View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1169_low_19 (Length: 433)
Name: NF1169_low_19
Description: NF1169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1169_low_19 |
 | |
|
| [»] scaffold0692 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 365; Significance: 0; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 12907568 - 12907148
Alignment:
| Q |
1 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
12907568 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgattatgctagtattcttatgagaggtaccagaaatggttgagacaagtct |
12907469 |
T |
|
| Q |
101 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcga |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
12907468 |
tgctatgccaaaatcactcaaatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatggaggattaactgctcacattctcga |
12907369 |
T |
|
| Q |
201 |
tgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgta |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | |||||| |||||||||||||| | || ||||||| |
|
|
| T |
12907368 |
tgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctaagaccaaggttcaatgttgttggaggatttgcattcaaagtttcaggatgta |
12907269 |
T |
|
| Q |
301 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12907268 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
12907169 |
T |
|
| Q |
401 |
caaatttctgtgtctaatatt |
421 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
12907168 |
caaatttctgtgtctaatatt |
12907148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 12932657 - 12932237
Alignment:
| Q |
1 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12932657 |
gaatttaaaacatacccggtggagcataaccaactgttccttttactccgattgtgctagtattcttattagaggtaccggaaatggttgagacaagtct |
12932558 |
T |
|
| Q |
101 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12932557 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgctcacattctcga |
12932458 |
T |
|
| Q |
201 |
tgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgta |
300 |
Q |
| |
|
||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||| |||| ||||||| |
|
|
| T |
12932457 |
tgaaggtaatgcaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattcaaagtctcaggatgta |
12932358 |
T |
|
| Q |
301 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12932357 |
accactgttctaagcttccatttttcatgtattcaaaaactagtgctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
12932258 |
T |
|
| Q |
401 |
caaatttctgtgtctaatatt |
421 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
12932257 |
caaatttcggtgtctaatatt |
12932237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 414
Target Start/End: Complemental strand, 12899948 - 12899535
Alignment:
| Q |
1 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtct |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
12899948 |
gaatttaaaacatacccggaggagcataaccaactgttccttttattccaattgtgctagtattcttatgagaggtaccagaaattgttgagacaagtct |
12899849 |
T |
|
| Q |
101 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | || ||| ||||||||||||||| |
|
|
| T |
12899848 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttatatcacaatgaaagactaattgctcacattctcga |
12899749 |
T |
|
| Q |
201 |
tgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgta |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||| |||| ||||||| |
|
|
| T |
12899748 |
tgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattcaaagtctcgggatgta |
12899649 |
T |
|
| Q |
301 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
400 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12899648 |
accattgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
12899549 |
T |
|
| Q |
401 |
caaatttctgtgtc |
414 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
12899548 |
caaatttcggtgtc |
12899535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 12958456 - 12958036
Alignment:
| Q |
1 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtct |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12958456 |
gaatttaaaacatacccggaggagcataaccaactgttccttttattccaattgtgctagtattcttattagaggtaccggaaatggttgagacaagtct |
12958357 |
T |
|
| Q |
101 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcga |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||| |
|
|
| T |
12958356 |
tgctattccaaaatcactcacatgagcaaccatgtcaccatcaagaaggacattgcttggctttagatcacagtgaaggattaactgctcacattctcga |
12958257 |
T |
|
| Q |
201 |
tgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgta |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| | |||||| || | ||||||||||| | ||||||| |
|
|
| T |
12958256 |
tgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggactcgcattcaaaatttgaggatgta |
12958157 |
T |
|
| Q |
301 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
400 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12958156 |
accactgttctaagcttccattttccatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccctaac |
12958057 |
T |
|
| Q |
401 |
caaatttctgtgtctaatatt |
421 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
12958056 |
caaatttcggtgtctaatatt |
12958036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 12949022 - 12948602
Alignment:
| Q |
1 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtct |
100 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12949022 |
gaatgtaaaacgtacccggtggagcataaccaactgttccttttattccaattgtactagtattcttattagaggtactggaaatggttgagacaagtct |
12948923 |
T |
|
| Q |
101 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| |||||||||| |||| |
|
|
| T |
12948922 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggactaattgctcacattatcga |
12948823 |
T |
|
| Q |
201 |
tgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgta |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||||||||| | |||||| |||||||||||||| |||| ||||||| |
|
|
| T |
12948822 |
tgaagataatgtaatgcagaagcaacatcgataatgatgtttaatctacgacgaaggttcaatgttgttggaggatttgcattcaaagtctcaggatgta |
12948723 |
T |
|
| Q |
301 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12948722 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttggcctttgttatttgtgctagaacaacatgttaaaaccttaac |
12948623 |
T |
|
| Q |
401 |
caaatttctgtgtctaatatt |
421 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
12948622 |
caaatttcggtgtctaatatt |
12948602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 17923234 - 17923654
Alignment:
| Q |
1 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtct |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
17923234 |
gaatttaaaacatacccgatggagcataaccaactgttccttttattccgatcgtactagtattcttattagaggtaccggaaatggttgagacaagtct |
17923333 |
T |
|
| Q |
101 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17923334 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgctcacattctcga |
17923433 |
T |
|
| Q |
201 |
tgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgta |
300 |
Q |
| |
|
||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||| |||| ||||||| |
|
|
| T |
17923434 |
tgaaggtaatgcaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattcaaagtctcaggatgta |
17923533 |
T |
|
| Q |
301 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17923534 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
17923633 |
T |
|
| Q |
401 |
caaatttctgtgtctaatatt |
421 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
17923634 |
caaatttcggtgtctaatatt |
17923654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 1 - 408
Target Start/End: Complemental strand, 7671 - 7264
Alignment:
| Q |
1 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
7671 |
gaatttaaaacatacccggtggagcataaccagctgttccttttattccgattgtgctagtattcttattagacgtaccagaaatggttgagacaagtct |
7572 |
T |
|
| Q |
101 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||||||| |
|
|
| T |
7571 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaagtattaattgctcacattctcga |
7472 |
T |
|
| Q |
201 |
tgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgta |
300 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| | ||||| |||||||||||||| |||| ||||||| |
|
|
| T |
7471 |
tgaagttaatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttattggaggatttgcattcaaagtctcaggatgta |
7372 |
T |
|
| Q |
301 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7371 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccctaac |
7272 |
T |
|
| Q |
401 |
caaatttc |
408 |
Q |
| |
|
|||||||| |
|
|
| T |
7271 |
caaatttc |
7264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 23)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 415
Target Start/End: Complemental strand, 10605130 - 10604716
Alignment:
| Q |
1 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtct |
100 |
Q |
| |
|
||||||| |||||||| || |||||||| ||||| ||||||||||| || || || |||||||| ||| |||||||||| ||||| ||||| ||||| |
|
|
| T |
10605130 |
gaatttagaacatacctggaggagcatatccaacagttccttttatcccaattgtactagtatttatatgagaggtaccaccaatggacgagaccagtct |
10605031 |
T |
|
| Q |
101 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||| | || ||| |||||||||||| || |
|
|
| T |
10605030 |
tgctatgccaaaatcactcacatgagcaaccatatcatcatcaagtaggacattgcttggctttagatcacaatgaatgactaattgctcacattcttga |
10604931 |
T |
|
| Q |
201 |
tgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgta |
300 |
Q |
| |
|
||||||||||| |||||||||||||||| | |||||||| ||||| | |||||||| ||| | |||||| | | |||||| |||||||| ||||| | |
|
|
| T |
10604930 |
tgaagataatgcaatgcagaagcaacatcaaaaatgatgttaaatcttttaccaaggtccaacgttgttggaggctctgcatttaaaatctcaggatgca |
10604831 |
T |
|
| Q |
301 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
400 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | ||| |
|
|
| T |
10604830 |
accattgttctaagcttccatttttcatgtaatcaaaaactagagctttaaattcttgacctttgtaatctgtactagaacaacatgttaaaacttgaac |
10604731 |
T |
|
| Q |
401 |
caaatttctgtgtct |
415 |
Q |
| |
|
||||| | |||||| |
|
|
| T |
10604730 |
taaattccggtgtct |
10604716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 12 - 421
Target Start/End: Original strand, 10740541 - 10740950
Alignment:
| Q |
12 |
atacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtcttgctatgccaa |
111 |
Q |
| |
|
||||| || |||||||| ||||| |||||||||||||| || || ||||| | ||| | ||||||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
10740541 |
atacctggaggagcatagccaacagttccttttattccaattgtactagtttccttgtgagaggtatcgtcaatggctgagacaagtcttgctatgccaa |
10740640 |
T |
|
| Q |
112 |
aatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcgatgaagataatg |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| || || ||||||||| | ||||||||||| |
|
|
| T |
10740641 |
aatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgttcacattcttggtgaagataatg |
10740740 |
T |
|
| Q |
212 |
taatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgtaaccactgttct |
311 |
Q |
| |
|
|||||||| || |||| | | |||||||||||||| |||||||||| |||| | ||||||||| |||||| |||||||| |||| ||||| |||||| |
|
|
| T |
10740741 |
taatgcagtggcgacatcgttcatgatgtttaatctatgaccaaggtccaatgttcttggatgatctgcatttaaaatctcaagatgcaaccattgttct |
10740840 |
T |
|
| Q |
312 |
aagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaaccaaatttctgt |
411 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||| |||||||||||||| |||| |||||| ||||||| || |
|
|
| T |
10740841 |
aagcttccatttttcatgtaatcaaaaacaagagctttaaaagtttgacctttgtaatctgtactagaacaacatgtcaaaatcttaactaaatttcggt |
10740940 |
T |
|
| Q |
412 |
gtctaatatt |
421 |
Q |
| |
|
|||||||||| |
|
|
| T |
10740941 |
gtctaatatt |
10740950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 2 - 421
Target Start/End: Complemental strand, 10581373 - 10580962
Alignment:
| Q |
2 |
aatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtctt |
101 |
Q |
| |
|
|||||||||||||||| | |||||||| |||| ||||||||||||||| | || ||||||||||||| || ||||||| |||||| ||||||||||||| |
|
|
| T |
10581373 |
aatttaaaacatacccagaggagcatagccaattgttccttttattccagttgtactagtattcttatgagtggtaccacaaatggctgagacaagtctt |
10581274 |
T |
|
| Q |
102 |
gctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcgat |
201 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||||| ||||||| || ||||||||| | |||| || |||||||||||||||| |
|
|
| T |
10581273 |
gctgtgccaaaatcactcacatga----ccatgtcatcatcaagaagtg---tgcttggctttagatcacaacgaaggaccaattgctcacattctcgat |
10581181 |
T |
|
| Q |
202 |
gaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgtaa |
301 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| | ||| || | | |||| | ||| ||| ||||| || |
|
|
| T |
10581180 |
gaagataatgtaatgcagaagcaacatccataatgatgtttaatctatgaccaaggttcaatgttgttagaggttctgcacttaaa-tctgaggatgcaa |
10581082 |
T |
|
| Q |
302 |
ccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaacc |
401 |
Q |
| |
|
||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |||||| || |
|
|
| T |
10581081 |
ccattgttctaagcttccatttttcatgtaataaaaaactaaagctttaaattcttggcctttgtaatttgtactagaacaacatgttagaaccttgact |
10580982 |
T |
|
| Q |
402 |
aaatttctgtgtctaatatt |
421 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
10580981 |
aaattttggtgtctaatatt |
10580962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 71 - 418
Target Start/End: Original strand, 10216650 - 10216997
Alignment:
| Q |
71 |
agaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatca |
170 |
Q |
| |
|
|||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || |||||| |
|
|
| T |
10216650 |
agaggtaccaccaatggttgagacaaatgttgctatgccaaaatcactcacatgagcaaccatgtcatcattcagaagaacattgcttggctttagatca |
10216749 |
T |
|
| Q |
171 |
caatggaggattaactgctcacattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttg |
270 |
Q |
| |
|
||||| | || || |||||||||||| |||| |||||||||||||| |||||||||| ||| ||||||||||| || |||||||||| |||| | ||| |
|
|
| T |
10216750 |
caatgaataatcaattgctcacattcttgatgcagataatgtaatgccgaagcaacatcgataatgatgtttaacctatgaccaaggtccaatgtttttg |
10216849 |
T |
|
| Q |
271 |
gatgatttgcattcaaaatctccggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatt |
370 |
Q |
| |
|
|||| | || ||| |||||||| ||||| ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || |
|
|
| T |
10216850 |
gatgctctgaatttaaaatctcaggatgcaaccattgttctaagcttccatttttcatgtaataaaaaactagagctttaaattcttgacctttgtagtt |
10216949 |
T |
|
| Q |
371 |
tgtgctagaacaacatgttaaaaccttaaccaaatttctgtgtctaat |
418 |
Q |
| |
|
||| |||||||||||||||||||||||||| | |||| ||||||||| |
|
|
| T |
10216950 |
tgtactagaacaacatgttaaaaccttaactgagtttcggtgtctaat |
10216997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 419
Target Start/End: Complemental strand, 10612088 - 10611670
Alignment:
| Q |
1 |
gaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtct |
100 |
Q |
| |
|
||||||| |||||||| || |||||||| ||||| || ||||| ||||| || || |||||||||||| ||||| |||| ||||| ||||||||||| |
|
|
| T |
10612088 |
gaatttagaacatacctggaggagcatagccaacagtccctttaattccaattgtcttagtattcttatgagaggaaccaccaatggccgagacaagtct |
10611989 |
T |
|
| Q |
101 |
tgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcga |
200 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| || | ||||||||| |||| || ||||||||||| | |
|
|
| T |
10611988 |
tgctatgccaaaatcactcacatgtgcaaccatatcatcatcaagtaggacattgcttggctttatatcacaatgaaggaccaattgctcacattcatta |
10611889 |
T |
|
| Q |
201 |
tgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgta |
300 |
Q |
| |
|
||||||||||||||||||||| |||||| || |||||||||||||| |||| |||| |||| | | || ||| | | |||| |||| || ||||| | |
|
|
| T |
10611888 |
tgaagataatgtaatgcagaaccaacatccataatgatgtttaatctatgactgaggtccaatgttgctgtatgctcttcatttaaaaccttgggatgca |
10611789 |
T |
|
| Q |
301 |
accactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaac |
400 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
10611788 |
accattgttctaagcttccatttttcatgtaatcaaaaactagggctttaaattcttgacctttgtaatctgtactagaacaacatgttaaaatcttaac |
10611689 |
T |
|
| Q |
401 |
caaatttctgtgtctaata |
419 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
10611688 |
taaatttcggtgtctaata |
10611670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 90 - 421
Target Start/End: Original strand, 10716860 - 10717191
Alignment:
| Q |
90 |
gagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgct |
189 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| || | |
|
|
| T |
10716860 |
gagacaagttttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttaagatcacaatgaatgattaattgtt |
10716959 |
T |
|
| Q |
190 |
cacattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaat |
289 |
Q |
| |
|
|||||||| | ||||||||||||||||||| || |||| ||| |||||||||||||| |||||||||| |||| | ||||||||| |||||| ||||| |
|
|
| T |
10716960 |
cacattcttggtgaagataatgtaatgcagtggcgacatcgatcatgatgtttaatctatgaccaaggtccaatgttcttggatgatctgcatttaaaat |
10717059 |
T |
|
| Q |
290 |
ctccggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgtt |
389 |
Q |
| |
|
||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| |
|
|
| T |
10717060 |
ctcaagatgcaaccattgttctaagcttccatttttcatgtaatcaaaaactagagctttaaaagtttgacctttgtaatctgtactagaacaacatgtt |
10717159 |
T |
|
| Q |
390 |
aaaaccttaaccaaatttctgtgtctaatatt |
421 |
Q |
| |
|
|| | ||| || | ||||| |||||| ||||| |
|
|
| T |
10717160 |
aatatcttcactagatttcggtgtctgatatt |
10717191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 3 - 421
Target Start/End: Complemental strand, 10565403 - 10564985
Alignment:
| Q |
3 |
atttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtcttg |
102 |
Q |
| |
|
|||||||||||||| || |||| ||| || ||||||||||| | | | || || || ||||| |||| |||||||| ||| | |||||| ||||||| |
|
|
| T |
10565403 |
atttaaaacataccaggaggagaatagcctactgttcctttaacttcaattgtacttgtatttttataagaggtactgccaatagctgagacgagtcttg |
10565304 |
T |
|
| Q |
103 |
ctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcgatg |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||| | || || | |||||||||| ||| |
|
|
| T |
10565303 |
ctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggatattgcttggctttagatcacaatgaatgaccaattcttcacattctctatg |
10565204 |
T |
|
| Q |
203 |
aagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgtaac |
302 |
Q |
| |
|
|||||||||||||||||||||||||| ||| || |||| |||||| ||| ||| || |||| | ||||| | | |||||| |||||||| ||||| ||| |
|
|
| T |
10565203 |
aagataatgtaatgcagaagcaacatcgataataatgtataatctatgagcaaagtccaatgttgttgggggttctgcatttaaaatctcaggatgcaac |
10565104 |
T |
|
| Q |
303 |
cactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaacca |
402 |
Q |
| |
|
|| || ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| || |||||||| |||||||||||||| | |
|
|
| T |
10565103 |
cattgatctaagcttccatttttcatgtactcaaaaaccagagctttaaattcttgacctttgtaatctgtacttgaacaacaggttaaaaccttaacta |
10565004 |
T |
|
| Q |
403 |
aatttctgtgtctaatatt |
421 |
Q |
| |
|
|||||| ||||| |||||| |
|
|
| T |
10565003 |
aatttcggtgtcgaatatt |
10564985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 89 - 418
Target Start/End: Original strand, 11048576 - 11048905
Alignment:
| Q |
89 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
188 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||||||||||| || | |||||| ||||| ||||| || ||||||||||| | || || ||| |
|
|
| T |
11048576 |
tgagacaagttttgcaatgccaaaatcactcacatgagcaaccatgtcgtcgttaagaagaacattacttggctttagatcacaatgaataatcaattgc |
11048675 |
T |
|
| Q |
189 |
tcacattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaa |
288 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||| || | |||||||| |||| | ||||||| | || ||| |||| |
|
|
| T |
11048676 |
tcacattcttgatgcagataatgtaatgcagaagcaacatcgataatgatgtttaacctatcaccaaggtccaatgtttttggatgctctgaatttaaaa |
11048775 |
T |
|
| Q |
289 |
tctccggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgt |
388 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||| || |
|
|
| T |
11048776 |
tctcaggatgtaaccattgttctaagcttccatttttcatgtaatcaaaaactagtgctttaaattcttcacctttgtaatctgtactagaacaacaggt |
11048875 |
T |
|
| Q |
389 |
taaaaccttaaccaaatttctgtgtctaat |
418 |
Q |
| |
|
|||||||||||| || |||| ||||||||| |
|
|
| T |
11048876 |
taaaaccttaactaagtttcggtgtctaat |
11048905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 12 - 406
Target Start/End: Original strand, 10762975 - 10763369
Alignment:
| Q |
12 |
atacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatgg-ttgagacaagtcttgctatgcca |
110 |
Q |
| |
|
||||| || |||||||| ||||| |||||||||||||| | || ||||| | |||| |||||||| || ||||| |||| || ||||||||||| ||| |
|
|
| T |
10762975 |
atacctggaggagcatagccaacagttccttttattccagttgtactagtttccttaagagaggtacaagcaatggcttga-actagtcttgctattcca |
10763073 |
T |
|
| Q |
111 |
aaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcgatgaagataat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| || ||||||||||||||||||||||||| |
|
|
| T |
10763074 |
aaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcgatgaagataat |
10763173 |
T |
|
| Q |
211 |
gtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctccggatgtaaccactgttc |
310 |
Q |
| |
|
|||||||||||||||||| || ||||| || | ||| ||| |||| | |||| | |||||| | |||||| ||| || || || | ||| |||| |
|
|
| T |
10763174 |
gtaatgcagaagcaacatcaataatgatattcagtctttgatcaagatccaatgttgttggagtctctgcatttaaattcctagggtgcagccatcgttc |
10763273 |
T |
|
| Q |
311 |
taagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaaccaaatt |
406 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||||| |||||| ||||| |
|
|
| T |
10763274 |
taagcttccatttttcatgtaatcaaaaaccagagctttaaattcttgacctttataatcagtactagaacaacatgttaaaatcttaactaaatt |
10763369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 89 - 418
Target Start/End: Original strand, 10746934 - 10747263
Alignment:
| Q |
89 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
188 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| || | || ||| ||| |
|
|
| T |
10746934 |
tgagacaagttttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttgagatcacagtgaatgactaattgc |
10747033 |
T |
|
| Q |
189 |
tcacattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaa |
288 |
Q |
| |
|
||||||||| | |||||||||||||||| |||||||||| ||| |||||||||||||| || ||||||| || | ||||||| | | |||| |||| |
|
|
| T |
10747034 |
tcacattcttggtgaagataatgtaatgttgaagcaacatcgataatgatgtttaatctgtggccaaggtctaacgtttttggatgctcttcatttaaaa |
10747133 |
T |
|
| Q |
289 |
tctccggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgt |
388 |
Q |
| |
|
||| ||||| ||||| |||||||||||||||||||| ||||| | |||||||||||||||||| || ||| ||||||||| | | ||||||||||| || |
|
|
| T |
10747134 |
actcaggatgcaaccattgttctaagcttccattttttatgtaataaaaaactagagctttaaactcctgaactttgtaatctatactagaacaacacgt |
10747233 |
T |
|
| Q |
389 |
taaaaccttaaccaaatttctgtgtctaat |
418 |
Q |
| |
|
||||| |||||| ||||||| ||||||||| |
|
|
| T |
10747234 |
taaaatcttaactaaatttcggtgtctaat |
10747263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 89 - 417
Target Start/End: Original strand, 10588349 - 10588677
Alignment:
| Q |
89 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
188 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || | ||||||||| |||| | |||| |
|
|
| T |
10588349 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacgttgcttggctttatatcacaatgaaggaccacctgc |
10588448 |
T |
|
| Q |
189 |
tcacattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaa |
288 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||| || ||| |||| |||||||| ||| |||||| ||| | ||||||| | || ||||| | |
|
|
| T |
10588449 |
tcacattcatgatgaagataatgtagtgcagaagcaatatcgatagtgatatttaatctatgaacaaggtccaacgttcttggatgctctgaattcacat |
10588548 |
T |
|
| Q |
289 |
tctccggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgt |
388 |
Q |
| |
|
|| ||||| | ||| |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| || | |||||||||||| |
|
|
| T |
10588549 |
tccatggatgaagccattgttctaaacttccatttttcatgtaatcaaaaactaaagctttaaattcttgacctttataatcagtaccagaacaacatgt |
10588648 |
T |
|
| Q |
389 |
taaaaccttaaccaaatttctgtgtctaa |
417 |
Q |
| |
|
||||| ||| ||||||||| ||||||| |
|
|
| T |
10588649 |
taaaatcttggccaaatttcgatgtctaa |
10588677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 89 - 421
Target Start/End: Complemental strand, 10559192 - 10558860
Alignment:
| Q |
89 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
188 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| || ||||||||||| |||| || ||| |
|
|
| T |
10559192 |
tgagacgagtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgc |
10559093 |
T |
|
| Q |
189 |
tcacattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaa |
288 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || ||||| || | ||| ||| ||| | |||| |||| || | | |||||| | |
|
|
| T |
10559092 |
tcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatca |
10558993 |
T |
|
| Q |
289 |
tctccggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgt |
388 |
Q |
| |
|
|| | ||| ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||| || |
|
|
| T |
10558992 |
tccttgaatgcaaccagttttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagt |
10558893 |
T |
|
| Q |
389 |
taaaaccttaaccaaatttctgtgtctaatatt |
421 |
Q |
| |
|
||||| |||||||| ||||| ||||||||||| |
|
|
| T |
10558892 |
taaaatcttaaccagatttcgatgtctaatatt |
10558860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 93 - 421
Target Start/End: Original strand, 19605788 - 19606116
Alignment:
| Q |
93 |
acaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcac |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| || || || |||| ||||||||||||||| || ||||||||||| |||| || ||||||| |
|
|
| T |
19605788 |
acaagtcttgctatgccaaaatcactcacatgtgcaacgatatcgtcgtcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcac |
19605887 |
T |
|
| Q |
193 |
attctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattcaaaatctc |
292 |
Q |
| |
|
|||| ||||||| |||||||||||||||| ||||| || | ||| |||||||| || ||| |||||| | ||||||||| |||||||| || | |
|
|
| T |
19605888 |
attcatgatgaaggtaatgtaatgcagaagaaacatcgacaaggatatttaatctttgctcaaacttcaatgttcttggatgatctgcattcattgtccc |
19605987 |
T |
|
| Q |
293 |
cggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaa |
392 |
Q |
| |
|
||||| ||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||||| || | ||||||||||| |||||| |
|
|
| T |
19605988 |
gggatgcaaccattgttctaagcttccatttctcatgtactcaaaaactagagctttgaattctagacctttgttatcaatactagaacaacaagttaaa |
19606087 |
T |
|
| Q |
393 |
accttaaccaaatttctgtgtctaatatt |
421 |
Q |
| |
|
| |||||| ||||||| ||||||||||| |
|
|
| T |
19606088 |
atcttaactaaatttcgatgtctaatatt |
19606116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 89 - 421
Target Start/End: Complemental strand, 7193295 - 7192963
Alignment:
| Q |
89 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
188 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| | ||| | ||| |
|
|
| T |
7193295 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttagatcacaatgaatgatcgattgc |
7193196 |
T |
|
| Q |
189 |
tcacattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatttcgttggatgatttgcattca-aa |
287 |
Q |
| |
|
|||||||| ||||||| ||||||||| || | |||| || | ||| || ||||| ||| |||||| ||| | || ||| | | |||||| |
|
|
| T |
7193195 |
tcacattcaagatgaaggtaatgtaatacaaaggcaatatcaacagcgatattcaatctttgatcaaggtccaacgttctttgattctctacattcactg |
7193096 |
T |
|
| Q |
288 |
atctccggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatg |
387 |
Q |
| |
|
|||| ||||||| ||| |||||||||||||| || |||||||||||||| |||| |||||||||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
7193095 |
atct-aggatgtagccattgttctaagcttccgttgttcatgtattcaaagactaaagctttaaattcttgacctttgtaatctgtactggaacaacatg |
7192997 |
T |
|
| Q |
388 |
ttaaaaccttaaccaaatttctgtgtctaatatt |
421 |
Q |
| |
|
| |||| |||||||||||||| ||||||||||| |
|
|
| T |
7192996 |
tcaaaatcttaaccaaatttcgatgtctaatatt |
7192963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 65 - 421
Target Start/End: Original strand, 9836223 - 9836579
Alignment:
| Q |
65 |
cttattagaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttta |
164 |
Q |
| |
|
||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||| || |
|
|
| T |
9836223 |
cttatgagaggtaccgtcaatggctgagataagtcttgctatgccaaaatcactcacgtgagcaaccatgttatcatcgagaaggatgttgcttggcttg |
9836322 |
T |
|
| Q |
165 |
agatcacaatggaggattaactgctcacattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaatt |
264 |
Q |
| |
|
| ||||||||| | || | ||||||||||| | |||||||||||||||||||||||||| || ||| ||| |||| ||| ||| ||||||||||| |
|
|
| T |
9836323 |
atatcacaatgaatgaccacttgctcacattcacaatgaagataatgtaatgcagaagcaatatcaatggagatatttagtctttgaacaaggttcaatg |
9836422 |
T |
|
| Q |
265 |
tcgttggatgatttgcattcaaaatctccggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgaccttt |
364 |
Q |
| |
|
| | |||| | || || || || |||| | ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||| |
|
|
| T |
9836423 |
ttctaggatactctgaatccactgtccagggataaagccattgttctaagcttccatttttcatgtaatcaaaaactaaagctttaaattctccaccttt |
9836522 |
T |
|
| Q |
365 |
gtaatttgtgctagaacaacatgttaaaaccttaaccaaatttctgtgtctaatatt |
421 |
Q |
| |
|
|||| | |||||||||||||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
9836523 |
ataatcaatactagaacaacatgttataaccttgaccaaatttcgatgtctaatatt |
9836579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 21 - 409
Target Start/End: Original strand, 10652053 - 10652441
Alignment:
| Q |
21 |
ggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactca |
120 |
Q |
| |
|
|||||||| ||||| || ||||| ||||| || || ||||| | ||| ||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10652053 |
ggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaaatcactca |
10652152 |
T |
|
| Q |
121 |
catgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcgatgaagataatgtaatgcaga |
220 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||||| | || ||||||||||| ||||||| ||||||||| |||| |
|
|
| T |
10652153 |
catgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgtaatacaga |
10652252 |
T |
|
| Q |
221 |
agcaacattgatgatgatgtttaatctctgaccaaggttcaa-tttcgttggatgatttgcattcaaaatctccggatgtaaccactgttctaagcttcc |
319 |
Q |
| |
|
||||| | | ||||| || | || ||| |||||| ||| ||| ||| || |||||||| || | ||||||| ||| ||||||| | |||| |
|
|
| T |
10652253 |
agcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaat-ccctgcattcattatacctggatgtagccattgttctaggtttcc |
10652351 |
T |
|
| Q |
320 |
atttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaaccaaatttct |
409 |
Q |
| |
|
|| |||||||||||||| |||| ||| ||||| |||||||||||||||| || || ||||||||||| |||||||||||||||||||| |
|
|
| T |
10652352 |
gttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttct |
10652441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 83 - 409
Target Start/End: Original strand, 10659998 - 10660324
Alignment:
| Q |
83 |
aatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggatt |
182 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| | || |
|
|
| T |
10659998 |
aatggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattacttggctttagatcacaatgaatgacc |
10660097 |
T |
|
| Q |
183 |
aactgctcacattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctgaccaaggttcaa-tttcgttggatgatttgca |
281 |
Q |
| |
|
||||||||||| ||||||| ||||||||| || ||||| | | ||||| || | || ||| |||||| ||| || ||| || |||| |
|
|
| T |
10660098 |
gcttgctcacattcgtgatgaaggtaatgtaatacactagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacaatctttgaat-ccctgca |
10660196 |
T |
|
| Q |
282 |
ttcaaaatctccggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaac |
381 |
Q |
| |
|
|||| || | ||||||| ||| ||||||| ||||||||| |||||||||||||| |||| ||| ||||| |||||||||||||||| ||| || |||| |
|
|
| T |
10660197 |
ttcattatacctggatgtagccattgttctaggcttccattgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatctgtacttgaac |
10660296 |
T |
|
| Q |
382 |
aacatgttaaaaccttaaccaaatttct |
409 |
Q |
| |
|
||||||| |||||||| ||||||||||| |
|
|
| T |
10660297 |
aacatgtcaaaaccttgaccaaatttct |
10660324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 300 - 421
Target Start/End: Complemental strand, 9825180 - 9825058
Alignment:
| Q |
300 |
aaccactgttctaagcttcc-atttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaacctta |
398 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||||| | |||||| |||||||||||| |||| |
|
|
| T |
9825180 |
aaccattgttctaagcttcccattttgcatgtactcaaaaactagagctttgaattcttgccctttgtaatcgatactagaaaaacatgttaaaatctta |
9825081 |
T |
|
| Q |
399 |
accaaatttctgtgtctaatatt |
421 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
9825080 |
accaaatttcgatgtctaatatt |
9825058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 9825374 - 9825258
Alignment:
| Q |
89 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
188 |
Q |
| |
|
||||||||||||||| ||||||||||||||| | |||| ||| || || ||||||| ||||| ||| ||||| || | ||||||||| |||||||| ||| |
|
|
| T |
9825374 |
tgagacaagtcttgcaatgccaaaatcactcgcctgagaaacaatatcttcatcaacaaggatattacttggctttatatcacaatgaaggattaattgc |
9825275 |
T |
|
| Q |
189 |
tcacattctcgatgaag |
205 |
Q |
| |
|
||||| || |||||||| |
|
|
| T |
9825274 |
tcacaatcacgatgaag |
9825258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 421
Target Start/End: Original strand, 9850836 - 9850952
Alignment:
| Q |
306 |
tgttctaagcttccatttttcatgtattcaaaaactagagc-tttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaaccaaa |
404 |
Q |
| |
|
|||||||||||||||||| ||||||| | |||||||||||| ||| ||||| || |||||||||| | ||||||||| | ||||||| |||||||||| |
|
|
| T |
9850836 |
tgttctaagcttccatttatcatgtactaaaaaactagagcttttgaattcatgccctttgtaatcgatactagaacaagaagttaaaatcttaaccaaa |
9850935 |
T |
|
| Q |
405 |
tttctgtgtctaatatt |
421 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
9850936 |
tttcgatgtctaatatt |
9850952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 10550869 - 10550742
Alignment:
| Q |
294 |
ggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaa |
393 |
Q |
| |
|
||||| ||||| | ||||||| |||||||| ||||||| ||||| || ||||||||||| || |||||||||| |||||| |||||||| || |||| |
|
|
| T |
10550869 |
ggatgcaaccaattttctaagtttccatttctcatgtactcaaatacaagagctttaaactcacttcctttgtaatctgtgctggaacaacaagtcaaaa |
10550770 |
T |
|
| Q |
394 |
ccttaaccaaatttctgtgtctaatatt |
421 |
Q |
| |
|
||||| | ||||||||| |||||||| |
|
|
| T |
10550769 |
ttttaactagatttctgtgcctaatatt |
10550742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 35423960 - 35423919
Alignment:
| Q |
134 |
gtcatcatcaagaaggacattgcttggtttaagatcacaatg |
175 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
35423960 |
gtcatcatcaagaagaacattgcttggtttaacatcacaatg |
35423919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 35376701 - 35376660
Alignment:
| Q |
134 |
gtcatcatcaagaaggacattgcttggtttaagatcacaatg |
175 |
Q |
| |
|
||||||||||||||| ||||||||||| |||| ||||||||| |
|
|
| T |
35376701 |
gtcatcatcaagaagaacattgcttggcttaacatcacaatg |
35376660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 39875809 - 39875897
Alignment:
| Q |
87 |
gttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
175 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
39875809 |
gttgaaacaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatg |
39875897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 39883932 - 39884020
Alignment:
| Q |
87 |
gttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
175 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
39883932 |
gttgaaacaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatg |
39884020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 39890886 - 39890974
Alignment:
| Q |
87 |
gttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
175 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
39890886 |
gttgaaacaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcttcaagaaggacattgcttggttttaaatcacaatg |
39890974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 352
Target Start/End: Original strand, 39898834 - 39898877
Alignment:
| Q |
309 |
tctaagcttccatttttcatgtattcaaaaactagagctttaaa |
352 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
39898834 |
tctaagcttccatttgtcatgtattcaaaaactattgctttaaa |
39898877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 421
Target Start/End: Original strand, 31467300 - 31467413
Alignment:
| Q |
308 |
ttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaaccaaattt |
407 |
Q |
| |
|
|||||||||||| ||||||||||| || ||||| |||||||||||||||||| ||||| ||| ||| || ||||| | |||||||| ||||||||||||| |
|
|
| T |
31467300 |
ttctaagcttccgtttttcatgtactcgaaaacaagagctttaaattcttgatctttgaaatctgtactggaacagcttgttaaaatcttaaccaaattt |
31467399 |
T |
|
| Q |
408 |
ctgtgtctaatatt |
421 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
31467400 |
cggtgtctaatatt |
31467413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 31467092 - 31467218
Alignment:
| Q |
100 |
ttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcg |
199 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||||||| || ||||| || || | ||||||||| | || |||| |||||| | |
|
|
| T |
31467092 |
ttgctatgccaaaatcactcacatgagctaccatagaatcatcaagaagaacgttgctaggctttaaatcacaatgaatgacaggttgctgacattcatg |
31467191 |
T |
|
| Q |
200 |
atgaagataatgtaatgcagaagcaac |
226 |
Q |
| |
|
|||||||||||| ||||| |||||||| |
|
|
| T |
31467192 |
atgaagataatgaaatgccgaagcaac |
31467218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 250
Target Start/End: Original strand, 27723977 - 27724136
Alignment:
| Q |
91 |
agacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctc |
190 |
Q |
| |
|
|||||||| |||||| ||||||||||| ||| ||||||||||||||| |||||||| | || ||||||| | ||||||||||| |||| |||||| |
|
|
| T |
27723977 |
agacaagttttgctagtccaaaatcactaacacgagcaaccatgtcattgtcaagaagaatgttatttggttttaaatcacaatggatgattggctgctc |
27724076 |
T |
|
| Q |
191 |
acattctcgatgaagataatgtaatgcagaagcaacattgatgatgatgtttaatctctg |
250 |
Q |
| |
|
| |||| | |||| ||| |||| |||||||||||||| ||||| || |||| |||||| |
|
|
| T |
27724077 |
agattcacagtgaatatagtgtattgcagaagcaacatctatgataatatttagtctctg |
27724136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 28605907 - 28605827
Alignment:
| Q |
95 |
aagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
175 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| || |||||| | ||||||||| || | ||||||||| |
|
|
| T |
28605907 |
aagtcttgcttgtccaaaatcactcacatgagcaaccatgtcattatgaagaagaatattgcttggctttaaatcacaatg |
28605827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 28605696 - 28605612
Alignment:
| Q |
309 |
tctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaa |
393 |
Q |
| |
|
||||| |||||||||| |||||| |||||||||| |||||| ||||| | ||| ||||||| | || |||||||||||||||| |
|
|
| T |
28605696 |
tctaaacttccattttccatgtactcaaaaactaaagctttgaattcattaccattgtaatccatacttgaacaacatgttaaaa |
28605612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 29623027 - 29623067
Alignment:
| Q |
132 |
atgtcatcatcaagaaggacattgcttggtttaagatcaca |
172 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||| |||||| |
|
|
| T |
29623027 |
atgtcatcatcaagaagaacattgcttggcttaacatcaca |
29623067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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