View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11702_high_4 (Length: 511)
Name: NF11702_high_4
Description: NF11702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11702_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 485; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 1 - 493
Target Start/End: Complemental strand, 36940101 - 36939609
Alignment:
| Q |
1 |
acctatagagcttcagccccaagtcatttctcttagttaaggacatcttatccaagcttggcaaatgggcaggcagtcgaatcgaacctcattaaagaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
36940101 |
acctatagagcttcagccccaagtcatttctcttagttaaggacatcttatccaagcttggcaaatgggcaggcagtcgaatagaacctcattaaagaaa |
36940002 |
T |
|
| Q |
101 |
ggaaactccttattcccaggccctcccaaagtctgccttgaagaggaagtttctattcaatctatagctatcaaataaatcacatatatattctcttggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36940001 |
ggaaactccttattcccaggccctcccaaagtctgccttgaagaggaagtttctattcaatctatagctatcaaataaatcacatatatattctcttggg |
36939902 |
T |
|
| Q |
201 |
aagaagagacacacacatgtggtaggaagggaagacagaaagaatagaattcatgatcaggttcatttcaattttcttcaaattattacaaatatattcc |
300 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36939901 |
aagaagagacacacacatgtggtaagaagggaagacagaaagaatagaattcatgatcaggttcatttcaattttcttcaaattattacaaatatattcc |
36939802 |
T |
|
| Q |
301 |
atccatttttgagcttctattgcacaatttgtccacgacactatcaaaatcattgaagcatatttagtcttgatatcaaatcccaagtgtttcctaatat |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36939801 |
atccatttttgagcttctattgcacaatttgtccacgacactatcaaaatcattgaagcatatttagtcttgatatcaaatcccaagtgtttcctaatat |
36939702 |
T |
|
| Q |
401 |
gactaatcacaaaaatcttactctatcaaattttaagacaatatctacaaataatttctactctagaacctacatataattcaaggagtgtat |
493 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36939701 |
gactaatcacaaaaatcttactctatcaaattttaagacaatatctacaaataatttctactctagaacctacatataattcaaggagtgtat |
36939609 |
T |
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