View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11701_low_15 (Length: 387)

Name: NF11701_low_15
Description: NF11701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11701_low_15
NF11701_low_15
[»] chr8 (50 HSPs)
chr8 (214-360)||(35362661-35362807)
chr8 (214-362)||(32931084-32931231)
chr8 (226-362)||(35914624-35914760)
chr8 (214-318)||(44699634-44699737)
chr8 (214-366)||(29520769-29520920)
chr8 (214-330)||(490491-490606)
chr8 (214-363)||(45419357-45419506)
chr8 (214-333)||(45041327-45041444)
chr8 (234-333)||(14459048-14459146)
chr8 (241-362)||(17491692-17491813)
chr8 (224-356)||(14903690-14903822)
chr8 (214-272)||(1928598-1928656)
chr8 (214-363)||(11523734-11523883)
chr8 (224-278)||(27556323-27556377)
chr8 (214-362)||(35643619-35643765)
chr8 (214-362)||(30198277-30198425)
chr8 (236-329)||(41971823-41971915)
chr8 (302-362)||(45512593-45512654)
chr8 (214-362)||(18742034-18742181)
chr8 (214-362)||(18746998-18747145)
chr8 (281-364)||(28169513-28169596)
chr8 (227-362)||(29700399-29700534)
chr8 (216-363)||(36565254-36565401)
chr8 (214-302)||(44529408-44529496)
chr8 (215-302)||(12491150-12491237)
chr8 (214-363)||(21121268-21121416)
chr8 (236-365)||(43904698-43904827)
chr8 (227-272)||(2518422-2518467)
chr8 (225-302)||(21425229-21425306)
chr8 (214-342)||(30559837-30559969)
chr8 (214-278)||(1313771-1313835)
chr8 (214-362)||(18737149-18737296)
chr8 (214-302)||(36545332-36545420)
chr8 (214-302)||(42469738-42469826)
chr8 (214-302)||(44047543-44047631)
chr8 (214-253)||(6483527-6483566)
chr8 (223-298)||(16035747-16035822)
chr8 (214-289)||(41031431-41031506)
chr8 (214-289)||(41031537-41031612)
chr8 (214-272)||(14742093-14742151)
chr8 (214-356)||(23492164-23492305)
chr8 (214-288)||(25473414-25473488)
chr8 (214-288)||(36143538-36143612)
chr8 (214-267)||(45512455-45512508)
chr8 (311-362)||(5127377-5127429)
chr8 (226-302)||(8932886-8932962)
chr8 (214-302)||(25300282-25300370)
chr8 (214-270)||(30689950-30690006)
chr8 (226-278)||(35646953-35647005)
chr8 (214-258)||(40982907-40982951)
[»] chr2 (54 HSPs)
chr2 (214-371)||(3481267-3481425)
chr2 (214-362)||(18959034-18959182)
chr2 (216-361)||(43751960-43752105)
chr2 (214-371)||(33504337-33504495)
chr2 (214-376)||(38435061-38435223)
chr2 (216-342)||(37470146-37470271)
chr2 (214-365)||(12141664-12141815)
chr2 (214-333)||(9496019-9496137)
chr2 (214-356)||(33287550-33287692)
chr2 (214-369)||(45543084-45543238)
chr2 (214-302)||(31959704-31959792)
chr2 (241-350)||(19336931-19337041)
chr2 (214-317)||(32364932-32365034)
chr2 (262-376)||(37452285-37452399)
chr2 (214-324)||(6219127-6219236)
chr2 (214-288)||(9531611-9531685)
chr2 (214-361)||(43573141-43573287)
chr2 (214-302)||(227372-227460)
chr2 (214-278)||(3720426-3720490)
chr2 (214-272)||(11992119-11992177)
chr2 (214-272)||(21281474-21281532)
chr2 (241-362)||(26784378-26784499)
chr2 (214-279)||(451659-451724)
chr2 (223-272)||(887085-887134)
chr2 (214-279)||(12474938-12475003)
chr2 (214-287)||(12520073-12520146)
chr2 (214-287)||(19863432-19863505)
chr2 (214-287)||(19867764-19867837)
chr2 (214-287)||(19872665-19872738)
chr2 (214-302)||(3635334-3635422)
chr2 (214-302)||(3866255-3866343)
chr2 (214-302)||(7326171-7326259)
chr2 (214-302)||(12734883-12734971)
chr2 (214-278)||(17429257-17429321)
chr2 (214-302)||(25834861-25834949)
chr2 (214-302)||(28508861-28508949)
chr2 (214-278)||(30306239-30306303)
chr2 (214-278)||(34931639-34931703)
chr2 (226-329)||(45077884-45077988)
chr2 (214-333)||(12882056-12882174)
chr2 (214-277)||(38328381-38328444)
chr2 (214-363)||(2610710-2610859)
chr2 (214-272)||(4807808-4807866)
chr2 (214-272)||(17670681-17670739)
chr2 (241-362)||(26670891-26671012)
chr2 (224-270)||(32443851-32443897)
chr2 (214-288)||(39709212-39709286)
chr2 (214-267)||(10516760-10516813)
chr2 (215-272)||(13443920-13443977)
chr2 (225-302)||(36366819-36366896)
chr2 (214-270)||(440931-440987)
chr2 (214-270)||(3030894-3030949)
chr2 (214-302)||(35643131-35643219)
chr2 (214-302)||(38430067-38430155)
[»] chr3 (56 HSPs)
chr3 (214-376)||(42510027-42510189)
chr3 (214-363)||(54128500-54128650)
chr3 (214-376)||(54364987-54365148)
chr3 (214-343)||(45289102-45289230)
chr3 (214-350)||(19676092-19676228)
chr3 (233-362)||(49841741-49841868)
chr3 (214-363)||(48508357-48508506)
chr3 (214-363)||(50960648-50960797)
chr3 (215-350)||(34844585-34844720)
chr3 (214-329)||(19758044-19758157)
chr3 (214-325)||(40116349-40116459)
chr3 (255-376)||(40116520-40116641)
chr3 (214-272)||(52927859-52927917)
chr3 (242-331)||(23534609-23534697)
chr3 (226-323)||(40991594-40991690)
chr3 (214-326)||(29601052-29601163)
chr3 (214-278)||(48734158-48734222)
chr3 (214-329)||(19737141-19737254)
chr3 (218-315)||(49888361-49888454)
chr3 (214-268)||(40672378-40672432)
chr3 (214-272)||(45374488-45374546)
chr3 (214-350)||(45486860-45486999)
chr3 (249-362)||(41482183-41482298)
chr3 (214-302)||(12096716-12096804)
chr3 (214-302)||(40106631-40106719)
chr3 (214-278)||(46148235-46148299)
chr3 (214-333)||(49042089-49042208)
chr3 (214-272)||(24541343-24541401)
chr3 (214-272)||(24778620-24778678)
chr3 (214-363)||(52138922-52139071)
chr3 (216-302)||(52156097-52156183)
chr3 (214-287)||(20208196-20208269)
chr3 (214-271)||(41529975-41530032)
chr3 (214-302)||(5169015-5169103)
chr3 (214-302)||(14415271-14415358)
chr3 (226-298)||(32170592-32170664)
chr3 (233-329)||(36304123-36304218)
chr3 (214-302)||(47555343-47555431)
chr3 (214-333)||(15296060-15296178)
chr3 (223-302)||(38060897-38060976)
chr3 (246-364)||(39600724-39600842)
chr3 (214-288)||(7895891-7895965)
chr3 (226-362)||(33755367-33755501)
chr3 (214-272)||(35420482-35420539)
chr3 (214-288)||(39208805-39208879)
chr3 (218-272)||(40273220-40273274)
chr3 (216-253)||(7446277-7446314)
chr3 (216-253)||(7454419-7454456)
chr3 (214-271)||(37083303-37083360)
chr3 (214-267)||(49503579-49503632)
chr3 (214-267)||(52882673-52882726)
chr3 (214-278)||(659732-659796)
chr3 (311-362)||(31261049-31261101)
chr3 (214-278)||(49045042-49045106)
chr3 (214-302)||(51447728-51447816)
chr3 (214-302)||(53262324-53262412)
[»] chr5 (45 HSPs)
chr5 (214-366)||(79632-79784)
chr5 (221-371)||(6788181-6788331)
chr5 (215-371)||(9235163-9235316)
chr5 (214-368)||(6859498-6859652)
chr5 (260-362)||(43035104-43035206)
chr5 (218-301)||(38830504-38830586)
chr5 (238-361)||(6889117-6889240)
chr5 (214-363)||(11675651-11675801)
chr5 (214-363)||(4496506-4496655)
chr5 (214-288)||(5558338-5558412)
chr5 (227-355)||(28012-28140)
chr5 (214-328)||(418045-418158)
chr5 (214-288)||(18855804-18855878)
chr5 (214-363)||(38685089-38685238)
chr5 (214-362)||(12576871-12577019)
chr5 (214-279)||(20456979-20457044)
chr5 (214-302)||(29816565-29816653)
chr5 (241-356)||(29922413-29922528)
chr5 (214-302)||(30213758-30213846)
chr5 (214-278)||(38132543-38132607)
chr5 (216-272)||(42272690-42272746)
chr5 (214-363)||(10639424-10639573)
chr5 (214-363)||(12492395-12492544)
chr5 (217-271)||(27386554-27386608)
chr5 (214-272)||(28985296-28985354)
chr5 (214-279)||(42576216-42576281)
chr5 (217-318)||(43557847-43557947)
chr5 (214-278)||(2915507-2915571)
chr5 (214-270)||(7359272-7359328)
chr5 (214-278)||(11069173-11069237)
chr5 (214-302)||(28976870-28976958)
chr5 (223-350)||(30588582-30588709)
chr5 (214-269)||(9234102-9234157)
chr5 (226-269)||(41108752-41108795)
chr5 (214-363)||(1287590-1287739)
chr5 (214-272)||(12534425-12534483)
chr5 (214-272)||(13561397-13561455)
chr5 (214-347)||(14667909-14668042)
chr5 (214-272)||(27800041-27800099)
chr5 (223-272)||(32442145-32442194)
chr5 (217-278)||(41200360-41200421)
chr5 (214-271)||(43423506-43423563)
chr5 (214-302)||(3302027-3302115)
chr5 (214-273)||(8081974-8082034)
chr5 (282-376)||(29938224-29938314)
[»] chr6 (22 HSPs)
chr6 (214-362)||(34516-34664)
chr6 (215-371)||(8364670-8364826)
chr6 (214-350)||(31818666-31818802)
chr6 (214-364)||(9593721-9593869)
chr6 (214-376)||(12133913-12134074)
chr6 (218-363)||(5095956-5096101)
chr6 (214-363)||(30031378-30031527)
chr6 (214-288)||(12890772-12890846)
chr6 (214-302)||(9706953-9707041)
chr6 (214-278)||(21089604-21089668)
chr6 (214-302)||(34934841-34934929)
chr6 (223-333)||(655414-655523)
chr6 (242-292)||(1911573-1911623)
chr6 (214-363)||(28085498-28085647)
chr6 (214-302)||(31819014-31819102)
chr6 (214-272)||(1008063-1008120)
chr6 (236-302)||(3210541-3210607)
chr6 (214-328)||(5897615-5897728)
chr6 (223-289)||(7513010-7513076)
chr6 (214-331)||(6293403-6293519)
chr6 (214-302)||(34143776-34143864)
chr6 (214-302)||(34156392-34156480)
[»] chr7 (57 HSPs)
chr7 (215-366)||(28627945-28628096)
chr7 (214-362)||(38135224-38135372)
chr7 (243-376)||(26741934-26742069)
chr7 (214-363)||(40979939-40980088)
chr7 (215-355)||(9210716-9210856)
chr7 (219-359)||(47796168-47796308)
chr7 (225-333)||(40391845-40391952)
chr7 (214-329)||(2882747-2882861)
chr7 (214-329)||(27893574-27893688)
chr7 (215-355)||(42187572-42187711)
chr7 (214-362)||(45601599-45601747)
chr7 (214-302)||(2885733-2885821)
chr7 (214-302)||(31681031-31681119)
chr7 (214-302)||(34341406-34341494)
chr7 (214-302)||(36101788-36101876)
chr7 (214-363)||(11594082-11594231)
chr7 (215-333)||(14057631-14057748)
chr7 (215-333)||(14367659-14367776)
chr7 (214-363)||(34869542-34869691)
chr7 (214-363)||(35906212-35906361)
chr7 (214-267)||(6263477-6263530)
chr7 (214-329)||(28541954-28542069)
chr7 (214-270)||(28708596-28708652)
chr7 (214-302)||(47852270-47852358)
chr7 (214-356)||(12966145-12966287)
chr7 (215-302)||(42969881-42969968)
chr7 (214-363)||(1011169-1011317)
chr7 (233-362)||(1569139-1569268)
chr7 (214-288)||(28208339-28208413)
chr7 (214-288)||(39906383-39906457)
chr7 (216-302)||(45836495-45836581)
chr7 (214-279)||(6375074-6375139)
chr7 (241-342)||(36239834-36239934)
chr7 (246-362)||(47848797-47848912)
chr7 (214-302)||(7273283-7273371)
chr7 (214-278)||(12841286-12841350)
chr7 (214-302)||(21078100-21078188)
chr7 (214-302)||(27648963-27649051)
chr7 (214-278)||(30814136-30814200)
chr7 (214-278)||(31682613-31682677)
chr7 (216-288)||(36652189-36652261)
chr7 (214-342)||(40149024-40149150)
chr7 (214-302)||(43281857-43281945)
chr7 (214-302)||(46355867-46355955)
chr7 (214-253)||(40630666-40630705)
chr7 (214-288)||(37618142-37618216)
chr7 (241-350)||(37976370-37976479)
chr7 (214-272)||(47652760-47652818)
chr7 (223-272)||(27021745-27021794)
chr7 (214-278)||(4604754-4604818)
chr7 (214-266)||(5418293-5418345)
chr7 (214-258)||(20158682-20158726)
chr7 (302-365)||(28562464-28562528)
chr7 (313-376)||(30814780-30814844)
chr7 (214-289)||(33732030-33732103)
chr7 (214-302)||(34035165-34035253)
chr7 (225-253)||(45841018-45841046)
[»] chr1 (70 HSPs)
chr1 (214-333)||(52532627-52532745)
chr1 (214-362)||(2544721-2544864)
chr1 (214-331)||(7133313-7133429)
chr1 (214-362)||(36339815-36339962)
chr1 (214-340)||(50846708-50846833)
chr1 (214-376)||(8796318-8796480)
chr1 (214-324)||(27072498-27072607)
chr1 (223-371)||(28511821-28511969)
chr1 (214-350)||(41560364-41560500)
chr1 (216-366)||(32404539-32404689)
chr1 (214-329)||(35828573-35828687)
chr1 (218-363)||(9599409-9599554)
chr1 (214-363)||(52561600-52561749)
chr1 (220-333)||(1661572-1661684)
chr1 (214-349)||(29128919-29129055)
chr1 (214-362)||(38869005-38869153)
chr1 (223-328)||(43375618-43375722)
chr1 (214-278)||(17269000-17269064)
chr1 (214-302)||(25715337-25715425)
chr1 (222-278)||(37294127-37294183)
chr1 (214-348)||(37462887-37463020)
chr1 (214-363)||(1210867-1211016)
chr1 (224-333)||(8676883-8676994)
chr1 (214-288)||(22175342-22175416)
chr1 (214-288)||(28090705-28090779)
chr1 (214-363)||(30202141-30202290)
chr1 (214-363)||(49347404-49347553)
chr1 (214-302)||(19908046-19908134)
chr1 (214-302)||(25979242-25979330)
chr1 (214-302)||(37311766-37311854)
chr1 (214-302)||(40568421-40568509)
chr1 (214-278)||(44941787-44941851)
chr1 (214-356)||(3818867-3819009)
chr1 (220-279)||(27704156-27704215)
chr1 (224-350)||(40416506-40416632)
chr1 (243-326)||(52900682-52900764)
chr1 (214-272)||(21769722-21769780)
chr1 (214-288)||(42337753-42337827)
chr1 (215-288)||(1290043-1290116)
chr1 (214-362)||(19908395-19908543)
chr1 (214-279)||(29577458-29577523)
chr1 (214-279)||(32112000-32112065)
chr1 (214-267)||(41165500-41165553)
chr1 (214-278)||(2429640-2429704)
chr1 (223-362)||(6025728-6025867)
chr1 (215-302)||(32082768-32082856)
chr1 (214-326)||(48801625-48801734)
chr1 (214-302)||(51602239-51602327)
chr1 (214-253)||(4318856-4318895)
chr1 (214-301)||(31274412-31274499)
chr1 (214-365)||(48431410-48431568)
chr1 (214-272)||(4415562-4415620)
chr1 (234-363)||(9509440-9509569)
chr1 (214-363)||(34792360-34792509)
chr1 (214-272)||(38877354-38877412)
chr1 (214-272)||(39140728-39140786)
chr1 (214-363)||(39318251-39318399)
chr1 (310-363)||(40228112-40228166)
chr1 (214-288)||(44751681-44751755)
chr1 (214-288)||(52921277-52921351)
chr1 (214-271)||(2914134-2914191)
chr1 (311-363)||(8628152-8628205)
chr1 (215-288)||(50257767-50257840)
chr1 (214-302)||(4001466-4001554)
chr1 (214-302)||(6084158-6084246)
chr1 (214-302)||(9592917-9593005)
chr1 (214-302)||(22090279-22090367)
chr1 (214-302)||(34444539-34444627)
chr1 (214-258)||(42539223-42539267)
chr1 (214-258)||(43481809-43481853)
[»] chr4 (61 HSPs)
chr4 (214-371)||(53540404-53540561)
chr4 (266-362)||(21945701-21945797)
chr4 (214-371)||(13805276-13805433)
chr4 (215-346)||(56439583-56439714)
chr4 (214-325)||(55007907-55008017)
chr4 (214-299)||(29398990-29399075)
chr4 (214-360)||(37488216-37488362)
chr4 (214-328)||(25574982-25575095)
chr4 (218-363)||(26037520-26037665)
chr4 (214-363)||(31959825-31959974)
chr4 (214-363)||(39100547-39100696)
chr4 (214-350)||(23906308-23906444)
chr4 (214-302)||(51438628-51438716)
chr4 (226-333)||(31043225-31043331)
chr4 (214-372)||(45204851-45205008)
chr4 (214-288)||(436426-436500)
chr4 (214-363)||(1777028-1777177)
chr4 (243-333)||(30621241-30621330)
chr4 (214-363)||(35690393-35690542)
chr4 (214-363)||(48174104-48174253)
chr4 (215-363)||(4440975-4441123)
chr4 (223-363)||(53518344-53518483)
chr4 (214-290)||(12443290-12443366)
chr4 (214-302)||(52569526-52569614)
chr4 (214-333)||(13296586-13296704)
chr4 (214-329)||(31459151-31459265)
chr4 (214-277)||(36255533-36255596)
chr4 (214-332)||(26024861-26024978)
chr4 (214-272)||(51176787-51176845)
chr4 (214-267)||(15665319-15665372)
chr4 (218-362)||(49987531-49987675)
chr4 (214-302)||(5306479-5306567)
chr4 (218-270)||(15661887-15661939)
chr4 (214-302)||(19154874-19154962)
chr4 (241-301)||(20105556-20105616)
chr4 (220-272)||(28467651-28467703)
chr4 (214-302)||(32479221-32479309)
chr4 (214-278)||(45209216-45209280)
chr4 (214-326)||(55388222-55388333)
chr4 (214-297)||(1095633-1095716)
chr4 (214-285)||(19061946-19062017)
chr4 (214-362)||(2557682-2557831)
chr4 (248-330)||(20863795-20863876)
chr4 (214-272)||(27450191-27450249)
chr4 (214-264)||(30634117-30634167)
chr4 (214-363)||(39708555-39708704)
chr4 (214-288)||(48622554-48622628)
chr4 (217-302)||(34379586-34379670)
chr4 (225-302)||(50967050-50967127)
chr4 (214-258)||(7947164-7947208)
chr4 (214-302)||(12494846-12494934)
chr4 (239-350)||(21107127-21107238)
chr4 (215-271)||(21359237-21359293)
chr4 (214-302)||(21528471-21528559)
chr4 (214-266)||(26275027-26275079)
chr4 (214-270)||(34585697-34585753)
chr4 (314-362)||(38903828-38903876)
chr4 (214-266)||(46715278-46715330)
chr4 (214-278)||(49738561-49738625)
chr4 (216-272)||(49939747-49939803)
chr4 (214-258)||(50862858-50862902)
[»] scaffold0010 (1 HSPs)
scaffold0010 (214-333)||(160335-160453)
[»] scaffold0050 (2 HSPs)
scaffold0050 (215-362)||(58238-58385)
scaffold0050 (236-348)||(45477-45588)
[»] scaffold0570 (1 HSPs)
scaffold0570 (214-363)||(959-1108)
[»] scaffold0392 (1 HSPs)
scaffold0392 (214-289)||(6783-6858)
[»] scaffold1318 (1 HSPs)
scaffold1318 (214-302)||(514-602)
[»] scaffold0491 (1 HSPs)
scaffold0491 (214-362)||(3839-3986)
[»] scaffold0168 (1 HSPs)
scaffold0168 (214-288)||(28900-28974)
[»] scaffold0245 (1 HSPs)
scaffold0245 (215-288)||(16448-16521)
[»] scaffold0024 (1 HSPs)
scaffold0024 (227-288)||(48140-48201)
[»] scaffold0018 (1 HSPs)
scaffold0018 (281-330)||(43540-43588)
[»] scaffold0157 (1 HSPs)
scaffold0157 (214-302)||(25543-25631)


Alignment Details
Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 35362661 - 35362807
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||||||||||| ||||||  ||| ||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||    
T  35362661 caagccttttcccactaagtggggttggctgcatggatcaaattacgccataatgttctatcatacaccatatttcagtccaactca-ttaatttccaaa 35362759  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcct 360  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  35362760 tctttcctaatagtttctccgatagtttttctaggtcttcctctgcct 35362807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 214 - 362
Target Start/End: Complemental strand, 32931231 - 32931084
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||| |||||||| |||    
T  32931231 caaggcttttcccactaagtggggtcggctacatggatcaaattatgccataatgttctatcatacaccatatttc-gtccaactca-ttaatttcaaaa 32931134  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  32931133 tctttcctaatagtttctctgatagtttttttaggtcttcctctgcctct 32931084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 226 - 362
Target Start/End: Original strand, 35914624 - 35914760
Alignment:
Q  226 cactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaata 325  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||| |||||  ||||||||  |||||||||| ||||| | ||| ||||||||||||    
T  35914624 cactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatattttggtccaactca-ttaatcttcaagtctttcctaata 35914722  T
Q  326 gtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||||| ||| |||||||| |||| |||||| ||||    
T  35914723 gtttctcttatagtttttctatgtcttcctctgtctct 35914760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 44699737 - 44699634
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||||||||||| ||||||| |||||| |||||| |||| |||||| |||||| |||| | ||||||||| ||| |||||| ||||||||||||    
T  44699737 caagccttttcccactaagtggggtctgctacagggatcaaattacgccatagtgttctatcatgcaccatatttcggtctaactca-ttaatttccaaa 44699639  T
Q  314 tcttt 318  Q
    |||||    
T  44699638 tcttt 44699634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 366
Target Start/End: Complemental strand, 29520920 - 29520769
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| || ||||||||| ||||||  ||||||||||||| |||| ||||||||||||| |||||  ||||||||   ||||||||| ||||| || |||    
T  29520920 caagcattatcccactaaatggggtgggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactca-ttaatctctaaa 29520822  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtg 366  Q
    || ||||||| ||||||||| ||| |||||||||| || ||||| |||||||||    
T  29520821 tcgttcctaacagtttctcttatagtttttctagg-cttcctctacctcttgtg 29520769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 330
Target Start/End: Complemental strand, 490606 - 490491
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| ||||||||||||| |||||  ||||||||   ||||||||| | ||| || |||    
T  490606 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactca-tcaatctctaaa 490508  T
Q  314 tctttcctaatagtttc 330  Q
    |||||||| ||||||||    
T  490507 tctttccttatagtttc 490491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 45419506 - 45419357
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt-taatttccaa 312  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||  |||||||||||| |||||  ||| ||||   || |||||||| | ||||  ||    
T  45419506 caagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctatcataaaccaaatttggatcaaactcattatgattt--aa 45419409  T
Q  313 atctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    | ||||||||||||||||||| ||| ||||||||||||| ||||| ||||||    
T  45419408 acctttcctaatagtttctcttatagtttttctaggtcttcctctacctctt 45419357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 45041327 - 45041444
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||| |||||||||  || |||||  |||||||  | ||||||||| ||||  || |||    
T  45041327 caagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgcgctatcataaaccatattgga-tccaactca-ttaacctctaaa 45041424  T
Q  314 tctttcctaatagtttctct 333  Q
    ||||||||||||||||||||    
T  45041425 tctttcctaatagtttctct 45041444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 333
Target Start/End: Complemental strand, 14459146 - 14459048
Alignment:
Q  234 ggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctct 333  Q
    |||||| ||||||||||||| ||||  |||||||||||  |||||  ||||||||  ||| |||||||| ||| ||||||||||||||||||||||||||    
T  14459146 ggggtcggctacatggatcaaattacaccataatgttccatcataaaccatattttggtctaactcatt-aatctccaaatctttcctaatagtttctct 14459048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 362
Target Start/End: Original strand, 17491692 - 17491813
Alignment:
Q  241 gctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tt 339  Q
    |||||||||||||   || ||||||||||||| |||||  ||||||||  |||||||||| ||||| ||||| |||||| ||||||||||||| | | ||    
T  17491692 gctacatggatcaacatacgccataatgttctatcataaaccatattttggtccaactca-ttaatctccaagtctttcttaatagtttctcttacagtt 17491790  T
Q  340 tttctaggtctgcctctgcctct 362  Q
    ||||||||||| ||| |||||||    
T  17491791 tttctaggtcttcctgtgcctct 17491813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 224 - 356
Target Start/End: Complemental strand, 14903822 - 14903690
Alignment:
Q  224 cccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaa 323  Q
    |||||||| |||||| |||||||||||||| |||| |||||||||| || |||||  || |||||  ||| |||||| ||| |||| |||| ||||| ||    
T  14903822 cccactaagtggggtaagctacatggatcaaattacgccataatgtcctatcataaaccttattttggtctaactca-ttactttctaaatatttcccaa 14903724  T
Q  324 tagtttctctgata-tttttctaggtctgcctct 356  Q
    |||| ||||| ||| ||||||||||||| |||||    
T  14903723 tagtctctcttatagtttttctaggtcttcctct 14903690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 1928598 - 1928656
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||||||||||||    
T  1928598 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttct 1928656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 11523734 - 11523883
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  11523734 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 11523832  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  11523833 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 11523883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 27556323 - 27556377
Alignment:
Q  224 cccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||| |||||    
T  27556323 cccactaagtggggtcggctacatggatcaaattatgccataatgttctatcata 27556377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 35643619 - 35643765
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| || ||||||||| ||||||  ||||||||||||| | |||| ||   |||||| |||||  |||||||||  ||||||||||| ||| || | |    
T  35643619 caagcattatcccactaagtggggtaggctacatggatcaaaatatggcag--tgttctatcataaaccatatttcgatccaactcatt-aatctctaga 35643715  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||| ||||| ||||||| ||| ||||||||||||| |||||||||||    
T  35643716 tctttcttaataatttctcttatagtttttctaggtcttcctctgcctct 35643765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 30198277 - 30198425
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| || |||| ||||| | ||  ||||||| |||| |||||  ||||||| |  ||||||||| ||||| || | |    
T  30198277 caagccttatcccactaagtggggtcggcaacatagatcaaactacaccataatattctatcataaaccatattccgatccaactca-ttaatctcaata 30198375  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||| ||||| ||||||| ||| |||||||| |||| |||||||||||    
T  30198376 tctttcttaataatttctcttatagtttttctaagtctacctctgcctct 30198425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 41971823 - 41971915
Alignment:
Q  236 ggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagttt 329  Q
    ||||||||||||| || |||||| | ||||||||||| |||||  | |||||||||||||||||| ||||| || ||||||||| || ||||||    
T  41971823 ggtcagctacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactca-ttaatctctaaatctttcttagtagttt 41971915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 45512593 - 45512654
Alignment:
Q  302 ttaatttccaaatctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    ||||| ||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  45512593 ttaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctctgcctct 45512654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 18742034 - 18742181
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||| | |||||||||||||||||  |||||| ||||| |||| ||| ||||||||  |||||  |||||||| | ||||||||| ||||| |    |    
T  18742034 caagccatatcccactaattggggtcgactacattgatcaaattaagccttaatgttcaatcataaaccatattttaatccaactca-ttaatctaatga 18742132  T
Q  314 tctttcctaatagtttctctgatatttttctaggtctgcctctgcctct 362  Q
    | ||||  |||||||||||| ||| |||| ||||||| |||||||||||    
T  18742133 tttttctaaatagtttctcttatagttttttaggtctacctctgcctct 18742181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 18746998 - 18747145
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||| | |||||||||||||||||  |||||| ||||| |||| ||| ||||||||  |||||  |||||||| | ||||||||| ||||| |    |    
T  18746998 caagccatatcccactaattggggtcgactacattgatcaaattaagccttaatgttcaatcataaaccatattttaatccaactca-ttaatctaatga 18747096  T
Q  314 tctttcctaatagtttctctgatatttttctaggtctgcctctgcctct 362  Q
    | ||||  |||||||||||| ||| |||| ||||||| |||||||||||    
T  18747097 tttttctaaatagtttctcttatagttttttaggtctacctctgcctct 18747145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 364
Target Start/End: Complemental strand, 28169596 - 28169513
Alignment:
Q  281 ccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttg 364  Q
    |||||||| | ||||||||||| ||| || ||||||||||||||||||||||| ||| ||||| ||||||| ||||| |||||||    
T  28169596 ccatatttgaatccaactcatt-aatctcaaaatctttcctaatagtttctcttatagtttttttaggtcttcctctacctcttg 28169513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 29700534 - 29700399
Alignment:
Q  227 actaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatag 326  Q
    ||||| ||| ||| ||||||||||||| ||||  |||||||||||| |||||  | | ||||  |||| |||||||| || ||||| ||||||||| |||    
T  29700534 actaagtggagtcggctacatggatcaaattacaccataatgttctatcataaacaaaattttggtccgactcattt-atctccaagtctttcctattag 29700436  T
Q  327 tttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||||  || ||||||||||||| ||||| |||||    
T  29700435 tttctcttttagtttttctaggtcttcctctacctct 29700399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 36565254 - 36565401
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatc 315  Q
    |||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||||    
T  36565254 agccttatcccactaagtggggtcggctacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaatc 36565352  T
Q  316 tttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
     || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  36565353 ctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 36565401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 44529496 - 44529408
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || |||||||| |||||| |||||  ||| ||||   |||||||||||    
T  44529496 caagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcataaaccaaatttggatccaactcatt 44529408  T

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Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 302
Target Start/End: Original strand, 12491150 - 12491237
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    ||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  12491150 aagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 12491237  T

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Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 21121416 - 21121268
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||||||||||| ||||||| ||||||| ||||| |||| |||||| |||||| |||||  |||||||    ||||||||| || | ||| |||    
T  21121416 caagccttttcccactaagtggggtcggctacat-gatcaaattacgccatagtgttctatcataaaccatattaggatccaactca-ttgacttctaaa 21121319  T
Q  314 tctttcctaatagtttctctgatatttttc-taggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| |||  |||| ||||||| ||||| ||||||    
T  21121318 tcctttctaatggtttctctaatagatttcttaggtctccctctacctctt 21121268  T

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Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 365
Target Start/End: Original strand, 43904698 - 43904827
Alignment:
Q  236 ggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctga 335  Q
    |||| ||||||||||||| |||| ||||||||||||| |||||  ||||||||   ||||||||| ||||| || |||||| || |||  |||||||| |    
T  43904698 ggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttagatccaactca-ttaatctctaaatctctcataaccgtttctctta 43904796  T
Q  336 ta-tttttctaggtctgcctctgcctcttgt 365  Q
    || | ||||||||||| ||| | ||||||||    
T  43904797 tagtatttctaggtcttcctgtacctcttgt 43904827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 2518422 - 2518467
Alignment:
Q  227 actaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||    
T  2518422 actaagtggggtcagctacaaggatcaaattatgccataatgttct 2518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 21425306 - 21425229
Alignment:
Q  225 ccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    ||||||| | ||||| ||||||||||||| |||||||||||||| ||| |||||   ||||||||  |||||||||||    
T  21425306 ccactaagtagggtctgctacatggatcaaattatgccataatggtctatcataaatcatatttcgatccaactcatt 21425229  T

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Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 30559969 - 30559837
Alignment:
Q  214 caagccttttcccactaattggggtcagctacat-----ggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaattt 308  Q
    |||||||| ||||||||| ||||||| |||||||     |||||| |||| | ||||||||||| |||||  |||||| |   ||||||||||| ||| |    
T  30559969 caagccttatcccactaactggggtcggctacattacatggatcaaattacgtcataatgttctatcataaaccatatatggatccaactcatt-aatct 30559871  T
Q  309 ccaaatctttcctaatagtttctctgatattttt 342  Q
    | ||||||||||| ||||||||||| ||| ||||    
T  30559870 ctaaatctttcctgatagtttctcttatagtttt 30559837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 1313835 - 1313771
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    ||||| || ||||||||| |||||||| |||||||||| | |||| ||||||||||||| |||||    
T  1313835 caagcattatcccactaagtggggtcaactacatggataaaattacgccataatgttctatcata 1313771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 18737149 - 18737296
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||| | ||||||||||||||| |  |||||| ||||| |||| ||| ||||||||  |||||  |||||||| | ||||||||| ||||| |    |    
T  18737149 caagccatatcccactaattggggccgactacattgatcaaattaagccttaatgttcgatcataaaccatattttaatccaactca-ttaatctaatga 18737247  T
Q  314 tctttcctaatagtttctctgatatttttctaggtctgcctctgcctct 362  Q
    | ||||  |||||||||||| ||| |||| ||||||| |||||||||||    
T  18737248 tttttctaaatagtttctcttatagttttttaggtctacctctgcctct 18737296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 36545420 - 36545332
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | | |||| |||||| |||||| ||| ||||   |||||||||||    
T  36545420 caagccttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcatt 36545332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 42469738 - 42469826
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||| ||| ||||||||||||||||||||| || | |||||| |||||| ||| |  ||||||||   |||||||||||    
T  42469738 caagccttatcccaataagtggggtcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 42469826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 44047543 - 44047631
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||||||||||||||||| || | |||||  |||||| |||||  ||| ||||   |||||||||||    
T  44047543 caagccttatcccactaagtggggtcagctacatggatcaaatgacgccatggtgttctatcataaaccaaatttggatccaactcatt 44047631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 6483566 - 6483527
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatca 253  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  6483566 caagccttttcccactaagtagggtcagctacatggatca 6483527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 298
Target Start/End: Original strand, 16035747 - 16035822
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaact 298  Q
    ||||||||| |||||||||||||||| |||| |||| | |||||||||||  ||||  |||||||||  |||||||    
T  16035747 tcccactaagtggggtcagctacatgaatcaaattacgtcataatgttctaccataaaccatatttcgatccaact 16035822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 41031431 - 41031506
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttc 289  Q
    |||||||| ||||||||| ||||||| |||| |||||||| |||||  ||||||||||| | |||  |||||||||    
T  41031431 caagccttatcccactaagtggggtcggctatatggatcaaattatctcataatgttctgtgataaaccatatttc 41031506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 41031537 - 41031612
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttc 289  Q
    |||||||| ||||||||| ||||||| |||| |||||||| |||||  ||||||||||| | |||  |||||||||    
T  41031537 caagccttatcccactaagtggggtcggctatatggatcaaattatctcataatgttctgtgataaaccatatttc 41031612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 14742093 - 14742151
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| ||||||    
T  14742093 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttct 14742151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 356
Target Start/End: Complemental strand, 23492305 - 23492164
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| || |||||| ||||||| ||||||||||| | || |  ||||| |||||| |||||   ||||||||  ||||||||| |||||  | | |    
T  23492305 caagccttatctcactaagtggggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactca-ttaatcgctaca 23492207  T
Q  314 tctttcctaatagtttctctgatatttttctaggtctgcctct 356  Q
    ||||||  | |||||||||| ||| |||||||||||| |||||    
T  23492206 tctttctgagtagtttctctaatagttttctaggtcttcctct 23492164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 25473414 - 25473488
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | || ||| |||||| |||||| ||| ||||    
T  25473414 caagccttatcccactaagtggggtcggctacatggatcaaatgacgctatagtgttctatcatacaccaaattt 25473488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 36143612 - 36143538
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||||||| ||||  ||||||| ||||||||||||| || | | ||||||||||| |||||  ||||||||    
T  36143612 caagccttttccgactaggtggggtcggctacatggatcagatgacgtcataatgttctatcataaaccatattt 36143538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 45512455 - 45512508
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataat 267  Q
    |||||||  ||||||||| ||||||  ||||||||||||| |||||||||||||    
T  45512455 caagcctcatcccactaagtggggtaggctacatggatcaaattatgccataat 45512508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 5127377 - 5127429
Alignment:
Q  311 aaatctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    ||||||||| ||||||||||||| ||| |||||||||| || |||||||||||    
T  5127377 aaatctttcttaatagtttctcttatagtttttctaggcctacctctgcctct 5127429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 302
Target Start/End: Complemental strand, 8932962 - 8932886
Alignment:
Q  226 cactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||| ||||||||||||||||||||| || | |||||| |||| | ||| | |||||||||   |||||||||||    
T  8932962 cactaagtggggtcagctacatggatcaaatgacgccatagtgttttatcaaaagccatattttgatccaactcatt 8932886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 25300370 - 25300282
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| | ||||||  ||||||||||||||| ||||| |||||| |||| |||| | |||||  ||||||||   |||||||||||    
T  25300370 caagccttgttccactaggtggggtcagctacatagatcaaattatgtcatagtgttatatcataaaccatatttggatccaactcatt 25300282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 30690006 - 30689950
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgtt 270  Q
    ||||| || ||||||||| ||||||| ||||||||||||| |||| | |||||||||    
T  30690006 caagcattatcccactaagtggggtcggctacatggatcaaattacgtcataatgtt 30689950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 35646953 - 35647005
Alignment:
Q  226 cactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||| ||||||| ||| ||||||||| |||| ||||||||||||| |||||    
T  35646953 cactaagtggggtcggctgcatggatcaaattacgccataatgttctatcata 35647005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 40982907 - 40982951
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatatta 258  Q
    |||||||||||||||||| ||||||| || |||||||||| ||||    
T  40982907 caagccttttcccactaaatggggtcggcaacatggatcaaatta 40982951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 214 - 371
Target Start/End: Complemental strand, 3481425 - 3481267
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||||| |||||  ||||||||| ||||||||   ||||||||||||    
T  3481425 caagccttttccaactaagtggggtcagctacatggatcaaattacgccataatgttctatcatagaccatatttctgtccaact-tgttaatttccaaa 3481327  T
Q  314 tctttcctaatagtttctctga--tatttttctaggtctgcctctgcctcttgtggtctg 371  Q
    ||||||||||||||||||||||  | ||||||||||||| ||||| ||||| ||| ||||    
T  3481326 tctttcctaatagtttctctgatttttttttctaggtcttcctcttcctctagtgatctg 3481267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 214 - 362
Target Start/End: Complemental strand, 18959182 - 18959034
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||   ||||||||| ||||| |||||     
T  18959182 caagccttatcccactaagtggggtcagctacatggatcaaattatgccataatgttctatcatagaccatattttgatccaactca-ttaatctccaag 18959084  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||||| |||||||||||  || ||||||||||||| |||||||||||    
T  18959083 tctttccttatagtttctcttgtagtttttctaggtcttcctctgcctct 18959034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 361
Target Start/End: Original strand, 43751960 - 43752105
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatc 315  Q
    |||||||||| ||||| || |||| || |||||||||| ||||   |||| |||||| |||||| |||| |||| |||||||||||| ||||||||||||    
T  43751960 agccttttccaactaagtgaggtcggccacatggatcaaattacaacatagtgttctatcatacaccatctttcggtccaactcatt-aatttccaaatc 43752058  T
Q  316 tttcctaatagtttctctgata-tttttctaggtctgcctctgcctc 361  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  43752059 tttcctaatagtttctctgatagtttttctaggtcttcctatgcctc 43752105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 371
Target Start/End: Complemental strand, 33504495 - 33504337
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| |||| |||||||| |||| ||||||||||||| |||||  |||||||||| ||||||| ||| ||| || | |    
T  33504495 caagccttatcccactaagtggggtcggctagatggatcaaattacgccataatgttctatcatataccatatttcaatccaacttattaaatctctaga 33504396  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctg 371  Q
    |||||| ||||||||||||| ||| ||||||||||| |  |||||||||| ||| ||||    
T  33504395 tctttcttaatagtttctcttatagtttttctaggtttttctctgcctctagtgatctg 33504337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 376
Target Start/End: Complemental strand, 38435223 - 38435061
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| | ||||||| |||| || ||||||||||||| |||| ||||||||||||  |||||  ||| |||||  |||||| || ||||| || | |    
T  38435223 caagccttatgccactaagtgggatcggctacatggatcaaattacgccataatgttcaatcataaaccaaatttcgatccaacaca-ttaatctctaga 38435125  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctgcctat 376  Q
    |||||| |||||||||||||  || ||||||||||||| ||||||||||| ||| |||| ||||    
T  38435124 tctttcttaatagtttctcttgtagtttttctaggtctacctctgcctctagtgatctgactat 38435061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 37470146 - 37470271
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatc 315  Q
    |||||| ||||||||| |||| | |||||||||||||| | ||  |||||||||||| ||||| ||||||||||  ||||||||| ||||| || | |||    
T  37470146 agccttatcccactaagtgggattagctacatggatcaaactacaccataatgttctatcatatgccatatttcgatccaactca-ttaatctctagatc 37470244  T
Q  316 tttcctaatagtttctctgatattttt 342  Q
    | |||||||||||||||| ||| ||||    
T  37470245 tgtcctaatagtttctcttatagtttt 37470271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 365
Target Start/End: Complemental strand, 12141815 - 12141664
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||||||  |||||||| ||||||  ||||||| ||||| || ||||||||||||||| |||||  ||||||||   ||||| ||| ||||| || ||     
T  12141815 caagccttaccccactaaatggggttggctacatcgatcaaatcatgccataatgttctatcatataccatatttggatccaagtca-ttaatctctaag 12141717  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgt 365  Q
    |||||||||||||||||||  |||  |||||||||||| ||||| ||||||||    
T  12141716 tctttcctaatagtttctcctatagcttttctaggtcttcctctacctcttgt 12141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 9496137 - 9496019
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||  ||||||||||||| |||| ||||||||||||| |||||  ||||||||   ||||||||| ||||  || |||    
T  9496137 caagccttgtcccactaagtggggttggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactca-ttaacctctaaa 9496039  T
Q  314 tctttcctaatagtttctct 333  Q
    ||||||  ||||||||||||    
T  9496038 tctttctgaatagtttctct 9496019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 356
Target Start/End: Complemental strand, 33287692 - 33287550
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||| ||| ||||||||| ||| ||  |||||| |||||| | |||| ||||||||||| |||||  |||||||||  || |||||| |||||||| | |    
T  33287692 caagtcttgtcccactaagtggagttggctacaaggatcaaactatgtcataatgttctatcataaaccatatttcgatctaactca-ttaatttctaga 33287594  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctct 356  Q
    |||||| ||||||||||||| ||| ||||||||||||| |||||    
T  33287593 tctttcttaatagtttctcttatagtttttctaggtcttcctct 33287550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 369
Target Start/End: Original strand, 45543084 - 45543238
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| || ||||||||| ||||||| ||||||| ||||| | || ||||||||||||| |||||  ||||||||   || ||||||||  |  || |||    
T  45543084 caagcattatcccactaagtggggtcggctacatagatcaaagtacgccataatgttctatcataaaccatatttggatcgaactcatt--acctctaaa 45543181  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtc 369  Q
    ||||| |||||||||||||| ||| |||||| |||||| ||||| |||||| |||||    
T  45543182 tcttttctaatagtttctcttatagtttttccaggtcttcctctacctcttttggtc 45543238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 31959792 - 31959704
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||| ||||| ||||||| ||||||||||||| ||||||||||| |||||| |||||  ||||||||   |||||||||||    
T  31959792 caagccttatcctactaagtggggtctgctacatggatcaaattatgccatagtgttctatcataaaccatatttggatccaactcatt 31959704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 19336931 - 19337041
Alignment:
Q  241 gctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttct-ctgata-t 338  Q
    ||||||||||||| |||| ||||||||||||| |||||  |||||||||  ||||||||| ||||| || ||||||||| | |||||||||  ||||| |    
T  19336931 gctacatggatcaaattacgccataatgttctatcataaaccatatttcgatccaactca-ttaatctctaaatctttctttatagtttctagtgatagt 19337029  T
Q  339 ttttctaggtct 350  Q
    ||||||||||||    
T  19337030 ttttctaggtct 19337041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 317
Target Start/End: Original strand, 32364932 - 32365034
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||||| | ||| || |||||||||||| ||||| ||||  |||||||||||| |||||| | ||| | | |||||||||| ||||||||||||    
T  32364932 caagccttttcctattaagtgaggtcagctacattgatcaaattacaccataatgttctatcatacacaatagtccggtccaactca-ttaatttccaaa 32365030  T
Q  314 tctt 317  Q
    ||||    
T  32365031 tctt 32365034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 37452285 - 37452399
Alignment:
Q  262 cataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgat-atttttctaggtctgcctctgcct 360  Q
    ||||||||||| |||||  ||||||||| |||||||||| ||||| || || |||||| |||||| | |||| || |||||||||||||| ||||| |||    
T  37452285 cataatgttctatcataaaccatatttctgtccaactca-ttaatctctaattctttcttaatagctcctcttataatttttctaggtcttcctcttcct 37452383  T
Q  361 cttgtggtctgcctat 376  Q
    |||||| |||| ||||    
T  37452384 cttgtgatctgactat 37452399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 324
Target Start/End: Complemental strand, 6219236 - 6219127
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||| ||||  ||||||  ||||||||||||| ||||  |||||||||||| |||||  ||||||||| ||||||||||  |||| || |||    
T  6219236 caagccttatccaactaggtggggttggctacatggatcaaattacaccataatgttctatcataaaccatatttcggtccaactca-ctaatctctaaa 6219138  T
Q  314 tctttcctaat 324  Q
    |||||||||||    
T  6219137 tctttcctaat 6219127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 9531611 - 9531685
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| ||||||||||||  |||||  ||||||||    
T  9531611 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttccatcataaaccatattt 9531685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 361
Target Start/End: Original strand, 43573141 - 43573287
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| ||||||| ||||  |||||   |||||||   ||||||||||| |  ||  |||    
T  43573141 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataacgttcgatcataaatcatatttggatccaactcattaacctt--aaa 43573238  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctc 361  Q
    ||||||||| | |||| ||| ||| ||||||||||||| ||||| ||||    
T  43573239 tctttcctagttgtttttcttatagtttttctaggtcttcctctacctc 43573287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 227460 - 227372
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  227460 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 227372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 3720426 - 3720490
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||  |||||||||||| |||||    
T  3720426 caagccttctcccactaagtggggtcggctacatggatcaaattacaccataatgttctatcata 3720490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 11992119 - 11992177
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| | ||||||| ||||||||||||||||||||| || | |||||||||||||    
T  11992119 caagccttattccactaagtggggtcagctacatggatcaaataacgccataatgttct 11992177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 21281474 - 21281532
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||||||||||  ||| ||||||||| |||| |||||||||||||    
T  21281474 caagccttatcccactaattggggttggctgcatggatcaaattaagccataatgttct 21281532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 362
Target Start/End: Original strand, 26784378 - 26784499
Alignment:
Q  241 gctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tt 339  Q
    ||||||||||||| ||||  ||| |||||| | |||||  |||||||||  | ||||||| ||||| || | ||||||| ||||||||||||| ||| ||    
T  26784378 gctacatggatcaaattaaaccaaaatgttttatcatataccatatttctattcaactca-ttaatctctatatctttcttaatagtttctcttatagtt 26784476  T
Q  340 tttctaggtctgcctctgcctct 362  Q
    |||||||||||  ||||||||||    
T  26784477 tttctaggtctttctctgcctct 26784499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 451659 - 451724
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatac 279  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||||||    
T  451659 caagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatac 451724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 887085 - 887134
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||| || ||||||||||||||||||||| |||| |||||||||||||    
T  887085 tcccaccaagtggggtcagctacatggatcaaattacgccataatgttct 887134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 12474938 - 12475003
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatac 279  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||||||    
T  12474938 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatac 12475003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 12520073 - 12520146
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatt 287  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||||| |||| | |||||  |||||||    
T  12520073 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttttatcataaaccatatt 12520146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 19863505 - 19863432
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatt 287  Q
    ||||| || ||||||||| ||||| | ||||||||||||| || ||||||||||||||| |||||  |||||||    
T  19863505 caagctttatcccactaagtggggacggctacatggatcaaatcatgccataatgttctatcataaaccatatt 19863432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 19867837 - 19867764
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatt 287  Q
    ||||| || ||||||||| ||||| | ||||||||||||| || ||||||||||||||| |||||  |||||||    
T  19867837 caagctttatcccactaagtggggacggctacatggatcaaatcatgccataatgttctatcataaaccatatt 19867764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 19872738 - 19872665
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatt 287  Q
    ||||| || ||||||||| ||||| | ||||||||||||| || ||||||||||||||| |||||  |||||||    
T  19872738 caagctttatcccactaagtggggacggctacatggatcaaatcatgccataatgttctatcataaaccatatt 19872665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 3635334 - 3635422
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||| |  ||||||||   |||||||||||    
T  3635334 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 3635422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 3866343 - 3866255
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||| ||||| ||||||| ||||||||||||| || ||| |||| |||||| |||||| ||| ||||   |||||||||||    
T  3866343 caagccttatcctactaagtggggtcggctacatggatcaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcatt 3866255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 7326171 - 7326259
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||  ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  7326171 caagccttatcccactaagtggggttggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 7326259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 12734971 - 12734883
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| |||||||  |||||||||||| ||||  ||||| |||||| |||||  ||||||||   |||||||||||    
T  12734971 caagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaactcatt 12734883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 17429321 - 17429257
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| || |||||| ||||||| |||||||| |||| |||||| ||||||||||| |||||    
T  17429321 caagccttatctcactaagtggggtcggctacatgaatcaaattatgtcataatgttctatcata 17429257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 25834949 - 25834861
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||| | |||||| |||||  ||||||||   |||||||||||    
T  25834949 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactcatt 25834861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 28508949 - 28508861
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||  ||| ||||   |||||||||||    
T  28508949 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcatt 28508861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 30306303 - 30306239
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||    
T  30306303 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 30306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 34931703 - 34931639
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| |  |||| |||| |||||||| |||||||||||||||||| |||||    
T  34931703 caagccttgtcccactaagtacggtcggctatatggatcaaattatgccataatgttctatcata 34931639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 329
Target Start/End: Complemental strand, 45077988 - 45077884
Alignment:
Q  226 cactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactc-atttaatttccaaatctttcctaat 324  Q
    |||||| ||||||| | ||||||||||| |||||||||| ||||||| |||||  | |||||||  ||||||||   ||||| || ||||||||| ||||    
T  45077988 cactaagtggggtcggttacatggatcaaattatgccattatgttctatcataaactatatttcgatccaactctcattaatctctaaatctttcttaat 45077889  T
Q  325 agttt 329  Q
    |||||    
T  45077888 agttt 45077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 12882056 - 12882174
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| || |||  ||||||||||||| |||| |||| |||||||| ||| |  ||||||||   ||||||||| ||||  || |||    
T  12882056 caagccttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactca-ttaacctctaaa 12882154  T
Q  314 tctttcctaatagtttctct 333  Q
    | ||||||| ||||||||||    
T  12882155 tatttcctagtagtttctct 12882174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 38328381 - 38328444
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcat 277  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||||    
T  38328381 caagccttatcccactaagtggggtcggctacatggatcaaatgaagccatagtgttctatcat 38328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 2610859 - 2610710
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| || |||||| ||||||| | ||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  2610859 caagccttatctcactaagtggggtcggttacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 2610761  T
Q  314 tctttcctaatagtttctctgatatttttc-taggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| ||||| ||||||| ||||| ||||||    
T  2610760 tcctttctaatggtttctctaatagttttcataggtcttcctctacctctt 2610710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 4807866 - 4807808
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| ||||||    
T  4807866 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttct 4807808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 17670739 - 17670681
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| ||||||    
T  17670739 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttct 17670681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 362
Target Start/End: Complemental strand, 26671012 - 26670891
Alignment:
Q  241 gctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tt 339  Q
    ||||||||||||| ||||  |||| || |||| |||||   |||||||  |||||||||||| ||| || ||||||||| ||||||||||| | ||| ||    
T  26671012 gctacatggatcaaattacaccattatattctatcataaatcatattttggtccaactcatt-aatctctaaatctttcttaatagtttcttttatagtt 26670914  T
Q  340 tttctaggtctgcctctgcctct 362  Q
    ||| ||||||| ||||| |||||    
T  26670913 tttgtaggtcttcctctacctct 26670891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 32443897 - 32443851
Alignment:
Q  224 cccactaattggggtcagctacatggatcatattatgccataatgtt 270  Q
    |||||||| ||| ||| ||||||||||||| ||||||||||||||||    
T  32443897 cccactaagtggagtcggctacatggatcaaattatgccataatgtt 32443851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 39709212 - 39709286
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||| | ||||||||| ||||||| ||||||||||||| |||| |||||| |||||  |||||  ||||||||    
T  39709212 caagccatatcccactaagtggggtcggctacatggatcaaattacgccatagtgttcaatcataaaccatattt 39709286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 10516760 - 10516813
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataat 267  Q
    |||||||| ||||||||| || | |||||||||||||||| |||| ||||||||    
T  10516760 caagccttatcccactaagtgagatcagctacatggatcaaattacgccataat 10516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 13443920 - 13443977
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    ||||||| ||||||||| ||||||| ||||||| ||||| || | |||||||||||||    
T  13443920 aagccttatcccactaaatggggtcggctacatcgatcaaatgacgccataatgttct 13443977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 36366896 - 36366819
Alignment:
Q  225 ccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    ||||||| ||||||  | ||||||||||| ||||  |||||||||||| | |||  ||||||||| ||||||||||||    
T  36366896 ccactaaatggggttggatacatggatcaaattacaccataatgttctattataaaccatatttcggtccaactcatt 36366819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 440987 - 440931
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgtt 270  Q
    |||| ||| |||| |||| ||| ||||||||||||||||| |||| |||||||||||    
T  440987 caagtcttatccctctaagtggagtcagctacatggatcaaattacgccataatgtt 440931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 3030949 - 3030894
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgtt 270  Q
    |||| ||| ||||||||| ||||||| ||||||||||| | ||||||||||||||||    
T  3030949 caaggcttatcccactaagtggggtc-gctacatggataaaattatgccataatgtt 3030894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 35643219 - 35643131
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| |||||||| || | || ||| |||| |||||| |||||| ||| ||||   |||||||||||    
T  35643219 caagccttatcccactaagtggggtcggctacatgtattaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcatt 35643131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 38430155 - 38430067
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| || |||||| ||||||| ||||||||||||| || | |||||| |||||| ||| |  ||||||||   |||||||||||    
T  38430155 caagccttatctcactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 38430067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 214 - 376
Target Start/End: Original strand, 42510027 - 42510189
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||||||||||| |||| ||||||| ||||||||||||| |||| ||||||||||||  |||||  ||||||||  ||||||||||||| |||||||||    
T  42510027 caagccttttccctctaagtggggtcggctacatggatcaaattacgccataatgttcaatcataaaccatattttggtccaactcattt-atttccaaa 42510125  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctgcctat 376  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||||||| ||| |||| ||||    
T  42510126 tctttcctaatggtttctctgatagtttttctaggtcttcctttgcctctagtgatctgactat 42510189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 54128650 - 54128500
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| |||||||  |||||||||||| |||||||||||||||||| |||||  ||||||||  |||||||||||| |  | | |||    
T  54128650 caagccttatcccactaagtggggtcgcctacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaactcattgacct-ctaaa 54128552  T
Q  314 tctttcctaatagtttctc-tgata-tttttctaggtctgcctctgcctctt 363  Q
    |||||||| |||||||||| | ||| ||||||||||||| ||||| ||||||    
T  54128551 tctttccttatagtttctcttaatagtttttctaggtcttcctctacctctt 54128500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 376
Target Start/End: Original strand, 54364987 - 54365148
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| |||||||| | | |||| ||||||||||||| |||| | |||| |||||| |||||  ||||||||  ||| ||| |||| ||| |||||     
T  54364987 caagccttatcccactagt-gtggtcggctacatggatcaaattacgtcatagtgttctatcataaaccatattttggtctaacacatt-aatctccaag 54365084  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctgcctat 376  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||| ||||    
T  54365085 tctttcctaatagtttctcttatagtttttctaggtcttcctctgcctctcgtggtctgactat 54365148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 343
Target Start/End: Original strand, 45289102 - 45289230
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||  || |||||||||| ||||||| |||||||||| |||||  ||||||||   ||||||||| ||||| || |||    
T  45289102 caagccttatcccactaagtggggttggcgacatggatcaaattatgctataatgttctatcataaaccatatttggatccaactca-ttaatctctaaa 45289200  T
Q  314 tctttcctaatagtttctctgatatttttc 343  Q
    |||||||||||||||||||| ||| |||||    
T  45289201 tctttcctaatagtttctcttatagttttc 45289230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 350
Target Start/End: Original strand, 19676092 - 19676228
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||||||||||||||||| || | ||||||||| ||| ||||||  |||||||   ||||||||| ||||  || |||    
T  19676092 caagccttatcccactaagtggggtcagctacatggatcaaatcacgccataatgctctatcatacagcatatttggatccaactca-ttaacctctaaa 19676190  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtct 350  Q
    | |||||||||||||||||| | | |||||||||||||    
T  19676191 tttttcctaatagtttctcttacagtttttctaggtct 19676228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 362
Target Start/End: Complemental strand, 49841868 - 49841741
Alignment:
Q  233 tggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctc 332  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||  |||||||||  ||||||||| ||||| |  | ||||||  ||||||||||||    
T  49841868 tggggtcagctacatggatcaaattatgccataatgttctatcatataccatatttcgatccaactca-ttaatctttagatctttgttaatagtttctc 49841770  T
Q  333 tgatatttttctaggtctgcctctgcctct 362  Q
    | || ||||||| ||||| ||||| |||||    
T  49841769 ttatttttttct-ggtcttcctctacctct 49841741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 48508506 - 48508357
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||||| |||||| |||||  |||||||| | ||||||||| || |  || |||    
T  48508506 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactca-ttgacctctaaa 48508408  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  48508407 tcctttctaatggtttctcttatagttttcctaggtcttcctctacctctt 48508357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 50960648 - 50960797
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||  |||| |||||||| ||||  |||||||| ||| | |||| ||||||||   ||||||||| ||||| || |||    
T  50960648 caagccttatcccactaagtggggttggctaaatggatcaaattacaccataatggtctatgatacaccatatttggatccaactca-ttaatctctaaa 50960746  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
     ||||||||||||||||||| | | ||||||||||||| ||||| ||||||    
T  50960747 cctttcctaatagtttctcttaaattttttctaggtcttcctctccctctt 50960797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 350
Target Start/End: Original strand, 34844585 - 34844720
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    ||||||| ||| ||| | ||||||| ||||||||||||||||||| |||||||||||| |||||  |  ||||   ||||| |||| ||||| ||||| |    
T  34844585 aagccttatcctacttagtggggtcggctacatggatcatattataccataatgttctatcataaacagtattctggtccacctca-ttaatctccaagt 34844683  T
Q  315 ctttcctaatagtttctctgata-tttttctaggtct 350  Q
     |||||||||||||||||| ||| |||||||||||||    
T  34844684 ttttcctaatagtttctcttatagtttttctaggtct 34844720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 329
Target Start/End: Complemental strand, 19758157 - 19758044
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||| |||||||||||| |||||  |||||||    ||||||||| ||||| || |||    
T  19758157 caagccttatcccactaagtggggtc-gctacatggatcaaattataccataatgttctatcataaaccatattgagatccaactca-ttaatctctaaa 19758060  T
Q  314 tctttcctaatagttt 329  Q
    | ||||||||||||||    
T  19758059 tatttcctaatagttt 19758044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 325
Target Start/End: Original strand, 40116349 - 40116459
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| |||||||||  | |||| ||||| ||||||| |||| ||||||||||||| |||||  ||||||||| |||||||||| ||||| || |||    
T  40116349 caagccttatcccactaagcgaggtcggctacgtggatcaaattacgccataatgttctatcataaaccatatttcggtccaactca-ttaatctctaaa 40116447  T
Q  314 tctttcctaata 325  Q
    ||| ||||||||    
T  40116448 tctatcctaata 40116459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 376
Target Start/End: Original strand, 40116520 - 40116641
Alignment:
Q  255 attatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tttttctaggtctgcc 353  Q
    |||| |||| |||||||| |||||  ||||||||| |||||||||| ||||| || |||||| |||||||||||||||| ||| ||||||||||||| ||    
T  40116520 attacgccacaatgttctatcataaaccatatttcggtccaactca-ttaatctctaaatctatcctaatagtttctcttatagtttttctaggtcttcc 40116618  T
Q  354 tctgcctcttgtggtctgcctat 376  Q
    | || |||| ||| |||| ||||    
T  40116619 tttggctctagtgatctgactat 40116641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 52927859 - 52927917
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  52927859 caagccttatcccactaagtggggtcggctacatggatcaaattatgccataatgttct 52927917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 23534609 - 23534697
Alignment:
Q  242 ctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttct 331  Q
    |||||||||||| |||| ||||||||||||| |||||   |||||| |||||||||||| ||||| || || ||||||||||||||||||    
T  23534609 ctacatggatcaaattacgccataatgttctatcataaatcatattacagtccaactca-ttaatctctaagtctttcctaatagtttct 23534697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 226 - 323
Target Start/End: Complemental strand, 40991690 - 40991594
Alignment:
Q  226 cactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaa 323  Q
    |||||| ||||||||||||||||||||| ||||  |||||||||||| |||||  ||||||||  |||||||||| ||||| | ||| ||||||||||    
T  40991690 cactaagtggggtcagctacatggatcaaattacaccataatgttctatcataaaccatattttggtccaactca-ttaatcttcaagtctttcctaa 40991594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 29601163 - 29601052
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||| | ||||||||| ||||||||||||||||||||| ||||   ||||||||||| |||||  | |||||| | ||||||||| ||||| || |||    
T  29601163 caagccgtatcccactaagtggggtcagctacatggatcaaattacatcataatgttctatcataaactatatttgaatccaactca-ttaatctctaaa 29601065  T
Q  314 tctttcctaatag 326  Q
    |||||| ||||||    
T  29601064 tctttcttaatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 48734158 - 48734222
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| |||||||||||||||||||||  ||| ||||||||||||| |||||    
T  48734158 caagccttatcccactaagtggggtcagctacatggatcaacttacgccataatgttctatcata 48734222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 329
Target Start/End: Complemental strand, 19737254 - 19737141
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||| |||||||||| | |||||  |||||||    ||||||||| ||||| || |||    
T  19737254 caagccttatcccactaagtggggtc-gctacatggatcaaattataccataatgttttatcataaaccatattgagatccaactca-ttaatctctaaa 19737157  T
Q  314 tctttcctaatagttt 329  Q
    | ||||||||||||||    
T  19737156 tatttcctaatagttt 19737141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 49888454 - 49888361
Alignment:
Q  218 ccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatc 315  Q
    |||||||| ||||| ||||||| ||||||||||||| |||| | |||||||   |||||||  |||||||||||||||||||| |||||||| |||||    
T  49888454 ccttttccaactaagtggggtcggctacatggatcaaattacgtcataatg---tttcataaaccatatttcagtccaactca-ttaatttcaaaatc 49888361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 40672378 - 40672432
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatg 268  Q
    |||||||| ||||||||| || |||||||||||||||||| ||||||||||||||    
T  40672378 caagccttatcccactaagtgaggtcagctacatggatcaaattatgccataatg 40672432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 45374488 - 45374546
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  45374488 caagccttatcccactaagtggggtcagctacatggattaaattacgccataatgttct 45374546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 350
Target Start/End: Original strand, 45486860 - 45486999
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgcca---tatttcagtccaactcatttaatttcc 310  Q
    ||||| || ||||||||| ||||| | ||||||||||||| |||||||||||||||||| |||||  |||   |||||   ||||| ||| ||||| ||     
T  45486860 caagctttatcccactaagtggggccggctacatggatcaaattatgccataatgttctatcataaaccatattatttggttccaagtca-ttaatctca 45486958  T
Q  311 aaatctttcctaatagtttctctgata-tttttctaggtct 350  Q
    || |||||| ||||||||||||| ||| |||||||||||||    
T  45486959 aagtctttcataatagtttctcttatagtttttctaggtct 45486999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 362
Target Start/End: Original strand, 41482183 - 41482298
Alignment:
Q  249 gatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa-tctttcctaatagtttctctgata--tttttcta 345  Q
    ||||| |||| ||||||||||||| |||||  ||| ||||  || ||||||||| ||| |||||| |||||||||||||||||||| | |  ||||||||    
T  41482183 gatcaaattacgccataatgttctatcataaaccagattttggttcaactcatt-aatctccaaagtctttcctaatagtttctcttaaaagtttttcta 41482281  T
Q  346 ggtctgcctctgcctct 362  Q
    ||||| |||||||||||    
T  41482282 ggtcttcctctgcctct 41482298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 12096716 - 12096804
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  12096716 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 12096804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 40106631 - 40106719
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| |||||||  |||||| ||||| |||||| ||||||||||| |||||  ||||||||   |||||||||||    
T  40106631 caagccttatcccactaagtggggtccactacattgatcaaattatgtcataatgttctatcataaaccatatttggatccaactcatt 40106719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 46148299 - 46148235
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    ||||||||  |||||||| ||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  46148299 caagccttgacccactaagtggggtcggctacatggatcaaattacgccataatgttctatcata 46148235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 49042208 - 49042089
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcat-acgccatatttcagtccaactcatttaatttccaa 312  Q
    |||||||| || ||| || ||||||| ||||||||||||| |||| |||||| |||||| |||| |  ||||||||   ||||||||| ||||  || ||    
T  49042208 caagccttatctcaccaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactca-ttaacctctaa 49042110  T
Q  313 atctttcctaatagtttctct 333  Q
    |||||||||||||||||||||    
T  49042109 atctttcctaatagtttctct 49042089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 24541343 - 24541401
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| | ||||||||||| |||| |||||||||||||    
T  24541343 caagccttatcccactaagtggggtcgggtacatggatcaaattacgccataatgttct 24541401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 24778620 - 24778678
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||  ||||||||||||    
T  24778620 caagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttct 24778678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 52139071 - 52138922
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | | |||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  52139071 caagccttatcccactaagtggggtcggctacatggatcaaataacgtcatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 52138973  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  52138972 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 52138922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 52156097 - 52156183
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||  ||||||||   |||||||||||    
T  52156097 agccttatcccactaagtggggtcggctacatggatcagatgacgccatagtgttctatcataaaccatatttggatccaactcatt 52156183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 20208269 - 20208196
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatt 287  Q
    ||||| || ||||||||| ||||||| ||||||||||||| || ||||||||| ||||| ||| | ||||||||    
T  20208269 caagcgttatcccactaaatggggtcggctacatggatcaaatgatgccataaagttctatcaaatgccatatt 20208196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 41530032 - 41529975
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttc 271  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||||| |||||    
T  41530032 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttc 41529975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 5169103 - 5169015
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||| |  ||||||||   |||||||||||    
T  5169103 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 5169015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 14415271 - 14415358
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||| ||| ||||||||| ||||||| |||||||| |||| |||||||||||||||| | |||||  |||||| |  ||||||||||||    
T  14415271 caagtcttatcccactaagtggggtcggctacatg-atcaaattatgccataatgttatatcataaaccatatgtgggtccaactcatt 14415358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 32170664 - 32170592
Alignment:
Q  226 cactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaact 298  Q
    |||||| ||||||| ||||||||||||| |||||| ||||||||| | |||||  |||||||||  |||||||    
T  32170664 cactaagtggggtcggctacatggatcaaattatgtcataatgttatatcatagaccatatttctatccaact 32170592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 329
Target Start/End: Complemental strand, 36304218 - 36304123
Alignment:
Q  233 tggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagttt 329  Q
    ||||||| ||||||||||||| |||| |||||||||| || |||||  ||||||||   ||||||||| ||||| || | ||||||| |||||||||    
T  36304218 tggggtcggctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactca-ttaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 47555343 - 47555431
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||  ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  47555343 caagccttatcccactaagtggggttggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 47555431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 15296178 - 15296060
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| || |||||||||| ||||  |||||||||||| ||  |   |||||||   ||||| ||| ||||  || |||    
T  15296178 caagccttatcccactaagtggggtcggccacatggatcaaattacaccataatgttctatccgaaatcatatttggatccaattca-ttaacctctaaa 15296080  T
Q  314 tctttcctaatagtttctct 333  Q
    ||||||||||||||||||||    
T  15296079 tctttcctaatagtttctct 15296060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 38060976 - 38060897
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    ||||||||| ||||||| ||||||||||||| |||| |||||  |||||| |||||  ||||||||   |||||||||||    
T  38060976 tcccactaagtggggtcggctacatggatcaaattacgccatggtgttctatcataaaccatatttggatccaactcatt 38060897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 39600724 - 39600842
Alignment:
Q  246 atggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tttttct 344  Q
    |||||||| ||||  |||||||||||| || ||  ||| ||||   ||||||||||| ||  || ||||||||| ||||||||||||| ||| |||||||    
T  39600724 atggatcaaattacaccataatgttctatcgtaaaccagatttggatccaactcatt-aacctctaaatctttcttaatagtttctcttatagtttttct 39600822  T
Q  345 aggtctgcctctgcctcttg 364  Q
    |||||| ||||| |||||||    
T  39600823 aggtcttcctctacctcttg 39600842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 7895891 - 7895965
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||| ||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||    
T  7895891 caagccttatcccattaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaattt 7895965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 362
Target Start/End: Original strand, 33755367 - 33755501
Alignment:
Q  226 cactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaata 325  Q
    |||||| ||||||  ||||||| ||||| |||| | ||||||||||  ||| ||  ||||| |  |||||||||||| ||| || || | ||||||||||    
T  33755367 cactaagtggggttggctacatcgatcaaattacgtcataatgttcactcaaac--catatcttggtccaactcatt-aatctctaagtttttcctaata 33755463  T
Q  326 gtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||||| ||| ||||||||||| | |||||||||||    
T  33755464 gtttctcttatagtttttctaggttttcctctgcctct 33755501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 35420539 - 35420482
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| |||||||||| || |||| |||||||||||||    
T  35420539 caagccttatcccactaaatggggtc-gctacatggaccaaattacgccataatgttct 35420482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 39208879 - 39208805
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||| | ||||||||| |||||||  |||||||||||| |||| | ||||||||||| |||||  ||||||||    
T  39208879 caagccatatcccactaactggggtcctctacatggatcaaattacgtcataatgttctatcataaaccatattt 39208805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 40273220 - 40273274
Alignment:
Q  218 ccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||||||||| ||||||| ||||||||||||| || | |||||| ||||||    
T  40273220 ccttttcccactaagtggggtcggctacatggatcaaatgacgccatagtgttct 40273274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 7446314 - 7446277
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatca 253  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  7446314 agccttttcccactaagtggagtcagctacatggatca 7446277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 7454456 - 7454419
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatca 253  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  7454456 agccttttcccactaagtggagtcagctacatggatca 7454419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 37083303 - 37083360
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttc 271  Q
    |||||||| ||||||||| ||||||| |||||| ||| || |||| ||||||||||||    
T  37083303 caagccttatcccactaagtggggtcggctacaaggaccaaattacgccataatgttc 37083360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 49503579 - 49503632
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataat 267  Q
    |||||||| ||||||||| | ||||| ||||||||||||| |||| ||||||||    
T  49503579 caagccttatcccactaagtagggtcggctacatggatcaaattacgccataat 49503632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 52882673 - 52882726
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataat 267  Q
    |||||||| ||||||||| ||||||  ||||||||||||| |||| ||||||||    
T  52882673 caagccttctcccactaagtggggttggctacatggatcaaattacgccataat 52882726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 659796 - 659732
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    ||||||||  |||||||| ||||||| ||||||||||||| |   |||||||||||||| |||||    
T  659796 caagccttaccccactaagtggggtcggctacatggatcaaacactgccataatgttctatcata 659732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 31261049 - 31261101
Alignment:
Q  311 aaatctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    ||||||||| | ||||||||||| ||| ||||||||||||| |||||||||||    
T  31261049 aaatctttcttgatagtttctcttatagtttttctaggtcttcctctgcctct 31261101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 49045106 - 49045042
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||| | ||||||| ||||||||||| | |||  ||||||||||||| |||||    
T  49045106 caagccttgtcccactgagtggggtcggctacatggattaaattcggccataatgttctgtcata 49045042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 51447728 - 51447816
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||| | |||||||| |||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  51447728 caagccttatcccactaaatggggccggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 51447816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 53262412 - 53262324
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||| ||||| || | |||||| |||||| ||| |  ||||||||   |||||||||||    
T  53262412 caagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 53262324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 214 - 366
Target Start/End: Complemental strand, 79784 - 79632
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||||||||||| ||||| ||||||||||||| | || | ||||||||| ||| |||| | ||||||||| ||||| |||| ||||||||||||    
T  79784 caagccttttcccactaagtggggccagctacatggatgaaatcacgccataatggtctatcatgcaccatatttcggtccagctca-ttaatttccaaa 79686  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtg 366  Q
    || ||||||||||||| ||||||| ||||||||||||| |||| ||||||||||    
T  79685 tcattcctaatagtttatctgatagtttttctaggtcttcctcagcctcttgtg 79632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 6788331 - 6788181
Alignment:
Q  221 tttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcc 320  Q
    ||||| ||||| || |||| |||||||| |||| |||| || |||||||||| |||||   ||||||||||||||||||| ||||||||||| |||||||    
T  6788331 tttcctactaagtgaggtcggctacatgaatcaaattacgctataatgttctatcataaatcatatttcagtccaactca-ttaatttccaagtctttcc 6788233  T
Q  321 taatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctg 371  Q
    |||||||| || ||||| ||||||||||||| ||||||||||| ||| ||||    
T  6788232 taatagttcctttgatagtttttctaggtcttcctctgcctctagtgatctg 6788181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 371
Target Start/End: Complemental strand, 9235316 - 9235163
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    ||||||| ||||||||| |||| || ||||||||||||| |||||||||||||||||| |||||  |||||||||  |||| |||| ||||| || | ||    
T  9235316 aagccttatcccactaagtggg-tcggctacatggatcaaattatgccataatgttctatcataaaccatatttcgatccagctca-ttaatctctatat 9235219  T
Q  315 ctttcctaatagtttctctgatatttttctaggtctgcctctgcctcttgtggtctg 371  Q
    ||||| ||||||||||||| |  ||||||||||||| ||||||||||| ||| ||||    
T  9235218 ctttcttaatagtttctctta-gtttttctaggtcttcctctgcctctagtgatctg 9235163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 368
Target Start/End: Complemental strand, 6859652 - 6859498
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| |||||||||| |||||||| | |||||||||||||||||| |||||  ||||||||  | |||| | |  |||| |  |||    
T  6859652 caagccttatcccactaagtggggtcagcaacatggataaaattatgccataatgttctatcataaaccatattttggcccaagt-aactaatctgtaaa 6859554  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggt 368  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||| ||||| |||||    
T  6859553 tctttcctaatagtttctcttatagtttttctaggtcttcctcttcctctagtggt 6859498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 43035206 - 43035104
Alignment:
Q  260 gccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgat-atttttctaggtctgcctctgc 358  Q
    ||||||||||||| |||||| ||||||||| |||||||||| | ||||||||||| ||||||||||||||||| |||  ||||||||| ||| |||||||    
T  43035206 gccataatgttctatcatacaccatatttcggtccaactca-taaatttccaaatttttcctaatagtttctcagatggtttttctagttcttcctctgc 43035108  T
Q  359 ctct 362  Q
    ||||    
T  43035107 ctct 43035104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 301
Target Start/End: Complemental strand, 38830586 - 38830504
Alignment:
Q  218 ccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcat 301  Q
    |||||||||||||| ||||||||||||||||||||| |||| || |||||||||| ||||||  |||||||| |||||||||||    
T  38830586 ccttttcccactaagtggggtcagctacatggatca-attacgctataatgttctatcatacatcatatttcggtccaactcat 38830504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 361
Target Start/End: Complemental strand, 6889240 - 6889117
Alignment:
Q  238 tcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata 337  Q
    |||||||||||||| | |||| ||||||||||||| |||||  ||||||||  | |||||| | ||||| || ||||||||||||||||||||||| |||    
T  6889240 tcagctacatggattaaattacgccataatgttctatcataaaccatattttggcccaact-aattaatctctaaatctttcctaatagtttctcttata 6889142  T
Q  338 -tttttctaggtctgcctctgcctc 361  Q
     |||||||||| || ||||| ||||    
T  6889141 gtttttctaggccttcctcttcctc 6889117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 11675801 - 11675651
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt-cagtccaactcatttaatttccaa 312  Q
    |||||||| ||| ||||| ||||||| ||||||||||| | | || ||||||||||||| |||||  ||||||||  | ||||||||| ||||| || ||    
T  11675801 caagccttatccaactaagtggggtcggctacatggattaaactacgccataatgttctatcataaaccatatttaaaatccaactca-ttaatctctaa 11675703  T
Q  313 atctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    |||| |||||||||||||||| ||| |||||  |||||| ||||||| ||||    
T  11675702 atctgtcctaatagtttctcttatagtttttacaggtcttcctctgcatctt 11675651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 4496655 - 4496506
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || |||||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  4496655 caagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 4496557  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  4496556 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 4496506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 5558412 - 5558338
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||||||||| |||||| |||||  ||||||||    
T  5558412 caagccttatcccactaagtggggtcggctacatggatcaaattatgccatagtgttctatcataaaccatattt 5558338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 355
Target Start/End: Complemental strand, 28140 - 28012
Alignment:
Q  227 actaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatag 326  Q
    ||||| |||||||||||||||| |||| ||||||||||| |||||| ||| |   |||||||   ||||||| ||| ||  || ||||||||||||||||    
T  28140 actaaatggggtcagctacatgtatcaaattatgccatagtgttctatcagaaatcatatttggatccaacttatt-aacctctaaatctttcctaatag 28042  T
Q  327 tttctctgata-tttttctaggtctgcctc 355  Q
    ||||||| ||| ||||||||||||| ||||    
T  28041 tttctcttatagtttttctaggtcttcctc 28012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 418045 - 418158
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||| | |||||| || ||||||| ||||||||||||| |||| ||||||||||||| |||||  ||| ||||   ||||||||| ||||| || |||    
T  418045 caagccatatcccaccaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccacatttggatccaactca-ttaatctctaaa 418143  T
Q  314 tctttcctaatagtt 328  Q
    |||||||||| ||||    
T  418144 tctttcctaaaagtt 418158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 18855878 - 18855804
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||| ||| ||||||||| ||||||| ||||||||||||| ||||||| |||||||||| |||||  ||||||||    
T  18855878 caagtcttatcccactaagtggggtcggctacatggatcaaattatgctataatgttctatcataaaccatattt 18855804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 38685238 - 38685089
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||  ||||||||   ||||||||| || |  || |||    
T  38685238 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactca-ttgacctctaaa 38685140  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  38685139 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 38685089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 12576871 - 12577019
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| || ||||||||||||||||| |||||||| || | || |  |||||||| ||| |||||  |||||||||  | ||||||| ||||| || | |    
T  12576871 caagctttatcccactaattggggtcggctacatgtataaaatgacaccataatggtctatcatataccatatttctattcaactca-ttaatctctaga 12576969  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||| ||||||||| |||  || ||||||||||||| |||||||||||    
T  12576970 tctttcttaatagtttatcttgtagtttttctaggtcttcctctgcctct 12577019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 20457044 - 20456979
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatac 279  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | ||||||||||||| ||||||    
T  20457044 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccataatgttctatcatac 20456979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 29816653 - 29816565
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  29816653 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 29816565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 29922528 - 29922413
Alignment:
Q  241 gctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tt 339  Q
    ||||||||||||| |||| ||||||||||||| || ||  |||  |||||||||||||   ||||| || ||||||||| ||||||||||||| ||| ||    
T  29922528 gctacatggatcaaattacgccataatgttctatcgtaaaccaggtttcagtccaact-tgttaatctctaaatctttcttaatagtttctcttatagtt 29922430  T
Q  340 tttctaggtctgcctct 356  Q
    ||||||| ||| |||||    
T  29922429 tttctagatcttcctct 29922413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 30213846 - 30213758
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  30213846 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 30213758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 38132607 - 38132543
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||||| || |||||||||| |||| ||||||||||||| |||||    
T  38132607 caagccttatcccactaagtggggtcggccacatggatcaaattacgccataatgttctatcata 38132543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 42272746 - 42272690
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||| ||||||||| ||||||||||||||||||||| || | |||||||||||||    
T  42272746 agccttatcccactaagtggggtcagctacatggatcaaatgacgccataatgttct 42272690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 10639573 - 10639424
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| |||||| || ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  10639573 caagccttatcccacaaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 10639475  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  10639474 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 10639424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 12492395 - 12492544
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| |||||||| |||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  12492395 caagccttatcccactaagtggggtcggctacatgcatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 12492493  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  12492494 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 12492544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 27386608 - 27386554
Alignment:
Q  217 gccttttcccactaattggggtcagctacatggatcatattatgccataatgttc 271  Q
    ||||| ||||||||| ||||||| ||||||||||||| |||| ||||||||||||    
T  27386608 gccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttc 27386554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 28985354 - 28985296
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| || ||||||||||    
T  28985354 caagccttgtcccactaagtggggtcggctacatggatcaaattaagctataatgttct 28985296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 42576281 - 42576216
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatac 279  Q
    |||||||| ||||||||| | ||||| ||||||||||||| |||| ||||| ||||||| ||||||    
T  42576281 caagccttatcccactaagtcgggtcggctacatggatcaaattacgccattatgttctatcatac 42576216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 318
Target Start/End: Original strand, 43557847 - 43557947
Alignment:
Q  217 gccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatct 316  Q
    ||||| ||||||||| ||||||| ||||||| |||||  ||| | ||||||||||| |||||  |||||||||  |||||||||  |||| |||||||||    
T  43557847 gccttatcccactaagtggggtcggctacatagatcaacttaagtcataatgttctatcataaaccatatttcgatccaactca-ataatctccaaatct 43557945  T
Q  317 tt 318  Q
    ||    
T  43557946 tt 43557947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 2915507 - 2915571
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||    
T  2915507 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 2915571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 7359272 - 7359328
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgtt 270  Q
    |||| ||| ||||||||| ||||||||||||||||||||| |||| | |||||||||    
T  7359272 caagtcttgtcccactaagtggggtcagctacatggatcaaattacgtcataatgtt 7359328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 11069173 - 11069237
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||| | ||||||||  |||||||||||| |||||||| |||| ||||||||||||| |||||    
T  11069173 caagccatatcccactatgtggggtcagctatatggatcaaattacgccataatgttctatcata 11069237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 28976870 - 28976958
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| |||||||| |||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  28976870 caagccttatcccactaagtggggtcggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 28976958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 30588709 - 30588582
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttccta 322  Q
    ||||||||| ||| ||| |||||||||||||||| | | ||||||||||| | |||  |||||||||  ||||||||| || || || | ||||||| ||    
T  30588709 tcccactaagtggagtcggctacatggatcatatcacgtcataatgttctattataaaccatatttcgatccaactca-ttcatctctagatctttctta 30588611  T
Q  323 atagtttctctgata-tttttctaggtct 350  Q
    | | ||||||| ||| |||||||||||||    
T  30588610 acaatttctcttatagtttttctaggtct 30588582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 9234157 - 9234102
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgt 269  Q
    |||||||| ||||||||| ||||||| | ||||||||||| |||||| ||||||||    
T  9234157 caagccttatcccactaagtggggtcggttacatggatcaaattatgtcataatgt 9234102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 41108752 - 41108795
Alignment:
Q  226 cactaattggggtcagctacatggatcatattatgccataatgt 269  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||    
T  41108752 cactaagtggggtcagctacatggatcaaattacgccataatgt 41108795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 1287590 - 1287739
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| |||||||||||||  | | |||||| ||| || |||||| ||| ||||   ||||||||| || |  || |||    
T  1287590 caagccttatcccactaagtggggtcggctacatggatcaactgacgccatagtgtactatcatacaccaaatttggatccaactca-ttgacctctaaa 1287688  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  1287689 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 1287739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 12534483 - 12534425
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||| | ||||||||| |||||||| ||| |||||||| |||| |||||||||||||    
T  12534483 caagccgtatcccactaactggggtcaactaaatggatcaaattacgccataatgttct 12534425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 13561397 - 13561455
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| ||||||    
T  13561397 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttct 13561455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 347
Target Start/End: Complemental strand, 14668042 - 14667909
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||| ||| ||||||||| ||||||| | ||||||||||| ||||  |||||||||||| |||||  ||||| ||   ||||||||| ||||| || | |    
T  14668042 caagtcttatcccactaagtggggtcggttacatggatcaaattacaccataatgttctatcataaaccatacttggatccaactca-ttaatctctaga 14667944  T
Q  314 tctttcctaatagtttctctgata-tttttctagg 347  Q
    |||||| || ||| |||||| ||| ||||||||||    
T  14667943 tctttcttagtagcttctcttatagtttttctagg 14667909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 27800099 - 27800041
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||  |||||||| |||| ||||| ||||||||||||    
T  27800099 caagccttatcccactaagtggggttggctacatgtatcaaattataccataatgttct 27800041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 32442145 - 32442194
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    ||||||||| ||| ||| ||||||||||||| |||| |||||||||||||    
T  32442145 tcccactaagtggagtcggctacatggatcaaattacgccataatgttct 32442194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 41200360 - 41200421
Alignment:
Q  217 gccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    ||||| ||||||||| ||||||  ||||||||||||| || ||||||||| ||||| |||||    
T  41200360 gccttatcccactaagtggggtaggctacatggatcaaatgatgccataacgttctatcata 41200421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 43423506 - 43423563
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttc 271  Q
    |||||||| |||||||||  |||||  ||||||||||||| |||| ||||||||||||    
T  43423506 caagccttatcccactaaaaggggttggctacatggatcaaattacgccataatgttc 43423563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 3302115 - 3302027
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | ||| || |||||| ||| |  ||||||||   |||||||||||    
T  3302115 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcatt 3302027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 8081974 - 8082034
Alignment:
Q  214 caagccttttcccactaattgggg-tcagctacatggatcatattatgccataatgttctt 273  Q
    |||||||| ||||||||| ||||| || ||||||||||||| || ||| ||||||||||||    
T  8081974 caagccttatcccactaagtgggggtcggctacatggatcaaatcatgtcataatgttctt 8082034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 376
Target Start/End: Complemental strand, 29938314 - 29938224
Alignment:
Q  282 catatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgatatttttctaggtctgcctctgcctcttgtggtctgcctat 376  Q
    ||||||||| ||||||||||| |||    ||||| |||||||||||||||| |   ||||||||||||| ||||| ||||||||| |||| ||||    
T  29938314 catatttcaatccaactcatt-aatcattaaatcattcctaatagtttctcag---tttttctaggtcttcctctacctcttgtgatctgactat 29938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 34516 - 34664
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||| ||| ||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||||  |||||||||| ||||||||| ||||| |  | |    
T  34516 caagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactca-ttaatctttaga 34614  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||| |||| |||||||| ||| ||||||||||||| |||||||||||    
T  34615 tctttcttaatggtttctcttatagtttttctaggtcttcctctgcctct 34664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 215 - 371
Target Start/End: Complemental strand, 8364826 - 8364670
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    |||||||||||||||||  |||||| ||||||||||||| |||| ||||||||||||| |||||  |||| ||||||||||||| | |||||||| ||||    
T  8364826 aagccttttcccactaagcggggtcggctacatggatcaaattacgccataatgttctatcataaaccatgtttcagtccaactta-ttaatttctaaat 8364728  T
Q  315 ctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctg 371  Q
    ||||| ||||||||||||| ||| ||||| ||||||| | ||| ||||| ||| ||||    
T  8364727 ctttcttaatagtttctcttatagtttttttaggtcttcatcttcctctagtgatctg 8364670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 350
Target Start/End: Complemental strand, 31818802 - 31818666
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| ||||||| |||| ||||||| ||||||||||||| |||| | ||||||||||| |||||  ||||| ||   ||||||||| ||||| ||||||    
T  31818802 caagctttttcccgctaagtggggtcggctacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactca-ttaatctccaaa 31818704  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtct 350  Q
     ||||||||||||||||||| ||| |||||||||||||    
T  31818703 cctttcctaatagtttctcttatagtttttctaggtct 31818666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 364
Target Start/End: Original strand, 9593721 - 9593869
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| | ||||||| || ||||||||| |||||||| ||||  |||||||||||| |||||  |||||||    ||||||||||| ||| || ||     
T  9593721 caagccttatgccactaagtgtggtcagctatatggatcaaatta--ccataatgttctatcataaaccatattgggatccaactcatt-aatctctaag 9593817  T
Q  314 tctttcctaatagtttctctgat-atttttctaggtctgcctctgcctcttg 364  Q
    |||||||||||||||||||| || |||||||||||||| ||||| |||||||    
T  9593818 tctttcctaatagtttctcttataatttttctaggtcttcctctacctcttg 9593869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 376
Target Start/End: Original strand, 12133913 - 12134074
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||| | ||    || |||||  ||||||||| |||||||| |||    
T  12133913 caagccttttctcactaagtggggtcggctacatggatcagattatgccataatgttctattatgaatcacatttcgatccaactca-ttaatttctaaa 12134011  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctgcctat 376  Q
     ||||||||||| ||| | | ||| ||||| ||||||| ||| ||||||| ||| |||| ||||    
T  12134012 -ctttcctaatattttatattatagtttttgtaggtcttcctatgcctctagtgatctgactat 12134074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 5096101 - 5095956
Alignment:
Q  218 ccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctt 317  Q
    |||| ||||||||| |||| || ||||||| ||||| |||| ||||||||||||| |||||  ||||||||   ||||||||||| ||   | |||||||    
T  5096101 ccttatcccactaagtgggatcggctacatagatcaaattacgccataatgttctatcataaaccatattttgatccaactcatt-aaccactaaatctt 5096003  T
Q  318 tcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    |||||| |||||||||  || ||||||||||||| ||||| ||||||    
T  5096002 tcctaagagtttctcttctagtttttctaggtcttcctctacctctt 5095956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 30031527 - 30031378
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| || |||| ||||||||||||| |||| |||||| |||||| |||||  |||||||| | ||||||||| || |  || |||    
T  30031527 caagccttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactca-ttgacctctaaa 30031429  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  30031428 tcctttctaattgtttctctaatagttttcctaggtctccctctacctctt 30031378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 12890846 - 12890772
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||||| |||||| |||||  ||||||||    
T  12890846 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatattt 12890772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 9707041 - 9706953
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || |||||||| |||||| ||| |  ||||||||   |||||||||||    
T  9707041 caagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcatt 9706953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 21089668 - 21089604
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||| ||||||||||||||| |  ||||||||||||||| |||||    
T  21089668 caagccttatcccactaagtgggggcagctacatggatcaaacaatgccataatgttctatcata 21089604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 34934841 - 34934929
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  34934841 caagccttatcccactaagtggggtcggctacatggatcaaatgaggccatagtgttctatcatacaccaaatttggatccaactcatt 34934929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 333
Target Start/End: Original strand, 655414 - 655523
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttccta 322  Q
    ||||||||| || ||||| |||||||||||| |||   ||| |||||||| |||||  ||||||||| |||||| ||| ||||| || |||  |||||||    
T  655414 tcccactaagtgaggtcacctacatggatcaaattgcaccacaatgttctgtcataaaccatatttcggtccaattca-ttaatctcgaaagttttccta 655512  T
Q  323 atagtttctct 333  Q
    |||||||||||    
T  655513 atagtttctct 655523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 292
Target Start/End: Complemental strand, 1911623 - 1911573
Alignment:
Q  242 ctacatggatcatattatgccataatgttctttcatacgccatatttcagt 292  Q
    |||||||||||| |||| ||||||||||||| |||||| ||||||||||||    
T  1911623 ctacatggatcaaattacgccataatgttctatcatacaccatatttcagt 1911573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 28085647 - 28085498
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || |  ||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  28085647 caagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 28085549  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  28085548 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 28085498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 31819102 - 31819014
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    ||||| || ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  31819102 caagcattatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 31819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 1008063 - 1008120
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||||||||||||| ||||||  ||||| ||||||| |||| |||||||||||||    
T  1008063 caagccttttcccactaagtggggt-tgctacctggatcaaattacgccataatgttct 1008120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 3210541 - 3210607
Alignment:
Q  236 ggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||||||||||||| ||||  |||||||||||| |||||   ||||||||  |||||||||||    
T  3210541 ggtcagctacatggatcaaattacaccataatgttctatcataactcatatttccatccaactcatt 3210607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 5897728 - 5897615
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| |||| || ||||||||||||| |||| | |||||| ||||  ||||  ||||||||   |||||| || ||||| || |||    
T  5897728 caagccttatcccactaagtgggatccgctacatggatcaaattacgtcataatattctaccatataccatattttgatccaacaca-ttaatatctaaa 5897630  T
Q  314 tctttcctaatagtt 328  Q
    ||||| |||||||||    
T  5897629 tcttttctaatagtt 5897615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 7513010 - 7513076
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttc 289  Q
    ||||||||| |||||||| |||||| ||||| |||| | ||||||||||| |||||  |||||||||    
T  7513010 tcccactaagtggggtcaactacatagatcaaattacgtcataatgttctatcataaaccatatttc 7513076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 6293403 - 6293519
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||| || || |   |||||||||| ||| |||||  |||||||||  || |||||||| ||| || | |    
T  6293403 caagccttatcccactaagtggggtcggctacattgaccaaacgttgccataatgctctatcatataccatatttctatctaactcatt-aatatctaga 6293501  T
Q  314 tctttcctaatagtttct 331  Q
    | ||||||||||||||||    
T  6293502 tatttcctaatagtttct 6293519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 34143776 - 34143864
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||| ||| |||||||  |||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  34143776 caagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 34143864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 34156392 - 34156480
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||| ||| |||||||  |||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  34156392 caagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 34156480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 366
Target Start/End: Original strand, 28627945 - 28628096
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    ||||||| ||||||||| ||| ||| ||||||||||||| |||| ||||||||||||| |||||  ||| ||||   ||||||||| ||||| || ||||    
T  28627945 aagccttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactca-ttaatctctaaat 28628043  T
Q  315 ctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtg 366  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||    
T  28628044 ctttcctaatagtttctcttatagtttttctaggtcttcctctacctcttgtg 28628096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 38135224 - 38135372
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| |||||| || |||||||||||| |||||||| |||| |||||||| |||| |||||  ||||||||| |||||||||| ||||| || |||    
T  38135224 caagccttgtcccaccaagtggggtcagctagatggatcaaattacgccataatattctatcataacccatatttcggtccaactca-ttaatctctaaa 38135322  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||  ||||||||||||| ||| ||||||||||||| | |||||||||    
T  38135323 tcttttttaatagtttctcttatactttttctaggtcttcatctgcctct 38135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 243 - 376
Target Start/End: Original strand, 26741934 - 26742069
Alignment:
Q  243 tacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtt--tctctgata-tt 339  Q
    ||||| ||||| |||| ||||||||||||| |||||  ||||||||| ||||||||||||| |||||||||| |||||||||||||  ||| ||||| ||    
T  26741934 tacattgatcaaattacgccataatgttctatcataaaccatatttcggtccaactcattt-atttccaaatatttcctaatagtttatctttgatagtt 26742032  T
Q  340 tttctaggtctgcctctgcctcttgtggtctgcctat 376  Q
    |||||| |||| ||||||||||| ||| |||| ||||    
T  26742033 tttctacgtcttcctctgcctctagtgatctgactat 26742069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 40979939 - 40980088
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||||| |||||| |||||  ||||||||   ||||||||||| |  | | |||    
T  40979939 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattgacct-ctaaa 40980037  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    ||||| |||||||||||||| ||| |||| |||||||| ||||| ||||||    
T  40980038 tcttttctaatagtttctcttatagttttcctaggtcttcctctacctctt 40980088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 355
Target Start/End: Original strand, 9210716 - 9210856
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||| | |||||  ||||||||   ||||||||| ||||  || ||||    
T  9210716 aagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgttgtatcataaaccatatttggatccaactca-ttaacctctaaat 9210814  T
Q  315 ctttcctaatagtttctctgata-tttttctaggtctgcctc 355  Q
     |||||||| ||||||||| ||| |||| |||||||| ||||    
T  9210815 ttttcctaaaagtttctcttatagttttcctaggtcttcctc 9210856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 359
Target Start/End: Original strand, 47796168 - 47796308
Alignment:
Q  219 cttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatcttt 318  Q
    ||||||| |||||  ||| || ||| ||||||||| |||| |||||||| |||| |||||  |||||||||||||||||| | |||||||| ||||||||    
T  47796168 cttttccgactaagcgggatcggctgcatggatcaaattacgccataatattctatcataaaccatatttcagtccaactta-ttaatttctaaatcttt 47796266  T
Q  319 cctaatagtttctctgat-atttttctaggtctgcctctgcc 359  Q
    |||||||| |||||| || |||||||| ||||| | ||||||    
T  47796267 cctaataggttctcttataatttttctcggtcttcatctgcc 47796308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 333
Target Start/End: Original strand, 40391845 - 40391952
Alignment:
Q  225 ccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaat 324  Q
    ||||||| ||||||| | || |||||||| |||| ||||||||||||| ||||| |||||||||| |||||||| | |||||||| ||||| |||||| |    
T  40391845 ccactaagtggggtcggttagatggatcaaattacgccataatgttctatcataagccatatttcggtccaactta-ttaatttctaaatcattcctact 40391943  T
Q  325 agtttctct 333  Q
    |||||||||    
T  40391944 agtttctct 40391952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 329
Target Start/End: Original strand, 2882747 - 2882861
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||||||||| |||||| || ||||||||| || ||||| |||| ||||||||||||| |||||  |||| ||||  ||||||||| ||||||||||||    
T  2882747 caagccttttctcactaagtgaggtcagctaaatagatcaaattacgccataatgttctatcataaaccatgtttcgatccaactca-ttaatttccaaa 2882845  T
Q  314 tctttcctaatagttt 329  Q
      ||||||||||||||    
T  2882846 ggtttcctaatagttt 2882861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 329
Target Start/End: Original strand, 27893574 - 27893688
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| || |||||| | ||||| |||||||| |||| |||||||||||||||||| |||||   |||||||| ||||| |||| ||||| || |||    
T  27893574 caagccttatcgcactaagtagggtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctca-ttaatctctaaa 27893672  T
Q  314 tctttcctaatagttt 329  Q
    |||||| |||||||||    
T  27893673 tctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 355
Target Start/End: Complemental strand, 42187711 - 42187572
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccat-aatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||||| ||||||||| ||||||| ||||||||||||| |||| ||||| |||||||| |||||  ||| ||||   ||||||| | ||||| || |||    
T  42187711 aagccttatcccactaagtggggtcggctacatggatcaaattacgccataaatgttctatcataaacca-atttggatccaact-aattaatctctaaa 42187614  T
Q  314 tctttcctaatagtttctctgatatttttctaggtctgcctc 355  Q
    | |||||||||||||||||| ||| |||| ||||||| ||||    
T  42187613 tatttcctaatagtttctcttataattttttaggtcttcctc 42187572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 362
Target Start/End: Complemental strand, 45601747 - 45601599
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| || | |||||||||||||||| ||||  ||||| |||||| |||||   |||||||   ||||||||| ||||| || | |    
T  45601747 caagccttatcccactaagtgagttcagctacatggatcaaattacaccatagtgttctatcataaatcatattttgatccaactca-ttaatctctaga 45601649  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||| |||| |||||||| ||| ||||||||||||| ||||| |||||    
T  45601648 tctttcttaatggtttctcttatagtttttctaggtcttcctctacctct 45601599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 2885733 - 2885821
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||  ||||| |||||| |||||  ||||||||  ||||||||||||    
T  2885733 caagccttatcccactaagtggggtcggctacatggatcaaattacaccatagtgttctatcataaaccatatttgggtccaactcatt 2885821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 31681031 - 31681119
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||| | |||| | |||| ||||| |||||||||   |||||||||||    
T  31681031 caagccttttcccactaagtggggtcggctacatggatcaaattacgtcatagtattctatcataagccatatttggatccaactcatt 31681119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 34341406 - 34341494
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| | ||||||| ||||||| ||||||| | ||| |||| ||||||||||||| |||||  |||||||||| |||||||||||    
T  34341406 caagccttattccactaaatggggtcggctacattggtcaaattacgccataatgttctatcataaaccatatttcaatccaactcatt 34341494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 36101788 - 36101876
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| |||||||| |||||||||||| |||| | ||||||||||| |||||  ||||||||   |||||||||||    
T  36101788 caagccttatcccactaagtggggtcaactacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcatt 36101876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 11594231 - 11594082
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  11594231 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 11594133  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  11594132 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 11594082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 14057748 - 14057631
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    ||||||| ||| ||||| ||||||  ||||||||||||| ||||  |||||||||||| |||||  |||||||| | || ||| || ||||  || ||||    
T  14057748 aagccttatcctactaagtggggttggctacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgca-ttaacctctaaat 14057650  T
Q  315 ctttcctaatagtttctct 333  Q
    |||||||||||||||||||    
T  14057649 ctttcctaatagtttctct 14057631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 14367776 - 14367659
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    ||||||| ||| ||||| ||||||  ||||||||||||| ||||  |||||||||||| |||||  |||||||| | || ||| || ||||  || ||||    
T  14367776 aagccttatcctactaagtggggttggctacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgca-ttaacctctaaat 14367678  T
Q  315 ctttcctaatagtttctct 333  Q
    |||||||||||||||||||    
T  14367677 ctttcctaatagtttctct 14367659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 34869691 - 34869542
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||||| ||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  34869691 caagccttatcccactaattagggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 34869593  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  34869592 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 34869542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 35906212 - 35906361
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  35906212 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctcgaaa 35906310  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  35906311 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 35906361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 6263530 - 6263477
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataat 267  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||    
T  6263530 caagccttatcccactaagtggggtcggctacatggatcaaattatgccataat 6263477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 329
Target Start/End: Original strand, 28541954 - 28542069
Alignment:
Q  214 caagccttttcccactaattgggg-tcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaa 312  Q
    |||||||| ||| ||||| ||||| || |||||| |||||| | |||||||| ||||||| |||||  ||||| |||| ||||||||| ||||| || ||    
T  28541954 caagccttatccaactaagtgggggtcggctacacggatcaaactatgccatgatgttctatcataaaccatagttcaatccaactca-ttaatctctaa 28542052  T
Q  313 atctttcctaatagttt 329  Q
    ||||||| |||||||||    
T  28542053 atctttcttaatagttt 28542069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 28708652 - 28708596
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgtt 270  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||||||||||    
T  28708652 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 28708596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 47852358 - 47852270
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| |||| |||| ||||||| ||||||||||||| |||| ||||||||||||| | |||| ||| ||||   |||||||||||    
T  47852358 caagccttatccccctaagtggggtcggctacatggatcaaattacgccataatgttctatgatacaccacatttggatccaactcatt 47852270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 356
Target Start/End: Complemental strand, 12966287 - 12966145
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| |||| || |||||||| |||| |  ||| ||||||| | | |||||  |||||||||  ||||| ||||| ||| || |||    
T  12966287 caagccttatcccactaagtgggatcggctacatgaatcaaacaatggcataatgatttatcatataccatatttctatccaaatcatt-aatctctaaa 12966189  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctct 356  Q
    | |||| ||||||||||||| ||| ||||||||||||| |||||    
T  12966188 tatttcttaatagtttctcttatagtttttctaggtcttcctct 12966145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 302
Target Start/End: Complemental strand, 42969968 - 42969881
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    ||||||| ||||||||| ||||||| ||||||||||||| ||||| | |||||||||  |||||  ||||||||   |||||||||||    
T  42969968 aagccttatcccactaagtggggtcggctacatggatcaaattatacgataatgttcaatcataaaccatatttggatccaactcatt 42969881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 1011317 - 1011169
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||| ||||| ||||  |||||||||||| || ||  |||||||  | ||||| ||| ||||  |  |||    
T  1011317 caagccttatcccactaagtggggtcggctacatagatcaaattacaccataatgttctatcctaaaccatattgga-tccaaatca-ttaacctttaaa 1011220  T
Q  314 tctttcctaatagtttctctgat-atttttctaggtctgcctctgcctctt 363  Q
    | |||||||||| ||||||| || |||||||||||||| ||||| ||||||    
T  1011219 tatttcctaataatttctctcataatttttctaggtcttcctctacctctt 1011169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 362
Target Start/End: Complemental strand, 1569268 - 1569139
Alignment:
Q  233 tggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctc 332  Q
    |||||||  |||||| ||||| |||| ||| ||||||||| |||||  ||||||||   ||||||||| ||||| || | ||||||| |||||||| |||    
T  1569268 tggggtcgactacatcgatcaaattacgccgtaatgttctatcataaaccatattttgatccaactca-ttaatctctagatctttcttaatagttactc 1569170  T
Q  333 tgata-tttttctaggtctgcctctgcctct 362  Q
    | ||| |||||||||| || |||||||||||    
T  1569169 ttatagtttttctaggactacctctgcctct 1569139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 28208339 - 28208413
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||  ||||||||    
T  28208339 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatattt 28208413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 39906383 - 39906457
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||    
T  39906383 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaattt 39906457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 45836495 - 45836581
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||  ||||||||   |||||||||||    
T  45836495 agccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcatt 45836581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 6375139 - 6375074
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatac 279  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||||||    
T  6375139 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatac 6375074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 36239834 - 36239934
Alignment:
Q  241 gctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgatattt 340  Q
    ||||||||||||| |||| ||||||||||||| |||||   |||||||   ||||||||  ||||| || |||| |||||||||||||||||| ||| ||    
T  36239834 gctacatggatcaaattacgccataatgttctatcataaagcatatttggatccaactc-gttaatctctaaatttttcctaatagtttctcttatagtt 36239932  T
Q  341 tt 342  Q
    ||    
T  36239933 tt 36239934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 362
Target Start/End: Complemental strand, 47848912 - 47848797
Alignment:
Q  246 atggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tttttct 344  Q
    |||||||| ||||  |||||||||||| |||||  ||||||||   |||| |||| |||||  |||||||||||| |||||||||||| ||| |||||||    
T  47848912 atggatcaaattaaaccataatgttctatcataaaccatatttggatccagctca-ttaatccccaaatctttcc-aatagtttctcttatagtttttct 47848815  T
Q  345 aggtctgcctctgcctct 362  Q
    || ||| |||||||||||    
T  47848814 agttcttcctctgcctct 47848797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 7273371 - 7273283
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| | |||| || | | |||||  |||||||| | |||||||||||    
T  7273371 caagccttatcccactaagtggggtcggctacatggatcaaattacgtcatagtgctatatcataaaccatatttgaatccaactcatt 7273283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 12841286 - 12841350
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||    
T  12841286 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 12841350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 21078188 - 21078100
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||  ||| ||||||||||||| || | ||||||||||||| |||||| ||| ||||   |||||||||||    
T  21078188 caagccttatcccactaaatgaagtcggctacatggatcaaatgacgccataatgttctatcatacaccaaatttggatccaactcatt 21078100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 27649051 - 27648963
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||| | |||||| |||||  ||| ||||   |||||||||||    
T  27649051 caagccttatcccactaagtggggtcggctacatggatcaaattacgccacagtgttctatcataaaccaaatttggatccaactcatt 27648963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 30814136 - 30814200
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    ||||||| |||||||||| ||||||| ||||||||||||| |||| |  |||||||||| |||||    
T  30814136 caagcctcttcccactaagtggggtcggctacatggatcaaattacgtgataatgttctatcata 30814200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 31682613 - 31682677
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||    
T  31682613 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 31682677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 36652261 - 36652189
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||    
T  36652261 agccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaattt 36652189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 342
Target Start/End: Original strand, 40149024 - 40149150
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| |||  || ||||||| ||||| |||  ||||||||||||| |||||  ||||||||  |||||||||| ||  | |||||     
T  40149024 caagccttatcccactaagtggattcggctacatagatcaaattgcgccataatgttctatcata-accatattttggtccaactca-ttgctctccaag 40149121  T
Q  314 tctttcctaatagtttctctgatattttt 342  Q
    ||||||||| |||||||||| ||| ||||    
T  40149122 tctttcctagtagtttctcttatagtttt 40149150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 43281945 - 43281857
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||| |  ||||||||   |||||||||||    
T  43281945 caagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 43281857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 46355867 - 46355955
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| || |||||| ||||||| ||||||||||||| || ||| |||| |||||| |||||| ||| ||||   |||||||||||    
T  46355867 caagccttatctcactaagtggggtcggctacatggatcaaatgatggcatagtgttctatcatacaccagatttggatccaactcatt 46355955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 40630705 - 40630666
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatca 253  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  40630705 caagccttttcccactaagtggggtcggctacatggatca 40630666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 37618216 - 37618142
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || |  ||||| |||||| |||||| ||| ||||    
T  37618216 caagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaattt 37618142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 350
Target Start/End: Complemental strand, 37976479 - 37976370
Alignment:
Q  241 gctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tt 339  Q
    ||||||||||||  |||  ||||||||||||| |||||  ||||||||   ||||||||| ||||| || ||||||||| || ||||||| || ||| ||    
T  37976479 gctacatggatctaatttagccataatgttctatcataaaccatatttggatccaactca-ttaatctctaaatctttcatattagtttcacttatagtt 37976381  T
Q  340 tttctaggtct 350  Q
    |||||||||||    
T  37976380 tttctaggtct 37976370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 47652818 - 47652760
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| |||||| ||||||  ||| |||||||||||||    
T  47652818 caagccttatcccactaagtggggtcggctacagggatcaagttacgccataatgttct 47652760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 27021745 - 27021794
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    ||||||||| ||||||| || |||||||||| ||| ||||||||||||||    
T  27021745 tcccactaagtggggtcggcaacatggatcaaattgtgccataatgttct 27021794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 4604818 - 4604754
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||| ||| ||||||||| ||||||  ||||||||||||| | || ||||||||||||| |||||    
T  4604818 caagtcttatcccactaagtggggttggctacatggatcaaagtacgccataatgttctatcata 4604754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 5418345 - 5418293
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataa 266  Q
    |||||||| ||||||||| |||||||  |||||||||||| |||| |||||||    
T  5418345 caagccttatcccactaaatggggtcgactacatggatcaaattacgccataa 5418293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 20158682 - 20158726
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatatta 258  Q
    |||||||| ||||||||| | ||||||||||||||||||| ||||    
T  20158682 caagccttatcccactaagtagggtcagctacatggatcaaatta 20158726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 28562464 - 28562528
Alignment:
Q  302 ttaatttccaaatctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgt 365  Q
    ||||| || ||||||||| ||||||||||||| ||| ||||||||||||  ||||| ||||||||    
T  28562464 ttaatctctaaatctttcataatagtttctcttatattttttctaggtcatcctctacctcttgt 28562528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 376
Target Start/End: Original strand, 30814780 - 30814844
Alignment:
Q  313 atctttcctaatagtttctctgatatt-tttctaggtctgcctctgcctcttgtggtctgcctat 376  Q
    ||||||| ||||||||||||| ||| | ||||||||||| ||||||||||| ||| |||| ||||    
T  30814780 atctttcttaatagtttctcttatagtgtttctaggtcttcctctgcctctagtgatctgactat 30814844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 33732103 - 33732030
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttc 289  Q
    |||||||| ||||||||| ||||  | ||||||||||||| ||  |||||||||||||| |||||  |||||||||    
T  33732103 caagccttatcccactaagtgggaccggctacatggatcaaat--tgccataatgttctatcataaaccatatttc 33732030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 34035165 - 34035253
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||  ||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||||   ||||||||   |||||||||||    
T  34035165 caagcctaatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatgaaccatatttggatccaactcatt 34035253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 253
Target Start/End: Original strand, 45841018 - 45841046
Alignment:
Q  225 ccactaattggggtcagctacatggatca 253  Q
    |||||||||||||||||||||||||||||    
T  45841018 ccactaattggggtcagctacatggatca 45841046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 52532627 - 52532745
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||||||||||| ||||||| |||||||| |||| |||| ||||||||||||| |||||  ||||||||   ||||||||| |||||||| |||    
T  52532627 caagccttttcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactca-ttaatttctaaa 52532725  T
Q  314 tctttcctaatagtttctct 333  Q
    ||||||||||||||||||||    
T  52532726 tctttcctaatagtttctct 52532745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 362
Target Start/End: Complemental strand, 2544864 - 2544721
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||| ||||||| ||||||| ||||||||||||| |||||||||||||||||| | |||  |||||||||  ||||||||| || |||||||||    
T  2544864 caagccttttaccactaagtggggtcggctacatggatcaaattatgccataatgttctattataaaccatatttcgctccaactca-ttgatttccaaa 2544766  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    ||||     ||||||||||||||| ||||||||||||| ||||| |||||    
T  2544765 tctt-----atagtttctctgatagtttttctaggtcttcctctacctct 2544721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 7133313 - 7133429
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||| |||| | || |||||| |||||||||| |||||| |||||    
T  7133313 caagccttttcccactaagtggggtcagctacatggatcaaattaggccaaaatgttctatcattcaccgtatttcggtccaactca-ttaattaccaaa 7133411  T
Q  314 tctttcctaatagtttct 331  Q
    || || ||||||||||||    
T  7133412 tcatttctaatagtttct 7133429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 36339815 - 36339962
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| |||||||||||| ||| ||||||||||||||||| ||||   ||||||||| | ||||   |||| |||| |||||||||| ||||||| ||||    
T  36339815 caagcattttcccactaagtggagtcagctacatggatcaaattacttcataatgttttatcattaaccatgtttctgtccaactca-ttaattt-caaa 36339912  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  36339913 tctttcctaatagtttctctgatagtttttctaggtcttcctctacctct 36339962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 340
Target Start/End: Complemental strand, 50846833 - 50846708
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| |||||||||||| ||| ||| ||||||| ||||| |||||||||||||||||| |||||  | ||||||  || ||||||  ||||||||||||    
T  50846833 caagcattttcccactaagtggtgtcggctacatagatcaaattatgccataatgttctatcataaactatattttggttcaactc-gttaatttccaaa 50846735  T
Q  314 tctttcctaatagtttctctgatattt 340  Q
    ||||||| |||||||||||||||||||    
T  50846734 tctttccaaatagtttctctgatattt 50846708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 376
Target Start/End: Complemental strand, 8796480 - 8796318
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||| | |||| ||||||||||||| |||||  |||||||||| ||||| ||| ||||| || | |    
T  8796480 caagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtca-ttaatatctaga 8796382  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctgcctat 376  Q
    |||||| ||||||||||||| | | ||||| | ||||| ||||||||||| ||| |||| ||||    
T  8796381 tctttcttaatagtttctcttaaagtttttattggtcttcctctgcctctagtgatctgactat 8796318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 324
Target Start/End: Original strand, 27072498 - 27072607
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||||||||||||||||    |||| ||||||||||||| |||| ||||||||||||| |||||  ||||||||| ||||||||| ||||||||| |||    
T  27072498 caagccttttcccactaagcatggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttctgtccaactc-tttaatttctaaa 27072596  T
Q  314 tctttcctaat 324  Q
    |||||||||||    
T  27072597 tctttcctaat 27072607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 223 - 371
Target Start/End: Original strand, 28511821 - 28511969
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttccta 322  Q
    ||||||||| ||||||| ||||||| ||||| |||| ||||||||||||| |||||  |||| |||  |||||||||| ||||| ||||| |||||||||    
T  28511821 tcccactaagtggggtcggctacattgatcaaattacgccataatgttctatcataaaccatgttttggtccaactca-ttaatctccaagtctttccta 28511919  T
Q  323 atagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctg 371  Q
     || ||||||| ||| |||||||||||||  |||||||||| ||| ||||    
T  28511920 gtaatttctctaatagtttttctaggtctttctctgcctctagtgatctg 28511969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 350
Target Start/End: Complemental strand, 41560500 - 41560364
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| ||||||||||||| |||||  ||||||||   ||||||||| ||||| || |||    
T  41560500 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactca-ttaatctctaaa 41560402  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtct 350  Q
    | | |||||||||||||||| |||  ||||||||||||    
T  41560401 tgtatcctaatagtttctcttatagcttttctaggtct 41560364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 366
Target Start/End: Original strand, 32404539 - 32404689
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatc 315  Q
    |||||| ||||||||| ||||||| ||||||||||||| |||| ||||| ||||| | |||||  |||| |||   |  |||||||| ||| || |||||    
T  32404539 agccttatcccactaagtggggtcggctacatggatcaaattacgccattatgttatatcataaaccatgtttggatttaactcatt-aatctctaaatc 32404637  T
Q  316 tttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtg 366  Q
    |||||||||||||||||| ||| ||||| ||||||| ||||| |||||||||    
T  32404638 tttcctaatagtttctcttatagtttttgtaggtcttcctctacctcttgtg 32404689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 329
Target Start/End: Original strand, 35828573 - 35828687
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||| |||||||||||||  |||||| | ||||||||||| ||  |||||||||||||| || ||  |||||||||  ||||||||| ||||||  ||||    
T  35828573 caagtcttttcccactaagcggggtcggttacatggatcaaatattgccataatgttctatcgtaaaccatatttccatccaactca-ttaattatcaaa 35828671  T
Q  314 tctttcctaatagttt 329  Q
    ||||||||||||||||    
T  35828672 tctttcctaatagttt 35828687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 9599409 - 9599554
Alignment:
Q  218 ccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctt 317  Q
    |||||||||||||| |  |||||||||||||||||| |||| ||||||| ||||| |||||  |||||| |   || |||||| ||||  || |||| ||    
T  9599409 ccttttcccactaagtaaggtcagctacatggatcaaattacgccataacgttctatcataaaccatatctggatcaaactca-ttaaactctaaatatt 9599507  T
Q  318 tcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    ||||||||||||||||  || ||||||||||||| ||||| ||||||    
T  9599508 tcctaatagtttctcttgtagtttttctaggtcttcctctacctctt 9599554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 52561600 - 52561749
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||  |||||||||||||  |  |  ||||||||   ||||||||| ||||  || |||    
T  52561600 caagccttatcccactaagtggggtcggctacatggatcaaatttcgccataatgttctacccgaaaccatatttggatccaactca-ttaacctctaaa 52561698  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    |||||||||| ||||||||| ||| |||||||| |||| ||||| ||||||    
T  52561699 tctttcctaacagtttctcttatagtttttctaagtcttcctctacctctt 52561749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 220 - 333
Target Start/End: Complemental strand, 1661684 - 1661572
Alignment:
Q  220 ttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttc 319  Q
    |||||||||||| |||||||| |||||  |||||  ||| |||| |||||||| ||| |  ||| ||||| ||||||||| || |||||| |||||||||    
T  1661684 ttttcccactaagtggggtcaactacagtgatcaatttacgccaaaatgttctatcacaaaccacatttcggtccaactcgtt-aatttctaaatctttc 1661586  T
Q  320 ctaatagtttctct 333  Q
    ||||||||||||||    
T  1661585 ctaatagtttctct 1661572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 349
Target Start/End: Complemental strand, 29129055 - 29128919
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatgg-atcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaa 312  Q
    |||||||| || |||||| ||||||| ||||||||| |||||||||  |||||||||||| |||||  ||||||||   |||||||   ||||  || ||    
T  29129055 caagccttatctcactaagtggggtcggctacatgggatcatattacaccataatgttctatcataaaccatatttggatccaact-tgttaacctctaa 29128957  T
Q  313 atctttcctaatagtttctctgata-tttttctaggtc 349  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  29128956 atctttcctaatagtttctcttatagtttttctaggtc 29128919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 362
Target Start/End: Complemental strand, 38869153 - 38869005
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| |||||||||||| ||||||| ||||||||||||| |  | ||||||||||||| |||||  |||||| ||  |||||| || |||||  | | |    
T  38869153 caagcattttcccactaagtggggtcggctacatggatcaaacgacgccataatgttctatcatataccatatatctatccaaccca-ttaatcgctaga 38869055  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    |||||| ||||| ||||||| ||| ||||||||||||| | |||||||||    
T  38869054 tctttcttaataatttctcttatagtttttctaggtcttcttctgcctct 38869005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 43375618 - 43375722
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttccta 322  Q
    ||||||||| |||| |  ||||||||||||| |||||| ||||||||||| ||||   ||||||||| |||||||||| ||||| || ||||||||| ||    
T  43375618 tcccactaagtgggattggctacatggatcaaattatgtcataatgttctatcatgaaccatatttcggtccaactca-ttaatctctaaatctttctta 43375716  T
Q  323 atagtt 328  Q
    ||||||    
T  43375717 atagtt 43375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 17269000 - 17269064
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  17269000 caagacttttcccactaaatggggtcggctacatggatcaaattacgccataatgttctatcata 17269064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 25715337 - 25715425
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| || |||| ||||||||||||| |||| |||||||| |||| |||||  ||||||||| || |||||||||    
T  25715337 caagccttatcccactaagtgaggtcggctacatggatcaaattacgccataatattctatcataaaccatatttcggttcaactcatt 25715425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 37294127 - 37294183
Alignment:
Q  222 ttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||||    
T  37294127 ttcccactaaatggggtcagctacatggatcaaattacgccataatgttctatcata 37294183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 348
Target Start/End: Original strand, 37462887 - 37463020
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| ||||||||||||| | |||  |||||||| | || |||||| ||||  || |||    
T  37462887 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatgataaaccatatttga-tcaaactca-ttaacctctaaa 37462984  T
Q  314 tctttcctaatagtttctctgata-tttttctaggt 348  Q
    || ||||| || |||||||| ||| |||||||||||    
T  37462985 tcattcctgatcgtttctcttatagtttttctaggt 37463020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 1211016 - 1210867
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  1211016 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 1210918  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  1210917 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 1210867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 8676883 - 8676994
Alignment:
Q  224 cccactaattggggtcagctacatggatcatattatgccataatgttctttcata---cgccatatttcagtccaactcatttaatttccaaatctttcc 320  Q
    ||||||||  || ||| ||||||||||||| ||||||||||||| |||| |||||   | ||||||||| |||||||||| ||||| || ||||||||      
T  8676883 cccactaaccggagtcggctacatggatcaaattatgccataatattctatcatagaccaccatatttcggtccaactca-ttaatctctaaatcttttt 8676981  T
Q  321 taatagtttctct 333  Q
    |||||||||||||    
T  8676982 taatagtttctct 8676994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 22175416 - 22175342
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||| | |||||||||||| |||||  ||||||||    
T  22175416 caagccttatcccactaagtggggtcggctacatggatcaaattctaccataatgttctatcataaaccatattt 22175342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 28090705 - 28090779
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||| ||| ||||||||| ||||||| ||||||||||||| |||| ||||||||||||| |||||  ||||||||    
T  28090705 caagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatattt 28090779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 30202141 - 30202290
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  30202141 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 30202239  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  30202240 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 30202290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 49347404 - 49347553
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  49347404 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 49347502  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  49347503 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 49347553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 19908046 - 19908134
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||| | |||| || |||||||||  |||||  |||||||| | |||||||||||    
T  19908046 caagccttatcccactaagtggggtcggctacatggataaaattacgcaataatgttcaatcataaaccatatttgaatccaactcatt 19908134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 25979242 - 25979330
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||  ||||||||   |||||||||||    
T  25979242 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcatt 25979330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 37311766 - 37311854
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||||||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||| |  ||||||||   |||||||||||    
T  37311766 caagccttttcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 37311854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 40568421 - 40568509
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||  ||||||||||||| |||| |||||| | |||| |||||  ||||||||  ||||||||||||    
T  40568421 caagccttatcccactaagtggggttggctacatggatcaaattacgccatagttttctatcataaaccatattttggtccaactcatt 40568509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 44941787 - 44941851
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||||| |||||| |||||    
T  44941787 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcata 44941851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 356
Target Start/End: Original strand, 3818867 - 3819009
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||  ||| ||||||||||||| ||   | ||||||||||  |||||  |||||||||  | ||||||||| ||| || |||    
T  3818867 caagccttatcccactaagtgcagtcggctacatggatcaaatggcgacataatgttccatcataaaccatatttctattcaactcatt-aatctctaaa 3818965  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctct 356  Q
    |||||| ||||||||||||| ||| |||||| |||||| |||||    
T  3818966 tctttcttaatagtttctcttatagtttttcaaggtcttcctct 3819009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 27704215 - 27704156
Alignment:
Q  220 ttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatac 279  Q
    ||||||||||||  |||||| ||||||||||||| |||| ||||||||||||| ||||||    
T  27704215 ttttcccactaagcggggtcggctacatggatcaaattacgccataatgttctatcatac 27704156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 350
Target Start/End: Complemental strand, 40416632 - 40416506
Alignment:
Q  224 cccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaa 323  Q
    |||||||| ||||||| |||| | |||||| ||||  |||||||||||| |||||  |||||||||  ||||||||| ||||| |  | ||||||| |||    
T  40416632 cccactaagtggggtcggctaaagggatcacattacaccataatgttctatcataaaccatatttcgatccaactca-ttaatctatagatctttcttaa 40416534  T
Q  324 tagtttctctgata-tttttctaggtct 350  Q
    |||||| ||| ||| |||||||||||||    
T  40416533 tagtttgtcttatagtttttctaggtct 40416506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 326
Target Start/End: Original strand, 52900682 - 52900764
Alignment:
Q  243 tacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatag 326  Q
    ||||||||||| |||  |||||| |||||| |||||  |||||||||||||||||||| ||||| || |||||| |||||||||    
T  52900682 tacatggatcaaattccgccatagtgttctatcataaaccatatttcagtccaactca-ttaatctctaaatctgtcctaatag 52900764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 21769722 - 21769780
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| || |||||| ||||||| ||||||||||||| |||| |||||||||||||    
T  21769722 caagccttatcacactaagtggggtcggctacatggatcaaattacgccataatgttct 21769780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 42337827 - 42337753
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||  ||||||||||||| || |||||||| |||||| |||||| ||| ||||    
T  42337827 caagccttatcccactaagtggggttggctacatggatcaaatgatgccatagtgttctatcatacaccaaattt 42337753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 1290043 - 1290116
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    ||||||| ||| ||| | ||||||| || |||||||||| |||||||||||||||||| |||||  ||||||||    
T  1290043 aagccttatccaactgagtggggtcggccacatggatcaaattatgccataatgttctatcataaaccatattt 1290116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 19908395 - 19908543
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||||| ||||||||||| | || || ||||  |||| | |||  |||||||| | ||||||||  ||||| || |||    
T  19908395 caagccttatcccactaagtggggtcaggtacatggatcaaactacgcaataagattctattataaaccatatttgaatccaactc-gttaatctctaaa 19908493  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    ||||| |||| | | ||||| | | ||||||||||||| |||||||||||    
T  19908494 tcttttctaacaatgtctcttaaagtttttctaggtctacctctgcctct 19908543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 29577523 - 29577458
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatac 279  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| ||||||    
T  29577523 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatac 29577458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 32112000 - 32112065
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatac 279  Q
    |||||||||||| ||||| |||| || ||||||| ||||| |||| ||||||||||||| ||||||    
T  32112000 caagccttttccaactaagtgggttcggctacattgatcaaattacgccataatgttctatcatac 32112065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 41165553 - 41165500
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataat 267  Q
    |||||||||||||||||| ||||||| ||||||||||||| || | ||||||||    
T  41165553 caagccttttcccactaagtggggtcggctacatggatcaaatgacgccataat 41165500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 2429640 - 2429704
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    ||||| || ||||||||| ||||||| ||||| ||||||| |||| ||||||||||||| |||||    
T  2429640 caagctttgtcccactaagtggggtcggctacgtggatcaaattacgccataatgttctatcata 2429704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 362
Target Start/End: Complemental strand, 6025867 - 6025728
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttccta 322  Q
    ||||||||| |||  || ||||||||||||| || | ||||| ||||||| ||| |  |||||||||  ||||||||| ||||| || | ||||||  ||    
T  6025867 tcccactaagtggaatcggctacatggatcaaatgacgccatcatgttctatcagataccatatttctatccaactca-ttaatctctagatctttttta 6025769  T
Q  323 atagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
     |||| ||||| ||| ||||||||||||| |||||||||||    
T  6025768 ctagtatctcttatagtttttctaggtcttcctctgcctct 6025728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 302
Target Start/End: Original strand, 32082768 - 32082856
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatatta-tgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    ||||||||||||||||| ||||||| ||||||||||||| || | |||| || |||||| ||| |  |||||||| | |||||||||||    
T  32082768 aagccttttcccactaagtggggtcggctacatggatcaaatgactgccgtagtgttctatcaaaaaccatatttgaatccaactcatt 32082856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 48801625 - 48801734
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| ||||||| |||| |||| |||||||||||||||| ||||||   ||||||||| |||||  ||||||||  |||||||||  |||||| |||||    
T  48801625 caagcattttcccgctaagtgggatcagctacatggatcaaattatg-tgtaatgttctatcataaaccatattt-ggtccaactc-gttaattcccaaa 48801721  T
Q  314 tctttcctaatag 326  Q
     ||||||||||||    
T  48801722 actttcctaatag 48801734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 51602327 - 51602239
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||  ||||||||||||| || | ||||| ||||||| |||||| ||| ||||   |||||||||||    
T  51602327 caagccttatcccactaagtggggttggctacatggatcaaatgacgccatgatgttctatcatacaccaaatttggatccaactcatt 51602239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 4318856 - 4318895
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatca 253  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  4318856 caagccttttcccactaagtggggtcggctacatggatca 4318895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 31274412 - 31274499
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcat 301  Q
    ||||| || ||||||||| ||||||||||||||  ||||| |||| ||||||| ||| | |||||  |||||||||| || |||||||    
T  31274412 caagcattatcccactaagtggggtcagctacacagatcaaattacgccataacgttatatcataaaccatatttcaatctaactcat 31274499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 365
Target Start/End: Original strand, 48431410 - 48431568
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcat------ttaatt 307  Q
    |||||||| ||| ||||| |||||||||||||| |||||| |||| ||||| ||||| | ||| |  ||||||||   ||||||||||      | |||     
T  48431410 caagccttatcctactaagtggggtcagctacaaggatcaaattaagccatgatgttttatcacaaaccatatttggatccaactcattattcataaatc 48431509  T
Q  308 tccaaatctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgt 365  Q
    || ||||||||| ||||||||||||| ||| ||||| | ||||| ||||| ||||||||    
T  48431510 tctaaatctttcttaatagtttctcttatagtttttttgggtcttcctctacctcttgt 48431568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 4415620 - 4415562
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||| ||||| ||||||| ||| ||| ||||||||||||| || |||||||||||||||    
T  4415620 caagtctttttccactaaatggagtcggctacatggatcaaatgatgccataatgttct 4415562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 363
Target Start/End: Complemental strand, 9509569 - 9509440
Alignment:
Q  234 ggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctct 333  Q
    |||||| ||||||||||||  |||| ||||||||||||  |||||  ||||||||   || |||||||| |   |  ||||||||||||||||||| |||    
T  9509569 ggggtcggctacatggatcgaattacgccataatgttcaatcataaaccatatttggctctaactcatt-aggctgtaaatctttcctaatagtttatct 9509471  T
Q  334 gata-tttttctaggtctgcctctgcctctt 363  Q
     ||| ||||||||||||| ||||| ||||||    
T  9509470 tatagtttttctaggtcttcctctacctctt 9509440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 34792360 - 34792509
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||| ||| ||||||| ||||||||||||| || | |||||| |||||| |||||  ||| ||||   ||||||||||| |  ||  |||    
T  34792360 caagccttatcccattaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattgacctt-taaa 34792458  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  34792459 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 34792509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 38877354 - 38877412
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| |||| || ||||||||||||| || | |||||||||||||    
T  38877354 caagccttatcccactaagtgggttcggctacatggatcaaatgacgccataatgttct 38877412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 39140786 - 39140728
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    ||||| || ||||||||| ||||||| |||||||| |||| |||| |||||||||||||    
T  39140786 caagcattatcccactaagtggggtcggctacatgaatcaaattacgccataatgttct 39140728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 39318399 - 39318251
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| |||||||||  ||| || ||||||||||||| |||| |||||| |||||| |||||  ||||||||   ||||||||| || |  || |||    
T  39318399 caagccttatcccactaagcggg-tcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactca-ttgacctctaaa 39318302  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  39318301 tcctttctaatggtttctcttatagttttcctaggtcttcctctacctctt 39318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 363
Target Start/End: Original strand, 40228112 - 40228166
Alignment:
Q  310 caaatctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    ||||||||||||||||||||| || ||| ||||||||||||| | ||||||||||    
T  40228112 caaatctttcctaatagtttcacttatagtttttctaggtcttcgtctgcctctt 40228166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 44751755 - 44751681
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| || |||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||    
T  44751755 caagccttatcccactaagtgaggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaattt 44751681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 52921351 - 52921277
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | || ||| |||||| |||||  ||||||||    
T  52921351 caagccttatcccactaagtggggtcggctacatggatcaaatgacgcaatagtgttctatcataaaccatattt 52921277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 2914134 - 2914191
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttc 271  Q
    |||||||| ||||||||| ||||||  ||||||||||||| | || ||||||||||||    
T  2914134 caagccttatcccactaagtggggttggctacatggatcaaagtacgccataatgttc 2914191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 8628205 - 8628152
Alignment:
Q  311 aaatctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    ||||||||||||||||||||| | ||| ||||||||||||| ||||| ||||||    
T  8628205 aaatctttcctaatagtttctgttatagtttttctaggtcttcctctacctctt 8628152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 50257840 - 50257767
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    ||||||| || |||||| ||||||  ||||||||||||| ||||  |||||||||||| |||||  ||||||||    
T  50257840 aagccttatctcactaagtggggttggctacatggatcaaattacaccataatgttctatcataaaccatattt 50257767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 4001466 - 4001554
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||||||||||||| ||||||  ||||||||||||| || ||| ||||  ||||| ||| |  ||||||||   |||||||||||    
T  4001466 caagccttttcccactaagtggggttggctacatggatcaaatgatgtcatagggttctatcaaaaaccatatttggatccaactcatt 4001554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 6084246 - 6084158
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| || | |||  ||||||||||| |||| |||||| |||||| |||||  ||||||||   |||||||||||    
T  6084246 caagccttatcccactaagtgagatcaaatacatggatcaaattacgccatattgttctatcataaaccatattttgatccaactcatt 6084158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 9593005 - 9592917
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||| ||| ||||||| ||||||||||||| || | || ||| |||||| |||||| ||| |||| | || ||||||||    
T  9593005 caagccttatcccattaagtggggtcggctacatggatcaaatgacgctatagtgttctatcatacaccaaatttaaatctaactcatt 9592917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 22090367 - 22090279
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||| | ||||||| ||||||||||||| || | | |||| |||||| |||||| ||| ||||   |||||||||||    
T  22090367 caagccttatcccacttagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcatt 22090279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 34444627 - 34444539
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||| ||||| ||||  |||||||||| | | |||  ||||||||   |||||||||||    
T  34444627 caagccttatcccactaagtggggtcggctacatagatcaaattacaccataatgttttattataaaccatatttggatccaactcatt 34444539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 42539223 - 42539267
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatatta 258  Q
    |||||||||||||||||| |||||||  |||||||||||| ||||    
T  42539223 caagccttttcccactaagtggggtcgtctacatggatcaaatta 42539267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 43481809 - 43481853
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatatta 258  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||    
T  43481809 caagccttatcccactaagtggggtcggctacatggatcaaatta 43481853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 371
Target Start/End: Complemental strand, 53540561 - 53540404
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||| ||| ||||||| | ||||||  |||| |||||||| |||||||||||||||||| |||||  ||||||||  |||||||||| ||||| |||||     
T  53540561 caagtcttatcccactcagtggggttggctatatggatcaaattatgccataatgttctatcataaaccatatttttgtccaactca-ttaatctccaag 53540463  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctg 371  Q
    |||||||||||||||| ||| ||| ||||||||||||| ||||||||||| ||| ||||    
T  53540462 tctttcctaatagtttatcttatagtttttctaggtcttcctctgcctctagtgatctg 53540404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 266 - 362
Target Start/End: Original strand, 21945701 - 21945797
Alignment:
Q  266 atgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    ||||||| |||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||    
T  21945701 atgttctatcataaaccatatttcagtccaactcatt-aatttccaaatctttcctaatagtttctatgatagtttttctaggtcttcctcagcctct 21945797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 371
Target Start/End: Original strand, 13805276 - 13805433
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||| | ||||||||| ||||||  ||||||||||||| ||||| |||||||||||| |||||  ||||||||| |||||||| | ||| | || |||    
T  13805276 caagccatatcccactaagtggggttggctacatggatcaaattatcccataatgttctatcataaaccatatttccgtccaactta-ttactctcaaaa 13805374  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctg 371  Q
    |||||| | ||||||||||| ||| ||||||||||| | ||||||||||| ||| ||||    
T  13805375 tctttcttcatagtttctcttatagtttttctaggttttcctctgcctctagtgatctg 13805433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 346
Target Start/End: Original strand, 56439583 - 56439714
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    |||||||||| |||||| ||||||  |||| |||||| | |||| || |||||||||| |||||  |||||||||  ||||||| ||| |||||||||||    
T  56439583 aagccttttcgcactaagtggggttggctatatggattaaattacgctataatgttctatcataaaccatatttcgatccaactaatt-aatttccaaat 56439681  T
Q  315 ctttcctaatagtttctctgata-tttttctag 346  Q
    ||||| ||||||||||||||||| |||||||||    
T  56439682 ctttcataatagtttctctgatagtttttctag 56439714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 325
Target Start/End: Complemental strand, 55008017 - 55007907
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| | ||||||| ||| |||||  ||||||||| |||||||||| ||||| || |||    
T  55008017 caagccttatcccactaagtggggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactca-ttaatctctaaa 55007919  T
Q  314 tctttcctaata 325  Q
    |||||| |||||    
T  55007918 tctttcttaata 55007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 29399075 - 29398990
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactc 299  Q
    |||||||||||||||||| |||||||||||||||| |||| |||| ||||||||||||| |||||  || ||||||  ||||||||    
T  29399075 caagccttttcccactaagtggggtcagctacatgaatcaaattacgccataatgttctatcataaaccttatttcgttccaactc 29398990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 360
Target Start/End: Complemental strand, 37488362 - 37488216
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| |||||   ||||||||||||| |||| ||||||||| ||| ||||   ||||||||   || |||| | |||||||| | |    
T  37488362 caagccttatcccactaagtggggctggctacatggatcaaattacgccataatgctctatcattaaccatattttgatcaaactta-ttaatttctaga 37488264  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcct 360  Q
    |||||| ||||||||||||| ||| ||||||||||||| |||||||||    
T  37488263 tctttcttaatagtttctcttatagtttttctaggtctacctctgcct 37488216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 25575095 - 25574982
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||  ||| |||||||| |||||  |||||||||  ||||||||| ||||| || | |    
T  25575095 caagccttatcccactaaatggggtctgctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactca-ttaatctctaga 25574997  T
Q  314 tctttcctaatagtt 328  Q
    |||||| ||||||||    
T  25574996 tctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 26037520 - 26037665
Alignment:
Q  218 ccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctt 317  Q
    |||| ||||||||| ||||||| ||||||||||||  |||| |||||| |||||| |||||  ||||||||   ||||||||||| |  | | |||||||    
T  26037520 ccttatcccactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcattcacct-ctaaatctt 26037618  T
Q  318 tcctaatagtttctctgat-atttttctaggtctgcctctgcctctt 363  Q
    |||||||||||||||| ||  |||| |||||| | ||||||||||||    
T  26037619 tcctaatagtttctcttatggttttcctaggttttcctctgcctctt 26037665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 31959825 - 31959974
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||||| |  | | |||    
T  31959825 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacct-ctaaa 31959923  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || |||||||||||||| ||| |||| |||||||| ||||| ||||||    
T  31959924 tcctttctaatagtttctctaatagttttcctaggtcttcctctacctctt 31959974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 39100547 - 39100696
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||| |||||| ||||||||||||| | |||  | ||||||   ||||||||| || |  ||||||    
T  39100547 caagccttatcccactaagtggggtcggctacatggattatattacgccataatgttctatgataaacaatatttggatccaactca-ttgacctccaaa 39100645  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  39100646 tcctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 39100696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 350
Target Start/End: Original strand, 23906308 - 23906444
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||||||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  23906308 caagccttatcccactaagtggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 23906406  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtct 350  Q
    || || ||||| |||||||| ||| |||||||||||||    
T  23906407 tcctttctaatggtttctctaatagtttttctaggtct 23906444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 51438716 - 51438628
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| |||||| || | ||||||||||||||||||| |||| ||||||||||| | | |||  |||||||||| |||||||||||    
T  51438716 caagccttatcccacaaagttgggtcagctacatggatcaaattacgccataatgttatattataaaccatatttcattccaactcatt 51438628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 333
Target Start/End: Complemental strand, 31043331 - 31043225
Alignment:
Q  226 cactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaata 325  Q
    |||||| ||||||||||| || |||||| ||||||| ||| |||||| ||| |  ||||||||   ||||||||| ||||| || |||||||||||||||    
T  31043331 cactaagtggggtcagctgcaaggatcaaattatgcaatagtgttctatcacaaaccatatttggatccaactca-ttaatctctaaatctttcctaata 31043233  T
Q  326 gtttctct 333  Q
    ||||||||    
T  31043232 gtttctct 31043225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 372
Target Start/End: Original strand, 45204851 - 45205008
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| | ||||  ||||||| ||||| |||| ||| ||||||||| |||||  ||||||||   ||||||| ||| || | | |||    
T  45204851 caagccttatcccactaagttgggtgggctacatagatcaaattacgcc-taatgttctatcataaaccatatttggatccaacttattaaact-ctaaa 45204948  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctcttgtggtctgc 372  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||  |||||| || |||||    
T  45204949 tctttcctaatagtttctcttatagtttttctaggtcttcctccacctcttttgatctgc 45205008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 436500 - 436426
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || |||||||| |||||| |||||| ||| ||||    
T  436500 caagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaattt 436426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 1777028 - 1777177
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||| ||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  1777028 caagccttatcccattaagtggggtcggctacatggatcaaatgacgccatactgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 1777126  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    ||||| ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  1777127 tcttttctaatggtttctctaatagttttcctaggtcttcctctacctctt 1777177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 30621241 - 30621330
Alignment:
Q  243 tacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctct 333  Q
    |||||||||||  ||| ||||||||||||| |||||  ||||||||| ||||||| || ||||| || ||||||||| |||||||||||||    
T  30621241 tacatggatcaagttaagccataatgttctatcataaaccatatttcggtccaacaca-ttaatctctaaatctttcttaatagtttctct 30621330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 35690542 - 35690393
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||| ||| ||||||||| ||||||| ||||||||||||| |||| ||||||||||||| |||||  || |  ||   || |||||| ||||  || |||    
T  35690542 caagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccctgattggatcaaactca-ttaacctctaaa 35690444  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    | |||| ||||||||||||| ||| ||||||||||||| ||||| ||||||    
T  35690443 tttttcgtaatagtttctcttatagtttttctaggtcttcctctacctctt 35690393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 48174104 - 48174253
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | ||||||||||| | |||||| ||| ||||   ||||||||| || |  || |||    
T  48174104 caagccttatcccactaagtggggtctgctacatggatcaaatgacgccataatgttttatcatacaccaaatttggatccaactca-ttgacctctaaa 48174202  T
Q  314 tctttcctaatagtttctctgatatttttc-taggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| ||||| ||||||| ||||| ||||||    
T  48174203 tcctttctaatggtttctctaatagttttcttaggtcttcctctacctctt 48174253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 363
Target Start/End: Complemental strand, 4441123 - 4440975
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    ||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || ||||    
T  4441123 aagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaat 4441025  T
Q  315 ctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    | || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  4441024 cctttctaatggtttctctaatagttttcctaggtcttcctctacctctt 4440975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 363
Target Start/End: Original strand, 53518344 - 53518483
Alignment:
Q  223 tcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttccta 322  Q
    ||||||||| ||||||| ||| ||||||||| |||| |||||| |||||| |||||  ||||||||   ||||||||| ||||  || ||||||||||||    
T  53518344 tcccactaagtggggtc-gctgcatggatcaaattacgccatagtgttctatcataaaccatatttagatccaactca-ttaacctctaaatctttccta 53518441  T
Q  323 atagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
     |||||| ||| ||| |||||||||| || ||||| ||||||    
T  53518442 ttagtttttctcatagtttttctaggccttcctctacctctt 53518483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 12443366 - 12443290
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttca 290  Q
    |||||||| ||| || | ||||| || ||||||||||||| |||||||||||||||||| |||||  ||||||||||    
T  12443366 caagccttatcctacgatttgggatcggctacatggatcaaattatgccataatgttctatcataaaccatatttca 12443290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 52569526 - 52569614
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||   |||||||||||    
T  52569526 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 52569614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 13296704 - 13296586
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    ||||| |||||||||||| || |||| ||| |||| |||| |||| || ||||||||    ||||| || |||||| |||||||||| ||||||||||||    
T  13296704 caagcattttcccactaagtgaggtcggctgcatgcatcaaattacgctataatgtttaaccatacaccgtatttcggtccaactca-ttaatttccaaa 13296606  T
Q  314 tctttcctaatagtttctct 333  Q
    ||||  |||||||| |||||    
T  13296605 tcttgtctaatagtatctct 13296586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 329
Target Start/End: Complemental strand, 31459265 - 31459151
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||| | |||||||||||  ||  ||||||||||||  ||| || |||||||    ||||||||| ||||| || |||    
T  31459265 caagccttatcccactaagtggggtcgggtacatggatcaagttccgccataatgttcaatcacacaccatattgggatccaactca-ttaatctctaaa 31459167  T
Q  314 tctttcctaatagttt 329  Q
    ||||||||||||||||    
T  31459166 tctttcctaatagttt 31459151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 36255533 - 36255596
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcat 277  Q
    |||||||||||||||||| ||||||| || |||||||||| ||||  |||||||||||| ||||    
T  36255533 caagccttttcccactaagtggggtcggccacatggatcaaattacaccataatgttctatcat 36255596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 26024861 - 26024978
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| || |||| ||||||||||| | ||||  |||||||||||| |||||  |||| | ||  ||||||||| ||||| || | |    
T  26024861 caagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactca-ttaatctctaga 26024959  T
Q  314 tctttcctaatagtttctc 332  Q
    |||||| ||||||||||||    
T  26024960 tctttcttaatagtttctc 26024978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 51176845 - 51176787
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||||  ||||||| || |||| ||||||||||||| ||||||||||||||||||    
T  51176845 caagcctttcaccactaagtgtggtccgctacatggatcaaattatgccataatgttct 51176787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 15665372 - 15665319
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataat 267  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||    
T  15665372 caagccttatcccactaagtggggtcagctacatggatcaaattacgccgtaat 15665319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 362
Target Start/End: Complemental strand, 49987675 - 49987531
Alignment:
Q  218 ccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctt 317  Q
    |||| ||| ||||| |||||||| ||| | |||| | |||| ||||||||| ||| ||||   ||||| ||   |||| |||||||| | ||||| ||||    
T  49987675 ccttatccaactaagtggggtcaactagaaggataaaattacgccataatgctctatcatgaaccatagttggatccatctcattta-tctccaagtctt 49987577  T
Q  318 tcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    || ||||||||||||| ||| ||||||||||||| |||||||||||    
T  49987576 tcttaatagtttctcttatagtttttctaggtcttcctctgcctct 49987531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 5306567 - 5306479
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| |||||| || |||||| ||||| |||||||| |||| ||||||||||| | |||||  ||||||||   |||||||||||    
T  5306567 caagccttatcccaccaagtggggttagctatatggatcaaattacgccataatgttatgtcataaaccatatttggatccaactcatt 5306479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 15661887 - 15661939
Alignment:
Q  218 ccttttcccactaattggggtcagctacatggatcatattatgccataatgtt 270  Q
    |||| ||||||||| ||||||| ||||||||||||| |||| |||||||||||    
T  15661887 ccttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 15661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 19154874 - 19154962
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||||||| ||||||||| || | |||||| |||||| |||||  ||| ||||   |||||||||||    
T  19154874 caagccttatcccactaagtggggtcagctgcatggatcaaataacgccatagtgttctatcataaaccaaatttggatccaactcatt 19154962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 20105556 - 20105616
Alignment:
Q  241 gctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcat 301  Q
    ||||||||||||| || | |||||||||| || |||||  |||||||||||||||||||||    
T  20105556 gctacatggatcaaatgacgccataatgtcctatcatataccatatttcagtccaactcat 20105616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 28467703 - 28467651
Alignment:
Q  220 ttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    ||||||||||||  |||||| ||||||||||||| |||| |||||||||||||    
T  28467703 ttttcccactaagcggggtccgctacatggatcaaattacgccataatgttct 28467651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 32479309 - 32479221
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||||| ||||||| ||||||| ||||||||||||| || | |||||| |||||| ||| |  ||||||||   |||||||||||    
T  32479309 caagcctttttccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatattttgatccaactcatt 32479221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 45209216 - 45209280
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||||| ||||||||||||| | || |||||||| |||| |||||    
T  45209216 caagccttatcccactaagtggggtcggctacatggatcaaactacgccataatattctatcata 45209280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 55388222 - 55388333
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| |||||||  | |||||||||| ||||  ||| |||||||| |||||   ||||||||  || |||||||| ||| ||||||    
T  55388222 caagccttatcccactaagtggggtcgacaacatggatcaaattacaccacaatgttctatcataaatcatatttcgatctaactcatt-aatctccaaa 55388320  T
Q  314 tctttcctaatag 326  Q
    |||||| ||||||    
T  55388321 tctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 1095716 - 1095633
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaac 297  Q
    |||||||| |||||||||  |||||| | ||||| ||||| || | ||||||||||||| |||||  |||||||||| ||||||    
T  1095716 caagccttatcccactaaacggggtcgggtacatcgatcaaataacgccataatgttctatcataaaccatatttcaatccaac 1095633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 19061946 - 19062017
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccata 285  Q
    |||||||| ||||||||  ||||||| ||||||||||||| || | |||||| |||||| |||||| |||||    
T  19061946 caagccttatcccactaggtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccata 19062017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 2557682 - 2557831
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgcc-ataatgttctttcatacgccatatttcagtccaactcatttaatttccaa 312  Q
    |||||||| ||||||||| ||| ||  ||||||||||||| ||||  || |||||||||| |||||  |||||||||  ||||||||  ||||| | ||     
T  2557682 caagccttatcccactaaatggagttggctacatggatcaaattacaccaataatgttctatcataaaccatatttcgatccaactc-gttaatcttcag 2557780  T
Q  313 atctttcctaatagtttctctgata-tttttctaggtctgcctctgcctct 362  Q
    ||| ||| ||||||||||||| | | ||||||||| ||| ||||| |||||    
T  2557781 atccttcttaatagtttctcttacagtttttctagatcttcctctacctct 2557831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 330
Target Start/End: Complemental strand, 20863876 - 20863795
Alignment:
Q  248 ggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttc 330  Q
    |||||| |||| |||||||| |||| |||| | ||||||||| |||||||||| |||| | ||||||| || |||||||||||    
T  20863876 ggatcaaattacgccataatattctatcattcaccatatttcggtccaactca-ttaaataccaaatcatttctaatagtttc 20863795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 27450191 - 27450249
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| ||||||    
T  27450191 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttct 27450249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 30634117 - 30634167
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccat 264  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |||| |||||    
T  30634117 caagccttatcccactaagtggggtcggctacatggatcaaattacgccat 30634167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 39708704 - 39708555
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||| ||| ||||||||| |||||||  |||||||||||| |||| | |||| |||||| |||||  ||||||||   ||||||||| || |  || |||    
T  39708704 caagtcttatcccactaagtggggtcgactacatggatcaaattacgacatagtgttctatcataaaccatatttggatccaactca-ttgacctctaaa 39708606  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    || || ||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  39708605 tcctttctaatggtttctcttatagttttcctaggtcttcctctacctctt 39708555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 48622554 - 48622628
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||| | || | |||||| |||||| |||||| ||| ||||    
T  48622554 caagccttatcccactaagtggggtcggctacatggattaaatgacgccatagtgttctatcatacaccaaattt 48622628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 302
Target Start/End: Complemental strand, 34379670 - 34379586
Alignment:
Q  217 gccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    ||||||||| || || ||||||| |||||||| ||||  ||| |||||||| |||| |||||  ||||||||| ||||||||||||    
T  34379670 gccttttccaacaaagtggggtcggctacatg-atcaagttacgccataatattctatcataaaccatatttcggtccaactcatt 34379586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 50967050 - 50967127
Alignment:
Q  225 ccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    ||||||| || |||| ||||||||||||| |||| | |||||| ||||||||||  ||||| | || |||||||||||    
T  50967050 ccactaagtgaggtcggctacatggatcaaattacgacataattttctttcatataccatactgcattccaactcatt 50967127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 7947208 - 7947164
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatatta 258  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||    
T  7947208 caagccttatcccactaagtggggtcggctacatggatcaaatta 7947164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 12494934 - 12494846
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||| | || | | |||| |||||| |||||| ||| ||||   |||||||||||    
T  12494934 caagccttatcccactaagtggggtccgctacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcatt 12494846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 350
Target Start/End: Complemental strand, 21107238 - 21107127
Alignment:
Q  239 cagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctgata- 337  Q
    ||||||||| ||||| | || ||||||| ||||| |||||  ||||||||   ||||||| ||| |||  | ||| ||||||||||||||||||| |||     
T  21107238 cagctacatagatcaaactaagccataaagttctatcataaaccatatttggatccaactaatt-aatcactaaaactttcctaatagtttctcttatag 21107140  T
Q  338 tttttctaggtct 350  Q
    |||||||||||||    
T  21107139 tttttctaggtct 21107127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 21359237 - 21359293
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttc 271  Q
    ||||||| ||||||||| ||||||| ||| |||| |||| |||| ||||||||||||    
T  21359237 aagccttatcccactaagtggggtcggctgcatgaatcaaattacgccataatgttc 21359293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 21528559 - 21528471
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||    ||||| |||||| ||| |  |||||||| | |||||||||||    
T  21528559 caagccttatcccactaagtggggtcggctacatggatcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaactcatt 21528471  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 26275027 - 26275079
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataa 266  Q
    |||||||||||| ||||| ||||||| | ||||||||||| |||| |||||||    
T  26275027 caagccttttccaactaaatggggtcggatacatggatcaaattaggccataa 26275079  T

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Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 34585753 - 34585697
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgtt 270  Q
    |||||||| ||||||||| |||| | |||||||||||||| || | |||||||||||    
T  34585753 caagccttatcccactaagtgggttaagctacatggatcaaatgacgccataatgtt 34585697  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 38903828 - 38903876
Alignment:
Q  314 tctttcctaatagtttctctgatatttttctaggtctgcctctgcctct 362  Q
    |||||| ||||||||||||| ||| |||||||||||| | |||||||||    
T  38903828 tctttcttaatagtttctcttatagttttctaggtcttcatctgcctct 38903876  T

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Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 46715278 - 46715330
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataa 266  Q
    |||| ||| ||||||||| ||||||||| ||||||||||  ||||||||||||    
T  46715278 caagtcttatcccactaagtggggtcagttacatggatcgaattatgccataa 46715330  T

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Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 49738561 - 49738625
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcata 278  Q
    |||||||| ||||||||| ||||||| ||||||||||||| |    ||||||||||||| |||||    
T  49738561 caagccttatcccactaaatggggtcggctacatggatcaaacaccgccataatgttctgtcata 49738625  T

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Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 49939747 - 49939803
Alignment:
Q  216 agccttttcccactaattggggtcagctacatggatcatattatgccataatgttct 272  Q
    |||||| ||||||||| ||||||| ||||||||||||| || | |||||| ||||||    
T  49939747 agccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttct 49939803  T

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Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 50862902 - 50862858
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatatta 258  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||    
T  50862902 caagccttatcccactaagtggggtcggctacatggatcaaatta 50862858  T

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Target: scaffold0010 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 160335 - 160453
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||||||||||||| ||||||  ||||||||  ||| |||| ||||||||||||| |||||  ||||||||| ||| |||||| ||||||||  ||    
T  160335 caagccttttcccactaagtggggttggctacatgattcaaattacgccataatgttctatcataaaccatatttcggtcgaactca-ttaatttcttaa 160433  T
Q  314 tctttcctaatagtttctct 333  Q
    ||||||||||||||||||||    
T  160434 tctttcctaatagtttctct 160453  T

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Target: scaffold0050 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 362
Target Start/End: Original strand, 58238 - 58385
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaat 314  Q
    ||||||| ||||||||| | ||||| ||||||||||||| |||| | ||||||||||| |||||  |||||| |  |||||||||| || || ||||| |    
T  58238 aagccttatcccactaagttgggtcggctacatggatcaaattacgacataatgttctatcataaaccatatcttggtccaactca-ttgatctccaagt 58336  T
Q  315 ctttcctaatagtttctctgat-atttttctaggtctgcctctgcctct 362  Q
     |||||||| ||||||||| ||  ||||||||||||| |||||||||||    
T  58337 ttttcctaacagtttctcttatcgtttttctaggtcttcctctgcctct 58385  T

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Target: scaffold0050; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 45477 - 45588
Alignment:
Q  236 ggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaatctttcctaatagtttctctga 335  Q
    |||| ||||||||||||| |||| || ||||||||||  | |||  ||||| || ||| |||||||| ||||||| |||||||| |||||||||||||||    
T  45477 ggtcggctacatggatcaaattacgctataatgttctaacgtacatcatatctcggtctaactcatt-aatttccgaatctttcttaatagtttctctga 45575  T
Q  336 tatttttctaggt 348  Q
    || ||||||||||    
T  45576 tagttttctaggt 45588  T

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Target: scaffold0570 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 959 - 1108
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||||| ||||||||| ||||||||||||||||||||| || | |||||| |||||| |||||| ||| ||||   ||||||||| || |  || |||    
T  959 caagccttatcccactaaatggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactca-ttgacctctaaa 1057  T
Q  314 tctttcctaatagtttctctgata-tttttctaggtctgcctctgcctctt 363  Q
    |||||  |||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  1058 tcttttttaatggtttctctaatagttttcctaggtcttcctctacctctt 1108  T

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Target: scaffold0392 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 6783 - 6858
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttc 289  Q
    |||||||| ||||||||| ||||||  ||||||||||||| |||||||||||||||| | |||||  |||||||||    
T  6783 caagccttatcccactaagtggggttggctacatggatcaaattatgccataatgttatatcatataccatatttc 6858  T

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Target: scaffold1318 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 602 - 514
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||  || |||||||||    
T  602 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttgggtacaactcatt 514  T

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Target: scaffold0491 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 3839 - 3986
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatttaatttccaaa 313  Q
    |||||| | |||||||||||||||||  |||||| ||||| |||| ||| ||||||||  |||||  |||||||| | ||||||||| ||||| |    |    
T  3839 caagccatatcccactaattggggtcgactacattgatcaaattaagccttaatgttcaatcataaaccatattttaatccaactca-ttaatctaatga 3937  T
Q  314 tctttcctaatagtttctctgatatttttctaggtctgcctctgcctct 362  Q
    | ||||  |||||||||||| ||| |||| ||||||| |||||||||||    
T  3938 tttttctaaatagtttctcttatagttttttaggtctacctctgcctct 3986  T

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Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 28900 - 28974
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    |||||||| ||||||||| ||||||| ||||||||||||| || | |||||| |||||| |||||| ||| ||||    
T  28900 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaattt 28974  T

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Target: scaffold0245 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 16448 - 16521
Alignment:
Q  215 aagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    ||||||| ||| ||| | ||||||| || |||||||||| |||||||||||||||||| |||||  ||||||||    
T  16448 aagccttatccaactgagtggggtcggccacatggatcaaattatgccataatgttctatcataaaccatattt 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 48140 - 48201
Alignment:
Q  227 actaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatattt 288  Q
    ||||| ||| ||| ||||||||||||| |||| |||||||| |||| |||||| ||||||||    
T  48140 actaagtggagtcggctacatggatcaaattacgccataatattctatcatacaccatattt 48201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 43540 - 43588
Alignment:
Q  281 ccatatttcagtccaactcatttaatttccaaatctttcctaatagtttc 330  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  43540 ccatatttcagttcaacacatt-aatttctaaatctttcctaatagtttc 43588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 25543 - 25631
Alignment:
Q  214 caagccttttcccactaattggggtcagctacatggatcatattatgccataatgttctttcatacgccatatttcagtccaactcatt 302  Q
    |||||||| ||||||||| ||||||| ||||||||||| | || | | |||| |||||| |||||| ||| ||||   |||||||||||    
T  25543 caagccttatcccactaagtggggtccgctacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcatt 25631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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