View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1169_high_46 (Length: 262)
Name: NF1169_high_46
Description: NF1169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1169_high_46 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 39120610 - 39120359
Alignment:
| Q |
1 |
ccagcatgactgcatatacctcccatgggagtctgcacggaagcaacaaataagattactaagatttcatatagcattttcaaataaggttgaaaaccca |
100 |
Q |
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| T |
39120610 |
ccagcatgactgcatatacctcccatgggagtctgcacggaagcaacaaataagattactaagatttcatatagcattttcaaataaggttaaaaaccca |
39120511 |
T |
|
| Q |
101 |
acatgaatagtagcagtaaaacattttaaaaatacttttaagaaaattagcatgctacaaactgaaccgcaccctaagaaaagcgctgcaagtcctatac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
39120510 |
acatgaatagtagcagtaaaacattttaaaaatacttttaacaaaattagcatgctacaaactgaaccgcaccctaagcaaagcgctgcaagtcctatac |
39120411 |
T |
|
| Q |
201 |
caactgctgttgtgccagtaccagcatccacaacaaacttcatggccctttg |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39120410 |
caactgctgttgtgccagtaccagcatccacaacaaacttcatggccctttg |
39120359 |
T |
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