q
    |||||||||||||||||||||||||| ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  18462394 ccaaaaatggaagaatctgaaattacagggacaaaatctaaatc---ttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaag 18462298  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  18462297 aggtatttac 18462288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 161 - 535
Target Start/End: Complemental strand, 29696936 - 29696567
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn--ttagattttgtccctgtaatttcatattctt 257  Q
    ||||||||||| ||||||||||  ||||||||||||||||||| |||||||||| |||           ||||||||||||| |||||||||| ||||||    
T  29696936 agggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaattagattttgtccatgtaatttcagattctt 29696837  T
Q  258 ccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaa 357  Q
    ||||||||||||||| ||||||||||||||||||||||| |||     ||||||||||||||||||||||||||||||||||||||| |||| ||||| |    
T  29696836 ccacttttggtccctcattccaccacgtaagcagaatctgcat-----gcacgtaaaatgagggaccaaaagtggaggaatctgaaaatacagggacc-a 29696743  T
Q  358 aagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacgggga 457  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||| |  |   ||||| |||||| ||| |||| ||||||||| ||||||||||||||    
T  29696742 aagtgggaggaatatgaaattatagggacataatttatgcagattctgccgatgtgatgaaaggagtgacaaaaagtggaagaatatgaaattacgggga 29696643  T
Q  458 caacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||| |||||||||           |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  29696642 caaaatctaaatc---ttttttttacagagactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttac 29696567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 227 - 452
Target Start/End: Complemental strand, 13230040 - 13229816
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||| | || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  13230040 ttagattttgcctctttaatttcatcttcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaa 13229941  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||||| |||||| ||    
T  13229940 aagtggaggaatctgaaattac-aggaccaaaagtgagaggaatctgaaattacagggacgtaatttatgcagattatgttgacttgatgaaaggagtga 13229842  T
Q  427 ccaaaaatggaagaatctgaaattac 452  Q
     ||||| ||||||||| |||||||||    
T  13229841 tcaaaagtggaagaatatgaaattac 13229816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 227 - 532
Target Start/End: Original strand, 33628759 - 33629063
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||| |||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  33628759 ttagattttgtccccgtaatttcagattctttcacttttggtccctcattccaccacataagcagaatttgcatacatggcacgtaaaatgagggaccaa 33628858  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||| |||||| | ||   ||||  |||||||||    
T  33628859 aagtagaggaatctgaaattacagggaccaaaagcgggaggaatttgaaattacagggacataatttatgtagattctgctgacgtgattaaaggaggga 33628958  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||| ||| || |            |||||||||||||||| ||||||| ||||||||| |||| |||||    
T  33628959 ccaaaagtggaagaatctgaaattacagggacaaaatcaaatt--ttttttttttacagggactaaaaccggaattcgctaatattacagggacaaaaag 33629056  T
Q  526 aggtatt 532  Q
    |||||||    
T  33629057 aggtatt 33629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 227 - 458
Target Start/End: Complemental strand, 20995977 - 20995747
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  20995977 ttagattttgtctctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaa-tgagggaccaa 20995879  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||   ||||| ||| |||||    
T  20995878 aagtggagaaatttgaaattacagggacgaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaaggga 20995779  T
Q  427 ccaaaaatggaagaatctgaaattacggggac 458  Q
    |||||| || |||||| | ||||||| |||||    
T  20995778 ccaaaagtgaaagaatataaaattacagggac 20995747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 227 - 535
Target Start/End: Original strand, 39970715 - 39971022
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  39970715 ttagattttgtctatgtaatttcagattcttccacttttggtccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaa 39970814  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||| ||||| |||||||  ||||||||| ||||| | ||   ||||| ||| |||||    
T  39970815 aagtggatgaatctgaaattac-atgaccaaaagtgggaggaatctaaaatttcagggacacaatttatgcggattctgctgacgtgatgaaagaaggga 39970913  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| |||||| |||| ||||||| ||||||| |||||||||           |||||||||||||||| ||||||  ||||||||||||||||||||    
T  39970914 ccaaaagtggaaggatctaaaattacagggacaaaatctaaatc-ttttttttttacagggactaaaaccgaaattcgttaatattacatggacgaaaag 39971012  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  39971013 aggtatttac 39971022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 227 - 451
Target Start/End: Original strand, 42510083 - 42510307
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||| | |||||||||| |||||||||||||| ||||||||||||||    
T  42510083 ttagattttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacatcagcagaatctgcatacatggcacgtgaaatgagggaccaa 42510182  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||| | ||   ||||| || ||||||    
T  42510183 aagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaggggtgtaatttatgcagattctgctgacgtgatgaaatgaggga 42510282  T
Q  427 ccaaaaatggaagaatctgaaatta 451  Q
      | || ||||||||||||||||||    
T  42510283 atacaagtggaagaatctgaaatta 42510307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 230 - 470
Target Start/End: Complemental strand, 43539653 - 43539413
Alignment:
Q  230 gattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaag 329  Q
    |||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||| ||| |||||| |||||||| |||||||||||||| ||||||||    
T  43539653 gattttgtccatgtaatttcaaattcttccagttttggtcccttattccaccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaag 43539554  T
Q  330 tggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggacca 429  Q
    ||||||||| |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||   ||||| ||||||||||||    
T  43539553 tggaggaatttgaaattacagggagcaaaagtgggaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 43539454  T
Q  430 aaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||| ||||| ||| | ||||||| ||||||| |||||||||    
T  43539453 aaagtggaacaatataaaattacagggacaaaatctaaatc 43539413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 160 - 460
Target Start/End: Original strand, 33628688 - 33628992
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagt-catgt---nnnnnnnnnttagattttgtccctgtaatttcatattc 255  Q
    |||||||||||| |||||||||  |||||||||||||||||||  |||||||| |  ||            |||||||||||||| ||||||||| ||||    
T  33628688 tagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattc 33628787  T
Q  256 ttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacc 355  Q
    || |||||||||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  33628788 tttcacttttggtccctcattccaccacataagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggacc 33628887  T
Q  356 aaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaattacggg 455  Q
    ||||| ||||||||| ||||||||||||||| ||||||||| |||||| | ||   ||||  ||||||||||||||| ||||||||||||||||||| ||    
T  33628888 aaaagcgggaggaatttgaaattacagggacataatttatgtagattctgctgacgtgattaaaggagggaccaaaagtggaagaatctgaaattacagg 33628987  T
Q  456 gacaa 460  Q
    |||||    
T  33628988 gacaa 33628992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 8293116 - 8292870
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggacca- 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| ||||||||||| | |||||||||||| |     
T  8293116 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccatgtcagccgaatctgcatacatggcatgaaaaatgagggactaa 8293017  T
Q  326 --aaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggag 423  Q
      ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||   ||||| || |||    
T  8293016 ttaaagtggaggaatctaaaattacatggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaagag 8292917  T
Q  424 ggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    | ||||||| ||||||||| ||||||| | ||||||| |||||||||    
T  8292916 gaaccaaaagtggaagaatatgaaatttcagggacaaaatctaaatc 8292870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 227 - 349
Target Start/End: Original strand, 34749206 - 34749328
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  34749206 ttagattttgtccccgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcatgtaaaatgagggaccaa 34749305  T
Q  327 aagtggaggaatctgaaattaca 349  Q
    |||||||||||||||||||||||    
T  34749306 aagtggaggaatctgaaattaca 34749328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 228 - 402
Target Start/End: Original strand, 7473862 - 7474032
Alignment:
Q  228 tagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaa 327  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||| |  ||||||| |||||||||||||| |||||| ||| ||||    
T  7473862 tagattatgtctctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatctgcatacatggcacgtgaaatgatggatcaaa 7473961  T
Q  328 agtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagatt 402  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||  |||||||||||||||    
T  7473962 agtggaggaatctgaaattacaaggaccaaaagtgggagga--ctgaaatt--agggatataatttatgcagatt 7474032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 34749299 - 34749417
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| | ||   ||||  ||||||| ||||||| |||||||||||||||||    
T  34749299 ggaccaaaagtgg-aggaatctgaaattacagggatgtaatttatgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatctgaaatt 34749397  T
Q  451 acggggacaacatctaaatc 470  Q
    || |||| || |||||||||    
T  34749398 acagggataaaatctaaatc 34749417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 290 - 395
Target Start/End: Original strand, 215044 - 215149
Alignment:
Q  290 agaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgta 389  Q
    ||||||| |||| ||| ||||| ||||||  |||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||||||||||  ||||||    
T  215044 agaatctgcatatatgacacgtgaaatgaatgaccaaaagtggaggaatcttaaattacacggaccgaaagtgagagaaatctgaaattacaatgacgta 215143  T
Q  390 atttat 395  Q
    ||||||    
T  215144 atttat 215149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 17606377 - 17606446
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatct 296  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||| || ||||| ||||||||||    
T  17606377 ttagattttgttcctgtaatttcatattcttccacttttggtccctcatttcatcacgtcagcagaatct 17606446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 39711335 - 39711448
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||    
T  39711335 gagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttt--acagggactaaaaccagaattcgctaatattacagggac 39711432  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  39711433 gaaaagaggtatttac 39711448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 272
Target Start/End: Original strand, 24467628 - 24467742
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn--ttagattttgtccctgtaatttcatattctt 257  Q
    |||||||||||||||||||||  ||||||||||||||||||||| ||||||||  |||           |||||||||||||||||||||||| ||||||    
T  24467628 agggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattctt 24467727  T
Q  258 ccacttttggtccct 272  Q
    |||||||||||||||    
T  24467728 ccacttttggtccct 24467742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 16294256 - 16294182
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| |||  |||| || |||||||||||||||    
T  16294256 ttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaaccatgtcagcagaatctacata 16294182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 18342314 - 18342261
Alignment:
Q  241 tgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaat 294  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  18342314 tgtaatttcatattcttccacttttagtccctcattccaccacgtaagcagaat 18342261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 33628805 - 33628692
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggac 519  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||           || |||||||||||| |||||||| ||||||||| ||||    
T  33628805 gagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaaatc--tttttttttacggggactaaaaccagaattcgctaatattacagggac 33628708  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  33628707 gaaaagaggtatttac 33628692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 33628996 - 33628925
Alignment:
Q  230 gattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||  | ||||| |||||||||||||||    
T  33628996 gattttgtccctgtaatttcagattcttccacttttggtccctcctttaatcacgtcagcagaatctacata 33628925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 4907271 - 4907197
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  || || ||||| || ||||||| ||||    
T  4907271 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagtagaatctgcata 4907197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 8292873 - 8292947
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||  || || ||||| |||||||||| ||||    
T  8292873 ttagattttgtccctgaaatttcatattcttccacttttggttcctcttttcatcacgtcagcagaatctgcata 8292947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 30299300 - 30299342
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30299300 ttagattttgtccctgtaatttcatattcttccacttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 39711141 - 39711215
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  ||  | ||||| |||||||||| ||||    
T  39711141 ttagattttgtccttgtaatttcatattcttccacttttggtccctcctttaatcacgtcagcagaatctgcata 39711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 43539416 - 43539490
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||  || || ||||| |||||||||| ||||    
T  43539416 ttagattttgtccctgtaattttatattgttccacttttggtccctcctttcatcacgtcagcagaatctgcata 43539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 532
Target Start/End: Original strand, 17606572 - 17606679
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacg 520  Q
    ||||||||||| |||||||||||||||||||  |||||| |||||||||           |||||||||||||||| ||||||| ||||||||| |||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatcttttttt----acagggactaaaaccggaattcgctaatattacagggacg 17606667  T
Q  521 aaaagaggtatt 532  Q
    ||||||||||||    
T  17606668 aaaagaggtatt 17606679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 39826165 - 39826052
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccgaa-ttcgcaaatattacatggac 519  Q
    |||||| ||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||||||| |||| ||||| ||||||| ||||||    
T  39826165 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttt--acagggactaaaatcgaaattcgctaatattatatggac 39826068  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  39826067 gaaaagaggtatttac 39826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 272
Target Start/End: Original strand, 18462285 - 18462399
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtca-tgtnnnnnnnnn--ttagattttgtccctgtaatttcatattctt 257  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||||||  |||           |||||||||||||||||||||||| ||||||    
T  18462285 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattctt 18462384  T
Q  258 ccacttttggtccct 272  Q
    ||| |||||||||||    
T  18462385 ccatttttggtccct 18462399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 30252207 - 30252152
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccacca 282  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||||    
T  30252207 ttagattttgtccccgtaatttcatattcttccatttttgatccctcattccacca 30252152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 39826355 - 39826312
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtcc 270  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  39826355 ttagattttgtccctgtaatttcagattcttccacttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 4907077 - 4906964
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaac-cgaattcgcaaatattacatggac 519  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||           ||||||||||||||  |||||| | ||||||||| ||||    
T  4907077 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc--attttttttacagggactaaaactagaattcactaatattacagggac 4906980  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  4906979 gaaaagaggtatttac 4906964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 470
Target Start/End: Original strand, 18462551 - 18462596
Alignment:
Q  425 gaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||    
T  18462551 gaccaaaagtggaagaatctgaaattacggggacaaaatctaaatc 18462596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 24467890 - 24467939
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  24467890 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 24467939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 30252161 - 30252210
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  30252161 gagggatcaaaaatggaagaatatgaaattacggggacaaaatctaaatc 30252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 34749252 - 34749203
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  34749252 gagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatc 34749203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 48072030 - 48072075
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  48072030 ttagattttgtccctgtaatttcatattattccacttttgctccct 48072075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 52058317 - 52058272
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  52058317 ttagattatgtccctgtaatttcagattcttccacttttggtccct 52058272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 39970954 - 39970886
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatc 295  Q
    |||||||||||||||||||||| | || ||||||||||||||||||  || || ||||| |||||||||    
T  39970954 ttagattttgtccctgtaattttagatccttccacttttggtcccttctttcatcacgtcagcagaatc 39970886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 469
Target Start/End: Original strand, 16294140 - 16294258
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    |||||||||||||  ||||||  ||||||||||||||||||||||| |||||| | ||   || |  ||  ||||||||||| |||| |||| |||||||    
T  16294140 ggaccaaaagtggatggaatcataaattacagggacgtaatttatgtagattctgctgacatggttaaataagggaccaaaagtggaggaatatgaaatt 16294239  T
Q  451 acggggacaacatctaaat 469  Q
    ||  |||||| ||||||||    
T  16294240 acaaggacaaaatctaaat 16294258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 18342339 - 18342393
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||    
T  18342339 acagggactaaaaccgaaattcgctaatattacagggacgaaaaaaggtatttac 18342393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 29696633 - 29696671
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccactttt 265  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  29696633 ttagattttgtccccgtaatttcatattcttccactttt 29696671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 34749414 - 34749340
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||| |||||||||||||| ||||||||||||||||| |||  ||  | ||||| |||||||||| ||||    
T  34749414 ttagattttatccctgtaatttcagattcttccacttttggtacctcctttaatcacgtcagcagaatctgcata 34749340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 8293070 - 8293119
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  8293070 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 8293119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 16294206 - 16294247
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  16294206 aaataagggaccaaaagtggaggaatatgaaattacaaggac 16294247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 20995696 - 20995749
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| ||||||| |  |||||||||||||||||||| |||||||||    
T  20995696 tagggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtc 20995749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 20995747 - 20995812
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||| |||||||| ||||||||||||||  || || ||||| |||||||||| ||||    
T  20995747 gtccctgtaattttatattctttcacttttggtcccttctttcatcacgtcagcagaatctgcata 20995812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 24467886 - 24467927
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  24467886 aaatgagggaccaaaagtggaagaatctgaaattacagggac 24467927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 29696563 - 29696616
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||||||||||||| | |||||||||    
T  29696563 tagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 29696616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 30299494 - 30299543
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |||||||||    
T  30299494 gagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatc 30299543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 48072341 - 48072288
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| ||||||||| | ||||||||||| ||||||| |||||||||    
T  48072341 tagggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtc 48072288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 52058130 - 52058089
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  52058130 aaatgagggaccaaaagtggaagaatctgaaattacagggac 52058089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 4906961 - 4907013
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  |||||||||||| |||||| ||||||||||    
T  4906961 agggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtc 4907013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 17606572 - 17606608
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggac 17606608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 29696818 - 29696858
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  29696818 aatgagggaccaaaagtggaagaatctgaaattacatggac 29696858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 39711451 - 39711399
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  |||||||||||||||||||  |||||||||    
T  39711451 agggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtc 39711399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 17606296 - 17606355
Alignment:
Q  154 taaatgtagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||| |||| ||||||| |||||||||  ||||||||||||||||||||  ||||||||    
T  17606296 taaatttaggataaatacctcttttcgtccctgtaatattagcgaattccgattttagtc 17606355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 349
Target Start/End: Complemental strand, 39970764 - 39970729
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    |||||||||||||||||||| |||||||||||||||    
T  39970764 aatgagggaccaaaagtggaagaatctgaaattaca 39970729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 20995754 - 20995700
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||||| ||||||| |||||||||  || ||||||||||||||||    
T  20995754 acagggactaaaaccggaattcgctaatattacagagatgaaaagaggtatttac 20995700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 467
Target Start/End: Original strand, 29696821 - 29696867
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaa 467  Q
    |||||||||||| |||||||||||||||||||  |||||| ||||||    
T  29696821 gagggaccaaaagtggaagaatctgaaattacatggacaaaatctaa 29696867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 29696879 - 29696933
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||| ||||||||||| ||||||| ||||||||||  ||||||||||||||||||    
T  29696879 acagtgactaaaaccggaattcgctaatattacataaacgaaaagaggtatttac 29696933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 535
Target Start/End: Complemental strand, 30299284 - 30299234
Alignment:
Q  486 ggactaaaaccgaa-ttcgcaaatattacatggacgaaaagaggtatttac 535  Q
    ||||||||| |||| ||||| ||||||||| ||||||||||||||||||||    
T  30299284 ggactaaaatcgaagttcgctaatattacagggacgaaaagaggtatttac 30299234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 459
Target Start/End: Complemental strand, 52058126 - 52058088
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggaca 459  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  52058126 gagggaccaaaagtggaagaatctgaaattacagggaca 52058088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 4907318 - 4907289
Alignment:
Q  184 ctgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||||||||||||||||||||||    
T  4907318 ctgtaatattagcgaattccagttttagtc 4907289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 13229803 - 13229840
Alignment:
Q  229 agattttgtccctgtaatttcatattcttccacttttg 266  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  13229803 agattttgtgcttgtaatttcatattcttccacttttg 13229840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 17501993 - 17502030
Alignment:
Q  317 gagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  17501993 gagggactaaaagtggaggaatctgaaattacagggac 17502030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 17502039 - 17501994
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||||||||| |||| ||||||||| ||||||    
T  17502039 ttagattctgtccctgtaatttcagattcctccacttttagtccct 17501994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 34749137 - 34749178
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattc 202  Q
    ||||||||||||||||||| |  |||||||||||||||||||    
T  34749137 agggtaaatacatcttttcatccctgtaatattagcgaattc 34749178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 535
Target Start/End: Complemental strand, 39970676 - 39970647
Alignment:
Q  506 aatattacatggacgaaaagaggtatttac 535  Q
    ||||||||||||||||||||||||||||||    
T  39970676 aatattacatggacgaaaagaggtatttac 39970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 39970761 - 39970712
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| |||||||||||||||||||   ||||| |||||||||    
T  39970761 gagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaatc 39970712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 4907080 - 4907040
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  4907080 aatgagggaccaaaagtggaagaatatgaaattacagggac 4907040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 7473911 - 7473875
Alignment:
Q  313 aaatgagggaccaaaagtggaggaatctgaaattaca 349  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  7473911 aaatgagggaccaaaagtggaagaatatgaaattaca 7473875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 8293067 - 8293107
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  8293067 aatgagggaccaaaagtggaagaatatgaaattacagggac 8293107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 8293187 - 8293135
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| |||||||||  || |||||||| ||||||| ||||||||||    
T  8293187 agggtaaatacctcttttcgtccctataatattaacgaattctagttttagtc 8293135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 17606490 - 17606526
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  17606490 gtccctgtaatttcaaattcctccacttttggtccct 17606526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 20995932 - 20995980
Alignment:
Q  422 agggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    ||||||||||| ||||||||| ||||||||| | ||||| |||||||||    
T  20995932 agggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatc 20995980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 30299491 - 30299531
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||||| |||||||| ||||    
T  30299491 aatgagggaccaaaagtggaagaatctaaaattacagggac 30299531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 33629069 - 33629017
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||| ||||| |||||| ||  |||||||||||||||||||| |||||||||    
T  33629069 agggttaatacctctttttgtccctgtaatattagcgaattccggttttagtc 33629017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 39826168 - 39826128
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  39826168 aatgagggatcaaaagtggaagaatctgaaattacagggac 39826128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 42510210 - 42510174
Alignment:
Q  236 gtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  42510210 gtccctgtaatttcagattcctccacttttggtccct 42510174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 535
Target Start/End: Complemental strand, 52058061 - 52058013
Alignment:
Q  488 actaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||| ||||||  ||||||||| ||||||||||||||||||||    
T  52058061 actaaaaccggaattcgttaatattacaaggacgaaaagaggtatttac 52058013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 52058387 - 52058347
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaatt 201  Q
    ||||||||||| |||||||||  ||||||||||||||||||    
T  52058387 agggtaaatacctcttttcgtccctgtaatattagcgaatt 52058347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 157; Significance: 3e-83; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 8631 - 8327
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||| |||||    
T  8631 ttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagg-accaa 8533  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||   ||||| |||||| ||    
T  8532 aaatggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggagaga 8433  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| || |||||||||  ||||| ||||||| |||||||||           || ||||||||||||| ||||||| ||||||||| ||||||||||    
T  8432 ccaaaagtgaaagaatctg--attactgggacaaaatctaaatc--tttttatttacggggactaaaaccgaaattcgctaatattacagggacgaaaag 8337  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  8336 aggtatttac 8327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 8323 - 8376
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||||||  |||||||||||||||||| | |||||||||    
T  8323 tagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 8376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 8585 - 8634
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |||||||||    
T  8585 gagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatc 8634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 8582 - 8622
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||||| |||||||| ||||    
T  8582 aatgagggaccaaaagtggaagaatctaaaattacagggac 8622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 156; Significance: 1e-82; HSPs: 5)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 227 - 535
Target Start/End: Complemental strand, 1719 - 1413
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| |   |||||| | |||||||||| |||||||||||||||||||||||||||||    
T  1719 ttagattatgtccttgtaatttcagattcttccacttttggtccctcacatcaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaa 1620  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| | ||   ||||| |||||||||    
T  1619 aagtggagtaatctgaaattacaaggaccaaaagtgggaggaatctgaaattatagggacgtaatttatgtagattctgctgacgtgatgaaaggaggga 1520  T
Q  427 ccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaaccg-aattcgcaaatattacatggacgaaaag 525  Q
    |||||| ||||||||||||||||||| ||||||  |||||||||           ||||||||||||| || ||||||||||||||||  || |||||||    
T  1519 ccaaaagtggaagaatctgaaattacagggacataatctaaatc---ttttttttacagggactaaaatcgaaattcgcaaatattaccgggtcgaaaag 1423  T
Q  526 aggtatttac 535  Q
    ||||||||||    
T  1422 aggtatttac 1413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 1479 - 1553
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||  || || ||||| |||||||||||||||    
T  1479 ttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatctacata 1553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 1672 - 1710
Alignment:
Q  316 tgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1672 tgagggaccaaaagtggaagaatctgaaattacaaggac 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 1730 - 1782
Alignment:
Q  484 agggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||| ||||||  ||||||||| ||||||||||||| ||||||    
T  1730 agggactaaaaccggaattcgttaatattacagggacgaaaagagggatttac 1782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 1785 - 1733
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||| | |||||||||  ||||||||||| |||||||| |||||||||    
T  1785 agggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtc 1733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 134; Significance: 2e-69; HSPs: 4)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 227 - 452
Target Start/End: Original strand, 3938 - 4163
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||| |||||||||||||||| ||||||||||| |||||| || ||| ||||| || |||||||||| || |||||||| |||||||||||||||||    
T  3938 ttagattatgtccctgtaatttcaaattcttccactgttggtcgctcatttcaccatgtcagcagaatctgcacacatggcaagtaaaatgagggaccaa 4037  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||| | ||   ||||| |||||||||    
T  4038 aagtggaggaatatgaaattacagtgaccaaaagtgggaggaatctgaaattacagagacataatttatgcagattctgctgacgtgatgaaaggaggga 4137  T
Q  427 ccaaaaatggaagaatctgaaattac 452  Q
    ||||||||| ||||||||||||||||    
T  4138 ccaaaaatgaaagaatctgaaattac 4163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 3925 - 3871
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||    
T  3925 acagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttac 3871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 3867 - 3920
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||  |||||||||  |||||||||||||||||||| |||||||||    
T  3867 tagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtc 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 4061 - 4029
Alignment:
Q  240 ctgtaatttcatattcttccacttttggtccct 272  Q
    |||||||||||||||| ||||||||||||||||    
T  4061 ctgtaatttcatattcctccacttttggtccct 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 119; Significance: 2e-60; HSPs: 3)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 227 - 453
Target Start/End: Original strand, 289 - 514
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    ||||||||| ||||  |||||||| ||||||||||||||||||||| |||||||||| |||||||||| | ||||||||| |||||||||||||||||||    
T  289 ttagattttctccccataatttcagattcttccacttttggtccctcattccaccacataagcagaatttgcatacatggtacgtaaaatgagggaccaa 388  T
Q  327 aagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggaggga 426  Q
    |||| |||||||||||||||||| |||||||||  ||||||||||||||||||||  |||||||||||||||||||| | ||   ||||  ||||||  |    
T  389 aagtagaggaatctgaaattacagggaccaaaatcgggaggaatctgaaattaca-agacgtaatttatgcagattctgctgatgtgattaaaggagata 487  T
Q  427 ccaaaaatggaagaatctgaaattacg 453  Q
    |||||| ||||| ||||||||||||||    
T  488 ccaaaagtggaataatctgaaattacg 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 335 - 286
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatc 470  Q
    |||||||||||| |||||||||||||||||| ||||| || |||||||||    
T  335 gagggaccaaaagtggaagaatctgaaattatggggagaaaatctaaatc 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 347
Target Start/End: Complemental strand, 338 - 305
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaatta 347  Q
    |||||||||||||||||||| |||||||||||||    
T  338 aatgagggaccaaaagtggaagaatctgaaatta 305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 94; Significance: 1e-45; HSPs: 4)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 359
Target Start/End: Complemental strand, 5057 - 4924
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 326  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5057 ttagatttagtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaa 4958  T
Q  327 aagt-ggaggaatctgaaattacaaggaccaaaa 359  Q
    |||| |||| ||| |||||||||| |||| ||||    
T  4957 aagtgggagaaatatgaaattacatggactaaaa 4924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 4878 - 4931
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||| ||| |||||||||||||||||| | |||||||||    
T  4878 tagggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtc 4931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 5008 - 5048
Alignment:
Q  314 aatgagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||| |||||| |||||||| ||||    
T  5008 aatgagggaccaaaagtggaagaatctaaaattacagggac 5048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 5011 - 5059
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaat 469  Q
    |||||||||||| ||||||||||| ||||||| ||||| | ||||||||    
T  5011 gagggaccaaaagtggaagaatctaaaattacagggactaaatctaaat 5059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 83; Significance: 5e-39; HSPs: 5)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 227 - 353
Target Start/End: Original strand, 7295 - 7426
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatcta----catacatggcacgtaaaatgaggga 322  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||     ||||||||| |||||||||||||||    
T  7295 ttagattttgtccctgtaatttcatattcttccactttcggtccctcattccaccacggaagcaaaatctgactgcatacatggtacgtaaaatgaggga 7394  T
Q  323 ccaaaagtgg-aggaatctgaaattacaagga 353  Q
    |||||||||| |||||||||||||||||||||    
T  7395 ccaaaagtggtaggaatctgaaattacaagga 7426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 351 - 535
Target Start/End: Original strand, 7392 - 7576
Alignment:
Q  351 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagggaccaaaaatggaagaatctgaaatt 450  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  ||||  |||||| |||||  |||||||| | |||||||||||||||    
T  7392 ggaccaaaagtggtaggaatctgaaattacaaggatgtaatttatgcagattttgttgacttgatgaaaggatagaccaaaagtagaagaatctgaaatt 7491  T
Q  451 acggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    || ||||||| |||||||||           ||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||    
T  7492 acagggacaaaatctaaatc-ttttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaataggtatttac 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 7508 - 7466
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtc 269  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  7508 ttagattttgtccctgtaatttcagattcttctacttttggtc 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 535
Target Start/End: Complemental strand, 7341 - 7228
Alignment:
Q  421 gagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatattacatggac 519  Q
    |||||||| ||| ||||||||| ||||||||| ||||||| |||||||||           ||||| ||||| ||| |||||||| ||||||||| ||||    
T  7341 gagggaccgaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttt--acaggaactaacaccagaattcgctaatattacaaggac 7244  T
Q  520 gaaaagaggtatttac 535  Q
    ||||||||||||||||    
T  7243 gaaaagaggtatttac 7228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 7579 - 7527
Alignment:
Q  161 agggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||||||||| | |||||||  |||||||||||||||||||| |||||||||    
T  7579 agggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtc 7527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 325 - 465
Target Start/End: Original strand, 15800 - 15939
Alignment:
Q  325 aaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattcagttgtgttgatgtaaggagg 424  Q
    |||||| ||||||| ||||||||||  ||||||||||||||||||||||||||||||| |   |||||||||||||||| | ||   ||||| ||||||     
T  15800 aaaagttgaggaatttgaaattacagagaccaaaagtgggaggaatctgaaattacagcg-tataatttatgcagattctgctgacgtgatgaaaggaga 15898  T
Q  425 gaccaaaaatggaagaatctgaaattacggggacaacatct 465  Q
    |||||||| || |||||| ||||||||| ||||||| ||||    
T  15899 gaccaaaagtgaaagaatatgaaattacagggacaaaatct 15939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 15939 - 15867
Alignment:
Q  229 agattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacata 301  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||  || || ||||| |||||||||| ||||    
T  15939 agattttgtccctgtaatttcatattctttcacttttggtctctcctttcatcacgtcagcagaatctgcata 15867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 15950 - 16004
Alignment:
Q  482 acagggactaaaaccg-aattcgcaaatattacatggacgaaaagaggtatttac 535  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  15950 acagagactaaaaccggaattcgctaatattacatggacgaaaagagatatttac 16004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 16008 - 15955
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||  |||||||||   ||||||||||||||||||| |||||||||    
T  16008 tagggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtc 15955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 44; Significance: 9e-16; HSPs: 3)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 12291 - 12216
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccctgattccaccacgtaagcagaatctacatac 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |  || || ||||| |||||||||| |||||    
T  12291 ttagattttgtccctgtaatttcagattcttccacttttggtccatcctttcatcacgtcagcagaatctgcatac 12216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 532
Target Start/End: Original strand, 12236 - 12355
Alignment:
Q  412 tgatgtaaggagggaccaaaaatggaagaatctgaaattacggggacaacatctaaatcnnnnnnnnnnnacagggactaaaacc-gaattcgcaaatat 510  Q
    ||||| ||||| ||||||||| ||||||||||||||||||| ||||||| |||||||||           | ||||||||||||| |||||||| |||||    
T  12236 tgatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--tttttttttatagggactaaaaccggaattcgctaatat 12333  T
Q  511 tacatggacgaaaagaggtatt 532  Q
    |||| |||||||||||||||||    
T  12334 tacagggacgaaaagaggtatt 12355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 12355 - 12309
Alignment:
Q  167 aatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    ||||| |||||||||  |||||||||||||||||||| |||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtc 12309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 34; Significance: 0.0000000008; HSPs: 5)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 4665 - 4718
Alignment:
Q  160 tagggtaaatacatcttttcgttactgtaatattagcgaattccagttttagtc 213  Q
    |||||||||||| |||||| ||  ||| ||||||||||||||||||||||||||    
T  4665 tagggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtc 4718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 4736 - 4781
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||||||||| |||| ||||||||||||||||    
T  4736 ttagattctgtccctgtaatttcagattcctccacttttggtccct 4781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 4781 - 4745
Alignment:
Q  318 agggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||||||||||||||||||||||||||||| ||||    
T  4781 agggaccaaaagtggaggaatctgaaattacagggac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 5941 - 5978
Alignment:
Q  317 gagggaccaaaagtggaggaatctgaaattacaaggac 354  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  5941 gagggatcaaaagtggaggaatctgaaattacagggac 5978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 5987 - 5942
Alignment:
Q  227 ttagattttgtccctgtaatttcatattcttccacttttggtccct 272  Q
    ||||||| |||||||||||||||| |||| |||||||||| |||||    
T  5987 ttagattctgtccctgtaatttcagattcctccacttttgatccct 5942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University