View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11698_low_2 (Length: 423)

Name: NF11698_low_2
Description: NF11698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11698_low_2
NF11698_low_2
[»] chr4 (20 HSPs)
chr4 (7-391)||(4344551-4344935)
chr4 (7-391)||(4360982-4361366)
chr4 (7-391)||(4123731-4124115)
chr4 (98-388)||(4320502-4320792)
chr4 (35-391)||(4335250-4335606)
chr4 (93-383)||(4133292-4133591)
chr4 (93-353)||(6498404-6498664)
chr4 (99-355)||(6621391-6621647)
chr4 (93-391)||(7885269-7885567)
chr4 (93-350)||(6728352-6728609)
chr4 (93-326)||(6752930-6753163)
chr4 (93-326)||(6675673-6675906)
chr4 (93-350)||(6815416-6815673)
chr4 (93-339)||(6545326-6545572)
chr4 (93-308)||(6588074-6588289)
chr4 (99-326)||(6651037-6651264)
chr4 (103-350)||(6837220-6837467)
chr4 (93-391)||(6758629-6758927)
chr4 (94-238)||(6532111-6532255)
chr4 (93-326)||(6822660-6822894)
[»] chr6 (28 HSPs)
chr6 (39-391)||(5689983-5690335)
chr6 (87-391)||(5128289-5128593)
chr6 (93-379)||(5066572-5066858)
chr6 (95-380)||(5344777-5345062)
chr6 (13-379)||(5096625-5096991)
chr6 (93-389)||(5181805-5182101)
chr6 (16-351)||(5425855-5426190)
chr6 (93-391)||(5073786-5074084)
chr6 (93-379)||(5102492-5102778)
chr6 (95-391)||(5176644-5176940)
chr6 (40-391)||(5354439-5354790)
chr6 (93-391)||(5447492-5447790)
chr6 (95-391)||(5278471-5278767)
chr6 (16-379)||(5157429-5157792)
chr6 (93-373)||(5370494-5370774)
chr6 (93-391)||(5433940-5434238)
chr6 (93-391)||(5383231-5383529)
chr6 (93-351)||(5350339-5350591)
chr6 (93-387)||(5284267-5284561)
chr6 (95-351)||(5396895-5397151)
chr6 (102-388)||(5257221-5257507)
chr6 (106-316)||(5281280-5281490)
chr6 (193-391)||(5447062-5447260)
chr6 (95-216)||(5243793-5243914)
chr6 (106-316)||(5179521-5179731)
chr6 (258-379)||(5243910-5244031)
chr6 (98-148)||(31059813-31059863)
chr6 (93-122)||(2938282-2938311)
[»] chr5 (5 HSPs)
chr5 (93-391)||(8877514-8877812)
chr5 (97-181)||(12599054-12599138)
chr5 (97-211)||(20838717-20838831)
chr5 (97-211)||(20812362-20812476)
chr5 (95-163)||(30417953-30418021)
[»] scaffold0294 (1 HSPs)
scaffold0294 (93-379)||(8778-9064)
[»] chr7 (3 HSPs)
chr7 (87-383)||(36213701-36213997)
chr7 (92-391)||(18935291-18935590)
chr7 (81-391)||(34724452-34724762)
[»] chr2 (1 HSPs)
chr2 (95-383)||(22584094-22584382)
[»] chr3 (10 HSPs)
chr3 (186-391)||(47986823-47987028)
chr3 (186-391)||(47996110-47996315)
chr3 (186-391)||(48005397-48005602)
chr3 (186-391)||(48014682-48014887)
chr3 (93-155)||(47986750-47986812)
chr3 (93-155)||(47996037-47996099)
chr3 (93-155)||(48005324-48005386)
chr3 (93-155)||(48014609-48014671)
chr3 (95-158)||(6905806-6905869)
chr3 (95-206)||(32411083-32411194)
[»] scaffold0286 (1 HSPs)
scaffold0286 (99-326)||(6629-6856)
[»] scaffold0813 (1 HSPs)
scaffold0813 (99-326)||(4710-4937)
[»] scaffold0373 (1 HSPs)
scaffold0373 (103-350)||(9636-9883)
[»] scaffold0552 (1 HSPs)
scaffold0552 (93-350)||(8163-8420)
[»] chr8 (11 HSPs)
chr8 (96-328)||(3286516-3286748)
chr8 (95-161)||(3407323-3407389)
chr8 (97-319)||(31175824-31176046)
chr8 (97-206)||(3262629-3262737)
chr8 (95-188)||(3391536-3391629)
chr8 (98-161)||(3314993-3315056)
chr8 (95-188)||(3364277-3364370)
chr8 (98-186)||(3325003-3325091)
chr8 (97-188)||(3398522-3398613)
chr8 (97-157)||(7164654-7164714)
chr8 (95-161)||(3267198-3267264)
[»] scaffold0468 (1 HSPs)
scaffold0468 (95-158)||(6146-6209)


Alignment Details
Target: chr4 (Bit Score: 373; Significance: 0; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 7 - 391
Target Start/End: Complemental strand, 4344935 - 4344551
Alignment:
Q  7 gatatatcatgggaaatactatttgttgcatttaaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgaca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4344935 gatatatcatgggaaatactatttgttgcatttaaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgaca 4344836  T
Q  107 tccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaaggg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4344835 tccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaaggg 4344736  T
Q  207 tacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagataga 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4344735 tacttttgttatagcagtgttatttgcaatcagagtggttaaagattccatttgttccaagtcctcttccaacttgtcaatcattaaacatccagataga 4344636  T
Q  307 atgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4344635 atgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatttttcaaatttatcaaaagaa 4344551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 7 - 391
Target Start/End: Complemental strand, 4361366 - 4360982
Alignment:
Q  7 gatatatcatgggaaatactatttgttgcatttaaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgaca 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4361366 gatatatcatgggaaatactatttgttgcatttaaaaaaacaagggatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgaca 4361267  T
Q  107 tccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaaggg 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  4361266 tccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgatcttacaattgaaaaggg 4361167  T
Q  207 tacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagataga 306  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  4361166 tacttttgttataccagtgttatttgcaatcagagtggttaaagattccatttgttccaagtcctcttccaacgtgtcaatcattgaacatccagataga 4361067  T
Q  307 atgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4361066 atgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaa 4360982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 7 - 391
Target Start/End: Original strand, 4123731 - 4124115
Alignment:
Q  7 gatatatcatgggaaatactatttgttgcatttaaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgaca 106  Q
    |||| |||||||||||||||||||| |||||  ||||||||||| |||||||| ||  ||| |||||||| || ||| | ||||  |||||||||| |||    
T  4123731 gatagatcatgggaaatactatttgatgcatgcaaagaaacaagggatgacattccgacagctgtttgaacagcgggtgggagattatttgttggtaaca 4123830  T
Q  107 tccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaaggg 206  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  4123831 tccaagacgaaatgatagaaggaaacacatcacgagagaatccttcatatccacacagagaaataaatccaatgctttttgaccttactaccgaaaaggg 4123930  T
Q  207 tacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagataga 306  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4123931 cacttttgttatagcagtattatttgcaatcagagtggttaaagattccatttgttccaactcctcttccaacttgtcaatcattaaacatcccgataga 4124030  T
Q  307 atgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  4124031 atgagagttttcagagatttcaacgaataaatgtttcttggaaggttagaaaggctagtacaatctttcaaatttatcaaaagaa 4124115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 98 - 388
Target Start/End: Original strand, 4320502 - 4320792
Alignment:
Q  98 ttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactac 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||     
T  4320502 ttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgaccttactaa 4320601  T
Q  198 tgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacat 297  Q
    ||||||||| |||||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  4320602 tgaaaagggaacttttgttataccagtattatttgcaatcagggtggttaaagattccatttgttccaagtcctcttccaacttgtcaatcattaaacat 4320701  T
Q  298 ccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaa 388  Q
    || |||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4320702 cccgatagaatgagagtattcagagttttcaacgtatagatgtttcttggaaggctacaaaggctaatacaatctttcaaatttatcaaaa 4320792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 35 - 391
Target Start/End: Complemental strand, 4335606 - 4335250
Alignment:
Q  35 catttaaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgacatccaagaccaaatgatagaaggaaacac 134  Q
    |||| ||||||||| | | |||||| ||| ||| |||||||| ||  || |||| |  ||||||||||  ||||||||||||||| ||||||||||||||    
T  4335606 cattcaaagaaacatggggtgacattccaacagctgtttgaacagctggtgagacattatttgttggtaccatccaagaccaaattatagaaggaaacac 4335507  T
Q  135 atcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaagggtacttttgttatagcagtgttatttgca 234  Q
    |||||| |||||||||||||| ||||||||||| ||| | ||||||| ||||||| |||||||||||||||| |||||||||||| ||||||||| |||     
T  4335506 atcacgggagaatccttcatacccacacaaagagatatagccaatgctttttgactttactactgaaaagggcacttttgttataccagtgttatctgcc 4335407  T
Q  235 atcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagatagaatgagagttttcagagatttcaacgtat 334  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  4335406 atgagagtggttaaagattccatttgttccaagtcctcttccaacttgtcaatctttaaacatcctgatagaatgagagttttcagagacttcaacgtat 4335307  T
Q  335 agatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4335306 agatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaa 4335250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 93 - 383
Target Start/End: Original strand, 4133292 - 4133591
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatcc----ttca------ta-tccacacaaagaaataaatccaatgc 181  Q
    |||||||||||||||||||| |  ||||||||||||||| || ||||||||| ||||    ||||      || |||||| | ||||||| || ||||||    
T  4133292 atttgttggtgacatccaagtctgaatgatagaaggaaatacttcacgtgagtatcccttattcaatgctttactccacaaagagaaatatattcaatgc 4133391  T
Q  182 gttttgaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaactt 281  Q
     |||||||||| | ||||||||||| ||||||||||| ||||||||||   ||||||||||||||||||| |||||||||||||| ||||  ||||| ||    
T  4133392 tttttgaccttgcgactgaaaagggcacttttgttattgcagtgttatccacaatcagagtggttaaagactccatttgttccaagtcct--tccaattt 4133489  T
Q  282 gtcaatcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaattt 381  Q
    |||||| |||||||| ||||| ||||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||| ||||||||||||    
T  4133490 gtcaataattaaacagccagaaagaataagagttttcagagatttcaacgaatagatggttcttggaaggttacgaaggctagtacagtctttcaaattt 4133589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 93 - 353
Target Start/End: Original strand, 6498404 - 6498664
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||| ||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||| | ||||||  ||||||||  ||||||||| |||||| |||    
T  6498404 atttgatggtgacatccaagaccgaatgagagaaggaaatacatcacgtgaaaatcctttaaatccacctaaagaaatgtatccaatgctttttgatctt 6498503  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||| ||||||||| ||||||||||||||||| ||||  |||||||  || || || || ||||| |||||||  ||||| ||||| ||||||||| |      
T  6498504 actattgaaaagggaacttttgttatagcagtcttatccgcaatcaaggttgtcaatgattccatctgttccacgtcctcctccaatttgtcaatcttgg 6498603  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggtt 353  Q
    |||||||||| ||||| | |||||  |||||||| ||  |||||||| |||| ||||||||    
T  6498604 aacatccagaaagaatcaaagtttctagagattttaatttatagatgcttctcggaaggtt 6498664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 355
Target Start/End: Original strand, 6621391 - 6621647
Alignment:
Q  99 tggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactact 198  Q
    ||||||||||||||| | ||| |  |||||||||||||| ||||| ||||||||| ||||||| ||||||||| ||||||||  ||| || | ||||| |    
T  6621391 tggtgacatccaagagcgaataagtgaaggaaacacatcccgtgaaaatccttcaaatccacataaagaaatatatccaatgtttttagatcgtactatt 6621490  T
Q  199 gaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatc 298  Q
    |||||||| ||||||||||||||||| ||||  |||||||  || || || || ||||| |||||||| ||||| ||||| |||||||||||  ||||||    
T  6621491 gaaaagggaacttttgttatagcagtcttatccgcaatcaaggttgtcaatgattccatctgttccaagtcctcctccaatttgtcaatcatggaacatc 6621590  T
Q  299 cagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttac 355  Q
    | || ||||| | |||||  |||||||| ||  |||||||| |||||||||| ||||    
T  6621591 ctgaaagaattaaagtttctagagattttaatttatagatgcttcttggaagtttac 6621647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 93 - 391
Target Start/End: Original strand, 7885269 - 7885567
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||||||| |||| |||||||  ||| ||||||||||||||   |||||   |||||| ||| ||||| | |||||||||| |||||| |||||| |||    
T  7885269 atttgttggagacagccaagactgaataatagaaggaaacactctacgtgcagatcctttataaccacatagagaaataaatgcaatgctttttgatctt 7885368  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    ||||||| |||||| ||| |||| |||||||||| ||  |||| ||  ||||||||||| | ||||||||| |  |||||||| |||||||||||  ||     
T  7885369 actactgcaaagggcactcttgtgatagcagtgtcatccgcaaccaaggtggttaaagatttcatttgttctatatcctcttctaacttgtcaatttttg 7885468  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
     ||||||||| |||||||| |||||||| || |  ||| |||| ||| | |||||||| |  | |||||   ||||||||||||||||||| |||||||    
T  7885469 tacatccagacagaatgagtgttttcagcgagtctaacttatatatgctccttggaagttctcgaaggcctgtacaatctttcaaatttattaaaagaa 7885567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 93 - 350
Target Start/End: Complemental strand, 6728609 - 6728352
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||| ||| ||||||||||||||||  | |||||| || ||||||||||| ||||||||| | ||||  ||||||||| ||||||| | |||  | |||    
T  6728609 atttgatggcgacatccaagaccaaacaagagaagggaatacatcacgtgaaaatccttcaaagccacgaaaagaaatatatccaatacttttcaatctt 6728510  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||| |||||| || ||||||||||||||||| ||||  |||||||  || || || || ||||| |||||||  ||||| ||||| |||||||||||      
T  6728509 actattgaaaatggcacttttgttatagcagtcttatccgcaatcaaggttgtcaatgattccatctgttccacgtcctcctccaatttgtcaatcatgg 6728410  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaag 350  Q
    ||||||| || ||||| | |||||  |||||||| ||| | |||||||||||||||||    
T  6728409 aacatcctgaaagaatcaaagtttctagagattttaacttgtagatgtttcttggaag 6728352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 93 - 326
Target Start/End: Complemental strand, 6753163 - 6752930
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||| ||| || |||||||||| ||||| |||||| || ||||||||||| ||||||||| | ||||  ||||||||| ||||||||| |||  | |||    
T  6753163 atttgatggcgatatccaagaccgaatgagagaagggaatacatcacgtgaaaatccttcaaagccacgaaaagaaatatatccaatgcttttcaatctt 6753064  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||| ||||||||| ||||||||||||||||| ||||  |||||||  ||  | || || ||||| |||||||| ||||| ||||| |||||||||||      
T  6753063 actattgaaaagggcacttttgttatagcagtcttatccgcaatcaaggtaatcaatgattccatctgttccaagtcctcctccaatttgtcaatcatgg 6752964  T
Q  293 aacatccagatagaatgagagttttcagagattt 326  Q
    |||||||||| ||||| | |||||  ||||||||    
T  6752963 aacatccagaaagaatcaaagtttctagagattt 6752930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 93 - 326
Target Start/End: Complemental strand, 6675906 - 6675673
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||| ||||||||||||||||  ||||| ||||||||| |||||| |||| ||||||||| | ||||| ||||| || ||||||||||  ||||| |||    
T  6675906 atttgatggtgacatccaagacttaatgagagaaggaaatacatcaagtgaaaatccttcaaagccacataaagagatgaatccaatgctctttgatctt 6675807  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||| ||||||||| |||||| ||||||| || |||| ||||||||  || || |  || ||||| |||||||  ||||| ||||| ||||||||| |      
T  6675806 actattgaaaagggaacttttattatagctgttttatctgcaatcaaggttgtcattgattccatctgttccacgtcctcctccaatttgtcaatcttgg 6675707  T
Q  293 aacatccagatagaatgagagttttcagagattt 326  Q
    |||||||||| ||||| | |||||  ||||||||    
T  6675706 aacatccagaaagaatcaaagtttctagagattt 6675673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 93 - 350
Target Start/End: Complemental strand, 6815673 - 6815416
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||| ||||||||||||||| | || || ||||| ||| ||||||||||  ||||||||| | ||||  ||||||||| ||||||||| |||  | |||    
T  6815673 atttgatggtgacatccaagagcgaacgagagaagaaaatacatcacgtgtaaatccttcaaagccacctaaagaaatatatccaatgcttttcaatctt 6815574  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    || |||||||| || |||||| |||||||||| ||||  |||||||  ||  | ||||| ||||| |||||||| ||||| ||||| || ||||||||      
T  6815573 accactgaaaatggcactttttttatagcagtcttatcagcaatcaaggtaatcaaagattccatctgttccaagtcctcctccaatttttcaatcatgg 6815474  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaag 350  Q
    |||||||||| ||||| | |||||  |||||||| ||  ||||| || ||||||||||    
T  6815473 aacatccagaaagaatcaaagtttctagagattttaatttatagttgcttcttggaag 6815416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 339
Target Start/End: Original strand, 6545326 - 6545572
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||| |||||||| |||||||| ||||| |||||| || ||||||||||| ||||||||| | ||||  ||||||||| ||||||||| |||  | ||     
T  6545326 atttgatggtgacagccaagaccgaatgagagaagggaatacatcacgtgaaaatccttcaaagccacgaaaagaaatatatccaatgcttttcaatcta 6545425  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||| ||||||||| ||||||||||||||||| ||||  |||||||  ||  | || || ||||| |||||||| ||||| ||||| |||| |||| |      
T  6545426 actattgaaaagggcacttttgttatagcagtcttatccgcaatcaaggttttcaacgattccatctgttccaagtcctcctccaatttgttaatcttgg 6545525  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatg 339  Q
    ||||||| || ||||| | |||||  |||||||| ||  ||||||||    
T  6545526 aacatcccgaaagaatcaaagtttctagagattttaatttatagatg 6545572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 93 - 308
Target Start/End: Original strand, 6588074 - 6588289
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||| ||| ||||||||||||| ||||| |||||| || ||||||||||| ||||||||| | ||||| ||||||||| ||||||||| |||   ||||    
T  6588074 atttgatggcgacatccaagaccgaatgagagaagggaatacatcacgtgaaaatccttcaaagccacaaaaagaaatatatccaatgcttttcatcctt 6588173  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||| |||||| || |||||||| || ||||| ||||  |||||||  ||  | || || ||||| |||||||| ||||| ||||  || ||||||||      
T  6588174 actattgaaaatggcacttttgtgatggcagtcttatcggcaatcaaggtaatcaacgattccatctgttccaagtcctcctccagtttttcaatcatag 6588273  T
Q  293 aacatccagatagaat 308  Q
    |||||||||| |||||    
T  6588274 aacatccagaaagaat 6588289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 326
Target Start/End: Complemental strand, 6651264 - 6651037
Alignment:
Q  99 tggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactact 198  Q
    ||||||||||||||||| || || | ||||||| ||||| ||||| ||||||||| | ||||| | ||||||| ||||||||  | || | ||||||| |    
T  6651264 tggtgacatccaagaccgaacgagaaaaggaaatacatctcgtgaaaatccttcaaagccacatagagaaatatatccaatgtttcttaatcttactatt 6651165  T
Q  199 gaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatc 298  Q
    ||||| || ||||||||||||||||| ||||  |||||||  ||  | || || ||||| |||||||| ||||| ||||| ||||||||| |  ||||||    
T  6651164 gaaaacggcacttttgttatagcagtcttatccgcaatcaaggttttcaatgattccatctgttccaagtcctcctccaatttgtcaatcttggaacatc 6651065  T
Q  299 cagatagaatgagagttttcagagattt 326  Q
    |||| ||||| | |||||  ||||||||    
T  6651064 cagaaagaatcaaagtttctagagattt 6651037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 350
Target Start/End: Complemental strand, 6837467 - 6837220
Alignment:
Q  103 gacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaa 202  Q
    ||||||||||| | ||||| |||||| || ||||||||||| ||||||||| | || |  ||||||||| ||||||||  |||    ||||||| |||||    
T  6837467 gacatccaagagcgaatgagagaagggaatacatcacgtgaaaatccttcaaagccgcttaaagaaatatatccaatgtttttcattcttactattgaaa 6837368  T
Q  203 agggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccaga 302  Q
    | || |||||| |||||||||| |||| ||||||||  ||  | | ||| ||||| ||| |||| ||||| ||||| |||||||||||  ||||||||||    
T  6837367 atggaactttttttatagcagtcttatctgcaatcaaggtaataagagattccatctgtaccaaatcctcctccaatttgtcaatcatggaacatccaga 6837268  T
Q  303 tagaatgagagttttcagagatttcaacgtatagatgtttcttggaag 350  Q
     ||||| | |||||  |||||||| || ||||||||| |||| |||||    
T  6837267 aagaatcaaagtttgtagagattttaatgtatagatgcttctcggaag 6837220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 93 - 391
Target Start/End: Complemental strand, 6758927 - 6758629
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||||||||||||||| ||||| ||||| | ||||||| | ||||||||  ||||||||| | ||||||| ||||||||||| ||||| |||| | |||    
T  6758927 atttgttggtgacatcctagaccgaatgacaaaaggaaatatatcacgtgcaaatccttcaaagccacacagagaaataaatctaatgctttttaatctt 6758828  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    | || ||||| ||||||||  ||||| ||||| ||||  |||||||  ||  | || || ||||| |||||||| ||||| ||||| ||||||||| | |    
T  6758827 aatattgaaatgggtacttccgttattgcagtcttatccgcaatcaatgtaatcaatgattccatctgttccaagtcctcctccaatttgtcaatcttga 6758728  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
      ||||| || ||||| | |||||  |||||||| || || |||||| |||| ||||| || | ||| |  || || ||| |||||||||||| |||||    
T  6758727 tgcatcctgagagaatcaaagtttctagagattttaatgtttagatgcttctcggaagtttcctaagacctatgcagtctgtcaaatttatcagaagaa 6758629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 94 - 238
Target Start/End: Original strand, 6532111 - 6532255
Alignment:
Q  94 tttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctta 193  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||  ||| ||||||||| | || || | ||||||| || |||||  |||||  ||||    
T  6532111 tttgatggtgacatccaagaccgaatgatagaaggaaatacatcatttgaaaatccttcaaagccgcaaatagaaatatattcaatgttttttggtctta 6532210  T
Q  194 ctactgaaaagggtacttttgttatagcagtgttatttgcaatca 238  Q
    ||| ||||||||| |||| || ||||||||| ||||  |||||||    
T  6532211 ctattgaaaaggggacttctgctatagcagtcttatccgcaatca 6532255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 326
Target Start/End: Complemental strand, 6822894 - 6822660
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||| ||| || |||||||| | ||||| |||||| || ||||||||||| ||||||||| | || || ||||||||| ||||||||| |||  | |||    
T  6822894 atttgatggcgatatccaagagcgaatgagagaagggaatacatcacgtgaaaatccttcaaagccgcataaagaaatatatccaatgcttttcaatctt 6822795  T
Q  193 actactgaaaagggtac-ttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatt 291  Q
    |||| |||||| || || |||| |||| ||||| ||||  |||||||  ||  | || |  ||||| ||||| |  ||||| ||||| ||||||||||||    
T  6822794 actattgaaaatggcacttttttttatggcagtcttatccgcaatcaaggtaatcaacggctccatctgttctatgtcctcctccaatttgtcaatcatt 6822695  T
Q  292 aaacatccagatagaatgagagttttcagagattt 326  Q
     |||||||||| ||||| | |||||  ||||||||    
T  6822694 caacatccagaaagaatcaaagtttctagagattt 6822660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 39 - 391
Target Start/End: Original strand, 5689983 - 5690335
Alignment:
Q  39 taaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgacatccaagaccaaatgatagaaggaaacacatca 138  Q
    |||||||||||| ||||||||  |||||| ||||| ||| | ||  || ||| || ||||||||||||||||||||||||||||||| ||||| | ||||    
T  5689983 taaagaaacaagagatgacatggcagcagatgtttcaaagggggatgaaagagcacttgttggtgacatccaagaccaaatgatagatggaaatatatca 5690082  T
Q  139 cgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatca 238  Q
    |||||||||||||||| ||| |||| ||||||| | ||||||| |||||||||||| | ||||||||| ||  |||||||  |||||| |||||||| ||    
T  5690083 cgtgagaatccttcatgtccgcacagagaaatatacccaatgctttttgaccttacaattgaaaagggcacacttgttattccagtgtcatttgcaagca 5690182  T
Q  239 gagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagatagaatgagagttttcagagatttcaacgtatagat 338  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| ||||||| |||| || || ||||||||||||||||||||||||||| |||||||    
T  5690183 gagtggttaaagattccatttgttccaagtcctcttccaacttgttaatcattgaacacccggaaagaatgagagttttcagagatttcaacttatagat 5690282  T
Q  339 gtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    | |||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  5690283 gcttcttggaaggttagaaaggctaatacaatcttccaaatttatcagaagaa 5690335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 87 - 391
Target Start/End: Original strand, 5128289 - 5128593
Alignment:
Q  87 gagaccatttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgtttt 186  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||||||  || |||| ||| ||| ||||||||| ||||    
T  5128289 gagatcatttgttggtgacatccaagaccagatgatagatggaaacacatcacttgaaaatccttcatggccgcacagagagatatatccaatgcttttt 5128388  T
Q  187 gaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaa 286  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||| |||||| ||||| || |||||||||||||| |||||||||||||||||||    
T  5128389 gaccttactactgaaaagggtactctttttattgcagtgttatttgcaagcagagttgttaatgattccatttgttccaagtcctcttccaacttgtcaa 5128488  T
Q  287 tcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaa 386  Q
    |||||| ||| ||||| |||||||||||||||| |||||||||| |||||||| ||||||| ||| |||| |||||||| ||||||| |||||||||||     
T  5128489 tcattatacaaccagaaagaatgagagttttcaaagatttcaacttatagatgcttcttgggaggctacataggctaatgcaatcttccaaatttatcag 5128588  T
Q  387 aagaa 391  Q
    |||||    
T  5128589 aagaa 5128593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 379
Target Start/End: Original strand, 5066572 - 5066858
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| || |||||||| ||  ||||||||| ||||||||||    
T  5066572 atttgttggtgacatccaagacaaaatgatagatggaaacacatcacgcgagaatccttcatagccgcacaaagagatgtatccaatgctttttgacctt 5066671  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||||||||||||||| | || |||| ||||| |||| ||||| ||||||||||||||| ||||||||||| |  |||||||| ||||||||||||||||    
T  5066672 actactgaaaagggtattctttttattgcagttttatgtgcaagcagagtggttaaagattccatttgttctatgtcctcttctaacttgtcaatcatta 5066771  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaat 379  Q
     ||| ||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||||||| |||||||| |||||    
T  5066772 tacacccagaaagaatgagagttttaagagatttcaacttatagatgcttcttggaaggttacgaaggctaacacaatcttccaaat 5066858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 95 - 380
Target Start/End: Complemental strand, 5345062 - 5344777
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttac 194  Q
    |||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  5345062 ttgttggtgacatccaagaccagatgatagatggaaatacatcgcgtgagaatccttcatagccacacagagaaatatatccaatgctttttgaccttac 5344963  T
Q  195 tactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaa 294  Q
    |||| ||||||| ||||||||||| |||||||||||||| |||||| |||||||||| | ||||||||| || ||||||||||||||||||||| |||||    
T  5344962 tactaaaaagggaacttttgttattgcagtgttatttgcgatcagaatggttaaagatttcatttgttctaagtcctcttccaacttgtcaatctttaaa 5344863  T
Q  295 catccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatt 380  Q
    || || || |||||||||||||| ||||| |||||| |||||||| ||||||| ||| |||| ||||||||||| |||| ||||||    
T  5344862 caacccgaaagaatgagagtttttagagaattcaacttatagatgcttcttggcaggctacataggctaatacagtcttccaaatt 5344777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 13 - 379
Target Start/End: Complemental strand, 5096991 - 5096625
Alignment:
Q  13 tcatgggaaatactatttgttgcatttaaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgacatccaag 112  Q
    ||||||||| ||||||||| | ||| || ||||||||| ||||||||  ||  || ||||||||    ||  ||||||  |||||||||||||| |||||    
T  5096991 tcatgggaactactatttggtacatctacagaaacaagggatgacatgacattagatgtttgaactagggatgagagattatttgttggtgacaaccaag 5096892  T
Q  113 accaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaagggtacttt 212  Q
    |||| |||||||| ||||||||||||||||| ||||||||||  ||||| | ||||||  ||||||||| |||||||||||||||||||||||||||| |    
T  5096891 accagatgatagacggaaacacatcacgtgaaaatccttcatggccacatagagaaatgtatccaatgctttttgaccttactactgaaaagggtactct 5096792  T
Q  213 tgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagatagaatgaga 312  Q
    | ||||  ||||||||||||||| |||| ||||||| || ||||||||||| |  ||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  5096791 ttttattccagtgttatttgcaagcagaatggttaatgattccatttgttctatgtcctcttccaactcgtcaatcattatacacccagaaagaatgaga 5096692  T
Q  313 gttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaat 379  Q
    |||||||||||||||||| |||||||| ||| ||||||| ||| |||||||| |||||||| |||||    
T  5096691 gttttcagagatttcaacttatagatgcttcctggaaggctacgaaggctaacacaatcttccaaat 5096625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 93 - 389
Target Start/End: Original strand, 5181805 - 5182101
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    |||||| ||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||| |||||| || |||||| ||| ||| ||    
T  5181805 atttgtcggtgacatccaagaccaaatgatcgctggaaacacatcatgtgagaatccttcatatccacacaaggaaatatatgcaatgcttttggacttt 5181904  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    ||||||||||| || ||| ||||||| |||||||||||||||||||  ||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  5181905 actactgaaaacggcactcttgttattgcagtgttatttgcaatcaatgtggttaaagatttcatttgttccaaatcctcttccaacttgtcaatcatta 5182004  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaag 389  Q
    |||| ||||| ||||||||||| || |  ||||||||  |||||||| ||||||||||| |   ||||||||| ||||||| |||||||||||||||    
T  5182005 aacacccagaaagaatgagagtgtttaatgatttcaaattatagatgcttcttggaaggctttgaaggctaatgcaatcttccaaatttatcaaaag 5182101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 5426190 - 5425855
Alignment:
Q  16 tgggaaatactatttgttgcatttaaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgacatccaagacc 115  Q
    |||||| |||||| || | ||| ||||| |||||| ||||||||   | ||| ||||||||| | ||  | ||||  |||||||||||||||||||||||    
T  5426190 tgggaattactatgtggtacatctaaaggaacaagagatgacatgatatcagatgtttgaaatggggatgggagattatttgttggtgacatccaagacc 5426091  T
Q  116 aaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaagggtacttttgt 215  Q
    ||||||| |  ||||||||||||||||| ||||||||||| || |||||||| ||  ||||||||| || |||| |||| ||||||||||||||| || |    
T  5426090 aaatgatcgctggaaacacatcacgtgaaaatccttcatagccgcacaaagagatgtatccaatgctttgtgacattaccactgaaaagggtactctttt 5425991  T
Q  216 tatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagatagaatgagagtt 315  Q
    ||| ||||| |||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  5425990 tattgcagttttatgtgcaatcagagtggttaaagattccatttgttctatgtcctcttccaacttgtcaatcattacacacccagaaagaatgagagtt 5425891  T
Q  316 ttcagagatttcaacgtatagatgtttcttggaagg 351  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5425890 ttcagagatttcaacttatagatgtttcttggaagg 5425855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 391
Target Start/End: Original strand, 5073786 - 5074084
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    |||||| ||||||||||||||||||||||| || || |||||||||||||||||||||||||| || |||||||||||| ||||||||| ||| ||||||    
T  5073786 atttgtcggtgacatccaagaccaaatgatcgatgggaacacatcacgtgagaatccttcatagccgcacaaagaaatatatccaatgcttttcgacctt 5073885  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||||||||||||| ||| ||||||| || ||||||||||| |||||||||||||||||   ||| ||||| || ||||||||||||||||||||||||     
T  5073886 actactgaaaagggcactcttgttattgcggtgttatttgctatcagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaatcattg 5073985  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    |||| || || |||||||||||||| |||||||||||| |||||||  ||||||||||| |   ||| | ||||||||||| ||||||||||| |||||    
T  5073986 aacacccggaaagaatgagagtttttagagatttcaacttatagatacttcttggaaggctctgaagaccaatacaatcttccaaatttatcagaagaa 5074084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 379
Target Start/End: Original strand, 5102492 - 5102778
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||| ||||| | ||| ||| ||||||||| ||||||||||    
T  5102492 atttgttggtgacatccaagaccagatgatagatggaaacacatcatgtgaaagtccttcatagccacatagagagatatatccaatgctttttgacctt 5102591  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||||||||||||| ||| ||||||| |||||||| ||||| |  ||||||||||| || |||||||||||||| || ||||||||||||||||||||||    
T  5102592 actactgaaaagggcactgttgttattgcagtgttgtttgctagaagagtggttaatgattccatttgttccaagtcgtcttccaacttgtcaatcatta 5102691  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaat 379  Q
    |||| ||||| ||||||||  |||||| |||||||||| |||||||| ||||||||||| ||| |||||||| |||||||| |||||    
T  5102692 aacacccagaaagaatgagtattttcaaagatttcaacttatagatgcttcttggaaggctacgaaggctaacacaatcttccaaat 5102778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 95 - 391
Target Start/End: Complemental strand, 5176940 - 5176644
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttac 194  Q
    |||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||| || |||||||| ||  ||||||||| ||||||||||||    
T  5176940 ttgttggtgacatccaagaccaaatgattgatggaaatatatcacgtgagaatccttcatagccgcacaaagagatgtatccaatgctttttgaccttac 5176841  T
Q  195 tactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaa 294  Q
    || ||| ||||| ||| ||||||| |||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||||||  ||    
T  5176840 tattgacaagggcactcttgttattgcagtgttatttgcaagcagagtagttaaagattccatttgttccaagtcctcttccaacttgtcaatcatcgaa 5176741  T
Q  295 catccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    || ||||| |||||||| ||||||| |||||||||| |||||||  ||||||||||  |   ||||||||||||||||| ||| ||||||| |||||    
T  5176740 cacccagaaagaatgagtgttttcaaagatttcaacttatagatacttcttggaagactctgaaggctaatacaatcttccaagtttatcagaagaa 5176644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 40 - 391
Target Start/End: Original strand, 5354439 - 5354790
Alignment:
Q  40 aaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgacatccaagaccaaatgatagaaggaaacacatcac 139  Q
    ||||||||||| ||||||||  |||||| ||||||||| |  |    ||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  5354439 aaagaaacaagagatgacatggcagcagatgtttgaaatggagatcggagattatttgttggtgacatccaagaccaaatgatagatggaaacacatcac 5354538  T
Q  140 gtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcag 239  Q
    |||||||||||||||| ||||| ||||||||| ||||||||| ||| || || |||| ||| ||||||||| ||||||| ||||||| |||||||| |||    
T  5354539 gtgagaatccttcatagccacataaagaaatatatccaatgcttttggaactaactattgagaagggtactcttgttattgcagtgtcatttgcaagcag 5354638  T
Q  240 agtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatg 339  Q
     ||||||||||| |||| ||||||||| ||||||||||||||||| | | ||  ||| ||||| |||||||||||||||| |||||||||| | ||||||    
T  5354639 ggtggttaaagattccaattgttccaagtcctcttccaacttgtctaactttttacaaccagaaagaatgagagttttcaaagatttcaacttgtagatg 5354738  T
Q  340 tttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
     ||||||| ||| || ||||| |||| || ||||| |||||||||| |||||    
T  5354739 cttcttgggaggctagaaaggttaatgcagtctttgaaatttatcagaagaa 5354790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 93 - 391
Target Start/End: Complemental strand, 5447790 - 5447492
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    |||| |||||||||||||||||| ||| ||||| |||||||||||| | ||| |||||||| |||| |||||||||||| |||||||||  || |||||     
T  5447790 atttcttggtgacatccaagaccgaataatagatggaaacacatcatgcgaggatccttcaaatccgcacaaagaaatatatccaatgctcttcgaccta 5447691  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    ||||| |||||||| ||| ||||||| | ||| |||||||||| ||||||||||||||| ||||| |||||||| |||||||||| |||||||||| |||    
T  5447690 actaccgaaaagggcactgttgttattgaagtattatttgcaagcagagtggttaaagattccatctgttccaagtcctcttccagcttgtcaatcttta 5447591  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    |||| ||||| |||||||||||||||| |||||||||| |||||||| ||||||| |||||||  |||| ||||||||||| ||||||||||| |||||    
T  5447590 aacaaccagaaagaatgagagttttcaaagatttcaacttatagatgcttcttgggaggttacctaggccaatacaatcttccaaatttatcagaagaa 5447492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 95 - 391
Target Start/End: Complemental strand, 5278767 - 5278471
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttac 194  Q
    |||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||| || |||||||| ||  ||||||||| ||||||||||||    
T  5278767 ttgttggtgacatccaagaccaaatgattgatggaaatatatcacgtgagaatccttcatagccgcacaaagagatgtatccaatgctttttgaccttac 5278668  T
Q  195 tactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaa 294  Q
    ||  || ||||| ||| ||||||| |||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||||||  ||    
T  5278667 tatagacaagggcactcttgttattgcagtgttatttgcaagcagagtagttaaagattccatttgttccaagtcctcttccaacttgtcaatcatcgaa 5278568  T
Q  295 catccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    || ||||| |||||||| ||||||| |||||||||| |||||||  ||||||||||  |   ||||||||||||||||| ||| ||||||| |||||    
T  5278567 cacccagaaagaatgagtgttttcaaagatttcaacttatagatacttcttggaagactctgaaggctaatacaatcttccaagtttatcagaagaa 5278471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 16 - 379
Target Start/End: Original strand, 5157429 - 5157792
Alignment:
Q  16 tgggaaatactatttgttgcatttaaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgttggtgacatccaagacc 115  Q
    |||||| |||||| || | ||| ||||| |||||| ||||||||  |||||| ||||||||| |  |  | ||||  |||||||||||||||||||||||    
T  5157429 tgggaattactatgtggtacatctaaaggaacaagagatgacatggcagcagatgtttgaaatggagatgggagattatttgttggtgacatccaagacc 5157528  T
Q  116 aaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaagggtacttttgt 215  Q
    |||||||||| |||||||||||||| || ||||||||||| || | |||||| ||  ||||||||| |||||||||||||||||||||||||||| || |    
T  5157529 aaatgatagatggaaacacatcacgagaaaatccttcatagccgcccaaagagatgtatccaatgctttttgaccttactactgaaaagggtactctttt 5157628  T
Q  216 tatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagatagaatgagagtt 315  Q
    ||| |||||||  | ||||| ||||||||||||||| ||||| ||||| |  ||||||||||||||||||||||||| ||| || || ||||| | | ||    
T  5157629 tattgcagtgtcgtgtgcaagcagagtggttaaagattccatctgttctatgtcctcttccaacttgtcaatcattatacaccctgaaagaattaaaatt 5157728  T
Q  316 ttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaat 379  Q
    ||||||||||||||| |||||||| ||||||||||| | | |||||||| |||||||| |||||    
T  5157729 ttcagagatttcaacttatagatgcttcttggaaggcttcgaaggctaacacaatcttccaaat 5157792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 93 - 373
Target Start/End: Complemental strand, 5370774 - 5370494
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||| |||  |||||||| |||||  ||||||||| |||||||| |    
T  5370774 atttgttggtgacatccaagaccaaatgatagatggaaaaacatcatgtgaaaatcctacatggccacacaatgaaatgtatccaatgctttttgaccgt 5370675  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||||||||||||||||  || |||| |||||||||||||||| |||||||||||| || ||||| ||||| |  |||||||||||||| ||||||||||    
T  5370674 actactgaaaagggtaccctttttattgcagtgttatttgcaagcagagtggttaatgattccatctgttctatatcctcttccaacttctcaatcatta 5370575  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctt 373  Q
     ||| || || ||||| ||||| || |||||||||||| |||| ||| ||||||||||||||| |||||||| ||||||||    
T  5370574 cacaccctgaaagaataagagtctttagagatttcaacttataaatgcttcttggaaggttacgaaggctaacacaatctt 5370494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 93 - 391
Target Start/End: Complemental strand, 5434238 - 5433940
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||||||||||||||||||||  ||||||| | ||||| | |||  |||||||||||||||| || |||||||| ||| ||||||||| |||||| ||     
T  5434238 atttgttggtgacatccaagactgaatgataaatggaaataaatcgtgtgagaatccttcataaccgcacaaagagatatatccaatgctttttgatctc 5434139  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    | ||||||||  || ||| || |||| |||||||||||||||| ||||||||||||||| ||||| |||||||| || |||||||| ||||||||| |||    
T  5434138 agtactgaaagaggcactctttttattgcagtgttatttgcaagcagagtggttaaagattccatatgttccaagtcatcttccaaattgtcaatcttta 5434039  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    |||| ||||  || ||||||||||||| |||||||||| |||| ||| ||||||| |||||||| |||| ||||||||||| ||||||||||| |||||    
T  5434038 aacagccagtaaggatgagagttttcaaagatttcaacttatatatgcttcttgggaggttacataggccaatacaatcttccaaatttatcagaagaa 5433940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 93 - 391
Target Start/End: Complemental strand, 5383529 - 5383231
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||||||  ||||||||||||  |||||| || ||||||||||||||||||||||||||||  || |||||||||||| || |||| | ||||||||||    
T  5383529 atttgttgaggacatccaagacttaatgatggatggaaacacatcacgtgagaatccttcatggccgcacaaagaaatatatacaatactttttgacctt 5383430  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |  | ||||| ||| ||| ||||||| |||||||||| ||||| || ||| |||||||| ||||||||||| |  |||||||||||||||  |||| |||    
T  5383429 aaaattgaaaggggaactcttgttattgcagtgttatctgcaagcaaagtagttaaagattccatttgttctatgtcctcttccaacttggtaatcttta 5383330  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    |||| ||||| ||||||||||||||||||||||||||| |||| ||| ||||||| ||| |||| ||||||| ||| |||| |||||| |||| |||||    
T  5383329 aacaaccagaaagaatgagagttttcagagatttcaacttataaatgcttcttgggaggctacataggctaacacagtcttccaaattaatcagaagaa 5383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 93 - 351
Target Start/End: Complemental strand, 5350591 - 5350339
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    |||||||||||||||||||||   |||||||      |||||||||||||| ||||||||||| || |||||||| ||  ||||||||| ||||||||||    
T  5350591 atttgttggtgacatccaagaatgaatgata------aacacatcacgtgaaaatccttcatagccgcacaaagagatgtatccaatgctttttgacctt 5350498  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||||||||||||||| | || |||| ||||| |||| ||||| ||||||||||||||| ||||||||||| |  |||||||||||||||||||||||||    
T  5350497 actactgaaaagggtattctttttattgcagttttatgtgcaagcagagtggttaaagattccatttgttctatgtcctcttccaacttgtcaatcatta 5350398  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaagg 351  Q
     ||| || || |||||||||||||| |||||||||||| || ||||| |||||||||||    
T  5350397 tacaccctgaaagaatgagagttttgagagatttcaacttaaagatgcttcttggaagg 5350339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 93 - 387
Target Start/End: Original strand, 5284267 - 5284561
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    |||||||| ||||||||| ||| |||| ||  | ||||||||||| | ||| | ||| ||||| || ||||||| |||| ||||||||| ||| ||||||    
T  5284267 atttgttgctgacatccatgacaaaattattaatggaaacacatcgcttgaaagtccctcataaccgcacaaagcaatatatccaatgcttttcgacctt 5284366  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||||||||||||| ||| ||||||| || |||||||| || |||||||||||||||||   ||| ||||| || ||||||||||||||||||||||||     
T  5284367 actactgaaaagggcactcttgttattgcggtgttattagctatcagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaatcattg 5284466  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaa 387  Q
    |||| ||| | ||||||| |||||| |||||||||||| |||||||| ||| ||| ||| |||| | |||||||||| |||  ||||||||||||    
T  5284467 aacacccaaaaagaatgaaagtttttagagatttcaacttatagatgcttcgtgggaggctacataagctaatacaaccttcaaaatttatcaaa 5284561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 95 - 351
Target Start/End: Complemental strand, 5397151 - 5396895
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttac 194  Q
    |||||||||||||||||||| |||||||||  |||||||| |||| ||| |||||||||||||| |||||||| ||||||||||||| |||| ||||||     
T  5397151 ttgttggtgacatccaagacgaaatgatagctggaaacacttcacatgaaaatccttcatatccgcacaaagagataaatccaatgctttttaaccttaa 5397052  T
Q  195 tactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaa 294  Q
     | |||||| || ||| || |||| |||||||||||||||| ||  ||||||||||| ||||| |||||||| || |||||||| |||||||||| ||||    
T  5397051 aattgaaaacggcactctttttattgcagtgttatttgcaaccaaggtggttaaagattccatctgttccaaatcttcttccaatttgtcaatcagtaaa 5396952  T
Q  295 catccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaagg 351  Q
    || ||||| ||||  |||||||  || ||||||||| |||| ||  |||||||||||    
T  5396951 cacccagaaagaagaagagtttgtagtgatttcaacttataaatacttcttggaagg 5396895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 102 - 388
Target Start/End: Original strand, 5257221 - 5257507
Alignment:
Q  102 tgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaa 201  Q
    ||||||||||||| |||||||  | |||||||||   | ||| ||||||||||| ||   |||||| | |||| | |||| |||||| ||||  |||||     
T  5257221 tgacatccaagacaaaatgattaatggaaacacaatgcttgaaaatccttcataaccgtgcaaagagacaaattcgatgctttttgatcttaaaactgat 5257320  T
Q  202 aagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccag 301  Q
    || || ||| ||||||| ||||||||||||||||| ||||||||||||||   ||| ||||| || |||||||||||||||||||||||| |||| ||||    
T  5257321 aatggcactcttgttattgcagtgttatttgcaattagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaatcattgaacacccag 5257420  T
Q  302 atagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaa 388  Q
    | ||||||| |||||| |||||||||||| |||||||| ||||||| || |  || | |||||||||||||| ||||||||||||||    
T  5257421 aaagaatgaaagtttttagagatttcaacttatagatgcttcttgggagttcgcataagctaatacaatcttccaaatttatcaaaa 5257507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 106 - 316
Target Start/End: Complemental strand, 5281490 - 5281280
Alignment:
Q  106 atccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaagg 205  Q
    |||||||||| ||||||| | ||||  ||||||||||||||||||| ||| || || ||||||||| ||||||||  |||  ||||| |||||| |||||    
T  5281490 atccaagaccgaatgatatatggaactacatcacgtgagaatcctttatagccgcagaaagaaatatatccaatgtttttcaaccttcctactgcaaagg 5281391  T
Q  206 gtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagatag 305  Q
    | ||| ||||||| ||||||| ||| |||||||| || ||||| || |||||||||||||| |||||||| ||||||| ||||||| |||| ||||| ||    
T  5281390 gaactcttgttattgcagtgtcattagcaatcagggtcgttaaggattccatttgttccaagtcctcttctaacttgttaatcattgaacacccagaaag 5281291  T
Q  306 aatgagagttt 316  Q
    ||| |||||||    
T  5281290 aatcagagttt 5281280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 193 - 391
Target Start/End: Complemental strand, 5447260 - 5447062
Alignment:
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||| ||| ||||||| | ||||||| | ||||||||||||||  |||||||||||||| |||||||  || || |||||||||| |||||||||| |||    
T  5447260 actattgataagggtattgttgttattgaagtgttatttgcaagaagagtggttaaagattccattttctcgaagtcctcttccaccttgtcaatcttta 5447161  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    |||| ||||| |||| ||||||||||| |||||||||| |||||||| || |||| ||| |||| |||||||| || |||| ||| ||||||| |||||    
T  5447160 aacaaccagaaagaacgagagttttcaaagatttcaacttatagatgctttttgggaggctacataggctaatgcagtcttccaagtttatcagaagaa 5447062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 5243793 - 5243914
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttac 194  Q
    |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||| |||| |||| ||||||||||||    
T  5243793 ttgttggtgacatccaagaccagatgatagatggaaatacatcgcgtgaaaatccttcatagccacacaaagaaatatatccgatgctttttgaccttac 5243892  T
Q  195 tactgaaaagggtacttttgtt 216  Q
    |||||||||||| ||| |||||    
T  5243893 tactgaaaagggcactcttgtt 5243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 106 - 316
Target Start/End: Complemental strand, 5179731 - 5179521
Alignment:
Q  106 atccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaaagg 205  Q
    |||||||||| ||||||| | ||||  ||||||||||||||||||| ||| || || ||||||||| ||||||||  |||  ||||| |||||| |||||    
T  5179731 atccaagaccgaatgatatatggaactacatcacgtgagaatcctttatagccgcagaaagaaatatatccaatgtttttcaaccttcctactgcaaagg 5179632  T
Q  206 gtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccagatag 305  Q
    | ||| | ||||| ||||||| ||| |||||||| || ||||| || ||||||| |||||| |||||||||||||||| |||| || |||| ||||| ||    
T  5179631 gaactctagttattgcagtgtcattagcaatcagggtcgttaaggattccatttcttccaagtcctcttccaacttgttaatctttgaacacccagaaag 5179532  T
Q  306 aatgagagttt 316  Q
    ||| |||||||    
T  5179531 aatcagagttt 5179521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 258 - 379
Target Start/End: Original strand, 5243910 - 5244031
Alignment:
Q  258 ttgttccaactcctcttccaacttgtcaatcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaa 357  Q
    ||||||||| |||||||||||||| |||||||||| ||| || || ||||||| ||||||||||||||||||| |||||||| ||||||||||| | | |    
T  5243910 ttgttccaagtcctcttccaacttctcaatcattatacaccctgagagaatgaaagttttcagagatttcaacttatagatgcttcttggaaggcttcga 5244009  T
Q  358 aggctaatacaatctttcaaat 379  Q
    ||||||| |||||||| |||||    
T  5244010 aggctaacacaatcttccaaat 5244031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 31059813 - 31059863
Alignment:
Q  98 ttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatc 148  Q
    ||||||||||| |||||||||||| ||||||||| ||||||| ||| ||||    
T  31059813 ttggtgacatcaaagaccaaatgagagaaggaaaaacatcacatgacaatc 31059863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 2938311 - 2938282
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgat 122  Q
    ||||||||||||||||||||||||||||||    
T  2938311 atttgttggtgacatccaagaccaaatgat 2938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 3e-89; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 391
Target Start/End: Complemental strand, 8877812 - 8877514
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| || |||||||||||| ||||||||| ||||||||||    
T  8877812 atttgttggtgacatccaagaccaaatgatagatggaaacacatcacgcgaaaatccttcatagccgcacaaagaaatatatccaatgctttttgacctt 8877713  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||| |||||| |||||| || |||| |||||||||||||||| ||||||||||||||| | ||| ||||| || ||||| ||||||||||||||||||     
T  8877712 actaatgaaaatggtactctttttattgcagtgttatttgcaagcagagtggttaaagatttcatctgttctaagtcctcctccaacttgtcaatcattg 8877613  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
    |||| ||||| |||||||||| ||| |||||||||||| | || ||  ||||||||||| | | ||||||||||||||||| |||||||||||||||||    
T  8877612 aacacccagaaagaatgagagattttagagatttcaacttgtatatacttcttggaaggctccgaaggctaatacaatcttccaaatttatcaaaagaa 8877514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 12599054 - 12599138
Alignment:
Q  97 gttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgc 181  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||| || ||| |||||||||    
T  12599054 gttggtgacatccaagaccaattgagagaaggaaaaacatcacgtgataatccttcatatccacacaaggatatatatccaatgc 12599138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 20838831 - 20838717
Alignment:
Q  97 gttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttacta 196  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||||| |  || ||| ||||||||| |||||| ||| |||    
T  20838831 gttggtgacatccaagaccaaatgagagaaggaaaaacatcatgtgataatccttcatatccacatagtgatatatatccaatgctttttgatcttgcta 20838732  T
Q  197 ctgaaaagggtactt 211  Q
     |||| |||| ||||    
T  20838731 ttgaatagggcactt 20838717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 20812476 - 20812362
Alignment:
Q  97 gttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttacta 196  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| |  || ||| || |||||| |||||| ||| |||    
T  20812476 gttggtgacatccaagaccaaatgagagaaggaaaaacatcacgtgataatccttcgtatccacatagtgatatatatgcaatgctttttgatcttgcta 20812377  T
Q  197 ctgaaaagggtactt 211  Q
     |||| |||| ||||    
T  20812376 ttgaatagggcactt 20812362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 30418021 - 30417953
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacaca 163  Q
    |||||||||||||||||||||  |||| | ||||||| ||||||||||  ||||||||| |||||||||    
T  30418021 ttgttggtgacatccaagaccgtatgagacaaggaaaaacatcacgtgcaaatccttcaaatccacaca 30417953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 379
Target Start/End: Original strand, 8778 - 9064
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||||||  || |||||||||||| || |||| | ||||||||||    
T  8778 atttgttggagacatccaagacttaatgatagatggaaacacatcacgtgagaatccttcatggccgcacaaagaaatatatacaatactttttgacctt 8877  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    |||| ||||||||| ||| ||||||  |||||||||| ||||| ||||||||||||||| ||||| ||||| |  |||||||||||||||||||||||||    
T  8878 actattgaaaagggcactcttgttaatgcagtgttatctgcaagcagagtggttaaagattccatctgttctatgtcctcttccaacttgtcaatcatta 8977  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaat 379  Q
     ||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||| |||||||| |||||    
T  8978 tacacccagaaagaatgagagttttcagagatttcaacttatagatgcttcttggaaggctacgaaggctaacacaatcttccaaat 9064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 87 - 383
Target Start/End: Original strand, 36213701 - 36213997
Alignment:
Q  87 gagaccatttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgtttt 186  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| ||| |  | |||| |||     
T  36213701 gagaacatttgttggtgacatccaagaccaaatgatagatggaaacacatcatgtgagaatccttcatagccgcacaaagatatataagcgatgctttta 36213800  T
Q  187 gaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaa 286  Q
    || |||||||||||||| || ||| ||||||| |||||||||||||||||||  ||||||||||| ||||| |||||||  ||||||||||| |||||||    
T  36213801 gatcttactactgaaaatggcactcttgttattgcagtgttatttgcaatcaaggtggttaaagattccatctgttccatgtcctcttccaatttgtcaa 36213900  T
Q  287 tcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttat 383  Q
    || || |||||||||| |||||||||||||| ||  |||| ||| |||||||   | | |||||| |   ||||||||||||||||| |||||||||    
T  36213901 tctttgaacatccagaaagaatgagagttttaagtaattttaacttatagatacctttaggaaggctttgaaggctaatacaatcttccaaatttat 36213997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 92 - 391
Target Start/End: Complemental strand, 18935590 - 18935291
Alignment:
Q  92 catttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacct 191  Q
    |||||||||| ||||||||||||  ||| || ||||||||||||| |||||  ||||||||| |||||||||  |||||||||||||||| |||||| ||    
T  18935590 catttgttggagacatccaagactgaataattgaaggaaacacattacgtgctaatccttcaaatccacacagtgaaataaatccaatgctttttgatct 18935491  T
Q  192 tactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatt 291  Q
    |||||||| |||||| ||| |||||| |||||| ||||  |||| ||| ||||| |||||   ||| ||||| |  ||||||||||||||||||||  ||    
T  18935490 tactactgcaaagggcactcttgttacagcagtcttatccgcaaccagggtggtcaaagatgtcatctgttctatgtcctcttccaacttgtcaattttt 18935391  T
Q  292 aaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatcaaaagaa 391  Q
      ||||||||||| |||||||| ||| |  || |  ||  |||||||| |||||||||| | ||||||||   |||| |||||||||||||| |||||||    
T  18935390 gtacatccagataaaatgagagctttgaccgactctaatttatagatgcttcttggaagttcacaaaggcctgtacagtctttcaaatttattaaaagaa 18935291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 81 - 391
Target Start/End: Original strand, 34724452 - 34724762
Alignment:
Q  81 gggcgagagaccatttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatg 180  Q
    |||| ||| |||||||||||| ||||||||||||  ||| || ||||| ||||||| |||||  ||||||||| ||||||| |  |||||||||||||||    
T  34724452 gggcaagataccatttgttggagacatccaagactgaataattgaagggaacacattacgtgcaaatccttcaaatccacaaagtgaaataaatccaatg 34724551  T
Q  181 cgttttgaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaact 280  Q
    | |||||| |||||||||| ||| || ||  |||||| || ||| ||||  ||||  ||| |||| ||||||  ||||||||| |  |||||||||||||    
T  34724552 ctttttgatcttactactgcaaatggaacccttgttacagaagtcttatccgcaactagaatggtcaaagaagtcatttgttctatgtcctcttccaact 34724651  T
Q  281 tgtcaatcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatt 380  Q
    |||||||  ||  ||||||||| | |||||||||||| |  || |||||  |||||||| |||||||||| | ||||||||   |||| |||||||||||    
T  34724652 tgtcaatttttgtacatccagacacaatgagagtttttactgacttcaatttatagatgcttcttggaagctcacaaaggcctgtacagtctttcaaatt 34724751  T
Q  381 tatcaaaagaa 391  Q
    |||||| ||||    
T  34724752 tatcaatagaa 34724762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 95 - 383
Target Start/End: Original strand, 22584094 - 22584382
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttac 194  Q
    |||||| |||||||||||||||||| ||||| ||||  ||||| | | ||| ||||||||| ||||||||||||||  | | |||   ||||||||| |     
T  22584094 ttgttgatgacatccaagaccaaatcatagatggaactacatcgcttaagagtccttcatagccacacaaagaaatgtaccaaatagtttttgacctaaa 22584193  T
Q  195 tactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaa 294  Q
    || |||||| || |||||| |||| ||||| | |||||||| ||||||||||||||| |||||||||||||| |||||||||||||| | ||   || ||    
T  22584194 tattgaaaatggcactttttttattgcagtttcatttgcaagcagagtggttaaagattccatttgttccaagtcctcttccaacttataaagtttttaa 22584293  T
Q  295 catccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttat 383  Q
    || ||||| |||||||||||||||| |||||||||| | |||||||||||||| ||| |||||||||| | ||| |||| |||||||||    
T  22584294 cagccagaaagaatgagagttttcaaagatttcaacttgtagatgtttcttgggaggctacaaaggcttaaacagtcttgcaaatttat 22584382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 391
Target Start/End: Original strand, 47986823 - 47987028
Alignment:
Q  186 tgaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtca 285  Q
    |||||| |||||||| || || ||| ||||||| |||||||||||||||| || ||| |||||||| | ||||| |||||  |||||||||||||||| |    
T  47986823 tgacctcactactgataaaggcactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgtta 47986922  T
Q  286 atcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatca 385  Q
    ||| ||||||| ||||| |||||||||||||| |||||||| ||  | ||  || ||||||| ||| |||| ||||||||||| |||| |||||||||||    
T  47986923 atctttaaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatca 47987022  T
Q  386 aaagaa 391  Q
     |||||    
T  47987023 gaagaa 47987028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 391
Target Start/End: Original strand, 47996110 - 47996315
Alignment:
Q  186 tgaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtca 285  Q
    |||||| |||||||| || || ||| ||||||| |||||||||||||||| || ||| |||||||| | ||||| |||||  |||||||||||||||| |    
T  47996110 tgacctcactactgataaaggcactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgtta 47996209  T
Q  286 atcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatca 385  Q
    ||| ||||||| ||||| |||||||||||||| |||||||| ||  | ||  || ||||||| ||| |||| ||||||||||| |||| |||||||||||    
T  47996210 atctttaaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatca 47996309  T
Q  386 aaagaa 391  Q
     |||||    
T  47996310 gaagaa 47996315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 391
Target Start/End: Original strand, 48005397 - 48005602
Alignment:
Q  186 tgaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtca 285  Q
    |||||| |||||||| || || ||| ||||||| |||||||||||||||| || ||| |||||||| | ||||| |||||  |||||||||||||||| |    
T  48005397 tgacctcactactgataaaggcactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgtta 48005496  T
Q  286 atcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatca 385  Q
    ||| ||||||| ||||| |||||||||||||| |||||||| ||  | ||  || ||||||| ||| |||| ||||||||||| |||| |||||||||||    
T  48005497 atctttaaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatca 48005596  T
Q  386 aaagaa 391  Q
     |||||    
T  48005597 gaagaa 48005602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 391
Target Start/End: Original strand, 48014682 - 48014887
Alignment:
Q  186 tgaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtca 285  Q
    |||||| |||||||| || || ||| ||||||| |||||||||||||||| || ||| |||||||| | ||||| |||||  |||||||||||||||| |    
T  48014682 tgacctcactactgataaaggcactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgtta 48014781  T
Q  286 atcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatctttcaaatttatca 385  Q
    ||| ||||||| ||||| |||||||||||||| |||||||| ||  | ||  || ||||||| ||| |||| ||||||||||| |||| |||||||||||    
T  48014782 atctttaaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatca 48014881  T
Q  386 aaagaa 391  Q
     |||||    
T  48014882 gaagaa 48014887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 47986750 - 47986812
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcata 155  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  47986750 atttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgaaaatccttcata 47986812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 47996037 - 47996099
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcata 155  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  47996037 atttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgaaaatccttcata 47996099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 48005324 - 48005386
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcata 155  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  48005324 atttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgaaaatccttcata 48005386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 48014609 - 48014671
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcata 155  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  48014609 atttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgaaaatccttcata 48014671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 6905806 - 6905869
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatcc 158  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||    
T  6905806 ttgttggtgacatccaagaccaaatgagagaaggaaaaatatcacgtgataatccttcatatcc 6905869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 32411083 - 32411194
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttac 194  Q
    |||||||||||||| |||||||||||| ||| ||||| || ||| |||| ||||||||||||||||| | ||| ||| || | |||| ||| || |||||    
T  32411083 ttgttggtgacatctaagaccaaatgagagagggaaatacttcatgtgataatccttcatatccacatagagatatatatgcgatgcttttcgatcttac 32411182  T
Q  195 tactgaaaaggg 206  Q
    || |||| ||||    
T  32411183 tattgaacaggg 32411194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 326
Target Start/End: Complemental strand, 6856 - 6629
Alignment:
Q  99 tggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactact 198  Q
    ||||||||||||||| | ||| |  |||||||||||||| ||||| ||||||||| ||||||| ||||||||| ||||||||  ||| || | ||||| |    
T  6856 tggtgacatccaagagcgaataagtgaaggaaacacatcccgtgaaaatccttcaaatccacataaagaaatatatccaatgtttttagatcgtactatt 6757  T
Q  199 gaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatc 298  Q
    |||||||| ||||||||||||||||| ||||  |||||||  ||  | || || ||||| |||||||| ||||| ||||| ||||||||| |  ||||||    
T  6756 gaaaagggaacttttgttatagcagtcttatccgcaatcaaggttttcaatgattccatctgttccaagtcctcctccaatttgtcaatcttggaacatc 6657  T
Q  299 cagatagaatgagagttttcagagattt 326  Q
    |||| ||||| | |||||  ||||||||    
T  6656 cagaaagaatcaaagtttctagagattt 6629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0813 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0813
Description:

Target: scaffold0813; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 326
Target Start/End: Original strand, 4710 - 4937
Alignment:
Q  99 tggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactact 198  Q
    ||||||||||||||||| || || | ||||||| ||||| ||||| ||||||||| | ||||| | ||||||| ||||||||  | || | ||||||| |    
T  4710 tggtgacatccaagaccgaacgagaaaaggaaatacatctcgtgaaaatccttcaaagccacatagagaaatatatccaatgtttcttaatcttactatt 4809  T
Q  199 gaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatc 298  Q
    ||||| || ||||||||||||||||| ||||  |||||||  ||  | || || ||||| |||||||| ||||| ||||| ||||||||| |  ||||||    
T  4810 gaaaacggcacttttgttatagcagtcttatccgcaatcaaggttttcaatgattccatctgttccaagtcctcctccaatttgtcaatcttggaacatc 4909  T
Q  299 cagatagaatgagagttttcagagattt 326  Q
    |||| ||||| | |||||  ||||||||    
T  4910 cagaaagaatcaaagtttctagagattt 4937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 350
Target Start/End: Complemental strand, 9883 - 9636
Alignment:
Q  103 gacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttactactgaaa 202  Q
    ||||||||||| | ||||| |||||| || ||||||||||| ||||||||| | || |  ||||||||| ||||||||  |||    ||||||| |||||    
T  9883 gacatccaagagcgaatgagagaagggaatacatcacgtgaaaatccttcaaagccgcttaaagaaatatatccaatgtttttcattcttactattgaaa 9784  T
Q  203 agggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaacatccaga 302  Q
    | || |||||| |||||||||| |||| ||||||||  ||  | | ||| ||||| ||| |||| ||||| ||||| |||||||||||  ||||||||||    
T  9783 atggaactttttttatagcagtcttatctgcaatcaaggtaataagagattccatctgtaccaaatcctcctccaatttgtcaatcatggaacatccaga 9684  T
Q  303 tagaatgagagttttcagagatttcaacgtatagatgtttcttggaag 350  Q
     ||||| | |||||  |||||||| || ||||||||| |||| |||||    
T  9683 aagaatcaaagtttgtagagattttaatgtatagatgcttctcggaag 9636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 350
Target Start/End: Original strand, 8163 - 8420
Alignment:
Q  93 atttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgacctt 192  Q
    ||||| ||||||||||||||| | || || ||||| ||| ||| ||||||  ||||||||| | ||||  ||||||||| ||||||||  |||  | |||    
T  8163 atttgatggtgacatccaagagcgaacgagagaagaaaatacagcacgtgtaaatccttcaaagccacctaaagaaatatatccaatggttttcaatctt 8262  T
Q  193 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcatta 292  Q
    || |||||||| || |||||| |||||||||| ||||  |||||||  ||  | ||||| ||||| |||||||| ||||| ||||| || ||||||||      
T  8263 accactgaaaatggcactttttttatagcagtcttatcagcaatcaaggtaatcaaagattccatctgttccaagtcctcctccaatttttcaatcatgg 8362  T
Q  293 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaag 350  Q
    |||||||||| ||||| | |||||  |||||||| ||  ||||| || ||||||||||    
T  8363 aacatccagaaagaatcaaagtttctagagattttaatttatagttgcttcttggaag 8420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 328
Target Start/End: Original strand, 3286516 - 3286748
Alignment:
Q  96 tgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttact 195  Q
    |||||||||||||||||||| ||||| |||  |||| |||||| |||| ||||||||||||||||| |  || ||| |||  |||| |||||| |||||     
T  3286516 tgttggtgacatccaagacctaatgagagattgaaaaacatcatgtgataatccttcatatccacatagggatatatatctgatgctttttgatcttaca 3286615  T
Q  196 actgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaac 295  Q
    | ||||||||| |||| | | | ||| || |||||||||||||| || || || || ||||| ||  | |  || |||||||||||||||||| || |||    
T  3286616 attgaaaagggcacttctttaacagctgtattatttgcaatcagtgttgtcaaggattccatctgcactatgtcttcttccaacttgtcaatctttgaac 3286715  T
Q  296 atccagatagaatgagagttttcagagatttca 328  Q
    | ||||| || |||||||| |||| ||||||||    
T  3286716 aaccagaaaggatgagagtgttcaaagatttca 3286748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 3407323 - 3407389
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccaca 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  3407323 ttgttggtgacatccaagaccaaatgatagaaggaaaaacatcacgtgataatccttgatatccaca 3407389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 319
Target Start/End: Complemental strand, 31176046 - 31175824
Alignment:
Q  97 gttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttacta 196  Q
    ||||||||||||||||||||||||| ||||||||| || |||| ||| ||||||||||||||||| | ||| ||| || |||||| |||||| ||| |||    
T  31176046 gttggtgacatccaagaccaaatgagagaaggaaaaacgtcacatgataatccttcatatccacatagagatatatatgcaatgctttttgatcttgcta 31175947  T
Q  197 ctgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagaatccatttgttccaactcctcttccaacttgtcaatcattaaaca 296  Q
     |||| |||| |||| | | ||| |||| ||   |||||| | ||| || || || ||||||||    |  || |||||||| |||||||||||| ||||    
T  31175946 ttgaatagggcacttgtttgataccagtatttgctgcaattaaagttgtcaaggattccatttgcaatatatcttcttccaatttgtcaatcattgaaca 31175847  T
Q  297 tccagatagaatgagagttttca 319  Q
     ||||| ||||||||| ||||||    
T  31175846 accagaaagaatgagacttttca 31175824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 3262629 - 3262737
Alignment:
Q  97 gttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgaccttacta 196  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||| |  || ||| ||||||||| |||||| |||||||    
T  3262629 gttggtgacatccaagaccaaatgatagagggaaaaacatcacgtgaaaatcc-tcatatccacatagggatatatatccaatgctttttgatcttacta 3262727  T
Q  197 ctgaaaaggg 206  Q
     |||| ||||    
T  3262728 ttgaataggg 3262737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 3391536 - 3391629
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttga 188  Q
    ||||||||||||||||||||| ||||| ||||||||| |||| | |||| ||||||||||||||||| | ||| ||| ||||||||| ||||||    
T  3391536 ttgttggtgacatccaagacctaatgagagaaggaaaaacatgatgtgataatccttcatatccacatagagatatatatccaatgctttttga 3391629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 3315056 - 3314993
Alignment:
Q  98 ttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccaca 161  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| ||||    
T  3315056 ttggtgacatccaagaccaaatgatagaaggaaaaacatcacgtgataaaccttcatattcaca 3314993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 3364370 - 3364277
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttga 188  Q
    |||||||||| |||||||||| ||||| ||||||||| |||| | |||| ||||||||||||||||| | ||| ||| ||||||||| ||||||    
T  3364370 ttgttggtgatatccaagacctaatgagagaaggaaaaacatgatgtgataatccttcatatccacatagagatatatatccaatgctttttga 3364277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 3325003 - 3325091
Alignment:
Q  98 ttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgtttt 186  Q
    |||||||||||||||||||||||||||||||||| |||||  |||| | ||||||||||||||| |  || ||| ||||||||| ||||    
T  3325003 ttggtgacatccaagaccaaatgatagaaggaaaaacatcgtgtgatagtccttcatatccacagagggatatatatccaatgcttttt 3325091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 3398522 - 3398613
Alignment:
Q  97 gttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttga 188  Q
    |||||||||||||| |||||||||| ||||||||| ||||||   || ||||||| ||||||||| | ||| ||| || |||||| ||||||    
T  3398522 gttggtgacatccatgaccaaatgagagaaggaaaaacatcagacgataatcctttatatccacatagagatatatatgcaatgctttttga 3398613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 7164654 - 7164714
Alignment:
Q  97 gttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatc 157  Q
    ||||||||||||||||||||||| | ||||||||| |||||||  || || ||||||||||    
T  7164654 gttggtgacatccaagaccaaataagagaaggaaaaacatcacaggataacccttcatatc 7164714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 3267198 - 3267264
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccaca 161  Q
    ||||||||||||||||||||  ||| |||||| |||| |||||   ||| |||||||||||||||||    
T  3267198 ttgttggtgacatccaagactgaataatagaatgaaaaacatcttctgataatccttcatatccaca 3267264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 6146 - 6209
Alignment:
Q  95 ttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatcc 158  Q
    ||||||||||||||||||||||||| |  |||||||| ||||||||||| ||||||||||||||    
T  6146 ttgttggtgacatccaagaccaaataagggaaggaaaaacatcacgtgataatccttcatatcc 6209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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