View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1169_low_46 (Length: 333)

Name: NF1169_low_46
Description: NF1169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1169_low_46
NF1169_low_46
[»] chr1 (23 HSPs)
chr1 (16-333)||(38226795-38227111)
chr1 (18-109)||(27782107-27782198)
chr1 (19-109)||(27777761-27777851)
chr1 (214-333)||(38227064-38227183)
chr1 (214-333)||(38227136-38227255)
chr1 (165-269)||(17663562-17663666)
chr1 (175-252)||(27777591-27777668)
chr1 (175-252)||(27782293-27782370)
chr1 (165-269)||(17700313-17700417)
chr1 (111-252)||(27781234-27781383)
chr1 (217-285)||(38227211-38227279)
chr1 (214-285)||(27781006-27781077)
chr1 (214-284)||(27777490-27777560)
chr1 (214-284)||(27782401-27782471)
chr1 (16-98)||(17700150-17700232)
chr1 (74-109)||(27781404-27781439)
chr1 (16-109)||(21898928-21899020)
chr1 (284-333)||(27781030-27781079)
chr1 (285-333)||(27777513-27777561)
chr1 (285-333)||(27782400-27782448)
chr1 (16-74)||(17663772-17663830)
chr1 (189-269)||(21899130-21899210)
chr1 (214-250)||(27781080-27781116)
[»] chr4 (5 HSPs)
chr4 (144-285)||(35250109-35250250)
chr4 (16-109)||(35249944-35250037)
chr4 (189-275)||(51220010-51220096)
chr4 (189-275)||(51220797-51220883)
chr4 (285-333)||(35250178-35250226)
[»] chr7 (3 HSPs)
chr7 (189-270)||(440904-440985)
chr7 (286-331)||(440929-440974)
chr7 (195-227)||(440807-440839)


Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 333
Target Start/End: Original strand, 38226795 - 38227111
Alignment:
Q  16 attagaagattaagacaaatgtaaaaggtgtaaattgataaactaaactttatatatatcttgtaagcaaattgctcaataattcatgatgatacattac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38226795 attagaagattaagacaaatgtaaaaggtgtaaattgataaactaaactttatatatatcttgtaagcaaattgctcaataattcatgatgatacattac 38226894  T
Q  116 atgacaacgtcaagggtgtccatcccatcataatatcattcaaaatcacaaaaaagatataaactaagacgaaacactagttggtttcatcttcaaactc 215  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| |||||| ||||||| ||||||||||||    
T  38226895 atgacaacgtcaagggtgtccatcccatcataatatcattaaaaatcacaaaaaa-atataaactatgacgagacactaattggttttatcttcaaactc 38226993  T
Q  216 atcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattcaatttcgccttcattatcatcacttggaagttcgttcaaattcaaa 315  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||  |||    
T  38226994 atcacttggaagctcgttcaaatctaaattcttcacaacttttgaccctgattcagtttcaccttcattatcatcacttggaagttcgttcaaatcaaaa 38227093  T
Q  316 ttcttcacaacttttgac 333  Q
    ||||||||| ||||||||    
T  38227094 ttcttcacatcttttgac 38227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 27782107 - 27782198
Alignment:
Q  18 tagaagattaagacaaatgtaaaaggtgtaaattgataaactaaactttatatatatcttgtaagcaaattgctcaataattcatgatgata 109  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27782107 tagaagattaagacaaatgtaaaaggtggaaattgataaactaaactttatatatatcttgtaagcgaattgctcaataattcatgatgata 27782198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 27777851 - 27777761
Alignment:
Q  19 agaagattaagacaaatgtaaaaggtgtaaattgataaactaaactttatatatatcttgtaagcaaattgctcaataattcatgatgata 109  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27777851 agaagattaagacaaatgtaaaagatggaaattgataaactaaactttatatatatcttgtaagcaaattgctcaataattcatgatgata 27777761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 38227064 - 38227183
Alignment:
Q  214 tcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattcaatttcgccttcattatcatcacttggaagttcgttcaaattca 313  Q
    |||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||  |    
T  38227064 tcatcacttggaagttcgttcaaatcaaaattcttcacatcttttgaccctaattcagcttcaccttcattatcatcacttggaagctcgttcaaatcaa 38227163  T
Q  314 aattcttcacaacttttgac 333  Q
     |||||| ||||||||||||    
T  38227164 cattcttaacaacttttgac 38227183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 38227136 - 38227255
Alignment:
Q  214 tcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattcaatttcgccttcattatcatcacttggaagttcgttcaaattca 313  Q
    |||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||| |||| ||||||||||| ||||||| ||| ||||||||||  |    
T  38227136 tcatcacttggaagctcgttcaaatcaacattcttaacaacttttgaccctaattcagtttcaccttcattatcgtcacttgaaagctcgttcaaatcaa 38227235  T
Q  314 aattcttcacaacttttgac 333  Q
     |||||||||||||||||||    
T  38227236 cattcttcacaacttttgac 38227255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 17663666 - 17663562
Alignment:
Q  165 aaaaaagatataaactaagacgaaacactagttggtttcatcttcaaactcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccct 264  Q
    |||||| ||||||||  | | ||||||||| ||||||||||||||||| ||||||||||||||||| || ||||| |||||| | |||||| ||||||||    
T  17663666 aaaaaaaatataaacataaaagaaacactaattggtttcatcttcaaaatcatcacttggaagctcattcaaatcaaaattcctgacaactcttgaccct 17663567  T
Q  265 aattc 269  Q
    |||||    
T  17663566 aattc 17663562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 27777668 - 27777591
Alignment:
Q  175 taaactaagacgaaacactagttggtttcatcttcaaactcatcacttggaagctcgtttaaatctaaattcttcaca 252  Q
    ||||| ||||||| |||||| ||||||||||||||| | |||||||||| || |||||| ||||||||||||||||||    
T  27777668 taaaccaagacgagacactaattggtttcatcttcacaatcatcacttgtaaactcgttcaaatctaaattcttcaca 27777591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 27782293 - 27782370
Alignment:
Q  175 taaactaagacgaaacactagttggtttcatcttcaaactcatcacttggaagctcgtttaaatctaaattcttcaca 252  Q
    ||||| ||||||| |||||| ||||||||||||||| | |||||||||| || |||||| ||||||||||||||||||    
T  27782293 taaaccaagacgagacactaattggtttcatcttcacaatcatcacttgaaaactcgttcaaatctaaattcttcaca 27782370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 17700313 - 17700417
Alignment:
Q  165 aaaaaagatataaactaagacgaaacactagttggtttcatcttcaaactcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccct 264  Q
    |||||| ||||||||  | | ||||||||| ||| ||||||||||||| ||||||||||||||||| || ||||| | |||| | |||||| ||||||||    
T  17700313 aaaaaaaatataaacagaaaagaaacactaattgttttcatcttcaaaatcatcacttggaagctcattcaaatcaacattcctgacaactcttgaccct 17700412  T
Q  265 aattc 269  Q
    |||||    
T  17700413 aattc 17700417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 252
Target Start/End: Complemental strand, 27781383 - 27781234
Alignment:
Q  111 attacatgacaacgtcaagggtgtccatcccat--------cataatatcattcaaaatcacaaaaaagatataaactaagacgaaacactagttggttt 202  Q
    ||||||||||||| |||||||| ||||||||||        ||||||||||||||||||||  |||||||||||||||||||||| || |||  |   ||    
T  27781383 attacatgacaacatcaagggtatccatcccataaaaaattcataatatcattcaaaatcattaaaaagatataaactaagacgagacgctaaatatctt 27781284  T
Q  203 catcttcaaactcatcacttggaagctcgtttaaatctaaattcttcaca 252  Q
    |||||||||| | ||  ||||||||| ||||  |||| ||||||||||||    
T  27781283 catcttcaaaattatttcttggaagcacgttcgaatcaaaattcttcaca 27781234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 38227211 - 38227279
Alignment:
Q  217 tcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattcaatttcgccttcatta 285  Q
    ||||||| ||||||||| ||||| | |||||||||||||||||||||||||||| |||| |||||||||    
T  38227211 tcacttgaaagctcgttcaaatcaacattcttcacaacttttgaccctaattcagtttcaccttcatta 38227279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 27781077 - 27781006
Alignment:
Q  214 tcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattcaatttcgccttcatta 285  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||   |||| |||||||||    
T  27781077 tcatcacttggaagctcgtccaaatcaaaattcttcacaacttttgaccctaattttgtttcaccttcatta 27781006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 27777560 - 27777490
Alignment:
Q  214 tcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattcaatttcgccttcatt 284  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||||||| |||  |||| ||||||||    
T  27777560 tcattacttggaagctcgttcaaatcaaaattcttcacaacttttgaccctagttctgtttcaccttcatt 27777490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 27782401 - 27782471
Alignment:
Q  214 tcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattcaatttcgccttcatt 284  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||||||| |||  |||| ||||||||    
T  27782401 tcattacttggaagctcgttcaaatcaaaattcttcacaacttttgaccctagttctgtttcaccttcatt 27782471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 17700150 - 17700232
Alignment:
Q  16 attagaagattaagacaaatgtaaaaggtgtaaattgataaactaaactttatatatatcttgtaagcaaattgctcaataat 98  Q
    ||||||||||||||||||    |||||||| |||||||||| ||||| |||||||||||| ||| |||||| || ||||||||    
T  17700150 attagaagattaagacaaccacaaaaggtggaaattgataatctaaaatttatatatatcgtgtcagcaaactgttcaataat 17700232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 27781439 - 27781404
Alignment:
Q  74 tcttgtaagcaaattgctcaataattcatgatgata 109  Q
    ||||||||||||||||||||||||||||||||||||    
T  27781439 tcttgtaagcaaattgctcaataattcatgatgata 27781404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 21898928 - 21899020
Alignment:
Q  16 attagaagattaagacaaatgtaaaaggtgtaaattgataaactaaactttatatatatcttgtaagcaaattgctcaataattcatgatgata 109  Q
    |||||||||||||||||||   |||||||| |||||||| ||| ||| |||||||| ||| ||| |||||| || |||||||| ||| ||||||    
T  21898928 attagaagattaagacaaacacaaaaggtggaaattgat-aaccaaaatttatataaatcgtgtcagcaaactgttcaataatccataatgata 21899020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 27781079 - 27781030
Alignment:
Q  284 tatcatcacttggaagttcgttcaaattcaaattcttcacaacttttgac 333  Q
    |||||||||||||||| |||| |||||  |||||||||||||||||||||    
T  27781079 tatcatcacttggaagctcgtccaaatcaaaattcttcacaacttttgac 27781030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 27777561 - 27777513
Alignment:
Q  285 atcatcacttggaagttcgttcaaattcaaattcttcacaacttttgac 333  Q
    ||||| ||||||||| ||||||||||  |||||||||||||||||||||    
T  27777561 atcattacttggaagctcgttcaaatcaaaattcttcacaacttttgac 27777513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 27782400 - 27782448
Alignment:
Q  285 atcatcacttggaagttcgttcaaattcaaattcttcacaacttttgac 333  Q
    ||||| ||||||||| ||||||||||  |||||||||||||||||||||    
T  27782400 atcattacttggaagctcgttcaaatcaaaattcttcacaacttttgac 27782448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 17663830 - 17663772
Alignment:
Q  16 attagaagattaagacaaatgtaaaaggtgtaaattgataaactaaactttatatatat 74  Q
    |||||||||||||||||||   |||||||| ||||||| || ||||| |||||||||||    
T  17663830 attagaagattaagacaaacacaaaaggtggaaattgaaaatctaaaatttatatatat 17663772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 21899130 - 21899210
Alignment:
Q  189 acactagttggtttcatcttcaaactcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattc 269  Q
    |||||| ||||||||||||||||| || ||||||| || ||| || ||||| |||||| |   |||| |||||||||||||    
T  21899130 acactaattggtttcatcttcaaaatcgtcacttgaaatctcattcaaatcaaaattcatagaaactcttgaccctaattc 21899210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 27781116 - 27781080
Alignment:
Q  214 tcatcacttggaagctcgtttaaatctaaattcttca 250  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  27781116 tcatcacttggaagctcgttcaaatcaaaattcttca 27781080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 144 - 285
Target Start/End: Original strand, 35250109 - 35250250
Alignment:
Q  144 cataatatcattcaaaatcacaaaaaagatataaactaagacgaaacactagttggtttcatcttcaaactcatcacttggaagctcgtttaaatctaaa 243  Q
    ||||||||||||||||||||  |||||||||||||| ||||||| |||||| |||| |||||||||||| |||||||||| ||||||||| ||||| |||    
T  35250109 cataatatcattcaaaatcattaaaaagatataaaccaagacgagacactaattggattcatcttcaaaatcatcacttgcaagctcgttcaaatcaaaa 35250208  T
Q  244 ttcttcacaacttttgaccctaattcaatttcgccttcatta 285  Q
    |||||||||||||||||||| | |||| ||||  ||||||||    
T  35250209 ttcttcacaacttttgacccgatttcagtttcagcttcatta 35250250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 35249944 - 35250037
Alignment:
Q  16 attagaagattaagacaaatgtaaaaggtgtaaattgataaactaaactttatatatatcttgtaagcaaattgctcaataattcatgatgata 109  Q
    ||||||||| |||||||||||||||||||   ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  35249944 attagaagactaagacaaatgtaaaaggtaataattgataatctaaactctatatatatgttgtaagcaaattgctcaataattcatgatgata 35250037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 51220010 - 51220096
Alignment:
Q  189 acactagttggtttcatcttcaaactcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattcaatttc 275  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||  |||| |||||| | |||||| |||||||||||||| ||||    
T  51220010 acactaattggtttcatcttcaaaatcatcacttggaagctcattcgaatcaaaattcataacaactattgaccctaattcagtttc 51220096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 51220797 - 51220883
Alignment:
Q  189 acactagttggtttcatcttcaaactcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattcaatttc 275  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| || || |||||| | |||| | |||||||||||||| ||||    
T  51220797 acactagttggtttcatcttcaaaaccatcacttggaagctcgttcaattcaaaattcataacaattattgaccctaattcagtttc 51220883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 35250178 - 35250226
Alignment:
Q  285 atcatcacttggaagttcgttcaaattcaaattcttcacaacttttgac 333  Q
    ||||||||||| ||| ||||||||||  |||||||||||||||||||||    
T  35250178 atcatcacttgcaagctcgttcaaatcaaaattcttcacaacttttgac 35250226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 440904 - 440985
Alignment:
Q  189 acactagttggtttcatcttcaaactcatcacttggaagctcgtttaaatctaaattcttcacaacttttgaccctaattca 270  Q
    |||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  440904 acactaattagtttcatcttcaaagtcatcacttggaagctcgttcaaatcaaaattcttcacaacttttggccctaattca 440985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 440929 - 440974
Alignment:
Q  286 tcatcacttggaagttcgttcaaattcaaattcttcacaacttttg 331  Q
    |||||||||||||| ||||||||||  |||||||||||||||||||    
T  440929 tcatcacttggaagctcgttcaaatcaaaattcttcacaacttttg 440974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 440807 - 440839
Alignment:
Q  195 gttggtttcatcttcaaactcatcacttggaag 227  Q
    |||||||||||||||||| ||||||||||||||    
T  440807 gttggtttcatcttcaaaatcatcacttggaag 440839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University