View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11700_low_28 (Length: 294)

Name: NF11700_low_28
Description: NF11700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11700_low_28
NF11700_low_28
[»] chr5 (34 HSPs)
chr5 (86-245)||(22633952-22634102)
chr5 (242-280)||(13596925-13596963)
chr5 (243-280)||(1685046-1685083)
chr5 (243-279)||(36366123-36366159)
chr5 (244-279)||(5620643-5620678)
chr5 (244-279)||(7863528-7863563)
chr5 (244-279)||(9702716-9702751)
chr5 (244-279)||(9809820-9809855)
chr5 (244-279)||(22602634-22602669)
chr5 (245-280)||(23920290-23920325)
chr5 (244-279)||(34719465-34719500)
chr5 (245-279)||(3086433-3086467)
chr5 (245-279)||(12702061-12702095)
chr5 (233-275)||(20350836-20350878)
chr5 (245-279)||(25695539-25695573)
chr5 (244-278)||(38041490-38041524)
chr5 (245-279)||(42819330-42819364)
chr5 (242-275)||(4883082-4883115)
chr5 (242-279)||(32977099-32977136)
chr5 (243-279)||(752054-752090)
chr5 (244-276)||(4802095-4802127)
chr5 (247-279)||(14387898-14387930)
chr5 (243-275)||(33931125-33931157)
chr5 (243-275)||(34373667-34373699)
chr5 (244-275)||(17997471-17997502)
chr5 (244-279)||(36884780-36884815)
chr5 (244-279)||(43136273-43136308)
chr5 (245-275)||(19395665-19395695)
chr5 (245-275)||(31295552-31295582)
chr5 (245-275)||(34725259-34725289)
chr5 (245-279)||(41693149-41693183)
chr5 (244-277)||(18037229-18037262)
chr5 (242-275)||(38935359-38935392)
chr5 (247-279)||(19365952-19365984)
[»] chr8 (38 HSPs)
chr8 (231-279)||(12249898-12249946)
chr8 (243-280)||(2680234-2680271)
chr8 (243-280)||(32569575-32569612)
chr8 (244-280)||(4631640-4631676)
chr8 (243-279)||(23626054-23626090)
chr8 (243-279)||(39445261-39445297)
chr8 (243-279)||(41908017-41908053)
chr8 (244-279)||(2961008-2961043)
chr8 (244-279)||(7391329-7391364)
chr8 (244-279)||(18375557-18375592)
chr8 (244-279)||(27272693-27272728)
chr8 (245-280)||(28940714-28940749)
chr8 (244-279)||(36778487-36778522)
chr8 (244-279)||(41158651-41158686)
chr8 (245-279)||(40586443-40586477)
chr8 (242-275)||(42060659-42060692)
chr8 (243-275)||(6300487-6300519)
chr8 (243-279)||(8160418-8160454)
chr8 (243-279)||(8763020-8763056)
chr8 (243-279)||(24055848-24055884)
chr8 (243-275)||(27273889-27273921)
chr8 (243-275)||(36597310-36597342)
chr8 (243-275)||(37029926-37029958)
chr8 (245-280)||(27244398-27244433)
chr8 (245-279)||(1945195-1945229)
chr8 (245-279)||(11697117-11697151)
chr8 (245-275)||(23966383-23966413)
chr8 (245-279)||(29434280-29434314)
chr8 (233-279)||(41978866-41978912)
chr8 (245-275)||(44940529-44940559)
chr8 (243-275)||(5836251-5836283)
chr8 (243-279)||(8307506-8307542)
chr8 (243-275)||(22332003-22332035)
chr8 (243-279)||(25361522-25361558)
chr8 (243-279)||(25833996-25834032)
chr8 (244-280)||(27002438-27002474)
chr8 (243-275)||(30827047-30827079)
chr8 (243-279)||(39204872-39204908)
[»] chr7 (26 HSPs)
chr7 (232-279)||(21669219-21669266)
chr7 (242-279)||(691296-691333)
chr7 (243-279)||(9226019-9226055)
chr7 (243-279)||(17817726-17817762)
chr7 (243-279)||(39278245-39278281)
chr7 (242-278)||(49023321-49023357)
chr7 (244-279)||(12960614-12960649)
chr7 (244-279)||(31896813-31896848)
chr7 (244-279)||(38434277-38434312)
chr7 (244-279)||(39647981-39648016)
chr7 (242-280)||(272588-272626)
chr7 (245-279)||(15595432-15595466)
chr7 (247-279)||(9151426-9151458)
chr7 (243-279)||(11834955-11834991)
chr7 (243-279)||(21597942-21597978)
chr7 (243-279)||(42996948-42996984)
chr7 (243-275)||(47573331-47573363)
chr7 (244-279)||(19049240-19049275)
chr7 (244-279)||(24682277-24682312)
chr7 (244-279)||(27732952-27732987)
chr7 (244-279)||(27840521-27840556)
chr7 (245-279)||(4850460-4850494)
chr7 (245-275)||(6911359-6911389)
chr7 (245-279)||(17172901-17172935)
chr7 (245-279)||(23476587-23476621)
chr7 (243-279)||(2067847-2067883)
[»] chr6 (23 HSPs)
chr6 (242-280)||(18985189-18985227)
chr6 (243-280)||(11681668-11681705)
chr6 (244-280)||(875537-875573)
chr6 (244-280)||(1363229-1363265)
chr6 (243-279)||(6966235-6966271)
chr6 (243-279)||(18389166-18389202)
chr6 (243-279)||(24447802-24447838)
chr6 (243-279)||(33319056-33319092)
chr6 (244-279)||(1932347-1932382)
chr6 (245-279)||(4110068-4110102)
chr6 (243-279)||(5753125-5753161)
chr6 (247-279)||(29737644-29737676)
chr6 (243-279)||(35160130-35160166)
chr6 (244-275)||(2522035-2522066)
chr6 (244-279)||(2624721-2624756)
chr6 (244-279)||(9978707-9978742)
chr6 (244-275)||(13456734-13456765)
chr6 (244-279)||(15043827-15043862)
chr6 (244-275)||(22323798-22323829)
chr6 (244-279)||(33300675-33300710)
chr6 (243-277)||(4425917-4425951)
chr6 (245-275)||(33814888-33814918)
chr6 (243-279)||(33319564-33319600)
[»] chr3 (29 HSPs)
chr3 (242-280)||(41053810-41053848)
chr3 (243-279)||(5240995-5241031)
chr3 (243-279)||(8396773-8396809)
chr3 (243-279)||(22477913-22477949)
chr3 (243-279)||(26776432-26776468)
chr3 (244-279)||(4137399-4137434)
chr3 (244-279)||(18688681-18688716)
chr3 (244-279)||(21165930-21165965)
chr3 (244-279)||(26100777-26100812)
chr3 (244-279)||(35861009-35861044)
chr3 (245-279)||(188743-188777)
chr3 (245-279)||(22522278-22522312)
chr3 (244-278)||(22759056-22759090)
chr3 (242-279)||(16496384-16496421)
chr3 (247-280)||(42614239-42614272)
chr3 (243-275)||(50742307-50742339)
chr3 (243-275)||(54934745-54934777)
chr3 (244-279)||(11950990-11951025)
chr3 (244-279)||(26035813-26035848)
chr3 (245-275)||(5252254-5252284)
chr3 (243-281)||(12157707-12157745)
chr3 (245-279)||(30766513-30766547)
chr3 (243-273)||(31368325-31368355)
chr3 (245-279)||(39576541-39576575)
chr3 (245-279)||(52843192-52843226)
chr3 (243-279)||(15315271-15315308)
chr3 (242-275)||(52852741-52852774)
chr3 (251-279)||(12001433-12001461)
chr3 (243-279)||(19893178-19893214)
[»] scaffold0249 (1 HSPs)
scaffold0249 (242-279)||(24916-24953)
[»] scaffold0069 (1 HSPs)
scaffold0069 (238-279)||(14655-14696)
[»] chr4 (40 HSPs)
chr4 (243-280)||(27892642-27892679)
chr4 (243-279)||(35707656-35707692)
chr4 (243-279)||(39404590-39404626)
chr4 (244-279)||(2118198-2118233)
chr4 (245-280)||(5483040-5483075)
chr4 (244-279)||(5759349-5759384)
chr4 (244-279)||(15650485-15650520)
chr4 (245-279)||(574177-574211)
chr4 (245-279)||(3759287-3759321)
chr4 (245-279)||(12680630-12680664)
chr4 (245-279)||(39713496-39713530)
chr4 (245-279)||(43014591-43014625)
chr4 (243-275)||(2777233-2777265)
chr4 (243-279)||(9887269-9887305)
chr4 (243-275)||(15521080-15521112)
chr4 (243-275)||(19591092-19591124)
chr4 (235-279)||(25898026-25898070)
chr4 (243-275)||(28974021-28974053)
chr4 (243-279)||(29713831-29713867)
chr4 (243-275)||(41983530-41983562)
chr4 (243-279)||(51348074-51348110)
chr4 (244-279)||(1944963-1944998)
chr4 (245-280)||(1975400-1975435)
chr4 (244-275)||(5271601-5271632)
chr4 (244-279)||(8964841-8964876)
chr4 (244-279)||(16653202-16653237)
chr4 (244-275)||(21353975-21354006)
chr4 (244-279)||(26870028-26870063)
chr4 (244-279)||(30527587-30527622)
chr4 (245-279)||(3839095-3839129)
chr4 (245-279)||(8532231-8532265)
chr4 (245-275)||(14828803-14828833)
chr4 (245-279)||(16895957-16895991)
chr4 (245-279)||(56541773-56541807)
chr4 (244-280)||(1694897-1694933)
chr4 (243-279)||(20591011-20591047)
chr4 (243-271)||(23479839-23479867)
chr4 (243-279)||(29706148-29706184)
chr4 (243-279)||(37352108-37352144)
chr4 (243-279)||(37357007-37357043)
[»] chr2 (24 HSPs)
chr2 (242-279)||(7364787-7364824)
chr2 (243-278)||(1691425-1691460)
chr2 (244-279)||(4289027-4289062)
chr2 (244-279)||(9542629-9542664)
chr2 (245-280)||(25124044-25124079)
chr2 (245-280)||(45003662-45003697)
chr2 (243-280)||(15084296-15084333)
chr2 (242-275)||(26828471-26828504)
chr2 (243-280)||(30922096-30922133)
chr2 (243-275)||(6342727-6342759)
chr2 (243-279)||(28609960-28609996)
chr2 (243-275)||(33908203-33908235)
chr2 (243-275)||(37224026-37224058)
chr2 (243-279)||(42782681-42782717)
chr2 (244-275)||(5253306-5253337)
chr2 (244-279)||(19484616-19484651)
chr2 (244-275)||(35285583-35285614)
chr2 (245-275)||(1992950-1992980)
chr2 (245-279)||(9916707-9916741)
chr2 (245-275)||(11707585-11707615)
chr2 (242-279)||(10874396-10874433)
chr2 (247-279)||(19488283-19488315)
chr2 (246-274)||(25573918-25573946)
chr2 (243-275)||(45204293-45204325)
[»] chr1 (31 HSPs)
chr1 (238-279)||(3929741-3929782)
chr1 (243-280)||(29693394-29693431)
chr1 (243-280)||(48183174-48183211)
chr1 (243-279)||(4893975-4894011)
chr1 (243-279)||(10763595-10763631)
chr1 (243-279)||(28565428-28565464)
chr1 (243-279)||(28631818-28631854)
chr1 (243-279)||(42682599-42682635)
chr1 (244-280)||(52037390-52037426)
chr1 (243-278)||(23909714-23909749)
chr1 (244-279)||(29840689-29840724)
chr1 (244-279)||(38896822-38896857)
chr1 (244-279)||(47137866-47137901)
chr1 (242-279)||(13662116-13662153)
chr1 (243-279)||(1375989-1376025)
chr1 (243-279)||(19320419-19320455)
chr1 (243-279)||(22194466-22194502)
chr1 (243-279)||(29184476-29184512)
chr1 (243-275)||(45005717-45005749)
chr1 (244-279)||(20767563-20767598)
chr1 (244-279)||(24289200-24289235)
chr1 (244-279)||(28573167-28573202)
chr1 (244-279)||(33074231-33074266)
chr1 (244-275)||(44407305-44407336)
chr1 (244-275)||(50394966-50394997)
chr1 (245-275)||(24294880-24294910)
chr1 (245-275)||(31620610-31620640)
chr1 (245-279)||(33363579-33363613)
chr1 (245-275)||(43254555-43254585)
chr1 (243-275)||(12245170-12245202)
chr1 (243-279)||(34265874-34265910)
[»] scaffold0484 (1 HSPs)
scaffold0484 (243-279)||(8174-8210)
[»] scaffold0103 (1 HSPs)
scaffold0103 (243-279)||(13030-13066)
[»] scaffold0088 (1 HSPs)
scaffold0088 (243-279)||(52691-52727)
[»] scaffold0057 (1 HSPs)
scaffold0057 (244-279)||(17400-17435)
[»] scaffold0051 (2 HSPs)
scaffold0051 (245-279)||(61720-61754)
scaffold0051 (242-279)||(55567-55604)
[»] scaffold0006 (2 HSPs)
scaffold0006 (242-279)||(151878-151915)
scaffold0006 (243-279)||(64401-64437)
[»] scaffold0381 (1 HSPs)
scaffold0381 (243-279)||(11239-11275)
[»] scaffold0171 (1 HSPs)
scaffold0171 (244-275)||(29638-29669)
[»] scaffold0027 (1 HSPs)
scaffold0027 (244-279)||(143213-143248)
[»] scaffold0047 (1 HSPs)
scaffold0047 (245-275)||(25614-25644)
[»] scaffold0005 (1 HSPs)
scaffold0005 (245-275)||(10876-10906)
[»] scaffold0001 (1 HSPs)
scaffold0001 (246-280)||(12961-12995)
[»] scaffold0026 (1 HSPs)
scaffold0026 (243-280)||(92631-92668)
[»] scaffold0242 (1 HSPs)
scaffold0242 (243-275)||(2707-2739)
[»] scaffold0231 (1 HSPs)
scaffold0231 (244-272)||(10808-10836)
[»] scaffold0016 (1 HSPs)
scaffold0016 (247-275)||(101652-101680)
[»] scaffold0009 (1 HSPs)
scaffold0009 (244-280)||(139581-139617)


Alignment Details
Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 86 - 245
Target Start/End: Original strand, 22633952 - 22634102
Alignment:
Q  86 caaaactcataaaacacgacacaccaaggctaggatgtgattgctttt-atatttcctttcatctaaaaccttaatatgagtttatgaacttttacaaac 184  Q
    ||||||||||||||||||||||||      | ||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||        
T  22633952 caaaactcataaaacacgacacac------tgggatgtgattgatttttatatttcctttcatctaaaaccttaatctgagtttatgaacttttac---- 22634041  T
Q  185 taagtacagtgccaatctattaactgctgtttaagttgtgcgtgtaatttttattagcaaa 245  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  22634042 taagtacagtgccaatctattaactgttgtttaagttgtgcgtgtaatttttattaccaaa 22634102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 13596963 - 13596925
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13596963 caaactagttacaaacccgtgcttcgcacgggttgaatt 13596925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 1685046 - 1685083
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1685046 aaactagttacaaacccgtgcttcgcacgggttgaatt 1685083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 36366123 - 36366159
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  36366123 aaactagttacaaacccgtgcttcgcacgggttgaat 36366159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 5620643 - 5620678
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  5620643 aactagttacaaacccgtgcttcgcacgggttgaat 5620678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 7863528 - 7863563
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  7863528 aactagttacaaacccgtgcttcgcacgggttgaat 7863563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 9702751 - 9702716
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  9702751 aactagttacaaacccgtgcttcgcacgggttgaat 9702716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 9809820 - 9809855
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  9809820 aactagttacaaacccgtgcttcgcacgggttgaat 9809855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 22602634 - 22602669
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  22602634 aactagttacaaacccgtgcttcgcacgggttgaat 22602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 23920325 - 23920290
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  23920325 actagttacaaacccgtgcttcgcacgggttgaatt 23920290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 34719500 - 34719465
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  34719500 aactagttacaaacccgtgcttcgcacgggttgaat 34719465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 3086433 - 3086467
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  3086433 actagttacaaacccgtgcttcgcacgggttgaat 3086467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 12702061 - 12702095
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  12702061 actagttacaaacccgtgcttcgcacgggttgaat 12702095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 20350878 - 20350836
Alignment:
Q  233 ttttattagcaaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  20350878 ttttcttaacaaactagttacaaacccgtgcttcgcacgggtt 20350836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 25695539 - 25695573
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  25695539 actagttacaaacccgtgcttcgcacgggttgaat 25695573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 38041490 - 38041524
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaa 278  Q
    |||||||||||||||||||||||||||||||||||    
T  38041490 aactagttacaaacccgtgcttcgcacgggttgaa 38041524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 42819330 - 42819364
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  42819330 actagttacaaacccgtgcttcgcacgggttgaat 42819364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 4883115 - 4883082
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||||    
T  4883115 caaactagttacaaacccgtgcttcgcacgggtt 4883082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 32977099 - 32977136
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  32977099 caaactagttacaaaccggtgcttcgcacgggttgaat 32977136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 752054 - 752090
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  752054 aaactagttacaaacccgtgctttgcacgggttgaat 752090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 276
Target Start/End: Original strand, 4802095 - 4802127
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttg 276  Q
    |||||||||||||||||||||||||||||||||    
T  4802095 aactagttacaaacccgtgcttcgcacgggttg 4802127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 279
Target Start/End: Original strand, 14387898 - 14387930
Alignment:
Q  247 tagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||    
T  14387898 tagttacaaacccgtgcttcgcacgggttgaat 14387930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 33931157 - 33931125
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  33931157 aaactagttacaaacccgtgcttcgcacgggtt 33931125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 34373667 - 34373699
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  34373667 aaactagttacaaacccgtgcttcgcacgggtt 34373699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 17997502 - 17997471
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  17997502 aactagttacaaacccgtgcttcgcacgggtt 17997471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 36884780 - 36884815
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| ||||||||||||    
T  36884780 aactagttacaaacccgtgcttcacacgggttgaat 36884815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 43136273 - 43136308
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| |||||||||||||    
T  43136273 aactagttacaaacccgtgctttgcacgggttgaat 43136308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 19395695 - 19395665
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  19395695 actagttacaaacccgtgcttcgcacgggtt 19395665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 31295552 - 31295582
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  31295552 actagttacaaacccgtgcttcgcacgggtt 31295582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 34725259 - 34725289
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  34725259 actagttacaaacccgtgcttcgcacgggtt 34725289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 41693183 - 41693149
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||| |||||||||||||||||||||    
T  41693183 actagttacaaactcgtgcttcgcacgggttgaat 41693149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 277
Target Start/End: Original strand, 18037229 - 18037262
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttga 277  Q
    |||||||||||||| |||||||||||||||||||    
T  18037229 aactagttacaaactcgtgcttcgcacgggttga 18037262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 38935392 - 38935359
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||| |||||||    
T  38935392 caaactagttacaaacccgtgcttcgtacgggtt 38935359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 19365984 - 19365952
Alignment:
Q  247 tagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||    
T  19365984 tagttacaaacccgtgcttcgcatgggttgaat 19365952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 12249898 - 12249946
Alignment:
Q  231 atttttattagcaaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  12249898 atttttattacaaaactagttacaaacccgtgcttcgcacgggttgaat 12249946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 2680234 - 2680271
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2680234 aaactagttacaaacccgtgcttcgcacgggttgaatt 2680271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 32569575 - 32569612
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32569575 aaactagttacaaacccgtgcttcgcacgggttgaatt 32569612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 4631640 - 4631676
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  4631640 aactagttacaaacccgtgcttcgcacgggttgaatt 4631676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 23626054 - 23626090
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  23626054 aaactagttacaaacccgtgcttcgcacgggttgaat 23626090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 39445297 - 39445261
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  39445297 aaactagttacaaacccgtgcttcgcacgggttgaat 39445261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 41908053 - 41908017
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  41908053 aaactagttacaaacccgtgcttcgcacgggttgaat 41908017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 2961008 - 2961043
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  2961008 aactagttacaaacccgtgcttcgcacgggttgaat 2961043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 7391364 - 7391329
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  7391364 aactagttacaaacccgtgcttcgcacgggttgaat 7391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 18375557 - 18375592
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  18375557 aactagttacaaacccgtgcttcgcacgggttgaat 18375592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 27272728 - 27272693
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  27272728 aactagttacaaacccgtgcttcgcacgggttgaat 27272693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 28940714 - 28940749
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  28940714 actagttacaaacccgtgcttcgcacgggttgaatt 28940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 36778522 - 36778487
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  36778522 aactagttacaaacccgtgcttcgcacgggttgaat 36778487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 41158686 - 41158651
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  41158686 aactagttacaaacccgtgcttcgcacgggttgaat 41158651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 40586443 - 40586477
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  40586443 actagttacaaacccgtgcttcgcacgggttgaat 40586477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 275
Target Start/End: Original strand, 42060659 - 42060692
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||||    
T  42060659 caaactagttacaaacccgtgcttcgcacgggtt 42060692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 6300487 - 6300519
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  6300487 aaactagttacaaacccgtgcttcgcacgggtt 6300519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 8160418 - 8160454
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  8160418 aaactagttacaaacccgtgctttgcacgggttgaat 8160454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 8763056 - 8763020
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  8763056 aaactagttacaaacccgtgctttgcacgggttgaat 8763020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 24055884 - 24055848
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||| ||||||||    
T  24055884 aaactagttacaaacccgtgcttcgcacaggttgaat 24055848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 27273921 - 27273889
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  27273921 aaactagttacaaacccgtgcttcgcacgggtt 27273889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 36597310 - 36597342
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  36597310 aaactagttacaaacccgtgcttcgcacgggtt 36597342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 37029958 - 37029926
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  37029958 aaactagttacaaacccgtgcttcgcacgggtt 37029926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 27244398 - 27244433
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||| ||||||||||||||||||||    
T  27244398 actagttacaaacccatgcttcgcacgggttgaatt 27244433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 1945229 - 1945195
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||| |||||||||||||    
T  1945229 actagttacaaacccgtgctttgcacgggttgaat 1945195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 11697151 - 11697117
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||| |||||||||||||    
T  11697151 actagttacaaacccgtgctttgcacgggttgaat 11697117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 23966383 - 23966413
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  23966383 actagttacaaacccgtgcttcgcacgggtt 23966413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 29434314 - 29434280
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  29434314 actagttacaaacccgtgcttcacacgggttgaat 29434280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 41978912 - 41978866
Alignment:
Q  233 ttttattagcaaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||| | |||||||||| |||| |||||||||||||||||||||    
T  41978912 ttttatttgtaaactagttagaaactcgtgcttcgcacgggttgaat 41978866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 44940559 - 44940529
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  44940559 actagttacaaacccgtgcttcgcacgggtt 44940529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 5836283 - 5836251
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||| ||||||||||||||||    
T  5836283 aaactagttacaaacctgtgcttcgcacgggtt 5836251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 8307506 - 8307542
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||| |||||||||||||||||||||| |||||||    
T  8307506 aaactaattacaaacccgtgcttcgcacgtgttgaat 8307542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 22332003 - 22332035
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||| ||||||||||||||||||||    
T  22332003 aaactagttacagacccgtgcttcgcacgggtt 22332035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 25361558 - 25361522
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||| |||||| |||||    
T  25361558 aaactagttacaaacccgtgcttcacacgggatgaat 25361522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 25833996 - 25834032
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  25833996 aaactagttacaaacccgtgctttgcacggattgaat 25834032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 27002438 - 27002474
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  27002438 aactagtcacaaactcgtgcttcgcacgggttgaatt 27002474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 30827079 - 30827047
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||| |||||||    
T  30827079 aaactagttacaaacccgtgcttcgtacgggtt 30827047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 39204908 - 39204872
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  39204908 aaactagttacaaacccgtgctttgcacaggttgaat 39204872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 21669219 - 21669266
Alignment:
Q  232 tttttattagcaaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  21669219 ttttttttaacaaactagttacaaacccgtgcttcgcacgggttgaat 21669266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 691333 - 691296
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||||    
T  691333 caaactagttacaaacccgtgcttcgcacgggttgaat 691296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 9226019 - 9226055
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  9226019 aaactagttacaaacccgtgcttcgcacgggttgaat 9226055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 17817762 - 17817726
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  17817762 aaactagttacaaacccgtgcttcgcacgggttgaat 17817726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 39278281 - 39278245
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  39278281 aaactagttacaaacccgtgcttcgcacgggttgaat 39278245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 49023357 - 49023321
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaa 278  Q
    |||||||||||||||||||||||||||||||||||||    
T  49023357 caaactagttacaaacccgtgcttcgcacgggttgaa 49023321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 12960649 - 12960614
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  12960649 aactagttacaaacccgtgcttcgcacgggttgaat 12960614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 31896813 - 31896848
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  31896813 aactagttacaaacccgtgcttcgcacgggttgaat 31896848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 38434277 - 38434312
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  38434277 aactagttacaaacccgtgcttcgcacgggttgaat 38434312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 39647981 - 39648016
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  39647981 aactagttacaaacccgtgcttcgcacgggttgaat 39648016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 272588 - 272626
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  272588 caaactagttacaaatccgtgcttcgcacgggttgaatt 272626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 15595466 - 15595432
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  15595466 actagttacaaacccgtgcttcgcacgggttgaat 15595432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 9151458 - 9151426
Alignment:
Q  247 tagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||    
T  9151458 tagttacaaacccgtgcttcgcacgggttgaat 9151426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 11834955 - 11834991
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||| |||||||||||||||||||||||||||    
T  11834955 aaactagttccaaacccgtgcttcgcacgggttgaat 11834991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 21597942 - 21597978
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||| |||||||||||||||||||||||||||    
T  21597942 aaactagttccaaacccgtgcttcgcacgggttgaat 21597978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 42996984 - 42996948
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||| ||||||||    
T  42996984 aaactagttacaaacccgtgcttcgcacaggttgaat 42996948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 47573331 - 47573363
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  47573331 aaactagttacaaacccgtgcttcgcacgggtt 47573363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 19049240 - 19049275
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||| |||||||||||||||||    
T  19049240 aactagttacaaacccgtacttcgcacgggttgaat 19049275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 24682277 - 24682312
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| |||||||||||||    
T  24682277 aactagttacaaacccgtgctttgcacgggttgaat 24682312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 27732952 - 27732987
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||| ||||||||    
T  27732952 aactagttacaaacccgtgcttcgcactggttgaat 27732987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 27840556 - 27840521
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| |||||||||||||    
T  27840556 aactagttacaaacccgtgctttgcacgggttgaat 27840521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 4850494 - 4850460
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  4850494 actagttacaaacccgtgcttcacacgggttgaat 4850460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 6911359 - 6911389
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  6911359 actagttacaaacccgtgcttcgcacgggtt 6911389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 17172935 - 17172901
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||| ||||||    
T  17172935 actagttacaaacccgtgcttcgcacggattgaat 17172901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 23476587 - 23476621
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  23476587 actagttacaaacccgtgcttcacacgggttgaat 23476621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 2067847 - 2067883
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  2067847 aaactagttacaaatccgtgcttcgcacggattgaat 2067883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 18985189 - 18985227
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18985189 caaactagttacaaacccgtgcttcgcacgggttgaatt 18985227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 11681668 - 11681705
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11681668 aaactagttacaaacccgtgcttcgcacgggttgaatt 11681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 875573 - 875537
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  875573 aactagttacaaacccgtgcttcgcacgggttgaatt 875537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 1363265 - 1363229
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  1363265 aactagttacaaacccgtgcttcgcacgggttgaatt 1363229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 6966235 - 6966271
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  6966235 aaactagttacaaacccgtgcttcgcacgggttgaat 6966271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 18389166 - 18389202
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  18389166 aaactagttacaaacccgtgcttcgcacgggttgaat 18389202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 24447838 - 24447802
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  24447838 aaactagttacaaacccgtgcttcgcacgggttgaat 24447802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 33319092 - 33319056
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  33319092 aaactagttacaaacccgtgcttcgcacgggttgaat 33319056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 1932382 - 1932347
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  1932382 aactagttacaaacccgtgcttcgcacgggttgaat 1932347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 4110102 - 4110068
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  4110102 actagttacaaacccgtgcttcgcacgggttgaat 4110068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 5753125 - 5753161
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5753125 aaactagttacaaacccgtacttcgcacgggttgaat 5753161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 29737676 - 29737644
Alignment:
Q  247 tagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||    
T  29737676 tagttacaaacccgtgcttcgcacgggttgaat 29737644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 35160166 - 35160130
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||| ||||||||||||||||||||||    
T  35160166 aaactagttacaaatccgtgcttcgcacgggttgaat 35160130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 2522066 - 2522035
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  2522066 aactagttacaaacccgtgcttcgcacgggtt 2522035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 2624721 - 2624756
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||| |||||||||||||||    
T  2624721 aactagttacaaacccgtgcatcgcacgggttgaat 2624756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 9978707 - 9978742
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||| |||||||||||||||||||||    
T  9978707 aactagttacaaactcgtgcttcgcacgggttgaat 9978742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 13456734 - 13456765
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  13456734 aactagttacaaacccgtgcttcgcacgggtt 13456765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 15043827 - 15043862
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||| ||||||    
T  15043827 aactagttacaaacccgtgcttcgcacggattgaat 15043862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 22323829 - 22323798
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  22323829 aactagttacaaacccgtgcttcgcacgggtt 22323798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 33300710 - 33300675
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||| |||||||||||||||||    
T  33300710 aactagttacaaacccgtacttcgcacgggttgaat 33300675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Complemental strand, 4425951 - 4425917
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttga 277  Q
    |||||||||||||||||||| ||||||||||||||    
T  4425951 aaactagttacaaacccgtgtttcgcacgggttga 4425917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 33814918 - 33814888
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  33814918 actagttacaaacccgtgcttcgcacgggtt 33814888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 33319564 - 33319600
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||| |||||||||||||| |||||||    
T  33319564 aaactagttacaaatccgtgcttcgcacgagttgaat 33319600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 41053848 - 41053810
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41053848 caaactagttacaaacccgtgcttcgcacgggttgaatt 41053810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 5241031 - 5240995
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  5241031 aaactagttacaaacccgtgcttcgcacgggttgaat 5240995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 8396809 - 8396773
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  8396809 aaactagttacaaacccgtgcttcgcacgggttgaat 8396773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 22477949 - 22477913
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  22477949 aaactagttacaaacccgtgcttcgcacgggttgaat 22477913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 26776432 - 26776468
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  26776432 aaactagttacaaacccgtgcttcgcacgggttgaat 26776468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 4137399 - 4137434
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  4137399 aactagttacaaacccgtgcttcgcacgggttgaat 4137434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 18688716 - 18688681
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  18688716 aactagttacaaacccgtgcttcgcacgggttgaat 18688681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 21165930 - 21165965
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  21165930 aactagttacaaacccgtgcttcgcacgggttgaat 21165965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 26100777 - 26100812
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  26100777 aactagttacaaacccgtgcttcgcacgggttgaat 26100812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 35861044 - 35861009
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  35861044 aactagttacaaacccgtgcttcgcacgggttgaat 35861009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 188777 - 188743
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  188777 actagttacaaacccgtgcttcgcacgggttgaat 188743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 22522312 - 22522278
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  22522312 actagttacaaacccgtgcttcgcacgggttgaat 22522278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 22759056 - 22759090
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaa 278  Q
    |||||||||||||||||||||||||||||||||||    
T  22759056 aactagttacaaacccgtgcttcgcacgggttgaa 22759090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 16496421 - 16496384
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||| |||||||||||||||||||||||||||||||||    
T  16496421 caaattagttacaaacccgtgcttcgcacgggttgaat 16496384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 42614239 - 42614272
Alignment:
Q  247 tagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||    
T  42614239 tagttacaaacccgtgcttcgcacgggttgaatt 42614272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 50742339 - 50742307
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  50742339 aaactagttacaaacccgtgcttcgcacgggtt 50742307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 54934777 - 54934745
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  54934777 aaactagttacaaacccgtgcttcgcacgggtt 54934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 11950990 - 11951025
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||| |||||||||||||||||||    
T  11950990 aactagttacaaacccatgcttcgcacgggttgaat 11951025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 26035813 - 26035848
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||| |||||||||||||||    
T  26035813 aactagttacaaacccgtgcgtcgcacgggttgaat 26035848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 5252254 - 5252284
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  5252254 actagttacaaacccgtgcttcgcacgggtt 5252284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 12157707 - 12157745
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaattt 281  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  12157707 aaactagttacaaatccgtacttcgcacgggttgaattt 12157745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 30766547 - 30766513
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||| ||||||||||||||||||||    
T  30766547 actagttacaaacctgtgcttcgcacgggttgaat 30766513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 273
Target Start/End: Original strand, 31368325 - 31368355
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacggg 273  Q
    |||||||||||||||||||||||||||||||    
T  31368325 aaactagttacaaacccgtgcttcgcacggg 31368355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 39576575 - 39576541
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||| |||||||    
T  39576575 actagttacaaacccgtgcttcgcacgagttgaat 39576541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 52843226 - 52843192
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||| |||||||    
T  52843226 actagttacaaacccgtgcttcgcacgagttgaat 52843192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 15315271 - 15315308
Alignment:
Q  243 aaactagttacaaacccgtgc-ttcgcacgggttgaat 279  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15315271 aaactagttacaaacccgtgctttcgcacgggttgaat 15315308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 275
Target Start/End: Original strand, 52852741 - 52852774
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||| |||||||||||||||||    
T  52852741 caaactagttacaaactcgtgcttcgcacgggtt 52852774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 279
Target Start/End: Original strand, 12001433 - 12001461
Alignment:
Q  251 tacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||    
T  12001433 tacaaacccgtgcttcgcacgggttgaat 12001461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 19893178 - 19893214
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||  |||||||||||    
T  19893178 aaactagttacaaacccgtgcttcatacgggttgaat 19893214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 24916 - 24953
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24916 caaactagttacaaacccgtgcttcgcacgggttgaat 24953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 14696 - 14655
Alignment:
Q  238 ttagcaaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  14696 ttagaaaactagttacaaacccgtgcttcgcacgggttgaat 14655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 27892642 - 27892679
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27892642 aaactagttacaaacccgtgcttcgcacgggttgaatt 27892679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 35707656 - 35707692
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  35707656 aaactagttacaaacccgtgcttcgcacgggttgaat 35707692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 39404590 - 39404626
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  39404590 aaactagttacaaacccgtgcttcgcacgggttgaat 39404626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 2118233 - 2118198
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  2118233 aactagttacaaacccgtgcttcgcacgggttgaat 2118198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 5483075 - 5483040
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  5483075 actagttacaaacccgtgcttcgcacgggttgaatt 5483040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 5759384 - 5759349
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  5759384 aactagttacaaacccgtgcttcgcacgggttgaat 5759349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 15650485 - 15650520
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  15650485 aactagttacaaacccgtgcttcgcacgggttgaat 15650520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 574177 - 574211
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  574177 actagttacaaacccgtgcttcgcacgggttgaat 574211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 3759321 - 3759287
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  3759321 actagttacaaacccgtgcttcgcacgggttgaat 3759287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 12680630 - 12680664
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  12680630 actagttacaaacccgtgcttcgcacgggttgaat 12680664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 39713496 - 39713530
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  39713496 actagttacaaacccgtgcttcgcacgggttgaat 39713530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 43014591 - 43014625
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  43014591 actagttacaaacccgtgcttcgcacgggttgaat 43014625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 2777265 - 2777233
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  2777265 aaactagttacaaacccgtgcttcgcacgggtt 2777233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 9887269 - 9887305
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  9887269 aaactagttacaaacccgtgctttgcacgggttgaat 9887305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 15521112 - 15521080
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  15521112 aaactagttacaaacccgtgcttcgcacgggtt 15521080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 19591124 - 19591092
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  19591124 aaactagttacaaacccgtgcttcgcacgggtt 19591092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 25898026 - 25898070
Alignment:
Q  235 ttattagcaaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||| |||||||||||||| |||| |||||||||||||||||    
T  25898026 ttattagtaaactagttacaaatccgtacttcgcacgggttgaat 25898070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 28974053 - 28974021
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  28974053 aaactagttacaaacccgtgcttcgcacgggtt 28974021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 29713867 - 29713831
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  29713867 aaactagttacaaacccgtgctttgcacgggttgaat 29713831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 41983530 - 41983562
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  41983530 aaactagttacaaacccgtgcttcgcacgggtt 41983562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 51348110 - 51348074
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||| ||||||||||||||||    
T  51348110 aaactagttacaaacccgtgtttcgcacgggttgaat 51348074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 1944998 - 1944963
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||| ||||||||||||||||||||||||||    
T  1944998 aactagttataaacccgtgcttcgcacgggttgaat 1944963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 1975435 - 1975400
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||| ||||||||||||||||||||    
T  1975435 actagttacaaacccatgcttcgcacgggttgaatt 1975400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 5271601 - 5271632
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  5271601 aactagttacaaacccgtgcttcgcacgggtt 5271632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 8964876 - 8964841
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| |||||||||||||    
T  8964876 aactagttacaaacccgtgctttgcacgggttgaat 8964841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 16653237 - 16653202
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| |||||||||||||    
T  16653237 aactagttacaaacccgtgctttgcacgggttgaat 16653202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 21354006 - 21353975
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  21354006 aactagttacaaacccgtgcttcgcacgggtt 21353975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 26870028 - 26870063
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| |||||||||||||    
T  26870028 aactagttacaaacccgtgctttgcacgggttgaat 26870063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 30527587 - 30527622
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||| |||||||||||    
T  30527587 aactagttacaaacccgtgcttcgtacgggttgaat 30527622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 3839095 - 3839129
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||| |||||||||    
T  3839095 actagttacaaacccgtgcttcgcaagggttgaat 3839129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 8532265 - 8532231
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||| ||||||||||||||||||||||    
T  8532265 actagttacaaatccgtgcttcgcacgggttgaat 8532231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 14828803 - 14828833
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  14828803 actagttacaaacccgtgcttcgcacgggtt 14828833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 16895991 - 16895957
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||| |||||||||||||||||||    
T  16895991 actagttacaaacccatgcttcgcacgggttgaat 16895957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 56541807 - 56541773
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||| ||||||||||||||||||||    
T  56541807 actagttacaaacctgtgcttcgcacgggttgaat 56541773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 1694933 - 1694897
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||| || ||||||||||||||||||    
T  1694933 aactagttacaaacctgtacttcgcacgggttgaatt 1694897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 20591047 - 20591011
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||| |||||||||||||||||||| |||||||||    
T  20591047 aaactacttacaaacccgtgcttcgcatgggttgaat 20591011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 23479867 - 23479839
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacg 271  Q
    |||||||||||||||||||||||||||||    
T  23479867 aaactagttacaaacccgtgcttcgcacg 23479839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 29706148 - 29706184
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  29706148 aaactagttataaacccgtgcttcgcacggattgaat 29706184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 37352144 - 37352108
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  37352144 aaactagttacaaacccgtgctttgcacaggttgaat 37352108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 37357043 - 37357007
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  37357043 aaactagttacaaacccgtgctttgcacaggttgaat 37357007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 7364824 - 7364787
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7364824 caaactagttacaaacccgtgcttcgcacgggttgaat 7364787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 278
Target Start/End: Original strand, 1691425 - 1691460
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaa 278  Q
    ||||||||||||||||||||||||||||||||||||    
T  1691425 aaactagttacaaacccgtgcttcgcacgggttgaa 1691460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 4289027 - 4289062
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  4289027 aactagttacaaacccgtgcttcgcacgggttgaat 4289062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 9542629 - 9542664
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  9542629 aactagttacaaacccgtgcttcgcacgggttgaat 9542664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 25124044 - 25124079
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  25124044 actagttacaaacccgtgcttcgcacgggttgaatt 25124079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 45003662 - 45003697
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  45003662 actagttacaaacccgtgcttcgcacgggttgaatt 45003697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 15084296 - 15084333
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15084296 aaactagttacaaactcgtgcttcgcacgggttgaatt 15084333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 26828504 - 26828471
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||||    
T  26828504 caaactagttacaaacccgtgcttcgcacgggtt 26828471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 30922096 - 30922133
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||||||||||||||||| |||||||||||||    
T  30922096 aaactagttacaaacccgtgcttcacacgggttgaatt 30922133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 6342727 - 6342759
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  6342727 aaactagttacaaacccgtgcttcgcacgggtt 6342759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 28609996 - 28609960
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  28609996 aaactagttacaaacccgtgctttgcacgggttgaat 28609960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 33908235 - 33908203
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  33908235 aaactagttacaaacccgtgcttcgcacgggtt 33908203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 37224058 - 37224026
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  37224058 aaactagttacaaacccgtgcttcgcacgggtt 37224026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 42782717 - 42782681
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||| ||||||||||||    
T  42782717 aaactagttacaaacccgtgcttcacacgggttgaat 42782681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 5253337 - 5253306
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  5253337 aactagttacaaacccgtgcttcgcacgggtt 5253306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 19484616 - 19484651
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||| |||||||||||||||||||||||||||    
T  19484616 aactagttgcaaacccgtgcttcgcacgggttgaat 19484651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 35285583 - 35285614
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  35285583 aactagttacaaacccgtgcttcgcacgggtt 35285614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 1992950 - 1992980
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  1992950 actagttacaaacccgtgcttcgcacgggtt 1992980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 9916707 - 9916741
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||| ||||||||    
T  9916707 actagttacaaacccgtgcttcgcacaggttgaat 9916741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 11707615 - 11707585
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  11707615 actagttacaaacccgtgcttcgcacgggtt 11707585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 10874396 - 10874433
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  10874396 caaactagttacaatcccgtgcttcgcacgagttgaat 10874433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 19488315 - 19488283
Alignment:
Q  247 tagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||| ||||||||||||||||    
T  19488315 tagttacaaacccgtgtttcgcacgggttgaat 19488283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 274
Target Start/End: Original strand, 25573918 - 25573946
Alignment:
Q  246 ctagttacaaacccgtgcttcgcacgggt 274  Q
    |||||||||||||||||||||||||||||    
T  25573918 ctagttacaaacccgtgcttcgcacgggt 25573946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 45204293 - 45204325
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||| |||||||||||||||||    
T  45204293 aaactagttacaaactcgtgcttcgcacgggtt 45204325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 3929741 - 3929782
Alignment:
Q  238 ttagcaaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  3929741 ttagtaaactagttacaaacccgtgcttcgcacgggttgaat 3929782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 29693431 - 29693394
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29693431 aaactagttacaaacccgtgcttcgcacgggttgaatt 29693394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 48183174 - 48183211
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48183174 aaactagttacaaacccgtgcttcgcacgggttgaatt 48183211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 4894011 - 4893975
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  4894011 aaactagttacaaacccgtgcttcgcacgggttgaat 4893975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 10763631 - 10763595
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  10763631 aaactagttacaaacccgtgcttcgcacgggttgaat 10763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 28565428 - 28565464
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  28565428 aaactagttacaaacccgtgcttcgcacgggttgaat 28565464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 28631854 - 28631818
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  28631854 aaactagttacaaacccgtgcttcgcacgggttgaat 28631818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 42682635 - 42682599
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  42682635 aaactagttacaaacccgtgcttcgcacgggttgaat 42682599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 52037390 - 52037426
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  52037390 aactagttacaaacccgtgcttcgcacgggttgaatt 52037426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 278
Target Start/End: Original strand, 23909714 - 23909749
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaa 278  Q
    ||||||||||||||||||||||||||||||||||||    
T  23909714 aaactagttacaaacccgtgcttcgcacgggttgaa 23909749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 29840689 - 29840724
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  29840689 aactagttacaaacccgtgcttcgcacgggttgaat 29840724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 38896857 - 38896822
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  38896857 aactagttacaaacccgtgcttcgcacgggttgaat 38896822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 47137901 - 47137866
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  47137901 aactagttacaaacccgtgcttcgcacgggttgaat 47137866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 13662116 - 13662153
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||| |||||||||||||||||||||||||||||||||    
T  13662116 caaattagttacaaacccgtgcttcgcacgggttgaat 13662153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 1376025 - 1375989
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  1376025 aaactagttacaaacccgtgctttgcacgggttgaat 1375989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 19320419 - 19320455
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  19320419 aaactagttacaaacccgtgctttgcacgggttgaat 19320455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 22194466 - 22194502
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  22194466 aaactagttacaaacccgtgctttgcacgggttgaat 22194502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 29184476 - 29184512
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||| ||||||    
T  29184476 aaactagttacaaacccgtgcttcgcacggattgaat 29184512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 45005749 - 45005717
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||||    
T  45005749 aaactagttacaaacccgtgcttcgcacgggtt 45005717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 20767598 - 20767563
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||| ||||||    
T  20767598 aactagttacaaacccgtgcttcgcacggcttgaat 20767563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 24289200 - 24289235
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| |||||||||||||    
T  24289200 aactagttacaaacccgtgctttgcacgggttgaat 24289235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 28573202 - 28573167
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| |||||||||||||    
T  28573202 aactagttacaaacccgtgctttgcacgggttgaat 28573167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 33074231 - 33074266
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||| |||||||||||||    
T  33074231 aactagttacaaacccgtgctttgcacgggttgaat 33074266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 44407336 - 44407305
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  44407336 aactagttacaaacccgtgcttcgcacgggtt 44407305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 50394966 - 50394997
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  50394966 aactagttacaaacccgtgcttcgcacgggtt 50394997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 24294910 - 24294880
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  24294910 actagttacaaacccgtgcttcgcacgggtt 24294880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 31620640 - 31620610
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  31620640 actagttacaaacccgtgcttcgcacgggtt 31620610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 33363613 - 33363579
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||| ||||||    
T  33363613 actagttacaaacccgtgcttcgcacggattgaat 33363579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 43254555 - 43254585
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  43254555 actagttacaaacccgtgcttcgcacgggtt 43254585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 12245170 - 12245202
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||| |||||||||    
T  12245170 aaactagttacaaacccgtgctttgcacgggtt 12245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 34265874 - 34265910
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  34265874 aaactaattacaaacctgtgcttcgcacgggttgaat 34265910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 8174 - 8210
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  8174 aaactagttacaaacccgtgcttcgcacgggttgaat 8210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 13066 - 13030
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  13066 aaactagttacaaacccgtgcttcgcacgggttgaat 13030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 52691 - 52727
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  52691 aaactagttacaaacccgtgcttcgcacgggttgaat 52727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 17400 - 17435
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  17400 aactagttacaaacccgtgcttcgcacgggttgaat 17435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 61754 - 61720
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||||||||    
T  61754 actagttacaaacccgtgcttcgcacgggttgaat 61720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 55604 - 55567
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||||||||||||||||||||||| |||||||    
T  55604 caaactagttacaaacccgtgcttcgcacgagttgaat 55567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 151878 - 151915
Alignment:
Q  242 caaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||| |||||||||||||||||||||||||||||||||    
T  151878 caaattagttacaaacccgtgcttcgcacgggttgaat 151915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 64401 - 64437
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    |||||||||| ||||||||||||||||||||||||||    
T  64401 aaactagttataaacccgtgcttcgcacgggttgaat 64437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 11275 - 11239
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||| |||||||||||||    
T  11275 aaactagttacaaacccgtgctttgcacgggttgaat 11239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Original strand, 29638 - 29669
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggtt 275  Q
    ||||||||||||||||||||||||||||||||    
T  29638 aactagttacaaacccgtgcttcgcacgggtt 29669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 143213 - 143248
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaat 279  Q
    ||||||||||||||||||||||||||| ||||||||    
T  143213 aactagttacaaacccgtgcttcgcacaggttgaat 143248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Original strand, 25614 - 25644
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  25614 actagttacaaacccgtgcttcgcacgggtt 25644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 10906 - 10876
Alignment:
Q  245 actagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||||    
T  10906 actagttacaaacccgtgcttcgcacgggtt 10876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 12995 - 12961
Alignment:
Q  246 ctagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    ||||||||||||| |||||||||||||||||||||    
T  12995 ctagttacaaacctgtgcttcgcacgggttgaatt 12961  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 92668 - 92631
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  92668 aaactagttataaacccgtgctttgcacgggttgaatt 92631  T

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Target: scaffold0242 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 2707 - 2739
Alignment:
Q  243 aaactagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||| ||||||||    
T  2707 aaactagttacaaacccgtgcttcacacgggtt 2739  T

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Target: scaffold0231 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 10836 - 10808
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgg 272  Q
    |||||||||||||||||||||||||||||    
T  10836 aactagttacaaacccgtgcttcgcacgg 10808  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 275
Target Start/End: Complemental strand, 101680 - 101652
Alignment:
Q  247 tagttacaaacccgtgcttcgcacgggtt 275  Q
    |||||||||||||||||||||||||||||    
T  101680 tagttacaaacccgtgcttcgcacgggtt 101652  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 139617 - 139581
Alignment:
Q  244 aactagttacaaacccgtgcttcgcacgggttgaatt 280  Q
    |||||||||||||| |||| |||||||||||||||||    
T  139617 aactagttacaaactcgtgtttcgcacgggttgaatt 139581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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