View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1169_high_41 (Length: 296)
Name: NF1169_high_41
Description: NF1169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1169_high_41 |
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Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 9 - 267
Target Start/End: Original strand, 14886233 - 14886491
Alignment:
| Q |
9 |
gatatgaagacataaagacgccttgacaaaacacacacagatattaaagaaactgccttatcatagtaaaatccaagaaactccaacttagagttctcaa |
108 |
Q |
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| T |
14886233 |
gatatgaagacataaagacgccttgacaaaatacacacatatattaaagaaactgccttatcatagtaaaatccaagaaactccaacttagagttctcaa |
14886332 |
T |
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| Q |
109 |
aattcatctttagaatgagacactctctcccctatttcctatctatttcaataatttcatttgcattcaatctatacagagatcccaaaagagaaatagg |
208 |
Q |
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| T |
14886333 |
aattcatctttagaatgagacactctctcccctatttcctatctatttcaataatttcatttgcattcaatctatacagagatcccaaaagagaaatagg |
14886432 |
T |
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| Q |
209 |
cctaaagtccttgaaggaaaggtgagaattgaactttggaatcaaactaacaaagtata |
267 |
Q |
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| T |
14886433 |
cctaaagtccttgaaggaaaggtgagaattgaactttggaatcaaactaacaaagtata |
14886491 |
T |
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