View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11698_low_27 (Length: 205)
Name: NF11698_low_27
Description: NF11698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11698_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 21416574 - 21416404
Alignment:
| Q |
17 |
cagagaaacagagcaagctgaagaggtagatagaagaaaactcacattgagctgaaccatatagttcattctaacattttcactttcatcacaaagctta |
116 |
Q |
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| T |
21416574 |
cagagaaacagagcaagctgaagaggtagatagaagaaaactcacattgagctgaaccatatagttcattctaacattttcactttcatcacaaagctta |
21416475 |
T |
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| Q |
117 |
tccaaaaacaaaaacctccttaacccatacttcttcacaaacgtggacaaacacaaaaacgacaacaccgc |
187 |
Q |
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||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
21416474 |
tccaaaaacaaaaaccttctcaacccatacttcttcacaaacgtcgacaaacacaaaaacgacaacaccgc |
21416404 |
T |
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