View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11698_high_7 (Length: 361)
Name: NF11698_high_7
Description: NF11698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11698_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 316
Target Start/End: Complemental strand, 48797927 - 48797638
Alignment:
| Q |
19 |
tatctaaattaagaagctttagcttataacacaaatagtcaaatactaatcttttcgtctatatgaatatgcagattttgcaatagaatgagataaaatt |
118 |
Q |
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| T |
48797927 |
tatctaaattaagaagctttagcttataacacaaata--------ctaatcttttcgtctatatgaatatgcagattttgcaatagaatgagataaaatt |
48797836 |
T |
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| Q |
119 |
atagatcatttattttttatataagatattaagtggagggcttgtattaattgtagctaaaatcaagtctagtatccaaaagtaatgctaattaccctca |
218 |
Q |
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| T |
48797835 |
atagatcatttattttttatataagatattaagtggagggcttgtattaattgtagctaaaatcaagtctagtatccaaaagtaatgctaattaccctca |
48797736 |
T |
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| Q |
219 |
tactacaaaatgaaattctaaaagccaatataatatcggtagtctacactacatatcaagtagaacatatgataaagaattaataagtaactcctttc |
316 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48797735 |
tactacaaattgaaattctaaaagccaatataatatcggtagtctacactacatatcaagtagaacatatgataaagaattaataagtaactcctttc |
48797638 |
T |
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