View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11703_high_104 (Length: 233)
Name: NF11703_high_104
Description: NF11703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11703_high_104 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 47116798 - 47116595
Alignment:
| Q |
1 |
aagggtatgaggaagcttggagtggtgtccatctattgtggaaggattggggattcgttcattaacataacatcattgaatgagatgtatgacgtggaaa |
100 |
Q |
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| T |
47116798 |
aagggtatgaggaagcttggagtggtgtccatctattgtggaaggattggggattcgttcattaacataacatcattgaatgagatgtatgacgtggaac |
47116699 |
T |
|
| Q |
101 |
ttttctttgtaactgtctccccgaactttcagtaattaataccacaattagcacaaataatttctttcattttctctttccttaccagttttccaccaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
47116698 |
ttttctttgtaactgtctccccgaactttcagtaattaataccacaattagcacaaataatttctttcattttctctttccttaccagttttccaccaaa |
47116599 |
T |
|
| Q |
201 |
taat |
204 |
Q |
| |
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|||| |
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| T |
47116598 |
taat |
47116595 |
T |
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