View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11700_low_33 (Length: 249)
Name: NF11700_low_33
Description: NF11700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11700_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 37258825 - 37258590
Alignment:
| Q |
1 |
cccagttttcgccaaattcttctccgaactcaagaccaagaatctcctccaagaaacatccaaagcattatgtattggtgcacgtgttggacaagaagtc |
100 |
Q |
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| T |
37258825 |
cccagttttcgccaaattcttctccgaactcaagaccaagaatctcctccaagaaacatccaaagcattatgtattggtgcacgtgttggacaagaagtc |
37258726 |
T |
|
| Q |
101 |
gaagctctacgacgaatcaacgtcgttgattccatcggaatggacctcgttccacatccaccgttggtcgtggaaggtgatttccataaccaaccgtttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37258725 |
gaagctctacgacgaatcaacgtcgttgattccatcggaatggacctcgttccacatccaccgttggtcgtggaaggtgatttccataaccaaccgtttg |
37258626 |
T |
|
| Q |
201 |
gtaacgacacgttcgattttgaattctccaatgtct |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
37258625 |
gtaacgacacgttcgattttgaattctccaatgtct |
37258590 |
T |
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