View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11700_high_32 (Length: 246)
Name: NF11700_high_32
Description: NF11700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11700_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 43281474 - 43281680
Alignment:
| Q |
15 |
atgaaaacgcttaagcgagaattgaggcttagatagaagagacactttacatttagccttttaacttataccctaaaagcacaagttaacatttttcctt |
114 |
Q |
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| T |
43281474 |
atgaaaacgcttaagcaaaaattgaggcttagatagaagagacactttacatttagccttttaacttatgccctaagagcacaagttaacatttttcctt |
43281573 |
T |
|
| Q |
115 |
atttatttatattatacatctacctgtaagtgtttaactgttaatgctagcaaaatttagcttatgtgaaacactttagcgtataaataccagtcttgta |
214 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43281574 |
at----ttatattatacatctacctgtaagtgtttaactgttaatgctagcaaaacttagcttatgtgaaacactttagcgtataaataccagtcttgta |
43281669 |
T |
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| Q |
215 |
cttgtagttcc |
225 |
Q |
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||||||||||| |
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| T |
43281670 |
cttgtagttcc |
43281680 |
T |
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