View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11694_low_19 (Length: 311)

Name: NF11694_low_19
Description: NF11694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11694_low_19
NF11694_low_19
[»] chr5 (45 HSPs)
chr5 (33-296)||(28614598-28614860)
chr5 (30-123)||(32059551-32059644)
chr5 (30-122)||(25586926-25587018)
chr5 (27-123)||(13038562-13038658)
chr5 (27-123)||(13108557-13108653)
chr5 (27-119)||(38631069-38631161)
chr5 (30-122)||(38684202-38684294)
chr5 (32-123)||(11465020-11465111)
chr5 (30-125)||(27498842-27498937)
chr5 (30-125)||(33709612-33709706)
chr5 (42-124)||(1827653-1827735)
chr5 (32-122)||(5067295-5067385)
chr5 (30-124)||(11926613-11926707)
chr5 (32-122)||(34310136-34310226)
chr5 (30-119)||(8484772-8484861)
chr5 (30-87)||(12398559-12398616)
chr5 (30-123)||(15641216-15641309)
chr5 (32-105)||(37495058-37495131)
chr5 (27-119)||(4603774-4603866)
chr5 (42-122)||(22392695-22392775)
chr5 (30-122)||(31288057-31288149)
chr5 (30-109)||(15971233-15971312)
chr5 (30-120)||(19145522-19145612)
chr5 (40-121)||(36954813-36954894)
chr5 (30-122)||(23270633-23270725)
chr5 (30-122)||(30485822-30485914)
chr5 (30-101)||(10869676-10869747)
chr5 (30-109)||(42193492-42193571)
chr5 (27-105)||(8780489-8780567)
chr5 (32-122)||(37397707-37397797)
chr5 (30-87)||(18207236-18207293)
chr5 (30-122)||(7085737-7085829)
chr5 (30-122)||(12317261-12317353)
chr5 (30-122)||(15931053-15931145)
chr5 (30-109)||(6014391-6014470)
chr5 (27-124)||(16616111-16616208)
chr5 (30-87)||(19456321-19456377)
chr5 (58-119)||(25750750-25750811)
chr5 (49-122)||(34049816-34049889)
chr5 (30-87)||(7151358-7151415)
chr5 (27-64)||(24158274-24158311)
chr5 (54-119)||(27487690-27487755)
chr5 (27-119)||(10399770-10399862)
chr5 (49-85)||(14656645-14656681)
chr5 (43-123)||(25343232-25343312)
[»] chr7 (53 HSPs)
chr7 (27-122)||(40332097-40332192)
chr7 (30-122)||(2751269-2751361)
chr7 (30-122)||(7175973-7176065)
chr7 (30-122)||(7275275-7275367)
chr7 (30-122)||(40543021-40543113)
chr7 (27-109)||(9718095-9718177)
chr7 (30-119)||(28089817-28089906)
chr7 (30-122)||(21217944-21218036)
chr7 (30-118)||(22119890-22119978)
chr7 (30-121)||(2103054-2103145)
chr7 (31-121)||(7799944-7800034)
chr7 (30-123)||(10091185-10091278)
chr7 (30-123)||(18044104-18044197)
chr7 (30-87)||(22703519-22703576)
chr7 (30-122)||(22638290-22638382)
chr7 (30-117)||(42814867-42814954)
chr7 (32-122)||(2344297-2344387)
chr7 (30-124)||(17197061-17197155)
chr7 (27-121)||(19421230-19421324)
chr7 (26-124)||(27312148-27312246)
chr7 (49-122)||(23854394-23854467)
chr7 (30-123)||(27009356-27009449)
chr7 (30-122)||(11997847-11997939)
chr7 (30-122)||(17212051-17212143)
chr7 (30-106)||(22299863-22299939)
chr7 (30-105)||(21835166-21835241)
chr7 (32-122)||(32849589-32849679)
chr7 (27-109)||(42913621-42913703)
chr7 (30-78)||(654815-654863)
chr7 (30-118)||(13332534-13332622)
chr7 (30-118)||(27704004-27704092)
chr7 (30-122)||(28646967-28647059)
chr7 (27-118)||(1469114-1469205)
chr7 (30-109)||(22696331-22696410)
chr7 (30-119)||(8435806-8435895)
chr7 (41-122)||(25333417-25333498)
chr7 (30-123)||(39145763-39145856)
chr7 (27-119)||(12211643-12211735)
chr7 (35-87)||(22264618-22264670)
chr7 (34-122)||(31713010-31713098)
chr7 (30-77)||(35173143-35173190)
chr7 (30-80)||(16374034-16374084)
chr7 (56-109)||(9683837-9683890)
chr7 (43-87)||(14199790-14199834)
chr7 (43-122)||(21370595-21370674)
chr7 (30-109)||(23012619-23012698)
chr7 (32-89)||(9183175-9183233)
chr7 (30-80)||(28950911-28950961)
chr7 (30-80)||(29861711-29861760)
chr7 (41-87)||(31273947-31273993)
chr7 (49-122)||(31197589-31197662)
chr7 (49-122)||(43785429-43785502)
chr7 (27-87)||(37056247-37056307)
[»] chr3 (52 HSPs)
chr3 (30-124)||(21362935-21363029)
chr3 (30-122)||(40133560-40133652)
chr3 (30-122)||(48977382-48977474)
chr3 (27-122)||(30257618-30257713)
chr3 (30-124)||(35492903-35492997)
chr3 (30-123)||(30807264-30807357)
chr3 (30-122)||(7470326-7470418)
chr3 (30-122)||(7485636-7485728)
chr3 (30-122)||(18176998-18177090)
chr3 (31-123)||(46576341-46576433)
chr3 (27-122)||(45529862-45529957)
chr3 (30-109)||(52821746-52821825)
chr3 (30-124)||(40940817-40940911)
chr3 (30-115)||(26174114-26174199)
chr3 (30-122)||(8456261-8456353)
chr3 (30-122)||(15566610-15566701)
chr3 (30-109)||(26108299-26108378)
chr3 (27-121)||(52455757-52455851)
chr3 (30-120)||(53424287-53424377)
chr3 (30-122)||(25289825-25289917)
chr3 (30-122)||(34492686-34492778)
chr3 (30-124)||(49258373-49258467)
chr3 (30-123)||(45272527-45272620)
chr3 (30-102)||(49167070-49167142)
chr3 (31-122)||(4252508-4252599)
chr3 (32-119)||(25344170-25344257)
chr3 (30-109)||(25379768-25379847)
chr3 (30-125)||(32151416-32151510)
chr3 (32-122)||(31537951-31538041)
chr3 (27-124)||(4462625-4462722)
chr3 (30-87)||(9853645-9853702)
chr3 (32-109)||(11390609-11390686)
chr3 (30-87)||(19857080-19857137)
chr3 (30-123)||(29915380-29915473)
chr3 (30-123)||(29964533-29964626)
chr3 (30-122)||(50582986-50583078)
chr3 (30-81)||(53288823-53288874)
chr3 (27-122)||(55287797-55287892)
chr3 (30-104)||(53234021-53234095)
chr3 (30-87)||(1692863-1692920)
chr3 (30-87)||(25017544-25017601)
chr3 (30-87)||(39041963-39042020)
chr3 (30-122)||(38732960-38733052)
chr3 (32-87)||(8958149-8958204)
chr3 (30-87)||(10083930-10083987)
chr3 (30-87)||(10190853-10190910)
chr3 (30-122)||(9842915-9843006)
chr3 (30-81)||(31766726-31766777)
chr3 (32-66)||(8170730-8170764)
chr3 (30-71)||(2511408-2511449)
chr3 (30-127)||(55371396-55371493)
chr3 (30-118)||(6041783-6041871)
[»] chr1 (50 HSPs)
chr1 (30-122)||(46607804-46607896)
chr1 (30-124)||(24674385-24674479)
chr1 (30-122)||(4621348-4621440)
chr1 (30-125)||(8077638-8077733)
chr1 (30-122)||(168195-168287)
chr1 (30-122)||(7197357-7197449)
chr1 (30-122)||(15059513-15059605)
chr1 (30-109)||(1378905-1378984)
chr1 (27-122)||(29057445-29057540)
chr1 (30-118)||(1378743-1378831)
chr1 (30-122)||(23232376-23232468)
chr1 (30-121)||(24216973-24217064)
chr1 (30-124)||(7766838-7766932)
chr1 (30-124)||(7946836-7946930)
chr1 (30-124)||(27454977-27455071)
chr1 (30-128)||(30677164-30677262)
chr1 (40-122)||(34778336-34778418)
chr1 (30-123)||(24122016-24122109)
chr1 (30-87)||(33905621-33905678)
chr1 (30-109)||(46113513-46113592)
chr1 (30-108)||(17935777-17935855)
chr1 (30-87)||(20487301-20487358)
chr1 (30-87)||(36155999-36156056)
chr1 (30-87)||(45859154-45859211)
chr1 (30-118)||(2272342-2272430)
chr1 (30-106)||(7578419-7578495)
chr1 (30-122)||(14258538-14258630)
chr1 (27-123)||(21726722-21726818)
chr1 (30-122)||(32729539-32729631)
chr1 (30-125)||(18646844-18646939)
chr1 (27-121)||(10059050-10059144)
chr1 (30-87)||(9500466-9500523)
chr1 (27-124)||(18533832-18533929)
chr1 (30-87)||(19034497-19034554)
chr1 (30-87)||(37351572-37351629)
chr1 (30-125)||(23734107-23734202)
chr1 (30-125)||(23741299-23741394)
chr1 (30-124)||(1138571-1138665)
chr1 (33-119)||(52135127-52135213)
chr1 (30-87)||(809251-809308)
chr1 (30-87)||(8779847-8779904)
chr1 (30-87)||(25237100-25237157)
chr1 (27-121)||(1486415-1486507)
chr1 (30-65)||(8254863-8254898)
chr1 (30-85)||(39964543-39964598)
chr1 (71-122)||(47091684-47091735)
chr1 (30-123)||(25496599-25496692)
chr1 (27-87)||(52336753-52336814)
chr1 (32-121)||(9926259-9926350)
chr1 (39-87)||(32930778-32930826)
[»] scaffold0576 (1 HSPs)
scaffold0576 (30-122)||(5193-5285)
[»] chr8 (44 HSPs)
chr8 (30-122)||(3734734-3734826)
chr8 (30-122)||(34237766-34237858)
chr8 (30-125)||(28193469-28193564)
chr8 (30-123)||(4718642-4718735)
chr8 (30-123)||(42643229-42643322)
chr8 (30-122)||(18532105-18532197)
chr8 (27-123)||(20305905-20306001)
chr8 (27-123)||(21092538-21092634)
chr8 (30-122)||(39349254-39349346)
chr8 (32-121)||(19471608-19471697)
chr8 (32-121)||(19542532-19542621)
chr8 (32-121)||(19590075-19590164)
chr8 (30-119)||(27746446-27746535)
chr8 (30-122)||(32879277-32879369)
chr8 (31-122)||(2618184-2618275)
chr8 (30-87)||(4698834-4698891)
chr8 (30-87)||(14632987-14633044)
chr8 (31-104)||(24018398-24018471)
chr8 (30-109)||(21603241-21603320)
chr8 (30-87)||(15259517-15259574)
chr8 (30-119)||(34694687-34694776)
chr8 (27-87)||(8765634-8765694)
chr8 (30-122)||(28088284-28088376)
chr8 (30-109)||(264510-264589)
chr8 (30-109)||(651332-651411)
chr8 (30-109)||(837067-837146)
chr8 (30-109)||(41070772-41070851)
chr8 (32-122)||(7558056-7558146)
chr8 (43-87)||(20469950-20469994)
chr8 (44-87)||(2166732-2166775)
chr8 (32-119)||(8387557-8387644)
chr8 (30-121)||(42328004-42328094)
chr8 (50-87)||(8042687-8042724)
chr8 (30-109)||(21667561-21667640)
chr8 (27-81)||(1372509-1372563)
chr8 (30-120)||(28964033-28964123)
chr8 (30-123)||(3403613-3403706)
chr8 (30-87)||(3794824-3794881)
chr8 (30-67)||(6953118-6953155)
chr8 (49-122)||(26168978-26169051)
chr8 (30-75)||(36094729-36094774)
chr8 (30-62)||(25248407-25248439)
chr8 (27-82)||(27750771-27750827)
chr8 (32-79)||(35690048-35690096)
[»] chr6 (30 HSPs)
chr6 (30-122)||(15360209-15360301)
chr6 (32-123)||(28672060-28672151)
chr6 (30-122)||(654257-654349)
chr6 (30-122)||(9238969-9239061)
chr6 (31-122)||(12591631-12591722)
chr6 (30-125)||(34147337-34147432)
chr6 (30-125)||(34159953-34160048)
chr6 (33-123)||(22576060-22576150)
chr6 (30-125)||(3222746-3222840)
chr6 (30-109)||(11448878-11448957)
chr6 (30-120)||(8479308-8479398)
chr6 (30-123)||(33499467-33499561)
chr6 (32-125)||(9843929-9844022)
chr6 (30-123)||(11007158-11007251)
chr6 (30-122)||(13753234-13753326)
chr6 (27-87)||(14212921-14212981)
chr6 (27-123)||(21148618-21148714)
chr6 (31-87)||(1344964-1345020)
chr6 (30-122)||(5360182-5360274)
chr6 (30-101)||(17706418-17706489)
chr6 (30-87)||(9208281-9208338)
chr6 (30-87)||(17081165-17081222)
chr6 (31-120)||(21982432-21982521)
chr6 (30-76)||(12390465-12390511)
chr6 (30-87)||(17149567-17149624)
chr6 (30-78)||(11840939-11840987)
chr6 (27-87)||(31039049-31039109)
chr6 (30-105)||(9690749-9690824)
chr6 (30-87)||(28968153-28968210)
chr6 (49-85)||(3433603-3433639)
[»] chr4 (40 HSPs)
chr4 (30-122)||(25852208-25852300)
chr4 (31-122)||(52983613-52983704)
chr4 (27-122)||(1985830-1985925)
chr4 (27-109)||(13584362-13584444)
chr4 (32-109)||(51535620-51535697)
chr4 (30-122)||(32986191-32986283)
chr4 (30-122)||(34844869-34844961)
chr4 (30-122)||(54127453-54127545)
chr4 (30-121)||(13873406-13873497)
chr4 (49-131)||(19660662-19660744)
chr4 (30-123)||(33696390-33696483)
chr4 (30-110)||(2351019-2351099)
chr4 (30-122)||(27528906-27528998)
chr4 (30-122)||(40058963-40059055)
chr4 (30-87)||(7392074-7392131)
chr4 (49-122)||(46714386-46714459)
chr4 (30-122)||(22625181-22625273)
chr4 (30-122)||(35674852-35674944)
chr4 (30-124)||(20566341-20566436)
chr4 (32-123)||(41621709-41621800)
chr4 (30-87)||(49287887-49287944)
chr4 (30-122)||(5609313-5609405)
chr4 (31-87)||(12500170-12500226)
chr4 (30-118)||(34835527-34835615)
chr4 (49-109)||(35229175-35229235)
chr4 (43-118)||(42245744-42245819)
chr4 (30-87)||(20078095-20078152)
chr4 (30-87)||(33992655-33992712)
chr4 (31-118)||(45787816-45787902)
chr4 (30-76)||(38740890-38740936)
chr4 (56-109)||(13550215-13550268)
chr4 (49-118)||(43719195-43719264)
chr4 (39-87)||(44343543-44343591)
chr4 (60-116)||(55961883-55961939)
chr4 (30-109)||(32942377-32942456)
chr4 (30-76)||(3392776-3392822)
chr4 (31-101)||(19220548-19220618)
chr4 (30-124)||(36131621-36131715)
chr4 (30-66)||(28791165-28791201)
chr4 (32-87)||(38869804-38869860)
[»] scaffold0199 (1 HSPs)
scaffold0199 (30-123)||(8518-8611)
[»] scaffold0026 (1 HSPs)
scaffold0026 (30-122)||(97477-97569)
[»] chr2 (41 HSPs)
chr2 (27-87)||(5394046-5394106)
chr2 (30-122)||(15037953-15038045)
chr2 (39-123)||(4852551-4852635)
chr2 (30-118)||(17324764-17324852)
chr2 (30-122)||(33827684-33827776)
chr2 (31-121)||(14946774-14946864)
chr2 (30-124)||(41313984-41314078)
chr2 (30-122)||(25293160-25293252)
chr2 (30-122)||(44946164-44946256)
chr2 (49-123)||(6714411-6714485)
chr2 (32-118)||(44976267-44976353)
chr2 (30-87)||(10582101-10582158)
chr2 (32-124)||(11941323-11941415)
chr2 (42-122)||(18976548-18976628)
chr2 (30-122)||(32845085-32845177)
chr2 (34-121)||(8192466-8192553)
chr2 (30-87)||(36242423-36242480)
chr2 (30-122)||(36390679-36390769)
chr2 (30-87)||(43374436-43374493)
chr2 (30-106)||(27290598-27290674)
chr2 (49-125)||(32526215-32526291)
chr2 (38-120)||(19054021-19054103)
chr2 (30-119)||(4567548-4567637)
chr2 (30-123)||(24195997-24196090)
chr2 (30-87)||(29361583-29361639)
chr2 (41-85)||(35171831-35171875)
chr2 (30-109)||(4618796-4618875)
chr2 (53-104)||(40997484-40997535)
chr2 (32-87)||(41329872-41329927)
chr2 (50-100)||(44610090-44610140)
chr2 (30-87)||(1191542-1191599)
chr2 (32-121)||(3405265-3405354)
chr2 (42-87)||(8258926-8258971)
chr2 (30-107)||(23787119-23787196)
chr2 (37-122)||(27269468-27269553)
chr2 (30-123)||(30466941-30467034)
chr2 (30-70)||(2140594-2140634)
chr2 (27-87)||(19849862-19849922)
chr2 (49-87)||(34516538-34516576)
chr2 (30-87)||(29698176-29698233)
chr2 (27-82)||(21195655-21195711)
[»] scaffold0068 (1 HSPs)
scaffold0068 (30-123)||(41755-41848)
[»] scaffold0051 (1 HSPs)
scaffold0051 (30-121)||(52982-53073)
[»] scaffold0049 (1 HSPs)
scaffold0049 (32-122)||(66756-66846)
[»] scaffold0623 (1 HSPs)
scaffold0623 (30-118)||(1167-1255)
[»] scaffold0459 (1 HSPs)
scaffold0459 (30-118)||(10804-10892)
[»] scaffold0366 (2 HSPs)
scaffold0366 (30-118)||(9410-9498)
scaffold0366 (30-118)||(12111-12199)
[»] scaffold0328 (1 HSPs)
scaffold0328 (30-122)||(14985-15077)
[»] scaffold0070 (1 HSPs)
scaffold0070 (30-122)||(40319-40411)
[»] scaffold0717 (1 HSPs)
scaffold0717 (27-109)||(66-148)
[»] scaffold0019 (1 HSPs)
scaffold0019 (30-87)||(161838-161895)
[»] scaffold0240 (1 HSPs)
scaffold0240 (48-123)||(12883-12958)
[»] scaffold0460 (1 HSPs)
scaffold0460 (30-87)||(8290-8347)
[»] scaffold0217 (1 HSPs)
scaffold0217 (30-122)||(7420-7512)
[»] scaffold0157 (1 HSPs)
scaffold0157 (31-87)||(20251-20307)
[»] scaffold0102 (1 HSPs)
scaffold0102 (30-77)||(39131-39178)
[»] scaffold0126 (1 HSPs)
scaffold0126 (32-66)||(25331-25365)
[»] scaffold0028 (1 HSPs)
scaffold0028 (32-122)||(27770-27860)


Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 33 - 296
Target Start/End: Original strand, 28614598 - 28614860
Alignment:
Q  33 aattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaacaaaaac 132  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||| ||| | ||||||||   ||||  |||||||||||||||||||||    
T  28614598 aattgacatcagaggtaatcgaacctgagatctttggaggaacaaactctaagatctcaagccaaccactca-ccaaccccaaatgggttaaacaaaaac 28614696  T
Q  133 ttaatttaaccaaaaagagaaataattaagattaaccttcttttgcagcaacctcttcttcctttcttcctactttcattaatagaatctgcagatttaa 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28614697 ttaatttaaccaaaaagagaaataattaagattaaccttcttttgtagcaacctcttcttcctttcttcctactttcattaatagaatctgcagatttaa 28614796  T
Q  233 ttagattcagaaaatcatcacaacttggttgagagataatagaaagagcctcagtgaaagatct 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28614797 ttagattcagaaaatcatcacaacttggttgagagataatagaaagagcctcagtgaaagatct 28614860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 32059551 - 32059644
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||  ||||||||||||    
T  32059551 cgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 32059644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 25587018 - 25586926
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  25587018 cgaaattggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 25586926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 13038562 - 13038658
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  ||   |||||||||||||||  ||||||||||||    
T  13038562 catcaaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtta 13038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 13108557 - 13108653
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||| |||||| ||||||||| |||||||||||||| || |||||||||||||||||||||  || | |||||||||||||||  ||||||||||||    
T  13108557 catcaaaattggcaccagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 13108653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 38631069 - 38631161
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    ||||||||||| ||||||||| ||||||| ||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||    
T  38631069 catcgaaattggcaccagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 38631161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 38684294 - 38684202
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || |||||||||| ||||||  |||| ||||||    
T  38684294 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaaccccaagtgggtt 38684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 11465020 - 11465111
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||| | ||| |||||||||||  | ||||||||||    
T  11465020 aaattggcaccagaggaaatcgaacctgagacatttggaggagcaaactccaagatttcaagccaatcactaggccaacccgaaatgggtta 11465111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 27498842 - 27498937
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||  || | ||||||||||| |||  ||||||||||||||    
T  27498842 cgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaaccccaaatgggttaaa 27498937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 33709612 - 33709706
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||||||    
T  33709612 cgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa-cccaaatgggttaaa 33709706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 1827653 - 1827735
Alignment:
Q  42 cagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| ||| | ||||||||||| |||  |||||||||||||    
T  1827653 cagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgggttaa 1827735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 5067385 - 5067295
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||||||||||  |||||||||||||| || ||||||||||||||| |||||  || |||||||||||| |||| ||||||||||||    
T  5067385 aaattgacaccagagaaaatcgaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactagaccaactccaaatgggtt 5067295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 11926613 - 11926707
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||  ||   |||||||||||||||  |||||||||||||    
T  11926613 cgaaattggcaccagagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttaa 11926707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 34310226 - 34310136
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | | |||||||||||||  |||||||||||    
T  34310226 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagattccaagccgaccactaggccaaccccaaatgggtt 34310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 8484772 - 8484861
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    |||||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||    
T  8484772 cgaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 8484861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 12398559 - 12398616
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  12398559 cgaaattgacaccatagggaatcgaacctgagacctttggaggagcaaactccaagat 12398616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 15641216 - 15641309
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||| ||  ||||||||||||    
T  15641216 cgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaatgggtta 15641309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 37495131 - 37495058
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactagg 105  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||    
T  37495131 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactagg 37495058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 4603866 - 4603774
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    ||||||||||| ||||||| | |||||||| ||||| ||||||||||||||||||||||||  || | |||||||||||||||  ||||||||    
T  4603866 catcgaaattggcaccagaaggaatcgaacttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 4603774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 22392775 - 22392695
Alignment:
Q  42 cagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  22392775 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 22392695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 31288057 - 31288149
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||  || | |||||||||||||||  | |||||||||    
T  31288057 cgaaattggcaccaaagggaatcgaacatgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacccaaaatgggtt 31288149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 15971233 - 15971312
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||  || | ||||||||| |||||    
T  15971233 cgaaattgacatcagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaa 15971312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 19145522 - 19145612
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatggg 120  Q
    |||||||| ||||||||| ||||||||| ||||||||  |||||||| ||||||||||  || |||||||||||||||||  |||||||||    
T  19145522 cgaaattggcaccagagggaatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaaccccaaatggg 19145612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 36954894 - 36954813
Alignment:
Q  40 accagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||||  || | |||||||||||||||  ||||||||||    
T  36954894 accagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaaggcaaccactaggccaaccccaaatgggt 36954813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 23270633 - 23270725
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| || | |||| |||||||| ||||||||||||| ||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  23270633 cgaaattggcatcggaggaaatcgaacttgagacctttggatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 23270725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 30485914 - 30485822
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||||||||||||  ||||||||||||||||| || ||||||||||||||||||  || | ||||| || ||||||  |||||||||||    
T  30485914 cgaaattgacaccagagtgaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccgctgggccaaccccaaatgggtt 30485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 10869676 - 10869747
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccac 101  Q
    ||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||  || |||||||||    
T  10869676 cgaaattggaaccagatggaatcgaacctgagacctttggaggagcaaactccaagatcgcaagtcaaccac 10869747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 42193571 - 42193492
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| || |||||| ||||||||||||||||| ||| | |||||||||||||||  || |||||||||||||||||    
T  42193571 cgaaattggcatcagaggaaatcgaacctgagacctctggggaagcaaactccaagatcccaagtcaaccactaggccaa 42193492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 8780567 - 8780489
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactagg 105  Q
    ||||||||||||||| ||||  ||||||||||||||||||  |||||||| ||||||||||   |||||||||||||||    
T  8780567 catcgaaattgacacaagagacaatcgaacctgagaccttgagaggagcacactccaagatccgatgtcaaccactagg 8780489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 37397797 - 37397707
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||||| || |||| ||||| ||||||||||||||||||||||||||||  || | |||||||||| ||||  |||||| ||||    
T  37397797 aaattgacaccagggggaatcaaaccttagacctttggaggagcaaactccaagatcacaagccaaccactagaccaaccccaaataggtt 37397707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 18207293 - 18207236
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| |||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  18207293 cgaaattggcaccggagggaatcgaacctgagacctctggaggagcaaactccaagat 18207236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 7085737 - 7085829
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||||||| ||||| ||||||||| ||||||| |||||||| ||||||||||||  || | ||||||||| ||||   |||||||||||    
T  7085737 cgaaattgacactagagggaatcgaaccggagacctctggaggagaaaactccaagatcccaagccaaccactaagccagccccaaatgggtt 7085829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 12317261 - 12317353
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||||||||||| | |||| |||| |||||||   |||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  12317261 cgaaattgacaccagatgaaatcaaacccgagacctcaagaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggtt 12317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 15931145 - 15931053
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||| | || || |||||||||||||||  || |  ||||||||||||||  |||||||||||    
T  15931145 cgaaattggcaccagagggaatcgaacctgagacttgtgaagaagcaaactccaagatcccaagctaaccactaggccaaccccaaatgggtt 15931053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 6014391 - 6014470
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||||||| |||||||||||||||| || ||||| |||||||||||||||  || | ||| |||||||||||    
T  6014391 cgaaattggcaccagaagtaatcgaacctgagatctctggagaagcaaactccaagatcccaagccaatcactaggccaa 6014470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 16616208 - 16616111
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    ||||||||||||||  ||||  ||||||| |||||| |||| |||||||||||||||||||  || | |||| |||| ||||||  ||||||||||||    
T  16616208 catcgaaattgacagtagagtaaatcgaatctgagatctttagaggagcaaactccaagatcccaagccaactactaagccaatctcaaatgggttaa 16616111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 19456321 - 19456377
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  19456321 cgaaattggcaccagaggga-tcgaacctgagacctctggaggagcaaactccaagat 19456377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 25750750 - 25750811
Alignment:
Q  58 tgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    |||||||| |||||||||||||||||||||  || |||||||||||||||||  ||||||||    
T  25750750 tgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 25750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 34049889 - 34049816
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||||||||| |||||||||||||||||||||  || | |||| ||||| ||||  |||||||||||    
T  34049889 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaactactagcccaaccccaaatgggtt 34049816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 7151415 - 7151358
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||| ||||||| | |||||||| |||||| | |||||||||||||||||||    
T  7151415 cgaaattgacgccagagggagtcgaacctaagacctcttgaggagcaaactccaagat 7151358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 24158274 - 24158311
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacc 64  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  24158274 catcgaaattgacaccagaaggaatcgaacctgagacc 24158311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 27487690 - 27487755
Alignment:
Q  54 aacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    |||||||||||| |||| ||||||||||||| ||  ||  ||||||||||||||||  ||||||||    
T  27487690 aacctgagacctctggaagagcaaactccaaaatcccaaatcaaccactaggccaaccccaaatgg 27487755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 10399862 - 10399770
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    ||||||||||| | ||||||  |||| ||||||| | ||||| || |||||||||||||||   | |||||||||||| ||||  ||||||||    
T  10399862 catcgaaattggcgccagagagaatcaaacctgaaatctttgaagaagcaaactccaagatccaaagtcaaccactagaccaacaccaaatgg 10399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 14656645 - 14656681
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaag 85  Q
    ||||||||||||||||||  |||||||||||||||||    
T  14656645 aatcgaacctgagaccttgagaggagcaaactccaag 14656681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 25343312 - 25343232
Alignment:
Q  43 agaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||| |||| ||| |||||||||   | ||||| | |||||||| ||| |||||||||||||||||  ||||||||||||    
T  25343312 agaggaaatcaaacttgagaccttgaaaagagcacaatccaagatttcaagtcaaccactaggccaaccccaaatgggtta 25343232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 40332192 - 40332097
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||| |||| ||||||||||||    
T  40332192 catcgaaattgacaccagaggaaatcgaacctgagacctttagaggagcaaactccaagatttcaagccaaccactagaccaactccaaatgggtt 40332097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 2751361 - 2751269
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  2751361 cgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 2751269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 7175973 - 7176065
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  7175973 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7176065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 7275367 - 7275275
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  7275367 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7275275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 40543021 - 40543113
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  40543021 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 40543113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 9718095 - 9718177
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| || ||| | |||||||||||||||    
T  9718095 catcgaaattgacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaa 9718177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 28089906 - 28089817
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    ||||||||||||||||||  |||||||||||||| | ||||||||||||||||||||| ||| | |||||||||||||||  ||||||||    
T  28089906 cgaaattgacaccagagggtatcgaacctgagacatctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgg 28089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 21217944 - 21218036
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| || |||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  21217944 cgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 21218036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 22119978 - 22119890
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||    
T  22119978 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 22119890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 2103145 - 2103054
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||    
T  2103145 cgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 2103054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 7799944 - 7800034
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | ||||||||||| |||  ||||||||||    
T  7799944 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatgggt 7800034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 10091278 - 10091185
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||| ||||  ||||||||||||    
T  10091278 cgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtta 10091185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 18044197 - 18044104
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||| ||||| ||||||||||| ||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||||    
T  18044197 cgaaattggcacaagagggaatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 18044104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 22703576 - 22703519
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  22703576 cgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaactccaagat 22703519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 22638382 - 22638290
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||  ||||||||| |||||||||||||||||||| | |||||||||| ||||| ||| |||||||||||| ||||  |||||||||||    
T  22638382 cgaaattagcaccagagggaatcgaacctgagacctttgaaagagcaaactctaagatctcaagtcaaccactagaccaaccccaaatgggtt 22638290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 42814954 - 42814867
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaat 117  Q
    |||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||  || ||||||||||| ||||| |||||||    
T  42814954 cgaaattgacaccagagggaatcgaacctgagacttcaagaggagcaaactccaagatcccaagtcaaccactaagccaactccaaat 42814867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 2344387 - 2344297
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||| ||||||| | ||||||| |||||| ||||||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  2344387 aaattggcaccagaaggaatcgaatctgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 2344297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 17197061 - 17197155
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||  ||   ||||||||||||| |  |||||||||||||    
T  17197061 cgaaattggcaccagagggaatcgaacttgagacctatggaggagcaaactccaagatcgcaaaccaaccactaggccgaccccaaatgggttaa 17197155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 19421324 - 19421230
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    ||||||||||||||||||| | ||||||||||||||||| | |||||||||||||||||||  || | ||||||||| | |||  ||||||||||    
T  19421324 catcgaaattgacaccagaagaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaagtcaaccccaaatgggt 19421230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 27312246 - 27312148
Alignment:
Q  26 acatcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||||||| ||| ||||| |||||||||||| |||| | |||||||||||||||||||  || | |||||||||||||||  |||||| ||||||    
T  27312246 acatcgaaattggcactagagggaatcgaacctgaaacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaataggttaa 27312148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 23854467 - 23854394
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  23854467 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 23854394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 27009449 - 27009356
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| |||||||||  |||||||||||||||| |||| ||||||||||||||||   | | |||||||||||||||  ||||||||||||    
T  27009449 cgaaattggcaccagaggggatcgaacctgagacctctggatgagcaaactccaagatccgaagccaaccactaggccaaccccaaatgggtta 27009356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 11997939 - 11997847
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||  || | |||||||||| ||||   ||||||||||    
T  11997939 cgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagcccaaccacaaatgggtt 11997847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 17212143 - 17212051
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||  ||| ||||||||||||| |||||||||||||||||||||  || | ||||||||| |||||  |||||||||||    
T  17212143 cgaaattggcaccagagagaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaatgggtt 17212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 22299939 - 22299863
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggc 106  Q
    |||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||  || | ||||||||||||    
T  22299939 cgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactaggc 22299863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 21835241 - 21835166
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactagg 105  Q
    |||||||| ||||||||| |||||||||||||| || |||||||||||||||||||||  || | |||||||||||    
T  21835241 cgaaattggcaccagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactagg 21835166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 32849679 - 32849589
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||| || ||||| |||| |||| ||||||| |||||||||||||||||||||  || |||||||||||||| ||  |||||||||||    
T  32849679 aaattgagactagagggaatcaaacccgagacctctggaggagcaaactccaagatcccaagtcaaccactaggctaaccccaaatgggtt 32849589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 42913621 - 42913703
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    ||||||||||| ||||| | | ||||||||||||||||| | |||||||||||||||||||  || | |||||||||||||||    
T  42913621 catcgaaattggcaccatatgaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaa 42913703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 654815 - 654863
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaa 78  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  654815 cgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaa 654863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 13332534 - 13332622
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| | ||||||| ||||| |||||||||||  ||||||||||||||||||||  || | |||||||||||||||  |||||||    
T  13332534 cgaaattggctccagagggaatcgtacctgagacctcaggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 13332622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 27704092 - 27704004
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| ||||| ||| ||||||||||||||||| || ||||||||||| |||||| ||| | |||||||| | |||| ||||||||    
T  27704092 cgaaattggcaccaaaggaaatcgaacctgagacctctgtaggagcaaacttcaagatctcaagccaaccactggaccaactccaaatg 27704004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 28647059 - 28646967
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||||  ||| |||| ||||||||||  || ||||| |||||||||||  |||||| ||||    
T  28647059 cgaaattggcaccagagggaatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccccaaataggtt 28646967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 1469205 - 1469114
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    ||||||||||| ||  | ||| ||||||||||||||||||  || || ||||||||||||| ||| |||||||||||||||||  |||||||    
T  1469205 catcgaaattggcattaaaggaaatcgaacctgagaccttgagatgaacaaactccaagatttcaagtcaaccactaggccaaccccaaatg 1469114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 22696410 - 22696331
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||||||||| |||| |||||||||||||  |||||||| ||||||||||  ||  ||||||||||||||||    
T  22696410 cgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaa 22696331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 8435806 - 8435895
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    |||||||| ||||||||| |||||||||| ||| |||   ||||||||||||||||||  || |||||||||||| ||||  ||||||||    
T  8435806 cgaaattggcaccagaggaaatcgaacctaagatcttcaaaggagcaaactccaagatcccaagtcaaccactagaccaaccccaaatgg 8435895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 25333498 - 25333417
Alignment:
Q  41 ccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||  |||||||||||||||| ||||| |||||||||||||||  || | ||||||||| |||||  |||||||||||    
T  25333498 ccagagggtatcgaacctgagacctctggagaagcaaactccaagatcccaagccaaccactaagccaaccccaaatgggtt 25333417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 39145763 - 39145856
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||||| ||| |||||||||  |||| | |||||||||||||||||||||  || ||||||||||||| |||   |||||||||||    
T  39145763 cgaaattggcaccacagggaatcgaaccgaagacatctggaggagcaaactccaagatcccaagtcaaccactaggtcaacctcaaatgggtta 39145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 12211643 - 12211735
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    ||||||||||| ||||||||| |||| ||||||||| |||  |||||||| ||||||||||   | | |||||||||||||||  ||||||||    
T  12211643 catcgaaattggcaccagaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaaccccaaatgg 12211735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 22264618 - 22264670
Alignment:
Q  35 ttgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||||||||| ||||||| ||||||||||  |||||||||||||||||||    
T  22264618 ttgacaccagagggaatcgaatctgagaccttgagaggagcaaactccaagat 22264670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 31713010 - 31713098
Alignment:
Q  34 attgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||| ||||||||| |||| | |||||||||| | |||||||||||||||||||  ||   |||||||||||||||  |||||||||||    
T  31713010 attggcaccagaggaaatcaatcctgagacctctcgaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 31713098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 35173143 - 35173190
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaa 77  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||    
T  35173143 cgaaattgacatcagaggaaatcaaacctgagacctttggaggagcaa 35173190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 16374084 - 16374034
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaact 80  Q
    |||||||| ||||||||| ||||||| ||||||||| ||||||||||||||    
T  16374084 cgaaattggcaccagagggaatcgaatctgagacctctggaggagcaaact 16374034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 9683890 - 9683837
Alignment:
Q  56 cctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||||| | |||||||||||||| |||| ||| |||||||||||||||||    
T  9683890 cctgagacctctagaggagcaaactcccagatctcaagtcaaccactaggccaa 9683837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 14199790 - 14199834
Alignment:
Q  43 agaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||    
T  14199790 agagggaatcgaacctgagacctctggaggaggaaactccaagat 14199834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 21370674 - 21370595
Alignment:
Q  43 agaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||| ||||||||||||||| | || ||||| ||||||||||||  ||   |||||||||||||||  |||||||||||    
T  21370674 agagggaatcgaacctgagacatctgaaggagtaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 21370595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 23012619 - 23012698
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||| ||||| |||| ||||| |||||| ||||| |||||||||||||||  || | |||||||| ||||||    
T  23012619 cgaaattggcactagagggaatcaaacctaagacctctggagaagcaaactccaagatcccaagccaaccactgggccaa 23012698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 9183175 - 9183233
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctt-tggaggagcaaactccaagatat 89  Q
    ||||||||||||||| |||||||||||||||| ||  ||||||||| ||||| ||||||    
T  9183175 aaattgacaccagagataatcgaacctgagactttgaggaggagcacactcccagatat 9183233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 28950961 - 28950911
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaact 80  Q
    |||||||| ||||||||| | ||||||||||||||| || |||||||||||    
T  28950961 cgaaattggcaccagagggagtcgaacctgagacctctgaaggagcaaact 28950911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 29861760 - 29861711
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaact 80  Q
    |||||||| ||||||||| ||||||||||||||||| | ||||||||||||    
T  29861760 cgaaattggcaccagagggaatcgaacctgagacctct-gaggagcaaact 29861711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 31273993 - 31273947
Alignment:
Q  41 ccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||| |||||||| ||||| || |||||||||||||||||||||    
T  31273993 ccagagggaatcgaacttgagagctctggaggagcaaactccaagat 31273947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 31197662 - 31197589
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||| |||||||||| | |||| ||||||||||||||||  || | |||||||||| ||||  |||||||||||    
T  31197662 aatcaaacctgagacatctggatgagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 31197589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 43785429 - 43785502
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| |||||||||||||||||||| ||| |||||  || | |||||| |||| |||  |||||||||||    
T  43785429 aatcgaacttgagacctttggaggagcaatctcaaagatcccaagccaaccattaggtcaaccccaaatgggtt 43785502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 37056307 - 37056247
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||||||| ||||||||| ||||||| || | |||||  |||||||| ||||||||||    
T  37056307 catcgaaattggcaccagaggaaatcgaatctcaaaccttgagaggagcacactccaagat 37056247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 9e-30; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 21363029 - 21362935
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  || |||||||||||||||||  |||||||||||||    
T  21363029 cgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggttaa 21362935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 40133560 - 40133652
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||  || | |||||||||||||||  |||||||||||    
T  40133560 cgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaatgggtt 40133652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 48977474 - 48977382
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||  |||||||||||    
T  48977474 cgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 48977382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 30257713 - 30257618
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  30257713 catcgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 30257618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 35492997 - 35492903
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||||    
T  35492997 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttaa 35492903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 30807264 - 30807357
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||||    
T  30807264 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 30807357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 7470326 - 7470418
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||  |||||||||||    
T  7470326 cgaaattggcattagagggaatcgaacctgagacctttggaggagcaaactccaagatctcaagtcaaccactaggcaaaccccaaatgggtt 7470418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 7485636 - 7485728
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||| |||||  |||||||||||    
T  7485636 cgaaattggcatcagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactatgccaaccccaaatgggtt 7485728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 18176998 - 18177090
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||| |||| |||| |||||||||||||||| ||| |||||||||||||||||  |||||||||||    
T  18176998 cgaaattggcaccagagggaatcgaacctgatacctctggaagagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 18177090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 46576433 - 46576341
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||||    
T  46576433 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 46576341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 45529862 - 45529957
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  45529862 catcgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 45529957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 52821746 - 52821825
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || |||||||||||||||||    
T  52821746 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaa 52821825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 40940911 - 40940817
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||| ||||  |||||||||||||    
T  40940911 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggttaa 40940817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 26174199 - 26174114
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaa 115  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | ||||||||||||||| |||||    
T  26174199 cgaaattggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaa 26174114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 8456261 - 8456353
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||||  || | |||||||||||||||  |||||||||||    
T  8456261 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggtt 8456353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 15566610 - 15566701
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||  |||||||||||    
T  15566610 cgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaa-cccaaatgggtt 15566701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 26108378 - 26108299
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||    
T  26108378 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 26108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 52455757 - 52455851
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  |  | |||||||||||||||  ||||||||||    
T  52455757 catcaaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccctagccaaccactaggccaaccccaaatgggt 52455851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 53424287 - 53424377
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatggg 120  Q
    |||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||    
T  53424287 cgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggg 53424377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 25289825 - 25289917
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||| ||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||| ||||  |||||||||||    
T  25289825 cgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 25289917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 34492686 - 34492778
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| || |||||| |||||||| |||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  34492686 cgaaattggcagcagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 49258373 - 49258467
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||| ||||| ||||||||||||||||| |||||||||||||| ||||||  || | |||||||||||| ||  |||||||||||||    
T  49258373 cgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaaccactaggcaaaccccaaatgggttaa 49258467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 45272527 - 45272620
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||||||||| ||||||| ||||||| | |||||||||||||||||||||  || | |||| ||||||||||  ||||||||||||    
T  45272527 cgaaattggcaccagagggaatcgaaactgagacatctggaggagcaaactccaagatcccaagccaacgactaggccaaccccaaatgggtta 45272620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 49167142 - 49167070
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccact 102  Q
    |||||||||||||||||  |||||||||||| | |||||||||||||||||||||||| ||| | ||||||||    
T  49167142 cgaaattgacaccagagagaatcgaacctgatatctttggaggagcaaactccaagatctcaagccaaccact 49167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 4252508 - 4252599
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||| ||||||||| |||| ||| |||||||||  |||||||| |||||||||| ||| | |||||||||||||||  |||||||||||    
T  4252508 gaaattggcaccagagggaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaatgggtt 4252599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 25344170 - 25344257
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    |||||||||||| ||| |||| ||||||||| || ||||||||||||||| |||||  || |||||||||||||||||  ||||||||    
T  25344170 aaattgacaccaaagggaatcaaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactaggccaaccccaaatgg 25344257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 25379847 - 25379768
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||| ||| | ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||    
T  25379847 cgaaattggcactagaaggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 25379768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 32151510 - 32151416
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| ||| ||||  |||||||  ||| ||||||||||||||||||||||||||  || |||||||||||||||||  ||||||||||||||    
T  32151510 cgaaattggcactagagagaatcgaatttgaaacctttggaggagcaaactccaagatcccaagtcaaccactaggccaa-cccaaatgggttaaa 32151416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 31537951 - 31538041
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||| ||||||||| |||| ||| |||||||| |||||||||||||||||||||   | | |||||||||||||||  |||||||||||    
T  31537951 aaattggcaccagagggaatcaaacatgagacctctggaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggtt 31538041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 4462722 - 4462625
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||||||   ||||||| |||||||| |||||| |||| || ||||||||||||||| ||| | |||||||||||||||  ||||||| |||||    
T  4462722 catcgaaattggtgccagagggaatcgaacatgagacttttgaagtagcaaactccaagatctcaagccaaccactaggccaaccccaaatgagttaa 4462625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 9853702 - 9853645
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| |||| | || |||||||||||||||||||||||||||||||||||||||    
T  9853702 cgaaattggcaccggtgggaatcgaacctgagacctttggaggagcaaactccaagat 9853645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 11390686 - 11390609
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||||||||||| |||| ||||||| | ||||||||||| |||||||||||| |||   |||||||||||||||    
T  11390686 aaattgacaccagaggaaatcaaacctgaaatctttggaggagaaaactccaagatctcaaaccaaccactaggccaa 11390609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 19857137 - 19857080
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||||    
T  19857137 cgaaattgacaccaaagggaatcgaacctgagacatctggaggagcaaactccaagat 19857080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 29915380 - 29915473
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||| || ||||||| | ||||||||||||||||| |||||||||||||||||||||  || |||||||| |||| |||  | ||||||||||    
T  29915380 cgaaaatggcaccagaagaaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtta 29915473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 29964533 - 29964626
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||| || ||||||| | ||||||||||||||||| |||||||||||||||||||||  || |||||||| |||| |||  | ||||||||||    
T  29964533 cgaaaatggcaccagaagaaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtta 29964626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 50583078 - 50582986
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| || |||||| |||||||||||| |||||  |||||||||||||||||||  ||   |||||||||||||||  |||||||||||    
T  50583078 cgaaattggcaacagaggaaatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 50582986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 53288823 - 53288874
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactc 81  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  53288823 cgaaattggcaccagagggaatcgagcctgagacctttggaggagcaaactc 53288874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 55287892 - 55287797
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||| |||||| ||||||||| |||||||||||| |||| || |||||||||||| |||||  || | ||||||||| |||||  |||||||||||    
T  55287892 catcaaaattggcaccagagggaatcgaacctgaaacctctgaaggagcaaactctaagattccaagccaaccactatgccaaccccaaatgggtt 55287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 53234021 - 53234095
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactag 104  Q
    |||||||| ||||||||  ||||||||||||||| | |||||||||||||||||||||  || | ||||||||||    
T  53234021 cgaaattggcaccagagagaatcgaacctgagacttctggaggagcaaactccaagatcccaagccaaccactag 53234095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 1692920 - 1692863
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||| | | | ||||||||||||||||| |||||||||||||||||||||    
T  1692920 cgaaattgacactaaatggaatcgaacctgagacctctggaggagcaaactccaagat 1692863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 25017601 - 25017544
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||| ||| | |||||||||| ||| ||||||||||||||||||||||||    
T  25017601 cgaaattgacactagatggaatcgaacctaagatctttggaggagcaaactccaagat 25017544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 39041963 - 39042020
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||  |||||||| |||||||| |||||||||||||||||||||    
T  39041963 cgaaattggcaccagagagaatcgaacttgagacctctggaggagcaaactccaagat 39042020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 38733052 - 38732960
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||| |||||  ||||| ||||||||||| ||||||| |||||||||||||  || |||||||| ||| ||||   ||||||||||    
T  38733052 cgaaattgacaacagagagaatcggacctgagacctctggaggaacaaactccaagattccaagtcaaccattagcccaacctcaaatgggtt 38732960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 8958149 - 8958204
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||||||| |||||||| | ||||||||| ||||||| ||||||||||    
T  8958149 aaattgacaccagaggaaatcgaacataagacctttgaaggagcagactccaagat 8958204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 10083930 - 10083987
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||| ||||| |||| |||||||| ||| |||||||||||||||||||||    
T  10083930 cgaaattggcactagagggaatcaaacctgagccctctggaggagcaaactccaagat 10083987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 10190853 - 10190910
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||| ||||| |||| |||||||| ||| |||||||||||||||||||||    
T  10190853 cgaaattggcactagagggaatcaaacctgagccctctggaggagcaaactccaagat 10190910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 9843006 - 9842915
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||||||| || ||||||| | ||||||| |||||||| ||||||||||||  ||   |||||||||| ||||  |||||||||||    
T  9843006 cgaaattgacaccagtgggaatcgaatc-gagacctctggaggagaaaactccaagatcccaaaccaaccactagaccaaccccaaatgggtt 9842915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 31766777 - 31766726
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactc 81  Q
    ||||||||||| |||||| ||||||||||||||||||  |||||||| ||||    
T  31766777 cgaaattgacatcagaggaaatcgaacctgagaccttaagaggagcacactc 31766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 8170764 - 8170730
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctt 66  Q
    |||||||||||||||| ||||||||||||||||||    
T  8170764 aaattgacaccagaggaaatcgaacctgagacctt 8170730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 2511408 - 2511449
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggag 71  Q
    |||||||| ||||||||| ||||||||||||||||| |||||    
T  2511408 cgaaattggcaccagagggaatcgaacctgagacctatggag 2511449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 55371396 - 55371493
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaaca 127  Q
    |||||||| ||||| ||| |||||||| |||||||||  ||| |||| ||||||| ||  || | |||||||||||||||   ||||| |||||||||    
T  55371396 cgaaattggcaccaaagggaatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacctcaaataggttaaaca 55371493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 6041783 - 6041871
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| ||| || || |||||||| |||  ||||  ||||||||||||||||||| ||| |||||||| |||| |||  |||||||    
T  6041783 cgaaattggcactaggggcaatcgaacatgactccttgagaggagcaaactccaagatttcaagtcaaccattagggcaaccccaaatg 6041871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 46607896 - 46607804
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||  |||||||||||    
T  46607896 cgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 46607804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 24674479 - 24674385
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||||    
T  24674479 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttaa 24674385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 4621348 - 4621440
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  4621348 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 4621440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 8077733 - 8077638
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||||||    
T  8077733 cgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttaaa 8077638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 168287 - 168195
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||||||||||| | |||||||||| |||||  || | ||||||||||||||| ||||||||||||    
T  168287 cgaaattggcaccagagggaatcgaacctgagacctttgaaagagcaaactctaagatcccaagccaaccactaggccaactccaaatgggtt 168195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 7197357 - 7197449
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| || |||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  7197357 cgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7197449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 15059513 - 15059605
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  15059513 cgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggtt 15059605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 1378984 - 1378905
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||  || ||||||||||| |||||    
T  1378984 cgaaattgacaccagaggaaatcgaacatgagacttttggaggagcaaactccaagatcccaagtcaaccactaagccaa 1378905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 29057445 - 29057540
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||||  ||   |||||||||||||||  |||||||||||    
T  29057445 catcgaaattggcacaagagggaatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 29057540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 1378831 - 1378743
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||  || |||||||||||| ||||  |||||||    
T  1378831 cgaaattgacaccagagaaaatcgaacatgagacctttggaggagtaaactccaagattccaagtcaaccactagaccaaccccaaatg 1378743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 23232376 - 23232468
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| | ||||||| |||||||||||| |||| |||| ||||||||| ||||||  || |||||||||||||||||| |||||||||||    
T  23232376 cgaaattggcgccagagggaatcgaacctgaaacctctggaagagcaaacttcaagatcccaagtcaaccactaggccaatcccaaatgggtt 23232468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 24217064 - 24216973
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||||| ||||| ||||||||||||||||||||||  |||||||| ||||||||||  || ||||||||||||| |||  ||||||||||    
T  24217064 cgaaattggcaccaaaggtaatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaaccccaaatgggt 24216973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 7766838 - 7766932
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||  || |  ||||||||||||||  || ||||||||||    
T  7766838 cgaaattagcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaaccccgaatgggttaa 7766932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 7946930 - 7946836
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||||||||| |||||||| |||||||| |||||||||||||| |||||| ||| | ||||||||||| | |  |||||||||||||    
T  7946930 cgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaacttcaagatctcaagccaaccactaggtcgaccccaaatgggttaa 7946836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 27454977 - 27455071
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| || |||||  ||||||||||||||||| |||||||||||||||||||||  || | |||||||||| ||||  |||||||||||||    
T  27454977 cgaaattggcatcagagtgaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggttaa 27455071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 30677262 - 30677164
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaacaa 128  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||||| ||||  ||   ||||||||||| |||  ||||||||||| |||||    
T  30677262 cgaaattggcaccagagggaatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaatgggtttaacaa 30677164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 34778418 - 34778336
Alignment:
Q  40 accagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  34778418 accagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34778336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 24122109 - 24122016
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||  || | ||||||||| |||||  ||||||| ||||    
T  24122109 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaagccaaccccaaatgagtta 24122016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 33905621 - 33905678
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||    
T  33905621 cgaaattgataccagagggaatcgaacctgagacctctggaggagcaaactccaagat 33905678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 46113513 - 46113592
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    ||||||||  |||||||| ||||||||||||||||| |||||||||||||||||||||  ||   |||||||||||||||    
T  46113513 cgaaattggtaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaa 46113592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 17935855 - 17935777
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggcca 108  Q
    |||||||| ||| ||| | ||||||||||||||||| |||||||||||||||||||||  || ||||||||||| ||||    
T  17935855 cgaaattggcactagaaggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactatgcca 17935777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 20487301 - 20487358
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  20487301 cgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagat 20487358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 36155999 - 36156056
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  36155999 cgaaattggcaccagagggaatcgaacctgacacctctggaggagcaaactccaagat 36156056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 45859154 - 45859211
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  45859154 cgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagat 45859211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 2272430 - 2272342
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| || |||||| |||| |||||||||||| || |||||||||||| |||||  || |||||||||||||||||  |||||||    
T  2272430 cgaaattggcatcagagggaatcaaacctgagacctctgtaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatg 2272342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 7578495 - 7578419
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggc 106  Q
    |||||||| ||||| ||| ||||||||||||||||| ||||||| |||||||||||||  || | ||||||||||||    
T  7578495 cgaaattggcaccatagggaatcgaacctgagacctctggaggaacaaactccaagatcccaagccaaccactaggc 7578419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 14258538 - 14258630
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||  |||||||| ||||||||| ||||| | ||||||| |||||||||||||  || | |||||||||||||||  |||||||||||    
T  14258538 cgaaattggtaccagagggaatcgaaccagagacatctggaggaacaaactccaagatcccaagccaaccactaggccaagcccaaatgggtt 14258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 21726818 - 21726722
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||||||||| ||||| ||| ||||||||||||||||| |||||||||||||| |||||   ||  |||||||||||| |||   |||||||||||    
T  21726818 catcgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaacttcaagaacccaaatcaaccactaggtcaacctcaaatgggtta 21726722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 32729631 - 32729539
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||| ||| ||||||||||||||| ||  ||||||||||||| |||||  || | |||||||||||||||  |||||||||||    
T  32729631 cgaaattggcaccatagggaatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggtt 32729539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 18646939 - 18646844
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| ||||||||  ||||||||||||||||| ||||| ||||||||| |||||  || | ||||||||||| |||  |||||| |||||||    
T  18646939 cgaaattggcaccagagagaatcgaacctgagacctctggagaagcaaactcaaagatcacaagccaaccactaggtcaaccccaaataggttaaa 18646844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 10059144 - 10059050
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    ||||||||||||||  ||||  |||  |||||||||| ||  ||||||||||||||||||| ||| |||||||||||||| ||| ||||| ||||    
T  10059144 catcgaaattgacattagagagaattaaacctgagactttgagaggagcaaactccaagatctcaagtcaaccactaggctaatcccaaaagggt 10059050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 9500466 - 9500523
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||  ||||||||||||||||| || ||||||||||||||||||    
T  9500466 cgaaattggcaccagagagaatcgaacctgagacctctgaaggagcaaactccaagat 9500523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 18533832 - 18533929
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    ||||||||||| ||| ||||  |||| || |||| |||| ||||||||||||||| ||||| ||| ||||||||||| | |||  |||||||||||||    
T  18533832 catcgaaattggcactagagagaatcaaatctgatacctctggaggagcaaactctaagatctcaagtcaaccactatgtcaaccccaaatgggttaa 18533929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 19034497 - 19034554
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| |||||||| ||||||||||||| |||||| ||||| |||||||||||||    
T  19034497 cgaaattggcaccagagataatcgaacctgaaaccttttgaggaacaaactccaagat 19034554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 37351572 - 37351629
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| || |||| | ||||||||||||||| |||||||||||||||||||||||    
T  37351572 cgaaattggcatcagaaggaatcgaacctgagacatttggaggagcaaactccaagat 37351629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 23734202 - 23734107
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| || |||||| ||||||||||||||||| |||||||||||| || |||||  || | |||| ||||  ||||  ||||||||||||||    
T  23734202 cgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgggttaaa 23734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 23741394 - 23741299
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| || |||||| ||||||||||||||||| |||||||||||| || |||||  || | |||| ||||  ||||  ||||||||||||||    
T  23741394 cgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgggttaaa 23741299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 1138665 - 1138571
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||| ||||  | |||||||| |||||||  |||||||| |||||||||| ||| | ||||||||||| |||  |||||||||||||    
T  1138665 cgaaattggcactagagagattcgaacctaagaccttgagaggagcacactccaagatctcaagccaaccactaggtcaaccccaaatgggttaa 1138571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 52135213 - 52135127
Alignment:
Q  33 aattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    ||||| ||| |||| |||||||||||||||| ||  || ||||||||||||||||  || |||||||||||| ||||  ||||||||    
T  52135213 aattggcactagagataatcgaacctgagacattgagatgagcaaactccaagatcccaagtcaaccactagaccaaccccaaatgg 52135127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 809308 - 809251
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||| || ||||||| |||||||||||||  |||||| ||||||||||||    
T  809308 cgaaattgacactaggggtaatcaaacctgagaccttaagaggagtaaactccaagat 809251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 8779847 - 8779904
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||| ||| | ||||||| ||||||||| ||||| |||||||||||||||    
T  8779847 cgaaattgacactagaagaaatcgaagctgagacctctggagaagcaaactccaagat 8779904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 25237100 - 25237157
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||| ||||| ||||||||||||||||||  ||| |||||||||||||||    
T  25237100 cgaaattggcactagagggaatcgaacctgagaccttgagagaagcaaactccaagat 25237157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 1486507 - 1486415
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    ||||||||||| ||||| ||| ||||||||||||||||||  ||| |||  ||||||||||  || | ||||||||||| |||  ||||||||||    
T  1486507 catcgaaattggcaccaaagggaatcgaacctgagaccttgagagtagc--actccaagatcccaagccaaccactaggtcaaccccaaatgggt 1486415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 8254863 - 8254898
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacct 65  Q
    ||||||||||||||||| ||||||||||||||||||    
T  8254863 cgaaattgacaccagagataatcgaacctgagacct 8254898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 39964598 - 39964543
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaag 85  Q
    |||||||| ||||||||| |||| |||||||||||||  |||||||| ||||||||    
T  39964598 cgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaag 39964543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 47091735 - 47091684
Alignment:
Q  71 ggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||||||||| ||| | |||||||||||||||  |||||||||||    
T  47091735 ggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgggtt 47091684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 25496599 - 25496692
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||| | ||| ||||| |||||||| |||||||||  ||||||||| |||||||||  || | ||| |||||||||||  |||||| |||||    
T  25496599 cgaaataggcactagagggaatcgaacttgagaccttaagaggagcaatctccaagatcccaagccaatcactaggccaacgccaaataggtta 25496692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 52336753 - 52336814
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctt-tggaggagcaaactccaagat 87  Q
    |||| ||||||||||||||| ||||||||||||||| |||  ||||||||| ||||| ||||    
T  52336753 catccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagat 52336814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 9926259 - 9926350
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgaga--cctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||||||||||| | ||||||| ||||||  ||||  |||||||| ||||||||||  || |||||| ||||| |||  |||||||||||    
T  9926259 aaattgacaccagaaggaatcgaatctgagagaccttgagaggagcacactccaagatcccaagtcaactactagaccagctccaaatgggt 9926350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 32930826 - 32930778
Alignment:
Q  39 caccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||||| |||||||| |||||||| || ||||| ||||||||||||    
T  32930826 caccagaggaaatcgaacttgagacctctgaaggagtaaactccaagat 32930778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 5193 - 5285
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  5193 cgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 5285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 3734734 - 3734826
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  3734734 cgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 3734826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 34237766 - 34237858
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  34237766 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34237858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 28193564 - 28193469
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||| |||||||    
T  28193564 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaataggttaaa 28193469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 4718735 - 4718642
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||  || | |||||||||||||||  ||||||||||||    
T  4718735 cgaaattggcaccagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 4718642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 42643229 - 42643322
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||| ||||| ||||||| ||||||||| |||||||||||||||||||||  || |||||||||||||||||  ||||||||||||    
T  42643229 cgaaattggcactagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtta 42643322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 18532197 - 18532105
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||| | |||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  18532197 cgaaattgacatctgagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 18532105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 20306001 - 20305905
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||| |||||  || | |||||||||||||||  ||||||||||||    
T  20306001 catcgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtta 20305905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 21092634 - 21092538
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||| |||||  || | |||||||||||||||  ||||||||||||    
T  21092634 catcgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtta 21092538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 39349346 - 39349254
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||| ||||||  |||||||||||    
T  39349346 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaatgggtt 39349254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 19471697 - 19471608
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||    
T  19471697 aaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19471608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 19542621 - 19542532
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||    
T  19542621 aaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19542532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 19590075 - 19590164
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||    
T  19590075 aaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19590164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 27746446 - 27746535
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||  ||   |||||||||||||||  ||||||||    
T  27746446 cgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 27746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 32879369 - 32879277
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||| ||||||| |||||  || |||||||||||| ||||  |||||||||||    
T  32879369 cgaaattggcaccagagggaatcgaacctgagacctctggaggaccaaactcgaagatcccaagtcaaccactagaccaaccccaaatgggtt 32879277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 2618275 - 2618184
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||| ||||||||| |||||||||  |||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  2618275 gaaattggcaccagagggaatcgaacccaagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 2618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 4698834 - 4698891
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||    
T  4698834 cgaaattgacaccagagggaatcgaacctgagacctctgaaggagcaaactccaagat 4698891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 14633044 - 14632987
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  14633044 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagat 14632987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 24018471 - 24018398
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactag 104  Q
    ||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||||  || ||||||||||||    
T  24018471 gaaattgacattagaggaaatcgaacctcagacctttggaggagcaaactccaagatcccaagtcaaccactag 24018398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 21603320 - 21603241
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||||| ||| ||||||||||||||||| ||||||||||||||| |||||  || | |||||||||||||||    
T  21603320 cgaaattggcaccatagggaatcgaacctgagacctctggaggagcaaactctaagatcccaagccaaccactaggccaa 21603241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 15259517 - 15259574
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  15259517 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaatccaagat 15259574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 34694687 - 34694776
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    |||||||| ||||||| | |||||||||| |||||||  |||||||||||||||||||  || |||||||||||| ||||  ||||||||    
T  34694687 cgaaattggcaccagatggaatcgaacctaagaccttgagaggagcaaactccaagatcacaagtcaaccactagaccaaccccaaatgg 34694776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 8765634 - 8765694
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||||||| ||||||||| |||||||||||||| || ||| |||||||||||||||||    
T  8765634 catcgaaattggcaccagagggaatcgaacctgagatctctgggggagcaaactccaagat 8765694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 28088376 - 28088284
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||||||||| ||| ||||||| ||||||||| |||| || |||||||||||||  || ||||||||||| |||||  ||| |||||||    
T  28088376 cgaaattgacaccaaagggaatcgaatctgagacctctggatgaacaaactccaagatcccaagtcaaccactaagccaaccccagatgggtt 28088284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 264510 - 264589
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||| ||||| |||||||||||||| || ||||||||||||||| |||||  || | |||||||||||||||    
T  264510 cgaaattggcactagagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaa 264589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 651411 - 651332
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||| ||||| |||||||||||||| || ||||||||||||||| |||||  || | |||||||||||||||    
T  651411 cgaaattggcactagagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaa 651332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 837146 - 837067
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||| ||||| |||||||||||||| || ||||||||||||||| |||||  || | |||||||||||||||    
T  837146 cgaaattggcactagagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaa 837067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 41070851 - 41070772
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||||||||| ||| |||||||| |||||||||  ||| |||| ||||||||||  || |||||||||||||||||    
T  41070851 cgaaattgacaccaaagggaatcgaacttgagaccttgagagtagcacactccaagatcccaagtcaaccactaggccaa 41070772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 7558056 - 7558146
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||| ||||||||| ||||||| ||||||| | |||||||||||||||||||||  || |  ||| ||||||||||  |||||||||||    
T  7558056 aaattggcaccagaggaaatcgaatctgagacttctggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggtt 7558146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 20469994 - 20469950
Alignment:
Q  43 agaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  20469994 agagggaatcgaacctgagacctctggaggagcaaactccaagat 20469950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 2166775 - 2166732
Alignment:
Q  44 gaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||| ||||||||||||||||||||||| |||||||||||||||    
T  2166775 gagggaatcgaacctgagacctttggagaagcaaactccaagat 2166732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 8387557 - 8387644
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    |||||| ||||||||| |||||||| ||||||| |  ||| ||||||||| ||||| ||| | |||||||||||||||  ||||||||    
T  8387557 aaattggcaccagaggaaatcgaacttgagaccctgagagaagcaaactctaagatctcaagacaaccactaggccaaccccaaatgg 8387644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 42328094 - 42328004
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||||| || |||||| |||| ||||||| |||| |||||||| ||||||||||||  || | |||||||||||||||  ||||||||||    
T  42328094 cgaaattggcaacagagggaatcaaacctgacacctctggaggag-aaactccaagatcccaagccaaccactaggccaaccccaaatgggt 42328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 8042724 - 8042687
Alignment:
Q  50 atcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||||| |||||||||||||||||||||||    
T  8042724 atcgaacctgagacttttggaggagcaaactccaagat 8042687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 21667640 - 21667561
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||  ||||| ||| |||||||||||| | |||||||||||||| |||||||||  || | |||||||||| ||||    
T  21667640 cgaaattagcaccaaaggaaatcgaacctgaaatctttggaggagcaacctccaagattccaagccaaccactagaccaa 21667561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 1372509 - 1372563
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactc 81  Q
    |||| ||||||||| |||||| ||||||||||||||||||  |||||||| ||||    
T  1372509 catcaaaattgacatcagagggaatcgaacctgagaccttaagaggagcacactc 1372563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 28964123 - 28964033
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatggg 120  Q
    |||||||| ||||||| | |||||||| ||| |||||  ||||||||||||| ||||| |||   |||||||||| ||||  |||||||||    
T  28964123 cgaaattggcaccagatggaatcgaacatgaaaccttaagaggagcaaactctaagatctcaaaccaaccactagaccaaccccaaatggg 28964033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 3403613 - 3403706
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||||||| | |||||||| | |||||||  || |||||||||||||||| ||| | ||||| | |||||||   |||||||||||    
T  3403613 cgaaattggcaccagatggaatcgaacataagaccttgagatgagcaaactccaagatctcaggccaaccccaaggccaacctcaaatgggtta 3403706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 3794881 - 3794824
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| || ||||| |||||||||  |||||||||||| ||||||    
T  3794881 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagat 3794824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 6953118 - 6953155
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagaccttt 67  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  6953118 cgaaattggcaccagagggaatcgaacctgagaccttt 6953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 26168978 - 26169051
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||| |||||||||||||  |||||||||||||||||||  || |  ||||||||||||||  | |||||||||    
T  26168978 aatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggccaaccctaaatgggtt 26169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 36094774 - 36094729
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagc 75  Q
    ||||||||| |||||||| ||||||||||||||||||  |||||||    
T  36094774 cgaaattgataccagagggaatcgaacctgagaccttgagaggagc 36094729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 25248439 - 25248407
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgaga 62  Q
    |||||||||||||||||| ||||||||||||||    
T  25248439 cgaaattgacaccagagggaatcgaacctgaga 25248407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 27750827 - 27750771
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctt-tggaggagcaaactcc 82  Q
    |||| |||||||||| ||||| ||||||||||||||||||  ||||||||| |||||    
T  27750827 catccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcc 27750771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 35690048 - 35690096
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctt-tggaggagcaaac 79  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||||||    
T  35690048 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaac 35690096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 15360209 - 15360301
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  15360209 cgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 15360301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 28672151 - 28672060
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||||||||||| |||||||||| |||||| | ||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||    
T  28672151 aaattgacaccagagggaatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtta 28672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 654257 - 654349
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || |||| ||||||||||||  |||||||||||    
T  654257 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcagccactaggccaaacccaaatgggtt 654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 9239061 - 9238969
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  9239061 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 9238969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 12591722 - 12591631
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  12591722 gaaattggcacgagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 12591631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 34147432 - 34147337
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| ||||||||| ||||||||||||||| | |||| ||||||||||||||||  || | |||||||||||||||  ||||||||||||||    
T  34147432 cgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttaaa 34147337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 34160048 - 34159953
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| ||||||||| ||||||||||||||| | |||| ||||||||||||||||  || | |||||||||||||||  ||||||||||||||    
T  34160048 cgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttaaa 34159953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 22576150 - 22576060
Alignment:
Q  33 aattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||| ||||||||| ||||||| ||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||||    
T  22576150 aattggcaccagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 22576060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 3222746 - 3222840
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||| ||||||||| ||||||||||||||||| || ||||||||||| ||||||  || | |||||||||||||||  ||||||||||||||    
T  3222746 cgaaattggcaccagagggaatcgaacctgagacctctg-aggagcaaactgcaagatcccaagccaaccactaggccaaccccaaatgggttaaa 3222840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 11448957 - 11448878
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||    
T  11448957 cgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 11448878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 8479398 - 8479308
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatggg 120  Q
    |||||||||||||||||| |||||||||||| | |||  |||||||| ||||||||||  || |||||||||||||||||  |||||||||    
T  8479398 cgaaattgacaccagaggaaatcgaacctgaaatcttaagaggagcacactccaagatcccaagtcaaccactaggccaaccccaaatggg 8479308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 33499561 - 33499467
Alignment:
Q  30 cgaaattgacaccagaggtaatc-gaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||||||||||||| |||| ||||||||||||||  |||||||||||||||||||  || | ||||||| |||||||  ||||||||||||    
T  33499561 cgaaattgacaccagagggaatctgaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgggtta 33499467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 9844022 - 9843929
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    |||||||||||||||| | ||||||||||||||| | |||||||||||||||||||  || | |||||||||| ||||  |||||||| |||||    
T  9844022 aaattgacaccagaggaagtcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatggattaaa 9843929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 11007251 - 11007158
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||||||| | |||||  |||||||||||||||||||||||||||||||||||||||  || | ||||||||||  |||  ||||||||||||    
T  11007251 cgaaattgagagcagagtgaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaatgggtta 11007158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 13753326 - 13753234
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||  ||| ||||||||||||| |||||||||||||||||||||   | | |||||||||||||||  |||||||||||    
T  13753326 cgaaattggcaccagagagaattgaacctgagacctctggaggagcaaactccaagatccaaagccaaccactaggccaaccccaaatgggtt 13753234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 14212981 - 14212921
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  14212981 catcaaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagat 14212921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 21148618 - 21148714
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||||||||| ||| ||||| |||||||| |||||||| || |  |||||||||||||||  || | ||||||||||||||| |||||||||||||    
T  21148618 catcgaaattggcactagagggaatcgaacttgagacctctgaaaaagcaaactccaagatcccaagccaaccactaggccaactccaaatgggtta 21148714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 1345020 - 1344964
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  1345020 gaaattggcaccagagggaatcgaacctgagacctctggaggaacaaactccaagat 1344964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 5360182 - 5360274
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||  ||||| ||||||||||||||||| | ||| |||||||||||||||  || | ||||||| ||||||| ||||||||||||    
T  5360182 cgaaattggcattagagggaatcgaacctgagacctcttgagaagcaaactccaagatcccaagccaaccaccaggccaactccaaatgggtt 5360274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 17706418 - 17706489
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccac 101  Q
    |||||||||||||||| | |||||||| |||||| | |||||||||||||||||||||  || |||||||||    
T  17706418 cgaaattgacaccagaaggaatcgaacttgagacttctggaggagcaaactccaagatcccaagtcaaccac 17706489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 9208338 - 9208281
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| |||||| || ||||||||||||||||||  |||||||||||||||||||    
T  9208338 cgaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagat 9208281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 17081165 - 17081222
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||||||||| |||| ||| |||||| | |||||||||||||||||||||    
T  17081165 cgaaattgacaccagagggaatcaaacttgagacatctggaggagcaaactccaagat 17081222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 21982432 - 21982521
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatggg 120  Q
    ||||||| |||||  || |||||||||| |||||| |||||||||||||| ||||||  || | |||||||||||||||  |||||||||    
T  21982432 gaaattggcaccatcgggaatcgaacctcagacctctggaggagcaaacttcaagatcccaagccaaccactaggccaaccccaaatggg 21982521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 12390511 - 12390465
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagca 76  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  12390511 cgaaattggcaccagagggaatcgaacctgagacctctggaggagca 12390465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 17149567 - 17149624
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||  ||||||||| ||||||||||||||||||  |||||||| ||||||||||    
T  17149567 cgaaattagcaccagagggaatcgaacctgagaccttgagaggagcacactccaagat 17149624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 11840987 - 11840939
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaa 78  Q
    |||||||| ||||||||| |||||| |||||||||| ||||||||||||    
T  11840987 cgaaattggcaccagagggaatcgagcctgagacctctggaggagcaaa 11840939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 31039109 - 31039049
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||| || ||||| |||| ||| ||||| |||||| |||||||||||||||||    
T  31039109 catcgaaattgatactagagggaatcaaacttgagatctttggtggagcaaactccaagat 31039049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 9690749 - 9690824
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactagg 105  Q
    |||||||||||| ||| | |||||||||| |||||| |||| ||||||||||||| || |||   |||||||||||    
T  9690749 cgaaattgacactagaagaaatcgaacctaagacctctggaagagcaaactccaaaatctcaaaccaaccactagg 9690824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 28968153 - 28968210
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||| | ||||  ||||||| ||||||||| | |||||||||||||||||||    
T  28968153 cgaaattgacgctagagagaatcgaatctgagacctctagaggagcaaactccaagat 28968210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 3433603 - 3433639
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaag 85  Q
    ||||||||||||||||||  |||||||||||||||||    
T  3433603 aatcgaacctgagaccttgagaggagcaaactccaag 3433639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 25852300 - 25852208
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  25852300 cgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 25852208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 52983704 - 52983613
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||  |||||||||||    
T  52983704 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgggtt 52983613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 1985925 - 1985830
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||  ||||| ||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||| |||||||||||    
T  1985925 catcgaaattcgcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgggtt 1985830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 13584362 - 13584444
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| || ||| | |||||||||||||||    
T  13584362 catcgaaattgacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaa 13584444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 51535697 - 51535620
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || |||||||||||||||||    
T  51535697 aaattggcaccagagggaatcgaacctgagacctgtggaggagcaaactccaagatcccaagtcaaccactaggccaa 51535620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 32986283 - 32986191
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  32986283 cgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 32986191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 34844869 - 34844961
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||| ||| |  ||||||||||||||  |||||||||||    
T  34844869 cgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaaccccaaatgggtt 34844961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 54127453 - 54127545
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  54127453 cgaaattggcacaagagggaattgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 54127545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 13873406 - 13873497
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||  || |  ||||||||||||||  ||||||||||    
T  13873406 cgaaattggcaccagagggaatcgaacctgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaaccccaaatgggt 13873497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 19660662 - 19660744
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaacaaaaa 131  Q
    |||| |||||||||||| |||||||||||||||||||||  || | ||||||||||||||| ||||||||||||||| |||||    
T  19660662 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaaatgggttaaaaaaaaa 19660744  T

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Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 33696390 - 33696483
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  | ||||||||||    
T  33696390 cgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccctaaatgggtta 33696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 2351099 - 2351019
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaat 110  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||  || | ||||||||||||||||    
T  2351099 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaacttcaagattccaagccaaccactaggccaat 2351019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 27528906 - 27528998
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||  || | ||||||||| |||||  ||| |||||||    
T  27528906 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccagatgggtt 27528998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 40058963 - 40059055
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||  ||||||||||||||||| | |||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  40058963 cgaaattggcaccagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 40059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 7392074 - 7392131
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  7392074 cgaaattggcaccatagggaatcgaacctgagacctttggaggagcaaactccaagat 7392131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 46714459 - 46714386
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  46714459 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 46714386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 22625181 - 22625273
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| | ||||||| ||||||||||||||||| |||||||| ||||||||||||  || | |||||||||||||||   ||||||||||    
T  22625181 cgaaattggctccagagggaatcgaacctgagacctctggaggagtaaactccaagatcccaagccaaccactaggccaacctcaaatgggtt 22625273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 35674852 - 35674944
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| | ||||||| ||||||||||| |||||||||| ||||||||||||||||  || | |||||||| ||||||  |||||||||||    
T  35674852 cgaaattggctccagagggaatcgaacctgtgacctttggaagagcaaactccaagatcccaagccaaccacttggccaaccccaaatgggtt 35674944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 20566436 - 20566341
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgag-acctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||||||||| ||||||||||||  |||| |||||||||||||||||||||  || | |||||||||||||||  |||||||| ||||    
T  20566436 cgaaattggcaccagagggaatcgaacctgatcacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggattaa 20566341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 41621709 - 41621800
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||| ||||||||| |||| ||| |||||||||  ||||||||||||||||||| ||| | |||||| ||||||||  ||||||||||||    
T  41621709 aaattggcaccagaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccattaggccaaccccaaatgggtta 41621800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 49287944 - 49287887
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  49287944 cgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagat 49287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 5609313 - 5609405
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||  ||||||||||||||||  || | ||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  5609313 cgaaattggcaccagagagaatcgaacctgagaccactgaatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 5609405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 12500170 - 12500226
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||| ||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  12500170 gaaattggcaccagagggaatcaaacctgagacctttgaaggagcaaactccaagat 12500226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 34835615 - 34835527
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||||||||||||| |||||||| |||||||||  ||||||||||||| |||||  || | |||||||||| ||||  |||||||    
T  34835615 cgaaattgacaccagagggaatcgaacatgagaccttaagaggagcaaactctaagatcccaagccaaccactagaccaaccccaaatg 34835527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 35229235 - 35229175
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||    
T  35229235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 35229175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 42245819 - 42245744
Alignment:
Q  43 agaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    ||||| ||||||||| ||||||||| ||||||||||||| |||||  || |||||||||||||||||  |||||||    
T  42245819 agagggaatcgaacccgagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatg 42245744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 20078095 - 20078152
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| |||||| || |||| |||||||||||| |||||||||||||||||||||    
T  20078095 cgaaattggcaccagtgggaatcaaacctgagacctctggaggagcaaactccaagat 20078152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 33992712 - 33992655
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||  |||||||||| |||||| |||||||||||||||||||||    
T  33992712 cgaaattggcaccagagagaatcgaacctaagacctctggaggagcaaactccaagat 33992655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 45787816 - 45787902
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    ||||||| || |||||| |||||||||||||| || |||||||||||| ||||||||  || | |||||||||||||||  |||||||    
T  45787816 gaaattggcatcagagggaatcgaacctgagatctctggaggagcaaa-tccaagattccaagccaaccactaggccaaccccaaatg 45787902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 38740936 - 38740890
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagca 76  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||    
T  38740936 cgaaattgacaccagagggaatcgaacctgagaccttaagaggagca 38740890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 13550268 - 13550215
Alignment:
Q  56 cctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||||| | |||||||||||||| |||| ||| |||||||||||||||||    
T  13550268 cctgagacctctagaggagcaaactcccagatctcaagtcaaccactaggccaa 13550215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 43719195 - 43719264
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||||||| |||| ||||||||||||||||||||| |||   |||||||||| ||||  |||||||    
T  43719195 aatcgaacctgaaacctctggaggagcaaactccaagatctcaaaccaaccactagaccaaccccaaatg 43719264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 44343591 - 44343543
Alignment:
Q  39 caccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||||| |||||||| |||| ||||||| |||||||||||||||||    
T  44343591 caccagagggaatcgaacttgagtcctttgggggagcaaactccaagat 44343543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 55961883 - 55961939
Alignment:
Q  60 agacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaa 116  Q
    |||||| |||||||||||||||||||||  || | |||||||||||||||| |||||    
T  55961883 agacctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaa 55961939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 32942456 - 32942377
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| || |||||  |||||||||| | |||| |||||||| |||||||||||| ||| | |||||||||| ||||    
T  32942456 cgaaattggcatcagagagaatcgaaccttaaacctctggaggagtaaactccaagatctcaagccaaccactagaccaa 32942377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 3392776 - 3392822
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagca 76  Q
    ||||||| |||||||||| ||||||||||||||||||  ||||||||    
T  3392776 cgaaattaacaccagaggaaatcgaacctgagaccttgagaggagca 3392822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 19220618 - 19220548
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccac 101  Q
    ||||||| ||| ||||| |||||||||||| |||||  |||||||| |||||||||| | | |||||||||    
T  19220618 gaaattggcactagaggaaatcgaacctgaaaccttgagaggagcacactccaagatcttaagtcaaccac 19220548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 36131621 - 36131715
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||| ||||| ||| ||||||||||||||| | ||||||| | |||||||| ||  || |  |||||||| |||||  |||||||||||||    
T  36131621 cgaaattggcaccatagggaatcgaacctgagacatctggaggaacgaactccaaaatcccaagcaaaccactatgccaaccccaaatgggttaa 36131715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 28791201 - 28791165
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctt 66  Q
    |||||||||||||||||||||| |||||| |||||||    
T  28791201 cgaaattgacaccagaggtaatggaacctaagacctt 28791165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 38869860 - 38869804
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctt-tggaggagcaaactccaagat 87  Q
    |||||| ||||||||| ||||||||||||||||||  ||||||||| ||||| ||||    
T  38869860 aaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagat 38869804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 8518 - 8611
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  ||||||||||||    
T  8518 cgaaattggcaccagagataatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 8611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 97477 - 97569
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||  || | |||||||||||||||  |||||||||||    
T  97477 cgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatgggtt 97569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 5394106 - 5394046
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5394106 catcgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaagat 5394046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 15038045 - 15037953
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||  |||||||||||    
T  15038045 cgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaaccccaaatgggtt 15037953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 4852635 - 4852551
Alignment:
Q  39 caccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||| |||  ||||||| ||||    
T  4852635 caccagagggaatcgaacctgagacctttggaggagcaaactccaagattccaagtcaaccactaggtcaaccccaaatgagtta 4852551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 17324852 - 17324764
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||| ||   |||||||||||||||  |||||||    
T  17324852 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaaccccaaatg 17324764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 33827684 - 33827776
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||| |||||||||  || | |||||||||||||||  |||||||||||    
T  33827684 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaaccccaaatgggtt 33827776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 14946864 - 14946774
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    ||||||||||||||||  |||||||||| | |||||  |||||||||||| |||||| ||| ||||||||||||||||| |||||||||||    
T  14946864 gaaattgacaccagagaaaatcgaacctaaaaccttgagaggagcaaacttcaagatctcaagtcaaccactaggccaactccaaatgggt 14946774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 41314078 - 41313984
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  ||   ||||||||| | |||  |||||||||||||    
T  41314078 cgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactacggcaaccccaaatgggttaa 41313984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 25293252 - 25293160
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||  || |||||||||||| ||||   ||||||||||    
T  25293252 cgaaattggcaccagagggaatcgaacctgagacctctcgaggagcaaactccaagatcccaagtcaaccactagaccaacctcaaatgggtt 25293160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 44946164 - 44946256
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||| ||||  |||||||||||    
T  44946164 cgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 44946256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 6714411 - 6714485
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||| |||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||| ||||||||||||    
T  6714411 aatcaaacctgagacctctggaggagcaaactccaagatctcaagccaaccattaggccaatcccaaatgggtta 6714485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 44976267 - 44976353
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||  || | |||||||||||||||  |||||||    
T  44976267 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaggccaaccccaaatg 44976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 10582101 - 10582158
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  10582101 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagat 10582158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 11941323 - 11941415
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaa 124  Q
    |||||| ||||| ||| ||| ||||||||||||| |||||||||||||||||||||  || | |||||||||| ||||  |||||||||||||    
T  11941323 aaattggcaccatagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggttaa 11941415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 18976548 - 18976628
Alignment:
Q  42 cagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  18976548 cagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 18976628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 32845177 - 32845085
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||  || |  ||| ||||||||||  |||||||||||    
T  32845177 cgaaattggcaccagagggaatcgaacctgaaacttttggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggtt 32845085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 8192466 - 8192553
Alignment:
Q  34 attgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||| ||||||||| ||||||||||||||||||  |||||||| ||||||||||  || | |||||||||||||||  ||||||||||    
T  8192466 attggcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaatgggt 8192553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 36242423 - 36242480
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||| | ||||||    
T  36242423 cgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaatttcaagat 36242480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 36390679 - 36390769
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||||||  ||||  ||   |||||||||||||||  |||||||||||    
T  36390679 cgaaattggcaccagaggaaatcgaacctgagacctttggagaagcaaactc--agatcccaaaccaaccactaggccaaccccaaatgggtt 36390769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 43374436 - 43374493
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||    
T  43374436 cgaaattggcaccagagggaatcgaacctgagacctctgaaggagcaaactccaagat 43374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 27290674 - 27290598
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggc 106  Q
    |||||||| ||||  ||| ||||||||||||||||| |||||||||||||||||||||  || | ||||||||||||    
T  27290674 cgaaattggcaccgaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggc 27290598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 32526215 - 32526291
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggttaaa 125  Q
    ||||||||||||||||||  |||||||||||| ||||||  ||  |||||||||| ||||| |||||||||||||||    
T  32526215 aatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccactaagccaactccaaatgggttaaa 32526291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 19054103 - 19054021
Alignment:
Q  38 acaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatggg 120  Q
    |||||||| | |||| ||||||||||||||||||||||| |||||||||| ||| | ||| ||||||||| |  |||||||||    
T  19054103 acaccagaaggaatcaaacctgagacctttggaggagcagactccaagatctcaagccaatcactaggcccaccccaaatggg 19054021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 4567548 - 4567637
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgg 119  Q
    |||||||| ||||||||| ||||||||||||||| | || ||||||||||| ||||||  || | |||| ||||||||||  ||||||||    
T  4567548 cgaaattggcaccagaggaaatcgaacctgagacttctgaaggagcaaacttcaagatcccaagccaactactaggccaaccccaaatgg 4567637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 24196090 - 24195997
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||  ||||||||| |||||||||||| |||| ||||||||| ||| |||| ||  || | |||||||||||||||  ||||||||||||    
T  24196090 cgaaatttgcaccagagggaatcgaacctgaaacctctggaggagcgaaccccaaaatcccaagccaaccactaggccaaccccaaatgggtta 24195997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 29361639 - 29361583
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||    
T  29361639 cgaaattgacatcagaggaaatcga-cctgagatctttggaggagcaaactccaagat 29361583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 35171875 - 35171831
Alignment:
Q  41 ccagaggtaatcgaacctgagacctttggaggagcaaactccaag 85  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||    
T  35171875 ccagagggaatcgaacctgagacctctggaggagcaaactccaag 35171831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 4618796 - 4618875
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    |||||||| |||||| || |||||||||||| |||||  |||||||| ||||||||||  || | |||||||||||||||    
T  4618796 cgaaattggcaccaggggaaatcgaacctgaaaccttgagaggagcatactccaagattccaagccaaccactaggccaa 4618875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 40997484 - 40997535
Alignment:
Q  53 gaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactag 104  Q
    |||| ||||||||||||||||||||||||||||||  || ||||||||||||    
T  40997484 gaacatgagacctttggaggagcaaactccaagatcccaagtcaaccactag 40997535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 41329927 - 41329872
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||| ||||||||| ||||||| |||| |||||||||||||||||||| |||||    
T  41329927 aaattggcaccagagggaatcgaatctgaaacctttggaggagcaaactctaagat 41329872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 44610140 - 44610090
Alignment:
Q  50 atcgaacctgagacctttggaggagcaaactccaagatatcatgtcaacca 100  Q
    ||||||||||||||||||||| |||||||||||||||| ||| | ||||||    
T  44610140 atcgaacctgagacctttggaagagcaaactccaagatctcaagccaacca 44610090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 1191599 - 1191542
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||||  || ||||| || |||||||||||||| |||||||||||||||||||||    
T  1191599 cgaaattggtactagagggaaacgaacctgagacctctggaggagcaaactccaagat 1191542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 3405265 - 3405354
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||| ||||||||| ||||||||||| ||||||  || ||||| | ||||||||  || ||||||||||||| ||| || ||||||||    
T  3405265 aaattggcaccagagggaatcgaacctgtgaccttgagatgagcacattccaagatcccaagtcaaccactaggtcaactcaaaatgggt 3405354  T

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Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 8258971 - 8258926
Alignment:
Q  42 cagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||    
T  8258971 cagagggaatcgaacctgagacatctggaggagcaaactccaagat 8258926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 23787119 - 23787196
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggcc 107  Q
    |||||||| ||||||||| |||| ||||||||||||||| || |||||| ||||| || |||   |||||||||||||    
T  23787119 cgaaattggcaccagagggaatcaaacctgagacctttgtagaagcaaattccaaaatttcaaaccaaccactaggcc 23787196  T

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Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 27269468 - 27269553
Alignment:
Q  37 gacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    ||||||||||| |||| ||||| | |||||| ||||||||||||| |||||  || | ||||||||| |||||  |||||||||||    
T  27269468 gacaccagagggaatcaaacctaaaacctttagaggagcaaactcgaagatcccaagccaaccactatgccaaccccaaatgggtt 27269553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 30466941 - 30467034
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    |||||||| || |||||  ||||||||||||||||| | ||||| |||||||||| ||  ||   |||||||||||||||  ||||||||||||    
T  30466941 cgaaattggcagcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaatgggtta 30467034  T

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Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 2140594 - 2140634
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttgga 70  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  2140594 cgaaattgacaccagagggaatcgaacctgagacctctgga 2140634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 19849922 - 19849862
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||| |||||||||| | | | |||||||| | ||||||||||||||||||||||||||||    
T  19849922 catcaaaattgacactaaaaggaatcgaacttaagacctttggaggagcaaactccaagat 19849862  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 34516538 - 34516576
Alignment:
Q  49 aatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  34516538 aatcgaacctgaaacctctggaggagcaaactccaagat 34516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 29698233 - 29698176
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||||||||||||| |||  ||| |||||||||  |||||||||| ||||||||    
T  29698233 cgaaattgacaccagaggaaataaaacttgagaccttgagaggagcaaattccaagat 29698176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 21195655 - 21195711
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctt-tggaggagcaaactcc 82  Q
    |||| |||||||||| ||||| ||||||||||||||||||  ||||||||| |||||    
T  21195655 catccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcc 21195711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 41755 - 41848
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||||||  || ||||| ||||||||||||||||| |||||||||||||||||||||  || |||||||||||||||||  ||||||||||||    
T  41755 cgaaattggaacaagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtta 41848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 52982 - 53073
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggt 121  Q
    |||||||| ||||||||| ||||||||||||  ||| |||||||||||||||||||||  || | |||||||||||||||| ||||||||||    
T  52982 cgaaattggcaccagagggaatcgaacctgaagcctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgggt 53073  T

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Target: scaffold0049 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 66846 - 66756
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||  || | |||||||||| ||||| |||||||||||    
T  66846 aaattggcaccagaaggaatcgaacgtgagacctttggaggagcaaactccaagatcccaagccaaccactagaccaatcccaaatgggtt 66756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 1167 - 1255
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||    
T  1167 cgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 10804 - 10892
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||    
T  10804 cgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 10892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 9410 - 9498
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||    
T  9410 cgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 12111 - 12199
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatg 118  Q
    |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||    
T  12111 cgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 12199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 15077 - 14985
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||  ||||||||| ||| ||||||||||||| |||||||||||||||||||||  || | |||||||||||||||  |||||||||||    
T  15077 cgaaattagcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaggccaaccactaggccaaccccaaatgggtt 14985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 40411 - 40319
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||   | | |||||||||||||||  |||||||||||    
T  40411 cgaaattggcaccagagggaatcgaacctgagacctctgaaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggtt 40319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 66 - 148
Alignment:
Q  27 catcgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaa 109  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||| ||||||||||||||||  || | |||||||||||||||    
T  66 catcgaaattgacataagagggaatcgaacctgagacctctggacgagcaaactccaagatcacaagccaaccactaggccaa 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 161895 - 161838
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  161895 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagat 161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 12883 - 12958
Alignment:
Q  48 taatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtta 123  Q
    ||||||||||||||| || ||||||||| |||||||||||  || |||||||||||||||||| |||||| |||||    
T  12883 taatcgaacctgagatctctggaggagcgaactccaagatcccaagtcaaccactaggccaatcccaaataggtta 12958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 8290 - 8347
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    |||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  8290 cgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagat 8347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 7420 - 7512
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||||| |||| |||| |||||||||||||| || |||||||||||||||||||||  || | |||| ||||||||||  |||||| ||||    
T  7420 cgaaattggcaccggagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaactactaggccaaccccaaataggtt 7512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 20307 - 20251
Alignment:
Q  31 gaaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagat 87  Q
    ||||||| ||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  20307 gaaattggcaccagagggaatcaaacctgagacctttgaaggagcaaactccaagat 20251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 39178 - 39131
Alignment:
Q  30 cgaaattgacaccagaggtaatcgaacctgagacctttggaggagcaa 77  Q
    |||||||| ||||||||| |||||||| |||||||| |||||||||||    
T  39178 cgaaattggcaccagagggaatcgaacttgagacctctggaggagcaa 39131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 25331 - 25365
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctt 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  25331 aaattgacaccagagataatcgaacctgagacctt 25365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 27860 - 27770
Alignment:
Q  32 aaattgacaccagaggtaatcgaacctgagacctttggaggagcaaactccaagatatcatgtcaaccactaggccaattccaaatgggtt 122  Q
    |||||| ||||| ||| ||||||||| ||||||||  |||||||||||||||| ||  ||   |||||||||| ||||  |||||||||||    
T  27860 aaattggcaccacagggaatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatgggtt 27770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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