View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11699_low_5 (Length: 346)
Name: NF11699_low_5
Description: NF11699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11699_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 104 - 333
Target Start/End: Original strand, 14987531 - 14987759
Alignment:
| Q |
104 |
tcatttttgtaatattagttagaaaacaataatgtttccctccatttgaatatttctattgatactagataatataaaaccaatagtgtgagaataatgt |
203 |
Q |
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| T |
14987531 |
tcatttttgtaatattagttagaaaacaataatatttccc-ccatttgaatttttctattgatacttgataatataaaaacaatagtgtgagaataatgt |
14987629 |
T |
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| Q |
204 |
catcatcagcaatgtatgtttctatatgtgtgtagtagatcccatgactccttcaaccatcctcctcttccattttacctatcttttccctctctttacg |
303 |
Q |
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| T |
14987630 |
catcatcagcaatgtatgtttctatatgtgtgtagtagatcccatgactccttcaaccatcctcctcttccattttacctatcttttccctctctttacg |
14987729 |
T |
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| Q |
304 |
tcacattttgattgtgaaactcaatcctcc |
333 |
Q |
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| T |
14987730 |
tcacattttgattgtgaaactcaaacctcc |
14987759 |
T |
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