View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11702_high_11 (Length: 361)

Name: NF11702_high_11
Description: NF11702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11702_high_11
NF11702_high_11
[»] chr8 (39 HSPs)
chr8 (259-347)||(32233105-32233193)
chr8 (19-78)||(2800077-2800136)
chr8 (22-78)||(35253802-35253858)
chr8 (19-78)||(31129360-31129419)
chr8 (23-78)||(1588829-1588884)
chr8 (19-78)||(2696591-2696650)
chr8 (23-78)||(10292414-10292469)
chr8 (94-187)||(32232880-32232962)
chr8 (19-78)||(38790550-38790609)
chr8 (22-78)||(35301141-35301197)
chr8 (19-78)||(7314791-7314850)
chr8 (21-78)||(10310342-10310399)
chr8 (32-78)||(18009693-18009739)
chr8 (19-69)||(43508435-43508485)
chr8 (19-78)||(22426459-22426518)
chr8 (22-78)||(39165041-39165098)
chr8 (19-78)||(171285-171344)
chr8 (19-78)||(5323980-5324039)
chr8 (19-78)||(23239182-23239241)
chr8 (19-78)||(14010750-14010809)
chr8 (191-222)||(32233031-32233062)
chr8 (19-78)||(1360111-1360171)
chr8 (29-78)||(8402285-8402335)
chr8 (19-57)||(17855707-17855745)
chr8 (21-78)||(36359696-36359753)
chr8 (24-78)||(39258643-39258697)
chr8 (26-78)||(7649593-7649645)
chr8 (23-67)||(10557457-10557502)
chr8 (25-78)||(14352792-14352845)
chr8 (21-78)||(42762010-42762065)
chr8 (22-78)||(43468683-43468739)
chr8 (19-78)||(4798519-4798578)
chr8 (19-78)||(10970324-10970383)
chr8 (19-59)||(19957318-19957358)
chr8 (23-78)||(24074568-24074623)
chr8 (19-78)||(25689366-25689425)
chr8 (28-60)||(36815460-36815492)
chr8 (21-78)||(39172189-39172248)
chr8 (19-59)||(45536776-45536816)
[»] chr4 (47 HSPs)
chr4 (19-78)||(8690272-8690331)
chr4 (19-78)||(9693020-9693079)
chr4 (19-78)||(14149851-14149910)
chr4 (19-78)||(28520709-28520768)
chr4 (19-78)||(48968188-48968247)
chr4 (19-78)||(53815754-53815813)
chr4 (19-78)||(36954195-36954254)
chr4 (19-78)||(52031265-52031324)
chr4 (25-78)||(15640421-15640474)
chr4 (19-74)||(46799465-46799520)
chr4 (19-78)||(53354944-53355003)
chr4 (19-78)||(42411431-42411491)
chr4 (19-78)||(40150531-40150590)
chr4 (22-78)||(52330887-52330943)
chr4 (19-73)||(36257752-36257806)
chr4 (25-78)||(56546427-56546480)
chr4 (25-78)||(5909761-5909814)
chr4 (19-72)||(7768772-7768825)
chr4 (34-78)||(46799569-46799613)
chr4 (26-78)||(48501636-48501688)
chr4 (35-78)||(27296896-27296939)
chr4 (25-75)||(26708534-26708583)
chr4 (21-78)||(31578077-31578134)
chr4 (20-72)||(30616059-30616111)
chr4 (22-78)||(31156198-31156254)
chr4 (19-73)||(37889587-37889643)
chr4 (19-78)||(20753103-20753162)
chr4 (19-78)||(30152172-30152231)
chr4 (19-78)||(30295571-30295630)
chr4 (19-78)||(30324473-30324532)
chr4 (23-73)||(46206650-46206701)
chr4 (19-78)||(11491195-11491256)
chr4 (19-78)||(36993099-36993160)
chr4 (19-78)||(37574330-37574391)
chr4 (19-78)||(50815765-50815826)
chr4 (19-75)||(3465641-3465697)
chr4 (19-75)||(11872931-11872988)
chr4 (22-78)||(41003150-41003206)
chr4 (22-78)||(43143781-43143837)
chr4 (21-77)||(44074913-44074969)
chr4 (23-75)||(56314823-56314875)
chr4 (19-78)||(10098183-10098242)
chr4 (19-78)||(17859836-17859895)
chr4 (19-74)||(28221289-28221344)
chr4 (19-78)||(29269293-29269352)
chr4 (19-66)||(34773673-34773720)
chr4 (19-78)||(41943965-41944024)
[»] chr3 (43 HSPs)
chr3 (19-78)||(27183659-27183718)
chr3 (19-78)||(9625041-9625100)
chr3 (19-78)||(10959191-10959250)
chr3 (19-78)||(24559447-24559506)
chr3 (19-78)||(36476417-36476476)
chr3 (19-78)||(52030179-52030238)
chr3 (19-78)||(24136728-24136789)
chr3 (27-77)||(32453502-32453552)
chr3 (19-75)||(14868743-14868799)
chr3 (23-75)||(42823966-42824018)
chr3 (19-78)||(7448341-7448400)
chr3 (19-78)||(7456483-7456542)
chr3 (19-78)||(36331704-36331763)
chr3 (26-78)||(38555006-38555058)
chr3 (19-78)||(3784128-3784187)
chr3 (19-78)||(33206815-33206874)
chr3 (19-78)||(34344756-34344815)
chr3 (19-78)||(46328902-46328961)
chr3 (23-78)||(50724429-50724484)
chr3 (23-78)||(50788364-50788419)
chr3 (19-77)||(3955366-3955424)
chr3 (20-78)||(8930953-8931013)
chr3 (21-78)||(36763491-36763551)
chr3 (21-78)||(44671529-44671586)
chr3 (29-73)||(45118711-45118756)
chr3 (19-78)||(14417926-14417985)
chr3 (21-65)||(28226178-28226222)
chr3 (21-77)||(35140779-35140835)
chr3 (30-78)||(44976642-44976690)
chr3 (19-78)||(47191431-47191490)
chr3 (19-78)||(27394565-27394626)
chr3 (21-75)||(35483329-35483383)
chr3 (19-73)||(40160793-40160849)
chr3 (21-68)||(41460336-41460385)
chr3 (25-78)||(43566774-43566827)
chr3 (26-60)||(43598863-43598897)
chr3 (19-78)||(47864694-47864755)
chr3 (26-59)||(31419648-31419681)
chr3 (19-73)||(45431685-45431741)
chr3 (19-67)||(49146142-49146190)
chr3 (19-78)||(42832040-42832099)
chr3 (19-78)||(43774243-43774302)
chr3 (19-59)||(49429518-49429558)
[»] chr6 (25 HSPs)
chr6 (19-77)||(29284176-29284234)
chr6 (19-78)||(14981680-14981739)
chr6 (19-72)||(33628925-33628978)
chr6 (19-78)||(9064924-9064983)
chr6 (19-78)||(11636744-11636803)
chr6 (19-77)||(24470370-24470428)
chr6 (19-78)||(6658521-6658580)
chr6 (19-66)||(6144022-6144069)
chr6 (19-78)||(25020506-25020565)
chr6 (19-78)||(12089155-12089214)
chr6 (22-66)||(21507192-21507235)
chr6 (24-78)||(18904661-18904715)
chr6 (25-78)||(5134412-5134465)
chr6 (19-78)||(6228236-6228297)
chr6 (21-78)||(10424513-10424570)
chr6 (19-78)||(18903343-18903404)
chr6 (19-78)||(2970247-2970306)
chr6 (19-78)||(3448410-3448469)
chr6 (19-78)||(9491713-9491772)
chr6 (19-78)||(10377102-10377161)
chr6 (19-78)||(12127887-12127946)
chr6 (21-78)||(15869040-15869099)
chr6 (26-78)||(18991420-18991471)
chr6 (19-78)||(30566116-30566175)
chr6 (22-58)||(32344700-32344736)
[»] chr1 (46 HSPs)
chr1 (20-78)||(40678882-40678940)
chr1 (21-78)||(13870059-13870116)
chr1 (19-72)||(17350119-17350172)
chr1 (22-74)||(17954841-17954893)
chr1 (19-75)||(19976533-19976589)
chr1 (19-78)||(25819243-25819302)
chr1 (19-78)||(39238774-39238833)
chr1 (23-78)||(47763363-47763418)
chr1 (19-77)||(52833085-52833143)
chr1 (19-72)||(29491528-29491580)
chr1 (26-78)||(35111714-35111766)
chr1 (19-78)||(38021310-38021369)
chr1 (38-78)||(2044942-2044982)
chr1 (22-78)||(29106846-29106902)
chr1 (19-78)||(32635198-32635258)
chr1 (19-78)||(12553252-12553313)
chr1 (19-78)||(15368863-15368922)
chr1 (19-78)||(32660888-32660948)
chr1 (19-78)||(38019925-38019984)
chr1 (31-73)||(12675726-12675768)
chr1 (19-78)||(23368708-23368769)
chr1 (19-78)||(49620030-49620091)
chr1 (19-78)||(3532952-3533011)
chr1 (19-78)||(11405514-11405573)
chr1 (19-78)||(15774290-15774349)
chr1 (33-65)||(19516479-19516511)
chr1 (19-78)||(19793584-19793643)
chr1 (19-78)||(35593821-35593880)
chr1 (19-78)||(37733813-37733872)
chr1 (19-59)||(42946464-42946504)
chr1 (19-78)||(50859345-50859404)
chr1 (23-77)||(4354084-4354138)
chr1 (19-78)||(32585406-32585465)
chr1 (19-78)||(2350351-2350412)
chr1 (19-78)||(19424104-19424165)
chr1 (19-78)||(29332342-29332403)
chr1 (22-73)||(29936662-29936715)
chr1 (25-77)||(4616937-4616989)
chr1 (19-78)||(3341712-3341773)
chr1 (19-78)||(9768785-9768846)
chr1 (22-77)||(9976361-9976418)
chr1 (19-59)||(25800330-25800370)
chr1 (23-78)||(39433420-39433475)
chr1 (22-77)||(41677121-41677178)
chr1 (19-78)||(42832005-42832064)
chr1 (19-78)||(46116152-46116211)
[»] chr5 (31 HSPs)
chr5 (21-78)||(20735153-20735210)
chr5 (19-78)||(1463929-1463988)
chr5 (19-78)||(18303056-18303115)
chr5 (21-77)||(38230184-38230240)
chr5 (19-78)||(4674793-4674852)
chr5 (19-78)||(36045112-36045171)
chr5 (25-78)||(37417108-37417161)
chr5 (21-73)||(25346244-25346296)
chr5 (19-77)||(10943774-10943832)
chr5 (19-78)||(37303992-37304050)
chr5 (22-78)||(30733181-30733237)
chr5 (23-78)||(6447458-6447513)
chr5 (19-78)||(843346-843405)
chr5 (19-78)||(29096286-29096345)
chr5 (19-78)||(17077419-17077480)
chr5 (19-78)||(42355731-42355792)
chr5 (19-78)||(3535912-3535973)
chr5 (19-78)||(28537193-28537254)
chr5 (19-78)||(32158392-32158451)
chr5 (19-78)||(18872579-18872636)
chr5 (19-78)||(29841406-29841465)
chr5 (19-77)||(38618660-38618718)
chr5 (29-71)||(1185849-1185891)
chr5 (19-75)||(42455375-42455431)
chr5 (19-78)||(1244705-1244764)
chr5 (19-78)||(2029106-2029165)
chr5 (19-78)||(6806618-6806677)
chr5 (19-78)||(18478061-18478120)
chr5 (19-78)||(19058982-19059041)
chr5 (19-78)||(30403808-30403867)
chr5 (31-63)||(36091309-36091341)
[»] chr2 (26 HSPs)
chr2 (21-78)||(43871013-43871070)
chr2 (19-78)||(34034408-34034467)
chr2 (19-73)||(29035034-29035088)
chr2 (19-78)||(2304348-2304407)
chr2 (19-78)||(44187762-44187821)
chr2 (19-78)||(44422165-44422224)
chr2 (19-78)||(580761-580820)
chr2 (19-78)||(17154707-17154766)
chr2 (19-76)||(8234772-8234829)
chr2 (19-61)||(21970434-21970476)
chr2 (25-67)||(36106884-36106926)
chr2 (19-73)||(5901812-5901868)
chr2 (19-75)||(11837047-11837103)
chr2 (19-60)||(32527073-32527114)
chr2 (19-78)||(11133134-11133193)
chr2 (19-78)||(32891339-32891398)
chr2 (21-64)||(13019284-13019327)
chr2 (19-76)||(3037602-3037659)
chr2 (25-78)||(3179388-3179441)
chr2 (19-73)||(23403364-23403418)
chr2 (19-69)||(23405257-23405309)
chr2 (22-67)||(19208863-19208910)
chr2 (19-78)||(19905633-19905692)
chr2 (23-78)||(32943401-32943456)
chr2 (23-78)||(34018048-34018103)
chr2 (21-78)||(34107554-34107613)
[»] scaffold0308 (1 HSPs)
scaffold0308 (19-78)||(7134-7193)
[»] scaffold0809 (1 HSPs)
scaffold0809 (21-78)||(4784-4841)
[»] chr7 (29 HSPs)
chr7 (19-78)||(24397003-24397062)
chr7 (19-75)||(31475821-31475877)
chr7 (21-78)||(41139147-41139204)
chr7 (19-71)||(19126795-19126847)
chr7 (19-78)||(28914853-28914914)
chr7 (26-66)||(14818355-14818395)
chr7 (26-66)||(15265353-15265393)
chr7 (19-78)||(41417253-41417312)
chr7 (23-78)||(47635112-47635166)
chr7 (19-78)||(4169134-4169193)
chr7 (19-78)||(34948164-34948223)
chr7 (19-78)||(48258160-48258221)
chr7 (19-75)||(21285334-21285390)
chr7 (26-67)||(24304272-24304313)
chr7 (19-78)||(29658250-29658309)
chr7 (19-78)||(33202532-33202591)
chr7 (19-78)||(3961384-3961445)
chr7 (26-73)||(8859781-8859830)
chr7 (21-78)||(38451923-38451980)
chr7 (19-78)||(48433686-48433747)
chr7 (22-78)||(22706006-22706062)
chr7 (19-59)||(3889797-3889837)
chr7 (19-78)||(14102519-14102578)
chr7 (19-78)||(14412536-14412595)
chr7 (19-59)||(14707350-14707390)
chr7 (23-78)||(27907874-27907929)
chr7 (23-75)||(37129340-37129392)
chr7 (19-59)||(38378277-38378317)
chr7 (19-78)||(47552271-47552330)
[»] scaffold0227 (1 HSPs)
scaffold0227 (21-78)||(21909-21965)
[»] scaffold0112 (1 HSPs)
scaffold0112 (19-74)||(17913-17968)
[»] scaffold0009 (1 HSPs)
scaffold0009 (19-77)||(108340-108398)
[»] scaffold0102 (1 HSPs)
scaffold0102 (33-78)||(31233-31277)
[»] scaffold0070 (1 HSPs)
scaffold0070 (23-62)||(12627-12666)
[»] scaffold0001 (1 HSPs)
scaffold0001 (19-78)||(419770-419831)
[»] scaffold1086 (1 HSPs)
scaffold1086 (19-78)||(2546-2605)


Alignment Details
Target: chr8 (Bit Score: 81; Significance: 5e-38; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 259 - 347
Target Start/End: Original strand, 32233105 - 32233193
Alignment:
Q  259 ggggatgagtagaatcagatgataacctttatcatgtgatttgatatttgattttgaagaagcttgttgaatgatttttcttatctctg 347  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32233105 ggggatgagtagaatcagaagataacctttatcatgtgatttgatatttgattttgaagaagcttattgaatgatttttcttatctctg 32233193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 2800077 - 2800136
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2800077 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 2800136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 35253858 - 35253802
Alignment:
Q  22 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35253858 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 35253802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 31129360 - 31129419
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31129360 accccggacaccccacttattcactttaaaagtgaatttttagccactaggctacctgac 31129419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 1588829 - 1588884
Alignment:
Q  23 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1588829 cggacaccccacttattcactttaaaagtgaatttctagccactatgctacctgac 1588884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 2696591 - 2696650
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  2696591 accccggacaccccacttattcactttaaaagtgaatttctgaccactaggctacctgac 2696650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 10292414 - 10292469
Alignment:
Q  23 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10292414 cggacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 10292469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 32232880 - 32232962
Alignment:
Q  94 cttgttccctagcaaataagcaatagatgaggttgattcttacatcattaaaggagttctctcaagcaagaatcgtttatgaatcaattaaggt 187  Q
    |||||||||||||||| |||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  32232880 cttgttccctagcaaagaagcaatagatgaggttgattct-----------aggagttctctcaagcaagaatcgtttatgaatcaattaaggt 32232962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 38790609 - 38790550
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38790609 accccagacaccccacttattcactttaaaagtgaatttctaggcactaggctacctgac 38790550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 35301197 - 35301141
Alignment:
Q  22 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  35301197 ccggacaccctacttattcactttaaaagtgaatttctagccactagactacctgac 35301141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 7314791 - 7314850
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  7314791 accccggacaccccacttattcactttaaaagtgaattcctagtcactaggctatctgac 7314850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 10310342 - 10310399
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||    
T  10310342 cccggacaccccacttattcactttaaaagtgaatttctagccattagactatctgac 10310399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 18009739 - 18009693
Alignment:
Q  32 cacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  18009739 cacttattcactttaaaagtgaatttctagccattaggctacctgac 18009693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 43508485 - 43508435
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactagg 69  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  43508485 accccggacaccccacttattcaccttaaaggtgaatttctagccactagg 43508435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 22426459 - 22426518
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| ||||||||| ||||||||||||||||||||||  || |||||||||||||||||    
T  22426459 acccctgacaccccatttattcactttaaaagtgaattcttaaccactaggctacctgac 22426518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 39165041 - 39165098
Alignment:
Q  22 ccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||    
T  39165041 ccggacaccccacttattcaccttaagaggtgaatttctagccactaggctacttgac 39165098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 171285 - 171344
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| ||||||||||| ||||| ||||||||| |||||||||| |||| ||||||||||    
T  171285 accccagacaccccactcattcattttaaaagtaaatttctagcaactacgctacctgac 171344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 5323980 - 5324039
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||| || || |||||||||||||||||||||||||| |||||| |||| |||||    
T  5323980 accccggactcctcagttattcactttaaaagtgaatttctaaccactaagctatctgac 5324039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 23239182 - 23239241
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||||||||||| || ||||||| |||||||||    
T  23239182 accccggacaccccacttattcaccttataaagtgaattt-taaccactagactacctgac 23239241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 14010809 - 14010750
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| |||  || |||||||||||| |||| |||||    
T  14010809 accccggacaccccacttattcaccttataaggtaaattctagccactaagctatctgac 14010750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 32233031 - 32233062
Alignment:
Q  191 acaacttgtatttcttctttaatatgtatctc 222  Q
    ||||||||||||||||||||||||||||||||    
T  32233031 acaacttgtatttcttctttaatatgtatctc 32233062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 1360171 - 1360111
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||| ||| ||||||||||  |||| |||||||||||| ||||    
T  1360171 accccggacaccccacttattca-ttttaaagtgaatttctctaaccactaggctacttgac 1360111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 8402335 - 8402285
Alignment:
Q  29 ccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||| |||| || ||||||||||||||||||||||| ||||    
T  8402335 ccccacttattcaccttaagaggtgaatttctagccactaggctacttgac 8402285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 17855707 - 17855745
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaattt 57  Q
    |||||||||||||||||||||||| || |||||||||||    
T  17855707 accccggacaccccacttattcacatttaaagtgaattt 17855745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 36359753 - 36359696
Alignment:
Q  21 cccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||| ||| ||| |||||| ||||||||||| |||||||||    
T  36359753 cccggacaccccacttattcaccttataaggtgaatt-ctagccactagactacctgac 36359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 39258643 - 39258697
Alignment:
Q  24 ggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||  ||| |||  || |||||||||||||||||||||||    
T  39258643 ggacaccccacttattcatcttataaggtaaattctagccactaggctacctgac 39258697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 7649593 - 7649645
Alignment:
Q  26 acaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  7649593 acaccccacttattcaccttacaaggtgaa-ttctagccactaggctacctgac 7649645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 10557502 - 10557457
Alignment:
Q  23 cggacaccccacttattcactttaaaag-tgaatttctagccacta 67  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||    
T  10557502 cggacaccccacttatccaccttaaaagttgaatttctagccacta 10557457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 14352845 - 14352792
Alignment:
Q  25 gacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||| || |||||||| ||| ||||| | |||||||||||||||||||||||    
T  14352845 gacacctcatttattcaccttataagtggaattctagccactaggctacctgac 14352792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 42762065 - 42762010
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||| || || ||||| ||||||||||||| |||||||||    
T  42762065 cccggacaccccacttattcacctt-aaggtgaa-ttctagccactagactacctgac 42762010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 43468739 - 43468683
Alignment:
Q  22 ccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||||| |||||    
T  43468739 ccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctatctgac 43468683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 4798578 - 4798519
Alignment:
Q  19 accccggacaccccacttattca-ctttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||| |||  || ||||| ||||||||||||| |||||||||    
T  4798578 accccggacaccccacttattcaccttgtaaggtgaa-ttctagccactagactacctgac 4798519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 10970324 - 10970383
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||| ||||||||||||||||| ||| ||| |||| |||||||||||||| ||||||||    
T  10970324 accccgaacaccccacttattcaccttataagatgaa-ttctagccactaggttacctgac 10970383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 19957358 - 19957318
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttct 59  Q
    |||||||||||||||||||||||| || || ||||||||||    
T  19957358 accccggacaccccacttattcacctttaaggtgaatttct 19957318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 24074568 - 24074623
Alignment:
Q  23 cggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||| ||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  24074568 cggacacctcacttattcaccttataaggtgaa-ttctagccactaggctacctgac 24074623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 25689425 - 25689366
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||| ||||| |||| ||| |||||||||| ||| |||||||||||||||||    
T  25689425 accccggacaccctacttaatcaccttataaagtgaatt-ctaaccactaggctacctgac 25689366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 36815492 - 36815460
Alignment:
Q  28 accccacttattcactttaaaagtgaatttcta 60  Q
    ||||||||||||||||| |||||||||||||||    
T  36815492 accccacttattcacttcaaaagtgaatttcta 36815460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 39172248 - 39172189
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttc--tagccactaggctacctgac 78  Q
    ||||||||||||| |||||||| || ||||||||||||  ||||| ||||||||| ||||    
T  39172248 cccggacaccccatttattcacctttaaagtgaatttctttagcccctaggctacttgac 39172189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 45536776 - 45536816
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttct 59  Q
    |||||||||||||||||||||||  |||| |||||||||||    
T  45536776 accccggacaccccacttattcatcttaatagtgaatttct 45536816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 8690272 - 8690331
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8690272 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 8690331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 9693020 - 9693079
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9693020 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 9693079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 14149851 - 14149910
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14149851 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 14149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 28520768 - 28520709
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28520768 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 28520709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 48968247 - 48968188
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48968247 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 48968188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 53815754 - 53815813
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  53815754 accccggacaccccacttattcactataaaagtgaatttctagccactaggctacctgac 53815813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 36954195 - 36954254
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  36954195 accccggacaccccatttattcactttaaaagtgaatttctagctactaggctacctgac 36954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 52031265 - 52031324
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52031265 accccagacaccccacttattcactttaaaagtgaatttctagccactatgctacctgac 52031324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 15640474 - 15640421
Alignment:
Q  25 gacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15640474 gacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 15640421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 46799465 - 46799520
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacc 74  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  46799465 accccggacaccccatttattcactttaaaagtgaatttctagccactagactacc 46799520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 53355003 - 53354944
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  53355003 accccggacaccccacttatttactttaaaaatgaatttctaaccactaggctacctgac 53354944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 42411491 - 42411431
Alignment:
Q  19 accccggacaccccacttattcactttaaaa-gtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  42411491 accccggacaccccacttatttactttaaaaagtgaatttctagccactaggctacttgac 42411431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 40150531 - 40150590
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||    
T  40150531 accccggacacctcacttattcactttaaaagtgaatttctatccattagactacctgac 40150590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 52330943 - 52330887
Alignment:
Q  22 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| ||||| ||||    
T  52330943 ccggacaccccacttattcactttaaaagtgaatttccaaccactaagctacttgac 52330887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 36257752 - 36257806
Alignment:
Q  19 accccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctac 73  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  36257752 accccggacaccccacttattcactttaaaaagtgaa-ttctagccactaggctac 36257806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 56546480 - 56546427
Alignment:
Q  25 gacaccccacttattcacttt-aaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  56546480 gacaccccacttattcactttaaaaagtgaa-ttctagccactaggctacctgac 56546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 5909814 - 5909761
Alignment:
Q  25 gacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||| |||||||||||||||||||| |||||||||| |||||| ||||||||||    
T  5909814 gacatcccacttattcactttaaaaatgaatttctaaccactaagctacctgac 5909761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 7768825 - 7768772
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 72  Q
    ||||||||||||||||||||||||||||||| |||| |||||| || |||||||    
T  7768825 accccggacaccccacttattcactttaaaaatgaaattctagtcattaggcta 7768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 46799569 - 46799613
Alignment:
Q  34 cttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||    
T  46799569 cttattcactttaaaagtgaatttctaaccactagactacctgac 46799613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 48501688 - 48501636
Alignment:
Q  26 acaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||    
T  48501688 acaccccacttattcactttaaaagtgaattcctaaccagtagactacctgac 48501636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27296896 - 27296939
Alignment:
Q  35 ttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  27296896 ttattcactttaaaagtaaatttctagccactagactacctgac 27296939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 26708583 - 26708534
Alignment:
Q  25 gacaccccacttattcactttaaaagtgaatttctagccactaggctacct 75  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  26708583 gacacctcacctattcactttaaa-gtgaatttctagccactaggctacct 26708534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 31578077 - 31578134
Alignment:
Q  21 cccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  31578077 cccggacaccccacttattcacattataaggtgaa-ttctagccactaggctacctgac 31578134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 30616059 - 30616111
Alignment:
Q  20 ccccggacaccccacttattcacttt-aaaagtgaatttctagccactaggcta 72  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  30616059 ccccggacaccccacttattcactttaaaaagtgaa-ttctagtcactaggcta 30616111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 31156254 - 31156198
Alignment:
Q  22 ccggacaccccacttattcactttaaaa-gtgaatttctagccactaggctacctgac 78  Q
    ||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  31156254 ccggataccgcacttattcactttaaaaagtgaatt-ctagccactaggctacctgac 31156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 37889643 - 37889587
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctac 73  Q
    |||||||||||| |||||||||||||| || |||||||  |||||||||||||||||    
T  37889643 accccggacacctcacttattcacttttaaggtgaatttctctagccactaggctac 37889587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 20753162 - 20753103
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||| ||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  20753162 accccggacaccacacttattcaccttataaggtgaatt-ctagccactaggctacctgac 20753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 30152172 - 30152231
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| ||||||||| |||||||||||||    
T  30152172 accccggacaccccacttattcaccttataaggtgaa-ttctagccaataggctacctgac 30152231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 30295571 - 30295630
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||| |||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  30295571 accccagacaccccacttattcaccttagaaggtgaa-ttctagccactaggctacctgac 30295630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 30324473 - 30324532
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||| |||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  30324473 accccagacaccccacttattcaccttagaaggtgaa-ttctagccactaggctacctgac 30324532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 46206650 - 46206701
Alignment:
Q  23 cggacaccccacttattcactttaa-aagtgaatttctagccactaggctac 73  Q
    |||||||||||||||||||| |||| | |||||||||||||||||| |||||    
T  46206650 cggacaccccacttattcaccttaagaggtgaatttctagccactatgctac 46206701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 11491256 - 11491195
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  || || |||||||  ||||||||||||||||| ||||    
T  11491256 accccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgac 11491195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 36993099 - 36993160
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttct--agccactaggctacctgac 78  Q
    ||||||||||||||| |||||||  || || ||||||||||  |||||||||||||||||||    
T  36993099 accccggacaccccaattattcatctttaaggtgaatttctctagccactaggctacctgac 36993160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 37574330 - 37574391
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    ||||||| |||||||||||||||| || || |||||||  ||||||||||||||||| ||||    
T  37574330 accccgggcaccccacttattcacctttaaggtgaatttctctagccactaggctacttgac 37574391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 50815765 - 50815826
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||| ||||||  ||||| |||||||  ||||||||||||||||| ||||    
T  50815765 accccggacaccccacatattcatcttaaaggtgaatttctctagccactaggctacttgac 50815826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 3465641 - 3465697
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacct 75  Q
    |||||||||||||||||||||||| ||| || ||||| ||||||||||||| ||||||    
T  3465641 accccggacaccccacttattcaccttataaggtgaa-ttctagccactagactacct 3465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 11872931 - 11872988
Alignment:
Q  19 accccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctacct 75  Q
    |||||||||| || ||||||||||||| |||||| ||||| |||||| ||||||||||    
T  11872931 accccggacatcctacttattcactttaaaaagtaaatttttagccattaggctacct 11872988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 41003206 - 41003150
Alignment:
Q  22 ccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| ||| ||| |||||| ||| |||||||||||||||||    
T  41003206 ccggacaccccacttattcaccttacaagatgaatt-ctaaccactaggctacctgac 41003150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 43143781 - 43143837
Alignment:
Q  22 ccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| ||| ||||||||||| |||  |||||||||||||||    
T  43143781 ccggacaccccacttattcaccttataaagtgaattt-tagagactaggctacctgac 43143837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 44074913 - 44074969
Alignment:
Q  21 cccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctga 77  Q
    |||||||||||||||||||||| ||| || |||||||| |||||| ||||||||||||    
T  44074913 cccggacaccccacttattcaccttataaggtgaattt-tagccattaggctacctga 44074969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 56314823 - 56314875
Alignment:
Q  23 cggacaccccacttattcactttaaaa-gtgaatttctagccactaggctacct 75  Q
    |||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||    
T  56314823 cggacaccacacttattcacattaaaaggtgaa-ttctagccactaggctacct 56314875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 10098183 - 10098242
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  ||| ||| |||| ||||||||||||| |||||||||    
T  10098183 accccggacaccccacttattcatcttataagatgaa-ttctagccactagactacctgac 10098242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 17859836 - 17859895
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||| ||||| ||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  17859836 accccgaacacctcacttattcaccttataaggtgaa-ttctagccactaggctacctgac 17859895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 28221344 - 28221289
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacc 74  Q
    |||||||||||||||||||||||| ||| ||| |||||| ||| |||||||||||||    
T  28221344 accccggacaccccacttattcaccttataaggtgaatt-ctaaccactaggctacc 28221289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 29269352 - 29269293
Alignment:
Q  19 accccggacaccccacttattca-ctttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||| |||  |  |||||||| ||||||||||||||||||||    
T  29269352 accccggacaccccacttattcatcttatatggtgaattt-tagccactaggctacctgac 29269293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 34773720 - 34773673
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccact 66  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  34773720 accccggacaccccacttattcactttataaggtgaatt-ctagccact 34773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 41943965 - 41944024
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||| |||||||||| ||| || ||||| |||||||| ||||||||||||||    
T  41943965 accccggacaccctacttattcaccttataaggtgaa-ttctagccgctaggctacctgac 41944024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 27183718 - 27183659
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27183718 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 27183659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 9625041 - 9625100
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9625041 accccggacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 9625100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 10959191 - 10959250
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10959191 accccggacaccccacttattcactttaaaagtgaatttctagtcactagactacctgac 10959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 24559447 - 24559506
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  24559447 accccggacaccccacttattcactttaaaagtgaatttctaaccactaggttacctgac 24559506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 36476417 - 36476476
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36476417 accccgaacaccccacttattcactttaaaagtgaattcctagccactaggctacctgac 36476476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 52030179 - 52030238
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  52030179 accccggacaccctacttattcactttaaaagtgaatttttagccactaggctacctgac 52030238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 24136789 - 24136728
Alignment:
Q  19 accccggacaccccacttattcactttaaaa--gtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  24136789 accccggacaccccacttattcactttaaaaaggtgaatttctagccactaggctacttgac 24136728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 32453552 - 32453502
Alignment:
Q  27 caccccacttattcactttaaaagtgaatttctagccactaggctacctga 77  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32453552 caccccacttattcactttaaaagtgaatttctagtcactaggctacctga 32453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 14868743 - 14868799
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 75  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  14868743 accccgaacaccccacttattcactttaaaagtgaaattctagccactaggttacct 14868799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 42824018 - 42823966
Alignment:
Q  23 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  42824018 cggacaccctacttattcactttaaaagtgaatttctagccactagactacct 42823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 7448400 - 7448341
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  7448400 accccagataccccacttattcacttcaaaagtgaatttctagccactagactacctgac 7448341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 7456542 - 7456483
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  7456542 accccagataccccacttattcacttcaaaagtgaatttctagccactagactacctgac 7456483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 36331763 - 36331704
Alignment:
Q  19 accccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  36331763 accccggacaccccacttattcactttaaaaagtgaa-ttctagccactagactacctgac 36331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 38555058 - 38555006
Alignment:
Q  26 acaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  38555058 acacctcacttattcactttaaaagtgaatttctagccaccagactacctgac 38555006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 3784128 - 3784187
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||  |||||||||    
T  3784128 accccggacaccccaccttttcattttaaaagtgaatttctagccactaaactacctgac 3784187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 33206815 - 33206874
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  33206815 accccggacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 33206874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 34344815 - 34344756
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  34344815 accccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 34344756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 46328961 - 46328902
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  46328961 accccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 46328902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 50724429 - 50724484
Alignment:
Q  23 cggacaccccacttattca-ctttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  50724429 cggacaccccacttattcaccttaaaaagtgaa-ttctagccactaggctacctgac 50724484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 50788419 - 50788364
Alignment:
Q  23 cggacaccccacttattcactttaaaa-gtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  50788419 cggacaccccacttattcaccttaaaaagtgaatt-ctagccactaggctacctgac 50788364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 3955366 - 3955424
Alignment:
Q  19 accccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctacctga 77  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||    
T  3955366 accccggacaccccacttattcactttaaaaagtgaa-ttctagccactaaactacctga 3955424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 8931013 - 8930953
Alignment:
Q  20 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||| || ||||||||||  ||||||| ||||||||| ||||    
T  8931013 ccccggacaccccacttattcacctttaaagtgaatttctctagccgctaggctacttgac 8930953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 36763491 - 36763551
Alignment:
Q  21 cccggacaccccacttattca-ctttaaaa--gtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||||||| |||| ||||    
T  36763491 cccggacaccccacttattcatctttaaaaaggtgaatttctagccactagactacttgac 36763551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 44671529 - 44671586
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||| ||| |||||||||||||||||||||||||||||||  || ||| |||||||||    
T  44671529 cccgaacatcccacttattcactttaaaagtgaatttctattcattagactacctgac 44671586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 45118711 - 45118756
Alignment:
Q  29 ccccacttattcactttaaaag-tgaatttctagccactaggctac 73  Q
    ||||||||||||||||||| || |||||||||||||||||||||||    
T  45118711 ccccacttattcactttaagaggtgaatttctagccactaggctac 45118756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 14417926 - 14417985
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| |||||||||||| ||||||||||    
T  14417926 accccggacaccccacttattcaccttataaggtgaa-ttctagccactaagctacctgac 14417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 28226222 - 28226178
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccac 65  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||    
T  28226222 cccgaacaccccacttattcactttaaaagtaaatttgtagccac 28226178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 35140779 - 35140835
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 77  Q
    ||||||||||||| |||||||| ||| |||| || ||||||||||||| ||||||||    
T  35140779 cccggacaccccaattattcaccttataagttaaattctagccactagactacctga 35140835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 44976642 - 44976690
Alignment:
Q  30 cccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||  |||||||||| ||| |||||    
T  44976642 cccacttattcactttaaaagtgaattcttagccactagtctatctgac 44976690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 47191431 - 47191490
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||| ||||||||||||||||| ||| ||| |||| |||||||||||||||||||||||    
T  47191431 accccgaacaccccacttattcaccttataagatgaa-ttctagccactaggctacctgac 47191490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 27394565 - 27394626
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| || || |||||||  ||||||| ||||||||| ||||    
T  27394565 accccggacaccccacttattcacctttaaggtgaatttctctagccgctaggctacttgac 27394626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 35483329 - 35483383
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 75  Q
    |||||||||||||||||||||| ||| |||  || ||||||||||||| ||||||    
T  35483329 cccggacaccccacttattcaccttataaggtaaattctagccactagactacct 35483383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 40160793 - 40160849
Alignment:
Q  19 accccggacaccccacttattca-ctttaaaa--gtgaatttctagccactaggctac 73  Q
    ||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||    
T  40160793 accccggacaccccacttattcacctttaaaaaggtgaa-ttctagccactaggctac 40160849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 41460385 - 41460336
Alignment:
Q  21 cccggacaccccacttattcacttta--aaagtgaatttctagccactag 68  Q
    |||||| ||||||||||||||| |||  ||||||||||||||||||||||    
T  41460385 cccggataccccacttattcaccttataaaagtgaatttctagccactag 41460336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 43566827 - 43566774
Alignment:
Q  25 gacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  43566827 gacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 43566774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 43598863 - 43598897
Alignment:
Q  26 acaccccacttattcactttaaaagtgaatttcta 60  Q
    |||||||||||||||||||||||| ||||||||||    
T  43598863 acaccccacttattcactttaaaaatgaatttcta 43598897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 47864694 - 47864755
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  || || |||||||  ||||||||||||||||| ||||    
T  47864694 accccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgac 47864755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 31419648 - 31419681
Alignment:
Q  26 acaccccacttattcactttaaaagtgaatttct 59  Q
    ||||||||||||||||| ||||||||||||||||    
T  31419648 acaccccacttattcaccttaaaagtgaatttct 31419681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 45431685 - 45431741
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaattt--ctagccactaggctac 73  Q
    |||||||||||||||||||||||| || || ||||||||  |||||| |||||||||    
T  45431685 accccggacaccccacttattcacctttaaggtgaatttccctagccgctaggctac 45431741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 49146142 - 49146190
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccacta 67  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  49146142 accccggacaccccacttattcactttataaggtgaa-ttctagccacta 49146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 42832099 - 42832040
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||| ||| |||||||| ||| ||| |||||| |||||||||||||||||||||    
T  42832099 accccggacactccatttattcaccttataaggtgaatt-ctagccactaggctacctgac 42832040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 43774243 - 43774302
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||| |||||||||||||||||| ||| || ||||| |||||||||||||| ||||||||    
T  43774243 accccagacaccccacttattcaccttataaggtgaa-ttctagccactaggttacctgac 43774302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 49429518 - 49429558
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttct 59  Q
    |||||||||||||||||||||||| || || ||||||||||    
T  49429518 accccggacaccccacttattcacctttaaggtgaatttct 49429558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 29284176 - 29284234
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29284176 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 29284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 14981739 - 14981680
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14981739 accctggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 14981680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 33628978 - 33628925
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33628978 accccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 33628925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 9064924 - 9064983
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9064924 accccagacaccccacttatttactttaaaagtgaatttctagccactaggctacctgac 9064983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 11636744 - 11636803
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||    
T  11636744 accccggacaccccactttttcattttaaaagtgaatttctaaccactaggctacctgac 11636803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 24470428 - 24470370
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 77  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24470428 accccggaaatcccacttattcactttaaaagtgaatttctagccaataggctacctga 24470370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 6658580 - 6658521
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||||||| ||||    
T  6658580 accccggacaccccacttattctccttaaaagagaatttctagccactaggctacttgac 6658521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 6144022 - 6144069
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccact 66  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  6144022 accccggacaccccacttattcactttaaaactgaatttctggccact 6144069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 25020565 - 25020506
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  25020565 accccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 25020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 12089155 - 12089214
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| |||||||||||||| ||||||||    
T  12089155 accccggacaccccacttattcaccttataaggtgaa-ttctagccactaggatacctgac 12089214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 21507235 - 21507192
Alignment:
Q  22 ccggacaccccacttattcactttaaaagtgaatttctagccact 66  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  21507235 ccggacaccccacttattcactttataagtgaa-ttctagccact 21507192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 18904715 - 18904661
Alignment:
Q  24 ggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  18904715 ggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 18904661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 5134465 - 5134412
Alignment:
Q  25 gacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  5134465 gacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 5134412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 6228297 - 6228236
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  || || |||||||  ||||||||||||||||| ||||    
T  6228297 accccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgac 6228236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 10424570 - 10424513
Alignment:
Q  21 cccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||| ||| ||||| |||| ||||||||| |||||||||||    
T  10424570 cccggacaccccacttattcaccttataaagtaaatt-ctagccacttggctacctgac 10424513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 18903404 - 18903343
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  || || |||||||  ||||||||||||||||| ||||    
T  18903404 accccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgac 18903343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 2970247 - 2970306
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||| ||||||||| | |||||||||||    
T  2970247 accccggacaccccacttattcaccttataagatgaa-ttctagccatttggctacctgac 2970306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 3448410 - 3448469
Alignment:
Q  19 accccggacaccccacttattca-ctttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||| |||  || ||||| ||||||||| |||||||||||||    
T  3448410 accccggacaccccacttattcatcttataaggtgaa-ttctagccaataggctacctgac 3448469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 9491772 - 9491713
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| ||| ||||||||||| |||||    
T  9491772 accccggacaccccacttattcaccttataagatgaatt-ctaaccactaggctaactgac 9491713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 10377161 - 10377102
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||| ||||||||||||||||| ||| ||| |||||| ||||||||||| |||||||||    
T  10377161 accccgaacaccccacttattcacgttataagatgaatt-ctagccactagactacctgac 10377102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 12127946 - 12127887
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||| |||||||||||| ||| ||| |||||| ||||||||||| |||||||||    
T  12127946 accccggacacgccacttattcaccttataaggtgaatt-ctagccactagactacctgac 12127887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 15869099 - 15869040
Alignment:
Q  21 cccggacaccccacttattcactttaaaa--gtgaatttctagccactaggctacctgac 78  Q
    ||||||| || ||||||||||| ||||||  |||| ||||||||||||||||||| ||||    
T  15869099 cccggactcctcacttattcaccttaaaaaggtgagtttctagccactaggctacttgac 15869040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 18991471 - 18991420
Alignment:
Q  26 acaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||  || ||||||| |||||||||||||||| ||||    
T  18991471 acaccccacttattcacttataaggtgaatt-ctagccactaggctacttgac 18991420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 30566116 - 30566175
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| ||| ||||||||| |||||||||    
T  30566116 accccggacaccccacttattcaccttataaggtgaa-ttccagccactagactacctgac 30566175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 32344700 - 32344736
Alignment:
Q  22 ccggacaccccacttattcactttaaaagtgaatttc 58  Q
    ||||||||||||||||||||| || ||||||||||||    
T  32344700 ccggacaccccacttattcacctttaaagtgaatttc 32344736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 40678882 - 40678940
Alignment:
Q  20 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40678882 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 40678940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 13870116 - 13870059
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13870116 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 13870059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 17350119 - 17350172
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17350119 accccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 17350172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 17954893 - 17954841
Alignment:
Q  22 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacc 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17954893 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacc 17954841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 19976589 - 19976533
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 75  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19976589 accccggacaccccacatattcactttaaaagtgaatttctagccactaggctacct 19976533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 25819243 - 25819302
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25819243 accccggataccccacttattcactttaaaagtgaatttctagccactagactacctgac 25819302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 39238774 - 39238833
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  39238774 accccggacaccccacttattcactttaaaagtgaatttctagccgctaggctatctgac 39238833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 47763418 - 47763363
Alignment:
Q  23 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47763418 cggacatcccacttattcactttaaaagtgaatttctagccactaggctacctgac 47763363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 52833143 - 52833085
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 77  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  52833143 accccggacatcccatttattcactttaaaagtgaatttctagacactaggctacctga 52833085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 29491528 - 29491580
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29491528 accccggacaccccacttattcacttt-aaagtgaatttctagccactaggcta 29491580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 35111714 - 35111766
Alignment:
Q  26 acaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  35111714 acaccccacttattcactttaaaagtgaatttctagccactacgctagctgac 35111766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 38021310 - 38021369
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||||    
T  38021310 accccggacaccccacttattcactttaaaagtgaatttttagcgaatagggtacctgac 38021369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 2044982 - 2044942
Alignment:
Q  38 ttcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2044982 ttcactttaaaagtgaatttctagccactaggctacctgac 2044942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 29106902 - 29106846
Alignment:
Q  22 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||    
T  29106902 ccggacaccccatttattcacttgaaaagtgaatttctagccaccaggttacctgac 29106846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 32635198 - 32635258
Alignment:
Q  19 accccggacaccccacttattcactttaa-aagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||||    
T  32635198 accccggacaccccacttattcaccttaagaggtgaatttctagccactaggctacttgac 32635258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 12553252 - 12553313
Alignment:
Q  19 accccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||   ||| ||||| |||||||||||||||||||||||    
T  12553252 accccggacaccccacttattcactttgaaaaaggtgaa-ttctagccactaggctacctgac 12553313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 15368863 - 15368922
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||| |||| || ||||| |||||||||||||||||||||||    
T  15368863 accccggacaccccacttattcattttataaggtgaa-ttctagccactaggctacctgac 15368922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 32660888 - 32660948
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||| ||||| |||| || ||||||||||||||||||||||| ||||    
T  32660888 accccggacaccccactttttcaccttaagaggtgaatttctagccactaggctacttgac 32660948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 38019984 - 38019925
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  38019984 accccagacaccccacttattcaccttataaagtgaatt-ctagccactaggctacctgac 38019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 12675768 - 12675726
Alignment:
Q  31 ccacttattcactttaaaagtgaatttctagccactaggctac 73  Q
    |||||||||||||||||||||||||||||| ||||||| ||||    
T  12675768 ccacttattcactttaaaagtgaatttctaaccactagactac 12675726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 23368769 - 23368708
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||||| |||||||  |||||||||||| |||| ||||    
T  23368769 accccggacaccccacttattcacattaaaggtgaatttatctagccactagtctacttgac 23368708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 49620030 - 49620091
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  || ||||||||||  ||||||||||||||||| ||||    
T  49620030 accccggacaccccacttattcatctttaaagtgaatttctctagccactaggctacttgac 49620091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 3533011 - 3532952
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| ||||| |||||||||||||||    
T  3533011 accccggacaccccacttattcaccttataaggtgaatt-ctagctactaggctacctgac 3532952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 11405514 - 11405573
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| |||||||||||| ||||||||||    
T  11405514 accccggacaccccacttattcaccttataaggtgaa-ttctagccactaagctacctgac 11405573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 15774349 - 15774290
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||| ||||||||||    
T  15774349 accccggacaccccacttattcaccttataaggtgaatt-ctagccactaagctacctgac 15774290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 19516511 - 19516479
Alignment:
Q  33 acttattcactttaaaagtgaatttctagccac 65  Q
    |||||||||||||||||||||||||||||||||    
T  19516511 acttattcactttaaaagtgaatttctagccac 19516479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 19793584 - 19793643
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| ||||| |||||||||||||||||    
T  19793584 accccggacaccccacttattcaccttataaggtgaa-ttctaaccactaggctacctgac 19793643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 35593821 - 35593880
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| |||||||| ||||||||||||||    
T  35593821 accccggacaccccacttattcaccttataaggtgaa-ttctagccgctaggctacctgac 35593880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 37733813 - 37733872
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| ||||| |||||||||||||||||    
T  37733813 accccggacaccccacttattcaccttataaggtgaa-ttctaaccactaggctacctgac 37733872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 42946504 - 42946464
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttct 59  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  42946504 accccggacaccccacttattcaccttaaaggtgaatttct 42946464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 50859404 - 50859345
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||| ||||    
T  50859404 accccggacaccccacatattcaccttaaaaggtgaatt-ctagccactaggctacttgac 50859345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 4354138 - 4354084
Alignment:
Q  23 cggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctga 77  Q
    |||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  4354138 cggacaccccacttattcaccttataaagtgaa-ttctagccaccaggctacctga 4354084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 32585406 - 32585465
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||| |||| || | | ||||||||||||||| |||||||| ||||    
T  32585406 accccggacaccccactttttcatttaagaggtgaatttctagccattaggctacttgac 32585465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 2350412 - 2350351
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttc--tagccactaggctacctgac 78  Q
    |||||| ||||||||||||||||| || ||||||||||||  ||||| ||||||||| ||||    
T  2350412 accccgaacaccccacttattcacctttaaagtgaatttctttagccgctaggctacttgac 2350351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 19424104 - 19424165
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| || || |||||||  ||||||| ||||||||| ||||    
T  19424104 accccggacaccccacttattcacctttaaggtgaatttctctagccgctaggctacttgac 19424165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 29332342 - 29332403
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| || || |||||||  ||||||| ||||||||| ||||    
T  29332342 accccggacaccccacttattcacctttaaggtgaatttctctagccgctaggctacttgac 29332403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 29936715 - 29936662
Alignment:
Q  22 ccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctac 73  Q
    ||||||||||||||||||||  |||||||||||||  |||||||| ||||||||    
T  29936715 ccggacaccccacttattcatcttaaaagtgaatttctctagccattaggctac 29936662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 4616937 - 4616989
Alignment:
Q  25 gacaccccacttattcacttta-aaagtgaatttctagccactaggctacctga 77  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||| ||||||||    
T  4616937 gacaccccacttattcaccttataaagtgaa-ttctagccactagactacctga 4616989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 3341773 - 3341712
Alignment:
Q  19 accccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||   ||| ||||| |||||||||||||||| ||||||    
T  3341773 accccggacaccccacttattcaccttgaaaaaggtgaa-ttctagccactaggctgcctgac 3341712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 9768846 - 9768785
Alignment:
Q  19 accccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||   ||| ||||| ||||||| |||||||||||||||    
T  9768846 accccggacaccccacttattcaccttgaaaaaggtgaa-ttctagctactaggctacctgac 9768785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 9976418 - 9976361
Alignment:
Q  22 ccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctga 77  Q
    ||||||||||||||||||||| ||   ||||||||| |||||||||||| |||||||||    
T  9976418 ccggacaccccacttattcaccttgaaaaaagtgaa-ttctagccactacgctacctga 9976361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 25800370 - 25800330
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttct 59  Q
    |||||||||||||||||||||||  ||||| ||||||||||    
T  25800370 accccggacaccccacttattcatcttaaaggtgaatttct 25800330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 39433420 - 39433475
Alignment:
Q  23 cggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||||||| ||||||    
T  39433420 cggacaccccacttattcaccttataaggtgaa-ttctagccactaggctgcctgac 39433475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 41677121 - 41677178
Alignment:
Q  22 ccggacaccccacttattcactttaaaa---gtgaatttctagccactaggctacctga 77  Q
    ||||||||||||||||||||| || |||   ||||||| ||||||||||||||||||||    
T  41677121 ccggacaccccacttattcaccttgaaaaaggtgaatt-ctagccactaggctacctga 41677178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 42832005 - 42832064
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| |||||| |||||||||| |||||    
T  42832005 accccggacaccccacttattcaccttataaggtgaa-ttctagtcactaggctatctgac 42832064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 46116211 - 46116152
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||| |||||||| ||| ||| |||||| ||| |||||||||||||||||    
T  46116211 accccggacaccccaattattcaccttataaggtgaatt-ctaaccactaggctacctgac 46116152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 20735210 - 20735153
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20735210 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 20735153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 1463929 - 1463988
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1463929 accccggacaccccacttattcactttaaaagtgaatttctagccaccaggctacctgac 1463988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 18303115 - 18303056
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18303115 accccgaacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 18303056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 38230240 - 38230184
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 77  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  38230240 cccggacacctcacttattcactttaaaagtgaatttctagccactatgctacctga 38230184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 4674852 - 4674793
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||    
T  4674852 accccggacaccccacttattcactttaaaagtgaatttctaaccactaaactacctgac 4674793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 36045171 - 36045112
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  36045171 accccggacaccccacttattcactttaaaagtgaatttctaaccaataggccacctgac 36045112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 37417161 - 37417108
Alignment:
Q  25 gacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  37417161 gacaccccacttactcactttaaaagtgaatttctagccactaggctatctgac 37417108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 25346244 - 25346296
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctac 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  25346244 cccggacaccccacgtattcactttaaaagtgaatttctagccactaagctac 25346296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 10943774 - 10943832
Alignment:
Q  19 accccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctacctga 77  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10943774 accccggacaccccacttattcactttaaaaagtgaa-ttctagccactaggctacctga 10943832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 37303992 - 37304050
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  37303992 accctggacaccccacttattcactttaaaa-tgaatttatagccactaggctacctgac 37304050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 30733181 - 30733237
Alignment:
Q  22 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||    
T  30733181 ccggacactccacttattcacttgaaaaataaatttctagccactaggctacctgac 30733237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 6447513 - 6447458
Alignment:
Q  23 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||  |||||||||    
T  6447513 cggacaccccacttattcactttaaaaatgaatttctaaccactacactacctgac 6447458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 843405 - 843346
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  843405 accccggacaccccacttattcaccttataaattgaatt-ctagccactaggctacctgac 843346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 29096345 - 29096286
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  29096345 accccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 29096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 17077419 - 17077480
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  ||||| |||||||  ||||||||||||||||| ||||    
T  17077419 accccggacaccccacttattcatcttaaaggtgaatttatctagccactaggctacttgac 17077480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 42355731 - 42355792
Alignment:
Q  19 accccggacaccccacttattca-ctttaa-aagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||| |||||||| ||||    
T  42355731 accccggacaccccacttattcacctttaagaggtgaatttctagccattaggctacttgac 42355792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 3535973 - 3535912
Alignment:
Q  19 accccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||   ||||||||| ||||| |||||||||||||||||    
T  3535973 accccggacaccccacttattcaccttaaaaaaagtgaa-ttctaaccactaggctacctgac 3535912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 28537193 - 28537254
Alignment:
Q  19 accccggacaccccacttattcactttaaaa---gtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||| |||   ||||| |||||||||||||||||| ||||    
T  28537193 accccggacaccccacttattcactttgaaaatggtgaa-ttctagccactaggctacttgac 28537254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 32158451 - 32158392
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||| ||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  32158451 accccgaacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 32158392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 18872579 - 18872636
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||| ||||||||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  18872579 accccgaacaccccacttattcaccttaag-gtgaatt-ctagccactaggctacctgac 18872636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 29841406 - 29841465
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||| | ||| |||  || ||||||||| |||||||||||||    
T  29841406 accccggacaccccacttattccccttataaggtaaattctagccattaggctacctgac 29841465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 38618718 - 38618660
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctga 77  Q
    |||||||||||||||||||||||| ||| ||| |||||| ||||| ||||||||||||||    
T  38618718 accccggacaccccacttattcaccttataaggtgaatt-ctagcaactaggctacctga 38618660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 1185891 - 1185849
Alignment:
Q  29 ccccacttattcactttaaaagtgaatttctagccactaggct 71  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||    
T  1185891 ccccacttattcaccttaaaagtgaaattctagctactaggct 1185849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 42455431 - 42455375
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacct 75  Q
    ||||||||||| |||||||||||| ||| ||| |||||| ||||||||||||||||||    
T  42455431 accccggacactccacttattcaccttataaggtgaatt-ctagccactaggctacct 42455375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 1244764 - 1244705
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||| |||||||||||||||||| ||| ||| |||||| |||||||||||| ||||||||    
T  1244764 accccagacaccccacttattcaccttataaggtgaatt-ctagccactaggttacctgac 1244705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 2029165 - 2029106
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||| ||||||||||||||||| ||| ||| |||||| ||||||||||||||| |||||    
T  2029165 accccgaacaccccacttattcaccttataaggtgaatt-ctagccactaggctatctgac 2029106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 6806677 - 6806618
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||| |||||||||||| ||| ||| |||||| ||||||| |||||||||||||    
T  6806677 accccggacactccacttattcacattataaggtgaatt-ctagccattaggctacctgac 6806618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 18478061 - 18478120
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||| ||||||||||||||||||| ||| || ||||| ||||||||| |||||||||||||    
T  18478061 accctggacaccccacttattcaccttataaggtgaa-ttctagccattaggctacctgac 18478120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 19059041 - 19058982
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||| ||||||||||||||||||| ||| ||| |||||| ||||||||||| |||||||||    
T  19059041 accctggacaccccacttattcaccttataaggtgaatt-ctagccactagcctacctgac 19058982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 30403808 - 30403867
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| ||||| |||||| ||||||||||    
T  30403808 accccggacaccccacttattcaccttataaggtgaa-ttctaaccactaagctacctgac 30403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 36091341 - 36091309
Alignment:
Q  31 ccacttattcactttaaaagtgaatttctagcc 63  Q
    |||||||||||||||||||||| ||||||||||    
T  36091341 ccacttattcactttaaaagtgcatttctagcc 36091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 43871013 - 43871070
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43871013 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 43871070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 34034408 - 34034467
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34034408 accccggacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 34034467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 29035034 - 29035088
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctac 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29035034 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctac 29035088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 2304348 - 2304407
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  2304348 accccggacaccccacttatttactttaaaagtgaatttctaaccactaggctacctgac 2304407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 44187762 - 44187821
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  44187762 accccagacaccccacttattcactttaaaagtgaatttttagccactaaactacctgac 44187821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 44422165 - 44422224
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||| |||  || ||||| |||||||||||||||||    
T  44422165 accccggacaccccacttattcactttataaggtaaattctaaccactaggctacctgac 44422224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 580820 - 580761
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  580820 accccggacaccccacttattcaccttataagatgaatt-ctagccactaggctacctgac 580761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 17154707 - 17154766
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| |||   | |||||||||||||||||||||||    
T  17154707 accccggacaccccacttattcaccttataaggtgagttctagccactaggctacctgac 17154766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 8234829 - 8234772
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctg 76  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||    
T  8234829 accccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctg 8234772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 21970476 - 21970434
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctag 61  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  21970476 accccggataccccgcttattcactttaaaagtgaatttctag 21970434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 36106884 - 36106926
Alignment:
Q  25 gacaccccacttattcactttaaaagtgaatttctagccacta 67  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  36106884 gacactccatttattcactttaaaagtgaatttctagccacta 36106926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 5901868 - 5901812
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttc--tagccactaggctac 73  Q
    |||||||||||||||||||||||  ||||| |||||||||  |||||||||||||||    
T  5901868 accccggacaccccacttattcatcttaaaggtgaatttctttagccactaggctac 5901812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 11837047 - 11837103
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacct 75  Q
    |||||||||||| ||||||||||| ||| |||||||| ||||||||||||||||||||    
T  11837047 accccggacacctcacttattcaccttataaagtgaa-ttctagccactaggctacct 11837103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 32527114 - 32527073
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttcta 60  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  32527114 accccagacaacccacttattcactttaaaagtgaatttcta 32527073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 11133134 - 11133193
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| |||||||||||||| ||||||||    
T  11133134 accccggacaccccacttattcaccttataaggtgaa-ttctagccactaggttacctgac 11133193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 32891339 - 32891398
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  ||| ||| |||| |||||||||||||||||||||||    
T  32891339 accccggacaccccacttattcatcttataagatgaa-ttctagccactaggctacctgac 32891398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 13019284 - 13019327
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagcca 64  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||    
T  13019284 cccggacacaccacttattcaccttaaaggtgaatttctagcca 13019327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 3037659 - 3037602
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctg 76  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||| ||||||||||||||    
T  3037659 accccggacaccccacttattcaccttataaggtgaatt-ctaggcactaggctacctg 3037602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 3179388 - 3179441
Alignment:
Q  25 gacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  3179388 gacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 3179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23403364 - 23403418
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctac 73  Q
    ||||||||  |||||||||||||| ||||| |||||||| |||||| ||||||||    
T  23403364 accccggattccccacttattcaccttaaaggtgaatttatagccattaggctac 23403418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 23405257 - 23405309
Alignment:
Q  19 accccggacaccccacttattcactttaaaa--gtgaatttctagccactagg 69  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||| ||||    
T  23405257 accctggacaccccacttattcaccttaaaaaggtgaatttctagccattagg 23405309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 19208910 - 19208863
Alignment:
Q  22 ccggacaccccacttattcactttaaaa--gtgaatttctagccacta 67  Q
    ||||||||| ||||||||||||||||||  ||||||||||| ||||||    
T  19208910 ccggacacctcacttattcactttaaaaatgtgaatttctaaccacta 19208863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 19905692 - 19905633
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||||| |||||||||| ||| ||| |||||| ||||||| |||||||||||||    
T  19905692 accccggacacccgacttattcaccttataaggtgaatt-ctagccattaggctacctgac 19905633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 32943401 - 32943456
Alignment:
Q  23 cggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||| ||| ||||| ||||| |||||||||| |||||||||    
T  32943401 cggacaccccacttattcaccttataaagtaaattt-tagccactagactacctgac 32943456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 34018103 - 34018048
Alignment:
Q  23 cggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||| ||| ||| |||||| ||| |||||||||||||||||    
T  34018103 cggacaccccacttattcaccttataaggtgaatt-ctaaccactaggctacctgac 34018048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 34107554 - 34107613
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||  || || |||||||  ||||||||||||||||| ||||    
T  34107554 cccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgac 34107613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 7134 - 7193
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7134 accccggacaccccatttattcactttaaaagtgaatttctagccactaggctacctgac 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 4841 - 4784
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4841 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacttgac 4784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 9e-21; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 24397003 - 24397062
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24397003 accctggacaccctacttattcactttaaaagtgaatttctagccactaggctacctgac 24397062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 31475877 - 31475821
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 75  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31475877 acccctgacaccccacttattcactttaaaagtgaatttctagccactagactacct 31475821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 41139147 - 41139204
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  41139147 cccggacacttcacttattcactttaaaagtgaatttctagccactaggctacttgac 41139204  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 19126795 - 19126847
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggct 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  19126795 accccggacaccccacttattcactttaaaagtgaatttctaacgactaggct 19126847  T

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Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 28914914 - 28914853
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||    
T  28914914 accccggacaccccacttattcactttaaaggtgaatttctctagccactaggctacttgac 28914853  T

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Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 14818395 - 14818355
Alignment:
Q  26 acaccccacttattcactttaaaagtgaatttctagccact 66  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14818395 acaccccacttattcactttaaaagtgaatttctagccact 14818355  T

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Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 15265393 - 15265353
Alignment:
Q  26 acaccccacttattcactttaaaagtgaatttctagccact 66  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15265393 acaccccacttattcactttaaaagtgaatttctagccact 15265353  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 41417312 - 41417253
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||    
T  41417312 accccagacaccccacttattcactttaaaagtgaatttttagccattagactacttgac 41417253  T

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Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 47635112 - 47635166
Alignment:
Q  23 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  47635112 cggacacctcatttattcactttaaaa-tgaatttctagccactaggctacctgac 47635166  T

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Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 4169134 - 4169193
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  4169134 accccggacaccccacttattcaccttataaagtgaa-ttctagccactaggttacctgac 4169193  T

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Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 34948164 - 34948223
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  34948164 accccggacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 34948223  T

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Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 48258221 - 48258160
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    ||||||||||||||| |||||||| || ||||||||||  ||||||| ||||||||||||||    
T  48258221 accccggacaccccatttattcacctttaaagtgaatttgtctagccgctaggctacctgac 48258160  T

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Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 21285390 - 21285334
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacct 75  Q
    |||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||    
T  21285390 accccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacct 21285334  T

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Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 24304313 - 24304272
Alignment:
Q  26 acaccccacttattcactttaaaagtgaatttctagccacta 67  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  24304313 acaccccatttattcactttaaaagtaaatttctagccacta 24304272  T

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Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 29658309 - 29658250
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||||    
T  29658309 accccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacttgac 29658250  T

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Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 33202591 - 33202532
Alignment:
Q  19 accccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  ||| ||| |||||| |||||||||||||||||||||    
T  33202591 accccggacaccccacttattcatcttataaggtgaatt-ctagccactaggctacctgac 33202532  T

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Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 3961445 - 3961384
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||| |||||||||||| |||||| |||||||  |||||| |||||||||| ||||    
T  3961445 accccggacatcccacttattcattttaaaggtgaatttctctagctactaggctacttgac 3961384  T

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Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 8859781 - 8859830
Alignment:
Q  26 acaccccacttattcactttaaaa--gtgaatttctagccactaggctac 73  Q
    ||||| ||||||||||| ||||||  ||||||||||||||||||||||||    
T  8859781 acacctcacttattcaccttaaaatggtgaatttctagccactaggctac 8859830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 38451923 - 38451980
Alignment:
Q  21 cccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||| ||| || ||||| ||||||||||||| |||||||||    
T  38451923 cccggacaccccacttattcacattataaggtgaa-ttctagccactagactacctgac 38451980  T

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Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 48433747 - 48433686
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  || || |||||||  ||||||||||||||||| ||||    
T  48433747 accccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgac 48433686  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 22706062 - 22706006
Alignment:
Q  22 ccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||| |||||||||||||||    
T  22706062 ccggacaccccacttattcaccttataagatgaatt-ctagctactaggctacctgac 22706006  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 3889837 - 3889797
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttct 59  Q
    |||||||||||||||||||||||  ||||| ||||||||||    
T  3889837 accccggacaccccacttattcatcttaaaggtgaatttct 3889797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 14102519 - 14102578
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| ||||| | |||||||||||||||    
T  14102519 accccggacaccccacttattcaccttataaggtgaa-ttctaactactaggctacctgac 14102578  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 14412536 - 14412595
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| ||||| | |||||||||||||||    
T  14412536 accccggacaccccacttattcaccttataaggtgaa-ttctaactactaggctacctgac 14412595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 14707350 - 14707390
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttct 59  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  14707350 accccggacaccccacttattcacctttatagtgaatttct 14707390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 27907929 - 27907874
Alignment:
Q  23 cggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||  ||| ||| ||||||| ||||||||||||||||||||    
T  27907929 cggacaccccacttattcatcttataaggtgaattt-tagccactaggctacctgac 27907874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 37129392 - 37129340
Alignment:
Q  23 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 75  Q
    |||||||||||||||||||| ||| |||  || ||||||||| ||||||||||    
T  37129392 cggacaccccacttattcaccttataaggtaaattctagccagtaggctacct 37129340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 38378277 - 38378317
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttct 59  Q
    ||||||||||||||||||||||| ||| || ||||||||||    
T  38378277 accccggacaccccacttattcatttttaaggtgaatttct 38378317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 47552271 - 47552330
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||| |||||||||| ||| || ||||| |||||||||| ||||||||||||    
T  47552271 accccggacaccctacttattcaccttataaggtgaa-ttctagccaccaggctacctgac 47552330  T

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Target: scaffold0227 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 21909 - 21965
Alignment:
Q  21 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  21909 cccgaacaccccacttattcactttaaaa-tgaatttctagccactagactacctgac 21965  T

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Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 17968 - 17913
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacc 74  Q
    ||||| ||||| ||||||||||||||||||| |||||| ||||||||||| |||||    
T  17968 accccagacactccacttattcactttaaaattgaattcctagccactagactacc 17913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 108398 - 108340
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 77  Q
    |||||||||||||||||||||||||||||||   || ||||||||| ||| ||||||||    
T  108398 accccggacaccccacttattcactttaaaaagtaaattctagccagtagactacctga 108340  T

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Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 31233 - 31277
Alignment:
Q  33 acttattcactttaaaagtgaatttctagccactaggctacctgac 78  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||    
T  31233 acttattcactttaaaagtgaattt-tagccactagactacctgac 31277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 12627 - 12666
Alignment:
Q  23 cggacaccccacttattcactttaaaagtgaatttctagc 62  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  12627 cggataccccatttattcactttaaaagtgaatttctagc 12666  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 419770 - 419831
Alignment:
Q  19 accccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||  || || |||||||  ||||||||||||||||| ||||    
T  419770 accccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgac 419831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 2546 - 2605
Alignment:
Q  19 accccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 78  Q
    |||||||||||||||||||||||| ||| || ||||| ||| ||||||||| |||||||||    
T  2546 accccggacaccccacttattcaccttataaggtgaa-ttccagccactagactacctgac 2605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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