View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11703_high_31 (Length: 446)
Name: NF11703_high_31
Description: NF11703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11703_high_31 |
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Alignment Details
Target: chr7 (Bit Score: 421; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 1 - 429
Target Start/End: Complemental strand, 36931207 - 36930779
Alignment:
| Q |
1 |
aagtttaagataagagaaccaaccatgtaccaacattggtcaaagatgtacggaactcaatgggaatcctacataggaattagcaacctagttaaggttg |
100 |
Q |
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| T |
36931207 |
aagtttaagataagagaaccaaccatgtaccaacattggtcaaagatgtatggaactcaatgggaatcctacataggaattagcaacctagttaaggttg |
36931108 |
T |
|
| Q |
101 |
ttgggtcagaccaaattgttggatcagaacagatgagttttgagccaatcaaatcaccctgcaacaacattgtcactacaaattttcaaggtcaaacacc |
200 |
Q |
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| T |
36931107 |
ttgggtcagaccaaattgttggatcagaacagatgagttttgagccaatcaaatcaccctgcaacaacattgtcactacaaattttcaaggtcaaacacc |
36931008 |
T |
|
| Q |
201 |
ccatgagggttttggtgcagtgagtgtagccaaaatcaaaaaccatggtagttttcaagctgaagaatattgtgatgaggatgagattgaagttcctggt |
300 |
Q |
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| T |
36931007 |
ccatgagggttttggtgcagtgagtgtagccaaaatcaaaaaccatggtagttttcaagctgaagaatattatgatgaggatgagattgaagttcctggt |
36930908 |
T |
|
| Q |
301 |
tggtgttttgatcagtttccaaagataacagaccctccaatgctgaattgtcaagcccatggaggagataattttacaaactccttgtactctgttgatg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36930907 |
tggtgttttgatcagtttccaaagataacagaccctccaatgctgaattgtcaagcccatggaggagataattttacaaactccttgtactctgttgatg |
36930808 |
T |
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| Q |
401 |
aatctttgttgtctaacagtgcagatagt |
429 |
Q |
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| T |
36930807 |
aatctttgttgtctaacagtgcagatagt |
36930779 |
T |
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