View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11703_high_97 (Length: 238)

Name: NF11703_high_97
Description: NF11703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11703_high_97
NF11703_high_97
[»] chr3 (64 HSPs)
chr3 (1-237)||(55163942-55164178)
chr3 (81-237)||(1017122-1017277)
chr3 (80-237)||(1687729-1687885)
chr3 (80-237)||(53925886-53926042)
chr3 (73-237)||(21564574-21564737)
chr3 (80-237)||(35346378-35346534)
chr3 (86-237)||(20759984-20760134)
chr3 (80-237)||(22852074-22852229)
chr3 (83-237)||(27070649-27070802)
chr3 (79-237)||(29677554-29677711)
chr3 (80-237)||(21656596-21656752)
chr3 (80-237)||(21890248-21890404)
chr3 (80-237)||(31122740-31122896)
chr3 (110-237)||(20813378-20813504)
chr3 (66-237)||(51562240-51562410)
chr3 (79-237)||(37248034-37248191)
chr3 (80-237)||(41250964-41251120)
chr3 (109-237)||(38446554-38446681)
chr3 (139-237)||(33151774-33151872)
chr3 (99-237)||(35608057-35608194)
chr3 (140-237)||(42016951-42017048)
chr3 (102-235)||(50287646-50287778)
chr3 (81-237)||(53196092-53196246)
chr3 (80-237)||(1448642-1448795)
chr3 (78-237)||(10618386-10618543)
chr3 (102-237)||(40922094-40922228)
chr3 (139-237)||(38923963-38924061)
chr3 (139-237)||(47329140-47329238)
chr3 (139-237)||(52821014-52821112)
chr3 (79-237)||(19268599-19268761)
chr3 (80-237)||(26455660-26455815)
chr3 (169-237)||(36314967-36315035)
chr3 (109-237)||(42107035-42107162)
chr3 (139-237)||(20086279-20086377)
chr3 (80-237)||(32650727-32650883)
chr3 (93-237)||(44798345-44798488)
chr3 (178-237)||(19664619-19664678)
chr3 (68-186)||(1016879-1016996)
chr3 (140-237)||(48651326-48651423)
chr3 (109-237)||(20913690-20913817)
chr3 (109-237)||(20921808-20921935)
chr3 (102-237)||(45380189-45380324)
chr3 (182-237)||(12748469-12748524)
chr3 (195-237)||(50364908-50364950)
chr3 (153-229)||(33473218-33473294)
chr3 (80-160)||(50287384-50287463)
chr3 (80-192)||(51475431-51475541)
chr3 (73-192)||(1687491-1687609)
chr3 (80-186)||(28699532-28699637)
chr3 (80-134)||(33151905-33151959)
chr3 (195-237)||(51475267-51475309)
chr3 (80-213)||(44152775-44152907)
chr3 (80-192)||(21564343-21564454)
chr3 (102-194)||(47473099-47473190)
chr3 (139-186)||(3697051-3697098)
chr3 (75-134)||(28193243-28193302)
chr3 (80-127)||(50364814-50364861)
chr3 (163-237)||(3697224-3697298)
chr3 (81-194)||(39069574-39069687)
chr3 (163-237)||(39069804-39069878)
chr3 (195-237)||(50977942-50977984)
chr3 (195-237)||(51081074-51081116)
chr3 (139-192)||(33473422-33473475)
chr3 (80-165)||(36315211-36315295)
[»] chr1 (75 HSPs)
chr1 (79-237)||(25988177-25988334)
chr1 (78-237)||(7651740-7651898)
chr1 (84-237)||(50690021-50690173)
chr1 (80-237)||(19315718-19315874)
chr1 (75-237)||(28425265-28425426)
chr1 (80-237)||(48802238-48802394)
chr1 (80-237)||(9878691-9878847)
chr1 (81-237)||(12143150-12143303)
chr1 (80-233)||(24204378-24204530)
chr1 (80-237)||(37216974-37217130)
chr1 (80-237)||(46051528-46051684)
chr1 (78-237)||(23767320-23767477)
chr1 (80-237)||(7552923-7553079)
chr1 (80-237)||(25800720-25800875)
chr1 (80-237)||(43396753-43396909)
chr1 (80-237)||(46825609-46825765)
chr1 (81-237)||(5400948-5401103)
chr1 (80-235)||(19274639-19274792)
chr1 (80-235)||(26069972-26070126)
chr1 (102-237)||(46095004-46095138)
chr1 (99-237)||(23228119-23228257)
chr1 (80-237)||(33325805-33325961)
chr1 (80-237)||(36781079-36781235)
chr1 (74-237)||(7608668-7608829)
chr1 (109-237)||(49094647-49094774)
chr1 (109-237)||(49814378-49814505)
chr1 (102-237)||(16705948-16706082)
chr1 (102-237)||(38473555-38473689)
chr1 (82-237)||(44978677-44978831)
chr1 (80-237)||(45670393-45670550)
chr1 (80-237)||(26549466-26549622)
chr1 (80-237)||(33674095-33674251)
chr1 (81-237)||(21929604-21929758)
chr1 (102-237)||(45350646-45350778)
chr1 (78-237)||(18781994-18782152)
chr1 (78-237)||(21965143-21965301)
chr1 (139-237)||(18892407-18892505)
chr1 (80-237)||(36157584-36157740)
chr1 (80-237)||(9962829-9962985)
chr1 (153-237)||(48669375-48669459)
chr1 (153-237)||(50533461-50533545)
chr1 (102-237)||(6711518-6711652)
chr1 (102-237)||(40721421-40721555)
chr1 (139-237)||(8141452-8141549)
chr1 (163-237)||(41106094-41106168)
chr1 (84-237)||(52147071-52147223)
chr1 (138-237)||(33714325-33714424)
chr1 (80-230)||(18917609-18917758)
chr1 (179-237)||(41982240-41982298)
chr1 (79-186)||(22351031-22351137)
chr1 (79-186)||(52146839-52146945)
chr1 (79-197)||(12964750-12964867)
chr1 (163-237)||(52349913-52349987)
chr1 (140-237)||(17983864-17983961)
chr1 (140-236)||(52067617-52067713)
chr1 (78-160)||(19274375-19274456)
chr1 (195-237)||(30281709-30281751)
chr1 (169-235)||(34971160-34971226)
chr1 (84-134)||(52349864-52349914)
chr1 (194-235)||(9974922-9974963)
chr1 (78-131)||(25800459-25800512)
chr1 (79-160)||(41105833-41105913)
chr1 (139-192)||(49814205-49814258)
chr1 (74-186)||(16505138-16505249)
chr1 (84-187)||(12142916-12143018)
chr1 (195-234)||(16506809-16506848)
chr1 (80-186)||(16508118-16508222)
chr1 (195-237)||(33194672-33194714)
chr1 (195-237)||(48319067-48319109)
chr1 (139-192)||(9974747-9974800)
chr1 (79-192)||(46825346-46825458)
chr1 (78-127)||(50533199-50533248)
chr1 (139-191)||(12964551-12964603)
chr1 (79-127)||(18782365-18782413)
chr1 (77-161)||(37216711-37216794)
[»] chr8 (42 HSPs)
chr8 (93-237)||(3875986-3876129)
chr8 (80-237)||(36399976-36400133)
chr8 (79-237)||(37933720-37933877)
chr8 (82-237)||(9056247-9056401)
chr8 (73-237)||(22683888-22684051)
chr8 (78-237)||(35884335-35884493)
chr8 (80-237)||(2533350-2533508)
chr8 (80-237)||(260055-260211)
chr8 (80-237)||(513385-513541)
chr8 (80-237)||(655710-655866)
chr8 (80-237)||(841445-841601)
chr8 (80-237)||(38107177-38107333)
chr8 (80-235)||(13797168-13797322)
chr8 (81-235)||(440920-441073)
chr8 (80-237)||(35443389-35443545)
chr8 (80-235)||(23972201-23972356)
chr8 (80-237)||(15847190-15847346)
chr8 (82-237)||(12010627-12010784)
chr8 (80-230)||(41536434-41536583)
chr8 (80-237)||(28496262-28496418)
chr8 (80-237)||(43806440-43806596)
chr8 (162-237)||(39513327-39513402)
chr8 (80-237)||(33651919-33652075)
chr8 (153-237)||(1293564-1293648)
chr8 (153-237)||(24193109-24193193)
chr8 (153-237)||(38208831-38208914)
chr8 (140-237)||(36218747-36218843)
chr8 (81-224)||(42988135-42988276)
chr8 (84-233)||(4649232-4649380)
chr8 (79-192)||(22684171-22684283)
chr8 (80-237)||(24430478-24430634)
chr8 (195-237)||(7434964-7435006)
chr8 (163-237)||(28707435-28707509)
chr8 (195-237)||(29485364-29485406)
chr8 (139-237)||(38633675-38633773)
chr8 (170-230)||(40301889-40301949)
chr8 (195-237)||(23935311-23935353)
chr8 (80-191)||(6016052-6016162)
chr8 (72-165)||(43806772-43806867)
chr8 (119-192)||(2533158-2533230)
chr8 (79-160)||(35443128-35443207)
chr8 (80-160)||(15846956-15847035)
[»] chr5 (54 HSPs)
chr5 (79-237)||(41282420-41282577)
chr5 (80-237)||(16095867-16096023)
chr5 (80-235)||(6252052-6252206)
chr5 (82-237)||(11935523-11935677)
chr5 (80-237)||(19659408-19659564)
chr5 (80-237)||(38964021-38964177)
chr5 (80-237)||(43166177-43166332)
chr5 (78-237)||(35342258-35342416)
chr5 (80-237)||(14717683-14717840)
chr5 (80-236)||(1052612-1052767)
chr5 (109-237)||(6739891-6740018)
chr5 (102-237)||(8689650-8689783)
chr5 (80-237)||(6600043-6600199)
chr5 (80-237)||(11000635-11000791)
chr5 (84-237)||(20079170-20079321)
chr5 (80-237)||(28078312-28078468)
chr5 (80-235)||(20408613-20408767)
chr5 (102-237)||(31710360-31710494)
chr5 (78-237)||(39824634-39824791)
chr5 (139-237)||(27457162-27457260)
chr5 (139-237)||(39001990-39002088)
chr5 (109-237)||(4015810-4015937)
chr5 (80-235)||(8215980-8216134)
chr5 (139-237)||(23128877-23128976)
chr5 (81-235)||(3351910-3352063)
chr5 (139-237)||(30863331-30863428)
chr5 (139-237)||(42993596-42993694)
chr5 (140-237)||(14952402-14952499)
chr5 (101-237)||(26593208-26593343)
chr5 (157-237)||(11692130-11692210)
chr5 (93-237)||(33760390-33760533)
chr5 (169-237)||(40075028-40075096)
chr5 (122-237)||(30297697-30297812)
chr5 (79-160)||(43166504-43166584)
chr5 (93-237)||(19398113-19398256)
chr5 (80-235)||(27116006-27116160)
chr5 (102-237)||(30208331-30208465)
chr5 (80-171)||(8215718-8215808)
chr5 (80-218)||(6332873-6333010)
chr5 (195-237)||(16752194-16752236)
chr5 (80-186)||(38964302-38964406)
chr5 (140-237)||(8694944-8695041)
chr5 (74-191)||(30863094-30863210)
chr5 (80-134)||(33760739-33760793)
chr5 (80-160)||(30297993-30298072)
chr5 (163-237)||(27510049-27510123)
chr5 (195-237)||(445032-445074)
chr5 (195-237)||(26035367-26035409)
chr5 (139-192)||(20517063-20517116)
chr5 (139-192)||(40074855-40074908)
chr5 (75-160)||(41282155-41282239)
chr5 (80-160)||(4016117-4016196)
chr5 (80-160)||(19661875-19661954)
chr5 (80-160)||(27116338-27116417)
[»] chr7 (59 HSPs)
chr7 (80-237)||(44544487-44544643)
chr7 (80-237)||(47219223-47219379)
chr7 (80-235)||(48628885-48629039)
chr7 (80-237)||(47294198-47294354)
chr7 (81-237)||(221353-221508)
chr7 (78-237)||(1469398-1469556)
chr7 (80-237)||(47272059-47272215)
chr7 (80-237)||(11476463-11476619)
chr7 (98-227)||(42888937-42889065)
chr7 (139-237)||(8162677-8162775)
chr7 (80-237)||(37393904-37394061)
chr7 (80-237)||(2960547-2960703)
chr7 (93-237)||(38427483-38427626)
chr7 (80-235)||(30876339-30876493)
chr7 (82-236)||(7336139-7336291)
chr7 (80-237)||(31684041-31684197)
chr7 (80-237)||(35600029-35600185)
chr7 (79-237)||(30798275-30798431)
chr7 (80-237)||(42979245-42979401)
chr7 (169-237)||(33884397-33884465)
chr7 (80-235)||(41113457-41113612)
chr7 (94-237)||(43752697-43752839)
chr7 (139-237)||(23842383-23842481)
chr7 (80-235)||(47120071-47120227)
chr7 (100-237)||(11050188-11050324)
chr7 (79-192)||(23842151-23842263)
chr7 (80-237)||(45723398-45723554)
chr7 (153-237)||(44800389-44800473)
chr7 (153-237)||(47281103-47281187)
chr7 (102-237)||(47579016-47579150)
chr7 (73-192)||(42888715-42888833)
chr7 (81-237)||(40851352-40851507)
chr7 (153-237)||(43968238-43968322)
chr7 (80-237)||(41139315-41139475)
chr7 (79-192)||(47294474-47294586)
chr7 (80-230)||(5106127-5106275)
chr7 (163-237)||(27364328-27364402)
chr7 (180-237)||(29248420-29248477)
chr7 (140-237)||(30971908-30972004)
chr7 (79-192)||(40851129-40851241)
chr7 (195-237)||(3797544-3797586)
chr7 (179-237)||(4923294-4923352)
chr7 (153-237)||(18353222-18353306)
chr7 (80-192)||(31684317-31684428)
chr7 (80-168)||(39033879-39033966)
chr7 (80-192)||(47119838-47119949)
chr7 (195-234)||(27774189-27774228)
chr7 (80-131)||(47271800-47271851)
chr7 (80-134)||(1469762-1469816)
chr7 (79-173)||(25801472-25801565)
chr7 (80-186)||(27772983-27773088)
chr7 (82-160)||(29739521-29739598)
chr7 (80-194)||(30972122-30972234)
chr7 (195-237)||(37354284-37354326)
chr7 (80-134)||(43968528-43968582)
chr7 (84-134)||(45233468-45233518)
chr7 (78-134)||(34378512-34378569)
chr7 (79-192)||(45233641-45233753)
chr7 (101-134)||(48628644-48628677)
[»] chr4 (65 HSPs)
chr4 (80-237)||(28264721-28264877)
chr4 (80-237)||(31591153-31591309)
chr4 (80-237)||(49118689-49118845)
chr4 (81-237)||(55517094-55517248)
chr4 (78-237)||(24458536-24458694)
chr4 (80-237)||(25730318-25730475)
chr4 (79-237)||(50276044-50276201)
chr4 (80-237)||(15985088-15985243)
chr4 (93-237)||(44490397-44490540)
chr4 (79-237)||(19496008-19496165)
chr4 (83-237)||(23134916-23135069)
chr4 (80-237)||(33807688-33807843)
chr4 (77-237)||(31973669-31973828)
chr4 (80-235)||(5227470-5227624)
chr4 (84-235)||(12196549-12196699)
chr4 (80-237)||(33173927-33174083)
chr4 (80-237)||(42273880-42274036)
chr4 (80-236)||(9339031-9339185)
chr4 (102-237)||(31208822-31208956)
chr4 (79-237)||(28812193-28812350)
chr4 (74-237)||(40988711-40988869)
chr4 (80-237)||(4544893-4545048)
chr4 (80-237)||(26017501-26017657)
chr4 (84-237)||(48149577-48149729)
chr4 (80-237)||(48551671-48551827)
chr4 (102-237)||(48707662-48707796)
chr4 (139-237)||(2055356-2055454)
chr4 (72-237)||(23553142-23553306)
chr4 (140-237)||(33693299-33693396)
chr4 (79-237)||(11795059-11795217)
chr4 (79-237)||(39995072-39995230)
chr4 (74-237)||(8881912-8882076)
chr4 (81-235)||(10588660-10588813)
chr4 (80-237)||(17847004-17847159)
chr4 (80-237)||(22298596-22298752)
chr4 (82-237)||(28159862-28160016)
chr4 (79-237)||(50542259-50542417)
chr4 (139-237)||(20534243-20534341)
chr4 (139-237)||(30141073-30141171)
chr4 (139-237)||(32118792-32118890)
chr4 (81-237)||(30466910-30467066)
chr4 (102-235)||(35930119-35930251)
chr4 (139-235)||(37381926-37382022)
chr4 (154-237)||(32318031-32318114)
chr4 (163-237)||(51371036-51371110)
chr4 (75-192)||(28264485-28264601)
chr4 (163-237)||(17993006-17993080)
chr4 (163-237)||(39700123-39700197)
chr4 (180-237)||(25734229-25734286)
chr4 (80-192)||(26017270-26017381)
chr4 (84-134)||(17992957-17993007)
chr4 (195-237)||(19168816-19168858)
chr4 (195-237)||(24623226-24623268)
chr4 (80-158)||(31590896-31590972)
chr4 (79-160)||(31208565-31208645)
chr4 (80-192)||(23135189-23135300)
chr4 (80-134)||(12196296-12196350)
chr4 (195-237)||(42549643-42549685)
chr4 (139-192)||(48149404-48149457)
chr4 (81-186)||(49118459-49118563)
chr4 (79-151)||(9339379-9339450)
chr4 (80-160)||(17847368-17847447)
chr4 (79-131)||(25734495-25734547)
chr4 (102-186)||(48707922-48708005)
chr4 (139-191)||(51371262-51371314)
[»] chr2 (62 HSPs)
chr2 (80-237)||(2456088-2456244)
chr2 (79-235)||(12759656-12759811)
chr2 (78-237)||(9276652-9276810)
chr2 (79-237)||(36444134-36444291)
chr2 (80-237)||(37838375-37838531)
chr2 (81-237)||(14630692-14630846)
chr2 (73-237)||(33106869-33107032)
chr2 (74-237)||(771877-772038)
chr2 (76-237)||(41500405-41500565)
chr2 (78-237)||(8899760-8899917)
chr2 (80-235)||(37732100-37732254)
chr2 (78-237)||(40854687-40854845)
chr2 (71-237)||(2057004-2057168)
chr2 (80-237)||(36211124-36211281)
chr2 (81-237)||(7379041-7379195)
chr2 (80-237)||(27328662-27328818)
chr2 (93-237)||(19180499-19180642)
chr2 (139-238)||(25087761-25087860)
chr2 (80-237)||(2094318-2094473)
chr2 (80-237)||(2314882-2315038)
chr2 (80-237)||(11949333-11949489)
chr2 (80-237)||(17484457-17484613)
chr2 (80-237)||(28650333-28650489)
chr2 (139-237)||(16246158-16246256)
chr2 (80-237)||(23671719-23671874)
chr2 (80-237)||(42630040-42630196)
chr2 (153-237)||(33865246-33865330)
chr2 (102-237)||(921100-921234)
chr2 (102-213)||(28216893-28217003)
chr2 (139-237)||(17134307-17134404)
chr2 (140-237)||(1106525-1106622)
chr2 (102-225)||(9331846-9331968)
chr2 (163-237)||(29737826-29737900)
chr2 (139-237)||(34253220-34253318)
chr2 (139-237)||(38751126-38751224)
chr2 (82-230)||(43249321-43249468)
chr2 (75-237)||(3430527-3430687)
chr2 (102-200)||(41177964-41178061)
chr2 (109-237)||(45124197-45124324)
chr2 (139-237)||(7297199-7297297)
chr2 (80-160)||(23673117-23673196)
chr2 (69-160)||(7297476-7297566)
chr2 (195-237)||(8396572-8396614)
chr2 (199-237)||(37654186-37654224)
chr2 (81-134)||(9276393-9276446)
chr2 (81-134)||(9331584-9331637)
chr2 (80-161)||(28650671-28650751)
chr2 (80-151)||(33107222-33107292)
chr2 (80-134)||(920840-920894)
chr2 (195-237)||(19916008-19916050)
chr2 (80-134)||(31214086-31214140)
chr2 (139-176)||(3358157-3358194)
chr2 (139-192)||(3430807-3430860)
chr2 (139-192)||(11949612-11949665)
chr2 (81-134)||(33865536-33865589)
chr2 (80-165)||(41500732-41500816)
chr2 (80-192)||(772158-772268)
chr2 (79-131)||(2315246-2315298)
chr2 (84-160)||(8899504-8899579)
chr2 (80-160)||(12759993-12760072)
chr2 (79-159)||(41178264-41178343)
chr2 (80-192)||(42629803-42629914)
[»] chr6 (34 HSPs)
chr6 (79-233)||(2707541-2707694)
chr6 (80-237)||(1915251-1915406)
chr6 (80-237)||(30379095-30379251)
chr6 (78-237)||(9382597-9382755)
chr6 (79-237)||(29050350-29050508)
chr6 (80-237)||(6503796-6503952)
chr6 (140-237)||(17428238-17428335)
chr6 (73-237)||(1077315-1077478)
chr6 (80-235)||(8178156-8178310)
chr6 (76-235)||(25820452-25820610)
chr6 (79-237)||(17943114-17943271)
chr6 (139-237)||(2390343-2390441)
chr6 (80-237)||(2598007-2598162)
chr6 (80-237)||(3258714-3258871)
chr6 (79-235)||(3408269-3408425)
chr6 (80-237)||(12626714-12626870)
chr6 (80-237)||(26392916-26393072)
chr6 (102-237)||(10256315-10256449)
chr6 (80-237)||(31375995-31376153)
chr6 (80-237)||(16193388-16193544)
chr6 (140-232)||(12612937-12613029)
chr6 (117-237)||(11133951-11134072)
chr6 (80-237)||(26230840-26230995)
chr6 (80-235)||(6785008-6785159)
chr6 (139-237)||(26196286-26196385)
chr6 (194-237)||(35223919-35223962)
chr6 (80-134)||(35224160-35224214)
chr6 (79-160)||(1915587-1915667)
chr6 (79-192)||(2707305-2707417)
chr6 (109-237)||(10931084-10931210)
chr6 (139-237)||(12612813-12612911)
chr6 (80-134)||(26393278-26393332)
chr6 (195-237)||(26936685-26936727)
chr6 (80-160)||(1077052-1077131)
[»] scaffold0693 (1 HSPs)
scaffold0693 (79-237)||(4934-5090)
[»] scaffold0004 (1 HSPs)
scaffold0004 (82-237)||(218964-219118)
[»] scaffold0727 (1 HSPs)
scaffold0727 (72-237)||(5263-5427)
[»] scaffold0952 (1 HSPs)
scaffold0952 (81-237)||(3280-3434)
[»] scaffold0184 (1 HSPs)
scaffold0184 (153-237)||(13173-13257)
[»] scaffold0078 (1 HSPs)
scaffold0078 (153-237)||(59587-59671)
[»] scaffold0096 (1 HSPs)
scaffold0096 (139-234)||(48043-48138)
[»] scaffold0717 (1 HSPs)
scaffold0717 (138-237)||(1895-1994)
[»] scaffold1986 (1 HSPs)
scaffold1986 (163-237)||(192-266)
[»] scaffold0338 (1 HSPs)
scaffold0338 (79-186)||(5729-5835)
[»] scaffold1562 (1 HSPs)
scaffold1562 (163-237)||(617-691)
[»] scaffold1158 (1 HSPs)
scaffold1158 (163-237)||(1902-1976)
[»] scaffold0542 (1 HSPs)
scaffold0542 (195-237)||(1994-2036)
[»] scaffold0122 (2 HSPs)
scaffold0122 (80-134)||(11183-11237)
scaffold0122 (163-237)||(11436-11510)
[»] scaffold0031 (1 HSPs)
scaffold0031 (79-160)||(101245-101325)


Alignment Details
Target: chr3 (Bit Score: 166; Significance: 6e-89; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 55163942 - 55164178
Alignment:
Q  1 gcacatttacaaaccaacaaaataaaacatatataacataattaatatatgatctacaaacaaatactaattaattaatggtcaaatgtatgtaaaagt- 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||     
T  55163942 gcacatttacaaaccaacaaaataaaacatatataacataattaatatatgatctacaaacaaatactaattaattaatggtcaaatgcatctaaatgtc 55164041  T
Q  100 cttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgt 199  Q
    |||||||| |||||||||||||||||| ||||||| |  |||||||||||   |||||||| |||||||||||| |||||||||||||||||||||||||    
T  55164042 cttttaagtttttcatttttcccaaagccgtcctt-taagtttcaaaagtctcaaacaagtcattttaatttttgaattgtttcaaataagtcatattgt 55164140  T
Q  200 agataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  55164141 agatagcatagttgctaattgcttccttgaactcatct 55164178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 1017277 - 1017122
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| |||||||||| |||||||||||||||||||||||||| |  ||||||||||| | | |||||| |||||| ||||| ||| ||    
T  1017277 gtcaaatgcatctaaaggtcttttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccatacaagtcattttagtttttgaatcgt 1017179  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  1017178 ttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 1017122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 1687885 - 1687729
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||| ||||||||||||| |  ||||||||||||  ||||||||  ||||||||||| ||| |    
T  1687885 ggtcaaatgcatctaaaggtcctttaagtttttcatttttctcaaagtcgtcctt-taagtttcaaaagtttcaaacaagtccttttaatttttgaatcg 1687787  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  1687786 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 1687729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 53925886 - 53926042
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||  || |  ||||||||||||| |||||||| |||||| ||||| |||      
T  53925886 ggtcaaatgtatctaaaggtcatttaagtttttcatttttcccaaagtggttatt-taagtttcaaaagttccaaacaagtcattttagtttttgaatca 53925984  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  53925985 tttcaaataagtcatattgtagatagtatagttggtaattgcttcattgaactcatct 53926042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 237
Target Start/End: Complemental strand, 21564737 - 21564574
Alignment:
Q  73 aattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttt 172  Q
    |||||| ||||||||| || ||||  || |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | |||||||| |||||| ||||    
T  21564737 aattaaaggtcaaatgcatctaaagatcctttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtcattttagtttt 21564639  T
Q  173 taaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    | ||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  21564638 tgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 21564574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 35346378 - 35346534
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||| | || |||| ||| |||||| ||||||||||||| ||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  35346378 ggtcaaacgcatctaaaggtcctttaagtttttcatttttcctaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 35346476  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  35346477 tttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 35346534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 20759984 - 20760134
Alignment:
Q  86 atgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaa 185  Q
    |||||| |||| ||| || ||| |||||||||||||||||||||||||| |  |||||||||||   |||||| |  ||||| ||||| ||| |||||||    
T  20759984 atgtatataaaggtccttgaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaaatccttttagtttttgaatcgtttcaa 20760082  T
Q  186 ataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    | ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  20760083 acaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 20760134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 22852229 - 22852074
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||| ||| ||||||||||||  |||||||||||| |  ||||||| ||||| ||||||||  ||||| ||||| || |     
T  22852229 ggtcaaatgcatctaaaggtcttt-aagtttttcatttttcttaaagtcgtcctt-taagtttcaacagttctaaacaagtccttttagtttttgaaatc 22852132  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  22852131 tttcaaataagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 22852074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 27070649 - 27070802
Alignment:
Q  83 caaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgttt 182  Q
    |||||| || |||| ||| |||||  ||||||||||| |||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| ||||    
T  27070649 caaatgcatataaaggtcctttaaatttttcattttttccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgttt 27070747  T
Q  183 caaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  27070748 caaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatct 27070802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 29677711 - 29677554
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||| | ||||||||   |||| ||||| |||     
T  29677711 tggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccgtttagtttttcaatc 29677613  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| | ||| ||| ||||||| |||||||  |||||||||||||||||||||||    
T  29677612 gtttcaaacaggtcctatcgtagatatcatagtttgtaattgcttccttgaactcatct 29677554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 21656752 - 21656596
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||| ||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  21656752 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 21656654  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||| ||| |||||||| |||||||||||||||||||||||    
T  21656653 tttcaaacaagtcctattgtatatagcatagttggtaattgcttccttgaactcatct 21656596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 21890404 - 21890248
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| ||||| |||||  |||| | |||||| |  ||||||||||||| ||||||||  ||||| ||||| ||| |    
T  21890404 ggtcaaatgcatctaaaagtcctttaagtttttcgtttttttcaaaatggtcctt-taagtttcaaaagttccaaacaagtccttttagtttttgaatcg 21890306  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||| ||||||||||| ||| |||||||||||||||||||||||    
T  21890305 tttcaaacaagtcctattatagataacatatttggtaattgcttccttgaactcatct 21890248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 31122896 - 31122740
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||  ||||| |||||||||||||  ||||| |  |||||||||||   |||||||| |||||| ||||| ||| |    
T  31122896 ggtcaaatgcatctaaaggtcctttaactttttcgtttttcccaaagtgatcctt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatcg 31122798  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  31122797 tttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatct 31122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 20813378 - 20813504
Alignment:
Q  110 tttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacata 209  Q
    |||||||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |||||||| |||||||| |||||||| ||||    
T  20813378 tttcatttttcccaaagtggtcctt-taagtttcaaaagtcctaaacaagtccttttagtttttgaatcgtttcaaacaagtcataatgtagatagcata 20813476  T
Q  210 gttgttaattgcttccttgaactcatct 237  Q
     ||| |||||||||||||||||||||||    
T  20813477 attggtaattgcttccttgaactcatct 20813504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 51562410 - 51562240
Alignment:
Q  66 actaattaattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattt 165  Q
    |||||| | |||| ||||||||| || |||||||  |||||| ||||| ||||||| ||||| |||||| || |||||||||||   || |||||  |||    
T  51562410 actaataacttaaaggtcaaatgcatctaaaagttctttaagtttttcgtttttcctaaagtggtcctt-tgagtttcaaaagtctcaagcaagtccttt 51562312  T
Q  166 taatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||| |||||||| ||||  || ||||||||||||||||| |||||| ||||||||||||||||    
T  51562311 taatttttgaatcgtttcaaacaagttctaatgtagataacatagttggtaattgtttccttgaactcatct 51562240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 37248191 - 37248034
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||  || |||| |||||||||| ||||| ||||| | ||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| |||     
T  37248191 tggtcaaatacatctaaatgtcttttaagtttttcgttttttctaaagtggtcctt-taagtttcaaaagtctcaaacaagtacttttagtttttgaatc 37248093  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  37248092 gtttcaaacaagtcctattgtagataacatagttggtaattgcttcattgaactcatct 37248034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 41251120 - 41250964
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| |||| |||| | ||||||| |||||| |  |||||||| || | ||| ||||  ||||| ||||| |||||    
T  41251120 ggtcaaatgcatctaaaagtcctttaagttttttatttcttccaaagtggtcctt-taagtttcaaaggtcccaaataagtccttttagtttttgaattg 41251022  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  41251021 tttcaaacaagtcttattgtagatagcatagttggtaattgtttccttgaactcatct 41250964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 38446681 - 38446554
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    ||||| ||||| ||||||| |||||| |  |||| |||||||| ||| ||||  ||||| ||||| ||| |||||||| ||||||||||||||||| |||    
T  38446681 ttttcgttttttccaaagtggtcctt-taagttttaaaagttccaaagaagtgcttttagtttttgaatcgtttcaaacaagtcatattgtagatagcat 38446583  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||||||||||||||||||    
T  38446582 agttggtaattgcttccttgaactcatct 38446554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 33151872 - 33151774
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| | ||||||||  ||||| ||||| ||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  33151872 gtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactaatct 33151774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 237
Target Start/End: Original strand, 35608057 - 35608194
Alignment:
Q  99 tcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattg 198  Q
    ||||||||| |||||||||| || ||||||||| || |  ||||||||| |   |||||||| |||||| ||||| ||| |||||||||||||| |||||    
T  35608057 tcttttaagtttttcattttgcctaaagtcgtcatt-taagtttcaaaaatgtcaaacaagtcattttagtttttgaatcgtttcaaataagtcctattg 35608155  T
Q  199 tagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| |||| ||| |||||| ||||||||||||||||    
T  35608156 tagatagcataattggtaattggttccttgaactcatct 35608194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 42017048 - 42016951
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||  ||||| ||  ||||| ||||| ||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  42017048 tttcaaaagtttcaaacaggtccttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttcattgaactcatct 42016951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 50287778 - 50287646
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| |||||||||||| ||||||||||||| |  |||||||||||   | |||||| |||||| ||||| ||| |||||||| ||||| ||||||||    
T  50287778 tttaagtttttcatttttctcaaagtcgtcctt-taagtttcaaaagtctcatacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtag 50287680  T
Q  202 ataacatagttgttaattgcttccttgaactcat 235  Q
    ||| |||||||| |||||||||| || |||||||    
T  50287679 atagcatagttggtaattgcttcattaaactcat 50287646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 53196246 - 53196092
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| ||| |||||| ||||| ||||||| ||||| |||||| |  |||||||||||   |||||||| |||||| |||| || | ||    
T  53196246 gtcaaatgcatctaaaggtcctttaagtttttcgtttttccgaaagtggtcctt-taagtttcaaaagtctcaaacaagtcattttagttttgaa-tcgt 53196149  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||||| |||||||||||||||||||| |||||  ||||||||||||||||    
T  53196148 ttcaaagaagtcttattgtagataacatagttggtaattatttccttgaactcatct 53196092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 1448642 - 1448795
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| |||||| ||||||  ||||| |  ||||||||||| | ||||||||| ||||| ||||| ||| |    
T  1448642 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtgatcctt-taagtttcaaaagtaccaaacaagttcttttagtttttgaatcg 1448740  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||   || |||||||| |||||||||||||||||||||||    
T  1448741 tttcaaagaagtcctattgt---taccatagttggtaattgcttccttgaactcatct 1448795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 237
Target Start/End: Original strand, 10618386 - 10618543
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| ||| |||||| ||||| |||| ||||||||  || || | |||||||||||| | ||||||||  ||||| ||||| |||    
T  10618386 atggtcaaatgcatctaaaggtcctttaagtttttcgtttt-cccaaagtgatcttt-tatgtttcaaaagtcctaaacaagtccttttagtttttgaat 10618483  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| |||||||||| ||||| ||| |||||||||| ||||||||||||    
T  10618484 cgtttcaaacaagtcctattgtagatgacataattggtaattgcttcattgaactcatct 10618543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 40922094 - 40922228
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||||||||||| ||||| ||| || |  |||||||||||   ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||    
T  40922094 tttaagtttttcatttttcctaaagtggtcttt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcgtattgtag 40922192  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||| ||||| |||||||||||||||||    
T  40922193 atagcatagttggtaattacttccttgaactcatct 40922228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 38923963 - 38924061
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| | |||||||| |||||| ||||| |||||||||||| ||||| ||| |||||||| ||||||| |||||||||| ||||||| ||||    
T  38923963 gtttcaaaagtcccaaacaagtcattttagtttttgaattgtttcaaacaagtcctatcgtagataaaatagttggtaattgcttcgttgaacttatct 38924061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 47329140 - 47329238
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   ||||||||  ||||||||||| ||| ||||| || ||||||||| ||||||| |||||||| |||||||||||||||||||||||    
T  47329140 gtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttccaacaagtcatatcgtagatagcatagttggtaattgcttccttgaactcatct 47329238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 52821014 - 52821112
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||| ||||||||  ||||| ||||| ||| |||| ||| ||||| | |||||||||||||||||| |||||||||| ||||||||||||    
T  52821014 gtttcaaaagttccaaacaagtctttttagtttttgaatcgttttaaacaagtcctgttgtagataacatagttggtaattgcttctttgaactcatct 52821112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 19268761 - 19268599
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| |||||| ||| ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||||||||| ||||| |||     
T  19268761 tggtcaaatgcatctaaaggtcttt-aagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagttattttagtttttgaatc 19268664  T
Q  179 gtttcaaataagtcatattgtagat------aacatagttgttaattgcttccttgaactcatct 237  Q
    |||| ||| ||||| || |||||||      |||||||||| |||||||||| ||||||||||||    
T  19268663 gttttaaacaagtcctaatgtagataacaataacatagttggtaattgcttcattgaactcatct 19268599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 26455815 - 26455660
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| || ||||||| ||||  ||||||| ||||| |||||| |  |||||||||||   || |||||  ||||| ||||| ||| |    
T  26455815 ggtcaaatgcatctaaaggt-ttttaagtttttggtttttcctaaagtggtcctt-taagtttcaaaagtctcaaccaagtccttttagtttttgaatcg 26455718  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  26455717 tttcaaacaagtcatgttgtagatagcatagttggtaattgcttccttgaactcatct 26455660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 36314967 - 36315035
Alignment:
Q  169 tttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  36314967 tttttgaattgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 36315035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 42107035 - 42107162
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    ||||||||||| |||||| ||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |||||||| ||||| |||||||||||  ||    
T  42107035 ttttcattttttccaaagccgtcctt-taagtttcaaaagtcacaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagtat 42107133  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| |||||||||||||||||    
T  42107134 agttggtaattacttccttgaactcatct 42107162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 20086279 - 20086377
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   ||||||||| ||||| ||||| ||| |||||||| ||||| |||| |||||| |||| ||| |||||||||||||||||||||||    
T  20086279 gtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtcctattatagatagcatacttggtaattgcttccttgaactcatct 20086377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 32650727 - 32650883
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||| | ||||| |||||| |  ||||||||||||  |||||| |  ||||| ||||| |||      
T  32650727 ggtcaaatggatctaaatgtcatttaagtttttcgttttttctaaagtggtcctt-taagtttcaaaagtttcaaacaattctttttagtttttgaatca 32650825  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||  |||| |||||| |||||||| |||||||||||||||||||||||    
T  32650826 tttcaaacaagttctattatagatagcatagttggtaattgcttccttgaactcatct 32650883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 44798488 - 44798345
Alignment:
Q  93 taaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    |||| ||| |||||| |||| |||||||||||||| || ||| |  ||||||||| |   | ||||||  ||||| ||||| ||| |||||||| |||||    
T  44798488 taaaggtcctttaagttttttatttttcccaaagtggtgctt-taagtttcaaaattctcatacaagtccttttagtttttgaatcgtttcaaacaagtc 44798390  T
Q  193 atattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     ||||||||||| |||||||| ||||||||| |||||||||||||    
T  44798389 ctattgtagatagcatagttggtaattgctttcttgaactcatct 44798345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 19664678 - 19664619
Alignment:
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  19664678 tgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 19664619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 1016879 - 1016996
Alignment:
Q  68 taattaattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttatttta 167  Q
    ||||||| ||| ||||||||| || |||| ||| |||||| ||||| |||||||||||||||||||| |  ||||||||||| | ||||||||  |||||    
T  1016879 taattaaataaaggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtcctttta 1016977  T
Q  168 atttttaaattgtttcaaa 186  Q
     ||||| ||| ||||||||    
T  1016978 gtttttgaatcgtttcaaa 1016996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 48651423 - 48651326
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||   ||||||||  ||||| ||||| ||| |||||||| ||||| || |||||||| |||||||| ||||||||||||| |||||||||    
T  48651423 tttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaagtcctaatgtagatagcatagttggtaattgcttccttaaactcatct 48651326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 20913690 - 20913817
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    ||||| ||||||||||||| ||| || |  |||||||||||   |||||| |  ||||| ||||| ||| |||||||| ||||  ||||||||||| |||    
T  20913690 ttttcgtttttcccaaagtggtcatt-taagtttcaaaagtctcaaacaaatctttttagtttttgaatcgtttcaaacaagttctattgtagatagcat 20913788  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||||| ||||||||||||    
T  20913789 agttgataattgcttctttgaactcatct 20913817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 20921808 - 20921935
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    ||||| ||||||||||||| ||| || |  |||||||||||   |||||| |  ||||| ||||| ||| |||||||| ||||  ||||||||||| |||    
T  20921808 ttttcgtttttcccaaagtggtcatt-taagtttcaaaagtctcaaacaaatctttttagtttttgaatcgtttcaaacaagttctattgtagatagcat 20921906  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||||| ||||||||||||    
T  20921907 agttgataattgcttctttgaactcatct 20921935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 45380189 - 45380324
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||| |||||||||||||  ||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |||||||| ||||  ||||||||    
T  45380189 tttaagtttttcgtttttcccaaagtgatcctt-taagtttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagttctattgtag 45380287  T
Q  202 ataacatag-ttgttaattgcttccttgaactcatct 237  Q
    ||| ||||| ||| |||||||||| || |||||||||    
T  45380288 atagcatagtttgataattgcttctttaaactcatct 45380324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 12748524 - 12748469
Alignment:
Q  182 tcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  12748524 tcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 12748469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 50364908 - 50364950
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  50364908 attgtagataacatagttggtaattgcttccttgaactcatct 50364950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 33473218 - 33473294
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttga 229  Q
    ||||||||  ||||| ||||| ||| |||||||| ||||  |||||||||||||||||||| |||||| ||||||||    
T  33473218 aaacaagtccttttagtttttgaatcgtttcaaacaagttttattgtagataacatagttggtaattgtttccttga 33473294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 50287384 - 50287463
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||| | ||||||||    
T  50287384 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagt 50287463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 51475541 - 51475431
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||| ||| ||||| ||||||||||||| |||||| |  ||||||||||||| ||||||||  ||||| ||||| ||| |    
T  51475541 ggtcaaatgcatctaaaggtcttt-aagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagttccaaacaagtccttttagtttttgaatcg 51475444  T
Q  180 tttcaaataagtc 192  Q
    ||||||| |||||    
T  51475443 tttcaaacaagtc 51475431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 1687491 - 1687609
Alignment:
Q  73 aattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttt 172  Q
    |||||| ||||||||| || |||| ||| |||||| ||||| ||||||||||||||||| || |  ||||||||||| | |||||| |  ||||| ||||    
T  1687491 aattaagggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcatt-taagtttcaaaagtcccaaacaaatccttttagtttt 1687589  T
Q  173 taaattgtttcaaataagtc 192  Q
    | ||| |||||||| |||||    
T  1687590 tgaatcgtttcaaacaagtc 1687609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 28699532 - 28699637
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||| ||| |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  28699532 ggtcaaatatatctaaaggtcatttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcctaaacaagtccttttagtttttgaatcg 28699630  T
Q  180 tttcaaa 186  Q
    |||||||    
T  28699631 tttcaaa 28699637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 33151959 - 33151905
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || |||| ||| |||||| ||||||||||||||||||||||||||    
T  33151959 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt 33151905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 51475267 - 51475309
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  51475267 attgtagatagcatagttggtaattgcttccttgaactcatct 51475309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 44152907 - 44152775
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| ||||||  || ||| |   |||||||| |   ||||||||  ||||| ||||| ||| |    
T  44152907 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagctgttctt-taaatttcaaaaatctcaaacaagtccttttagtttttgaatcg 44152809  T
Q  180 tttcaaataagtcatattgtagataacatagttg 213  Q
    ||||||| |||||||||| |||||||||||||||    
T  44152808 tttcaaacaagtcatattatagataacatagttg 44152775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 21564343 - 21564454
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| |||||||| |||| || ||| |  ||||||||||| | ||||||||| ||||| ||||| ||| |    
T  21564343 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccgaagtggttctt-taagtttcaaaagtcccaaacaagttcttttagtttttgaatcg 21564441  T
Q  180 tttcaaataagtc 192  Q
    ||||||| |||||    
T  21564442 tttcaaacaagtc 21564454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 194
Target Start/End: Original strand, 47473099 - 47473190
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcat 194  Q
    |||||| ||||| |||||||| |||| |||||| |  ||||||||||| ||||||||||  ||||| ||||| ||| |||||||| |||||||    
T  47473099 tttaagtttttcgtttttccctaagtggtcctt-taagtttcaaaagtccaaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 47473190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 3697051 - 3697098
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaa 186  Q
    ||||||||||||| ||||||||| ||||| ||||| ||||||||||||    
T  3697051 gtttcaaaagttccaaacaagttcttttagtttttgaattgtttcaaa 3697098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 28193243 - 28193302
Alignment:
Q  75 ttaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||||||||||| |||| ||| |||||| |||||||||||| |||| | ||||||    
T  28193243 ttaatggtcaaatgtatctaaaggtcctttaagtttttcatttttctcaaaatagtcctt 28193302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 50364814 - 50364861
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagt 127  Q
    ||||||||| || |||| |||||||||| |||||||||||||||||||    
T  50364814 ggtcaaatgaatctaaaggtcttttaagtttttcatttttcccaaagt 50364861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 3697298 - 3697224
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| |||  ||||||| ||||| |||||||||||  ||||||| |||||||||| ||||| ||||||    
T  3697298 ttttagtttttgaatcctttcaaacaagtcctattgtagatagtatagttggtaattgcttcattgaattcatct 3697224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 39069574 - 39069687
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagctttt-catttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||| || |||| |||||||||| |||| | |||||| ||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  39069574 gtcaaatgcatctaaaggtcttttaagttttttcgtttttctcaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 39069672  T
Q  180 tttcaaataagtcat 194  Q
    ||||||| |||||||    
T  39069673 tttcaaacaagtcat 39069687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 39069878 - 39069804
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| ||||||||||||  ||| |||||||| |||||| |||||| |||| ||||    
T  39069878 ttttagtttttgaatcgtttcaaacaagtcatattgttaatagcatagttgataattgtttcctttaacttatct 39069804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 50977984 - 50977942
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| || ||||||||||||||||||||    
T  50977984 attgtagatagcatagttggtagttgcttccttgaactcatct 50977942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 51081116 - 51081074
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| || ||||||||||||||||||||    
T  51081116 attgtagatagcatagttggtagttgcttccttgaactcatct 51081074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 33473475 - 33473422
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    ||||||||||| | |||||||| |||||| ||||| |||||||||||| |||||    
T  33473475 gtttcaaaagtcccaaacaagtcattttagtttttgaattgtttcaaacaagtc 33473422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 36315295 - 36315211
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattt 165  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | |||||||| ||||    
T  36315295 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtcattt 36315211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 25988177 - 25988334
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||| |  ||||||||||||| ||||||||  ||||| ||||| |||     
T  25988177 tggtcaaatgtatgtaaaggtcttttaagtttttcattttttccaaaatcgtcctt-taagtttcaaaagttccaaacaagtccttttagtttttgaatc 25988275  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  25988276 gtttcaaacaagtcctattgtagatagcatagttggtaattggttccttgaactcatct 25988334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 7651898 - 7651740
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| |||    
T  7651898 atggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaat 7651800  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  7651799 cgtttcaaacaagtcatattgtagatagcatagttgataattgcttcattgaactcatct 7651740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 84 - 237
Target Start/End: Complemental strand, 50690173 - 50690021
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttc 183  Q
    ||||| || |||| |||||||||| |||||||||||||||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |||||    
T  50690173 aaatgcatctaaaggtcttttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttc 50690075  T
Q  184 aaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  50690074 aaacaagtcatattgtagataacatagttggtaattgcttcattgaactcatct 50690021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 19315874 - 19315718
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| |||||||||||  |||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  19315874 ggtcaaatgcatctaaaagtcctttaagtttttcatttttttcaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 19315776  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  19315775 tttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 19315718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 28425265 - 28425426
Alignment:
Q  75 ttaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattttta 174  Q
    |||| ||||||||| || |||| ||| |||||| ||||||||||| |||||||||||||| |  ||||||||||| | ||||||||  ||||| |||||     
T  28425265 ttaaaggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttg 28425363  T
Q  175 aattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||| ||||| ||||| ||||| |||||||| |||||||||||||||||||||||    
T  28425364 aatcgtttcaaacaagtcctattgcagatagcatagttggtaattgcttccttgaactcatct 28425426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 48802238 - 48802394
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||| ||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  48802238 ggtcaaatgcatctaaaggtcctttaagtttttcatttttctcaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 48802336  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||||||||    
T  48802337 tttcaaacaagtcttattgtagatagcatagttggtaattgcttcattgaactcatct 48802394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 9878691 - 9878847
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||  ||| |||||| ||||| ||||||||||||| ||| || |  ||||||||||| | ||| ||||| ||||| ||||| ||| |    
T  9878691 ggtcaaatgcatctaactgtcctttaagtttttcgtttttcccaaagtggtcatt-taagtttcaaaagtcccaaataagttcttttagtttttgaatcg 9878789  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  9878790 tttcaaacaagtcatattgtagataaaatagttggtaattgcttccttgaactcatct 9878847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 12143303 - 12143150
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| |||||| ||| ||||||||||| ||||||||||| ||| ||  |||||||||   ||||||||  ||||| ||||| ||| ||    
T  12143303 gtcaaatgcatctaaaggtcttt-aagtttttcattttttccaaagtcgtctttaagt--ttcaaaagtctcaaacaagtccttttagtttttgaatcgt 12143207  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  12143206 ttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatct 12143150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 233
Target Start/End: Original strand, 24204378 - 24204530
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||| ||| |  ||||||||||| | ||||||||  ||||| ||||| | | |    
T  24204378 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgttctt-taagtttcaaaagtcccaaacaagtccttttagtttttgagtcg 24204476  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactc 233  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||    
T  24204477 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactc 24204530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 37217130 - 37216974
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| || | ||||||||| |  ||||||||||| | |||||||| |||||| ||||| ||| |    
T  37217130 ggtcaaatgcatctaaaggtcctttaagtttttcattttttcctaggtcgtcctt-taagtttcaaaagtcccaaacaagtcattttagtttttgaatcg 37217032  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  37217031 tttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaactcatct 37216974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 46051684 - 46051528
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  46051684 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 46051586  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| | ||||||||| |||||||| |||||||||||||||||||||||    
T  46051585 tttcaaacaagtcctgttgtagatagcatagttggtaattgcttccttgaactcatct 46051528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 237
Target Start/End: Original strand, 23767320 - 23767477
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    |||||||||||||| ||||  || |||||| ||||||||||||| ||||| |||||| |  |||||||||||   |||||| |  ||||| ||||| |||    
T  23767320 atggtcaaatgtatctaaagatcctttaagtttttcatttttcctaaagtggtcctt-taagtttcaaaagtctcaaacaa-tccttttagtttttgaat 23767417  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  23767418 cgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 23767477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 7552923 - 7553079
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| | | |||||| ||||||||||| ||||| | ||| || |  |||||||| || | ||||||||  ||||| ||||| ||| |    
T  7552923 ggtcaaatgcatttaaagggcctttaagtttttcattttttccaaaatggtcttt-taagtttcaaaggtcccaaacaagtccttttagtttttgaatcg 7553021  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7553022 tttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcatct 7553079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 25800875 - 25800720
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||| || ||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  25800875 ggtcaaatgcatctaaaggtcctttaagtttttctttttttccgaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 25800777  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  25800776 tttcaaacaagtcttattgtagataacat-gttggtaattgcttccttgaactcatct 25800720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 43396909 - 43396753
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| |||||||||||| ||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  43396909 ggtcaaatgcatctaaaagtcctttaagtttttcatttttctcaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 43396811  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| || || || |||||||| || ||||| |||||||||||||||||||||||    
T  43396810 tttcaaacaaatcctactgtagatagcagagttgataattgcttccttgaactcatct 43396753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 46825765 - 46825609
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||  || |||| ||| |||||| ||||| ||||||||||| |||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  46825765 ggtcaaatacatctaaaggtcctttaagtttttcctttttcccaaactcgtcctt-taagtttcaaaagtcccaaacaagtctttttagtttttgaatcg 46825667  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||||||    
T  46825666 tttcaaacaagtcctattgtagatagcataattggtaattgcttccttgaactcatct 46825609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 5401103 - 5400948
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||||||| |||||| ||||| ||||| ||||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| |||  |    
T  5401103 gtcaaatgcatctaaaagtcctttaagtttttcgttttttccaaagtggtcctt-taagtttcaaaagtctcaaacaagtctttttagtttttgaatctt 5401005  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  5401004 ttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 5400948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 19274792 - 19274639
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||| | | |||||||||| | |  ||||||||||| | ||||||||  ||||| ||||||||| |    
T  19274792 ggtcaaatgcatctaaaggtcctttaagtttttcatttcttc-aaagtcgtccgt-taagtttcaaaagtcccaaacaagtccttttagtttttaaatcg 19274695  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||    
T  19274694 tttcaaacaagtcctattgtagataacatagctggtaattgcttccttgaactcat 19274639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 26070126 - 26069972
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| ||| |||||  |||||||||||| ||||||||||||| |  |||||||||||   ||| || |  ||||| ||||| ||| |    
T  26070126 ggtcaaatgtatttaaaggtcctttaaatttttcatttttctcaaagtcgtcctt-taagtttcaaaagtctcaaagaaatccttttagtttttgaatcg 26070028  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  26070027 tttcaaacaagtcatattgtagatatcatagttggtaattgtttccttgaactcat 26069972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 46095004 - 46095138
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| |||||||||||  ||||||||||||| |  ||||||||| ||| ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||    
T  46095004 tttaagtttttcatttttttcaaagtcgtcctt-taagtttcaaaaattccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtag 46095102  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||| |||||| ||||||||||||||||    
T  46095103 atagcatagttggtaattgtttccttgaactcatct 46095138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 237
Target Start/End: Original strand, 23228119 - 23228257
Alignment:
Q  99 tcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattg 198  Q
    ||||||||| |||||||||||| ||||||  ||||| |  ||||||||||| |  |||||||  ||||| ||||| ||| |||||||| ||||  |||||    
T  23228119 tcttttaagtttttcatttttctcaaagtgatccttttaagtttcaaaagtccctaacaagtccttttagtttttgaatcgtttcaaacaagtactattg 23228218  T
Q  199 tagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  23228219 tagatagcatagttggtaattgcttccttgaactcatct 23228257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 33325961 - 33325805
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||| |||| || |||| ||| |||||| ||||| ||||| ||||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  33325961 ggtcgaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 33325863  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  33325862 tttcaaacaagtcctattgtagataacatagttggtaattgcttccttaaactcatct 33325805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 36781079 - 36781235
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||||||| ||||| |||||   ||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  36781079 ggtcaaatgcatctaaaggtcttttaagtttttcgtttttttgaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 36781177  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  36781178 tttcaaacaagtcttattgtagatatcatagttggtaattgcttccttgaactcatct 36781235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 7608668 - 7608829
Alignment:
Q  74 attaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattttt 173  Q
    ||||| |||||||||||| ||||||||||||||| ||||| |||||  |||||| ||| |||  |  ||||||| | | ||||||||  ||||| |||||    
T  7608668 attaaaggtcaaatgtatctaaaagtcttttaagtttttcgtttttttcaaagtggtctttaaat--ttcaaaaatcccaaacaagtccttttagttttt 7608765  T
Q  174 aaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     ||| |||||||| ||||| |||| |||||| |||||||| |||||||||| ||||||||||||    
T  7608766 gaatcgtttcaaacaagtcctattatagatagcatagttgataattgcttctttgaactcatct 7608829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 49094647 - 49094774
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    ||||||||||||| |||||  ||||| |  |||||||||||   |||||||| |||||| ||||| ||| |||||||| ||||| ||||||||||| |||    
T  49094647 ttttcatttttcctaaagtgatcctt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcat 49094745  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||||||||||||||||||    
T  49094746 agttggtaattgcttccttgaactcatct 49094774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 49814505 - 49814378
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    ||||| |||||||||||||  |||| ||  |||||||||||   ||||||||  ||||| ||||| ||| ||||||||||||||||||| |||||| |||    
T  49814505 ttttcgtttttcccaaagtgatcct-ataagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaataagtcatattctagatagcat 49814407  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||||||||||||||||||    
T  49814406 agttggtaattgcttccttgaactcatct 49814378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 16706082 - 16705948
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||| ||||||| ||||| |||||| |  ||||||||| ||  ||||||||  ||||| ||||| ||| |||||||| ||||| |||| |||    
T  16706082 tttaagtttttcgtttttcctaaagtggtcctt-taagtttcaaaaatttcaaacaagtccttttagtttttgaatcgtttcaaacaagtcttattttag 16705984  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||| |||||||||||||||||||||||    
T  16705983 ataacatagttggtaattgcttccttgaactcatct 16705948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 38473555 - 38473689
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||| ||||||||||||| || ||| |  |||||||||||   ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||    
T  38473555 tttaagtttttcgtttttcccaaagtggtactt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtag 38473653  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||| |||||||||||||||||||||||    
T  38473654 atatcatagttggtaattgcttccttgaactcatct 38473689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 44978677 - 44978831
Alignment:
Q  82 tcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtt 181  Q
    ||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |||    
T  44978677 tcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtt 44978775  T
Q  182 tcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||| | |||||||| |||| ||| |||||||||||||||||| ||||    
T  44978776 tcaaacaagtcagaatgtagatagcataattgataattgcttccttgaacttatct 44978831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 45670393 - 45670550
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || ||||  || |||||| ||||| ||||| ||||||| |||||| |  ||||||||||| | ||| ||||  ||||| ||||| ||| |    
T  45670393 ggtcaaatgcatctaaagatcctttaagtttttcgttttttccaaagtggtcctt-taagtttcaaaagtcccaaataagtccttttagtttttgaatcg 45670491  T
Q  180 tttcaaataagtcatattgtagataacatag-ttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||||    
T  45670492 tttcaaacaagtcctattgtagataacatagtttggtaattgcttccttgaactcatct 45670550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 26549622 - 26549466
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||| ||| |||| ||  ||||||  |||||||||||  |||||||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  26549622 ggtcaaatatatctaaaggtactttaagtgtttcatttttcttaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 26549524  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| ||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  26549523 ttttaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 26549466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 33674251 - 33674095
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| |||||||||  ||||||||||||  ||||| || ||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  33674251 ggtcaaatgtatttaaaggtcttttaaatttttcatttttcttaaagtggttctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 33674153  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    | ||||| ||||| ||||||||||| ||||| || |||||||||||||||||||||||    
T  33674152 tgtcaaacaagtcctattgtagatagcatagctggtaattgcttccttgaactcatct 33674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 21929758 - 21929604
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| |||||| ||| ||||| ||||| | ||||| |||||| |  |||||||||||   ||||||||  ||||||||||| ||| ||    
T  21929758 gtcaaatgcatctaaaggtcttt-aagtttttcgttttttctaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttaatttttgaatcgt 21929661  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||||  ||||||||||| |||||||| |||||||||||||||||||||||    
T  21929660 ttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaactcatct 21929604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 45350646 - 45350778
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| |||||||||||  ||||||||||||| |  |||||||||||   ||||||||  ||||||||||| ||| |||||||| ||  | ||||||||    
T  45350646 tttaagtttttcatttttttcaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttcaaacaa--cctattgtag 45350742  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||| ||||||||||||||| |||||||    
T  45350743 ataacatagttggtaattgcttccttgatctcatct 45350778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 237
Target Start/End: Original strand, 18781994 - 18782152
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| ||| |||||| ||||| |||||  |||||| || ||| | |||||||||||| | ||||||||  ||||| ||||| |||    
T  18781994 atggtcaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtggttctt-tatgtttcaaaagtcccaaacaagtccttttagtttttgaat 18782092  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
      ||||||| |||||||||| |||||| |||||||| |||||||||  ||||||||||||    
T  18782093 catttcaaacaagtcatattctagatagcatagttgataattgcttatttgaactcatct 18782152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 21965301 - 21965143
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||  || |||| ||| |||||| ||||| |||||||||||||  ||||| |  ||||||||||| | ||||||||  ||||| ||||| |||    
T  21965301 atggtcaaatacatctaaaggtcctttaagtttttcgtttttcccaaagtgatcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaat 21965203  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| |||||||||| ||||| ||| |||||||||| || |||||||||    
T  21965202 cgtttcaaacaagtcctattgtagatgacataattggtaattgcttcattaaactcatct 21965143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 18892505 - 18892407
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||| ||| ||||  ||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||||||||    
T  18892505 gtttcaaaagttccaaaaaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttctttgaactcatct 18892407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 36157584 - 36157740
Alignment:
Q  80 ggtcaaatgtatgtaaaagtc-ttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||| ||||||| |||| ||| ||||||  ||||| ||||||||||||| |||||| |  |||||||||||   |||||||| |||||| ||||| |||     
T  36157584 ggtcgaatgtatctaaatgtccttttaaatttttcgtttttcccaaagtggtcctt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatc 36157682  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||||||||||| |||| |||  ||||||||||||||||||||||    
T  36157683 gtttcaaacaagtcctattgtagatagcataattg-gaattgcttccttgaactcatct 36157740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 9962985 - 9962829
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| |||||| |||||| |||||| |  |||||||||||   ||| ||||  ||||| ||||| ||| |    
T  9962985 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttctcaaagtggtcctt-taagtttcaaaagtctcaaagaagtccttttagtttttgaatcg 9962887  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||  | ||||||||| |||||||| |||||||||||||||||||||||    
T  9962886 tttcaaacaagttctgttgtagatagcatagttggtaattgcttccttgaactcatct 9962829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 48669375 - 48669459
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||  ||||||||||| ||| |||||||| ||||| ||||||||||| |||||||| | |||||||||||||||||||||    
T  48669375 aaacaagtccttttaatttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtgattgcttccttgaactcatct 48669459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 50533545 - 50533461
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||  ||||| ||||||||| |||||||| ||||| |||| ||||||||||||||| |||||||||| ||||||||||||    
T  50533545 aaacaagtccttttagtttttaaatcgtttcaaacaagtcctattatagataacatagttggtaattgcttcattgaactcatct 50533461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 6711652 - 6711518
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| |||||||||||  |||| | |||||| |  |||||||||||   ||||||||  |||| |||||| ||| |||||||| ||||||||||||||    
T  6711652 tttaagtttttcatttttttcaaaatggtcctt-taagtttcaaaagtctcaaacaagtcctttttatttttgaatcgtttcaaacaagtcatattgtag 6711554  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    | |  ||||||| |||||||||||||||||||||||    
T  6711553 acattatagttggtaattgcttccttgaactcatct 6711518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 40721555 - 40721421
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||| |||||||||||||  ||||| |  |||||||||||   ||||||||  ||||| ||||| ||| ||||| || ||||| ||||||||    
T  40721555 tttaagtttttcgtttttcccaaagtgatcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttccaacaagtcctattgtag 40721457  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||| ||||||||| |||||||||||||    
T  40721456 atagcatagttgataattgctttcttgaactcatct 40721421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 8141452 - 8141549
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||| ||||||||| ||||| ||||| ||| |||||||| ||||| ||||||||||| |||| ||  |||||||||| ||||||||||||    
T  8141452 gtttcaaaagttccaaacaagtt-ttttagtttttgaatcgtttcaaacaagtcctattgtagatagcataatttgtaattgcttctttgaactcatct 8141549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 41106168 - 41106094
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  41106168 ttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 41106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 237
Target Start/End: Complemental strand, 52147223 - 52147071
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttc 183  Q
    ||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |   |||||||| |   ||||||||  ||||||||||| ||| |||||    
T  52147223 aaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctt-taaatttcaaaaatctcaaacaagtccttttaatttttgaatcgtttc 52147125  T
Q  184 aaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| ||||||| ||||| ||| |||||||  |||||||||| ||||||||||||    
T  52147124 aaacaagtcatgttgtatatagcatagtttgtaattgcttcattgaactcatct 52147071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 33714325 - 33714424
Alignment:
Q  138 tgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||| || | ||||||||  || || ||||| ||| |||||||| || || |||||||||||||||||||| |||||| ||||||||||||||||    
T  33714325 tgtttcaaatgtcccaaacaagtctttctagtttttgaatcgtttcaaacaaatcctattgtagataacatagttgataattgtttccttgaactcatct 33714424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 230
Target Start/End: Complemental strand, 18917758 - 18917609
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||  |||||| ||||| ||||||||||||| |||||| |  |||||| ||||   ||||||||  ||||| ||||| ||| |    
T  18917758 ggtcaaatgcatttaaaggttctttaagtttttcgtttttcccaaagtggtcctt-taagtttcataagtctcaaacaagtccttttagttttttaatcg 18917660  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaa 230  Q
    ||||||| || |||||||||||||| |||| ||  ||||||||||||||||    
T  18917659 tttcaaacaaatcatattgtagatagcatatttaataattgcttccttgaa 18917609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 41982240 - 41982298
Alignment:
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  41982240 gtttcaaacaagtcatattgtagataacatagttgataattacttctttgaactcatct 41982298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 22351031 - 22351137
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||  |||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||||    
T  22351031 tggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatt 22351129  T
Q  179 gtttcaaa 186  Q
    ||||||||    
T  22351130 gtttcaaa 22351137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 52146839 - 52146945
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | |||||||| |||||| ||||| |||     
T  52146839 tggtcaaatgcatctaaatgtcctttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtcattttagtttttgaatc 52146937  T
Q  179 gtttcaaa 186  Q
    ||||||||    
T  52146938 gtttcaaa 52146945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 197
Target Start/End: Complemental strand, 12964867 - 12964750
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||||||| |||||| ||||||||||||||||||| | || | |  ||||||||||| | ||||||||| ||||| ||||| |||     
T  12964867 tggtcaaatgcatctaaaagtcctttaagtttttcatttttcccaaagt-ggccatttaagtttcaaaagtcccaaacaagttcttttagtttttgaatc 12964769  T
Q  179 gtttcaaataagtcatatt 197  Q
    | |||||| ||||| ||||    
T  12964768 gattcaaacaagtcctatt 12964750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 52349913 - 52349987
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| ||||| ||||||| ||| |||||||| ||||||||||||| |||||||||    
T  52349913 ttttagtttttgaatcgtttcaaacaagtcctattgtaaatagcatagttggtaattgcttccttaaactcatct 52349987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 17983864 - 17983961
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||   ||||||||  ||||||||||| ||| |||||||  ||||| || |||| |||||||||||  |||||||||| ||||||||||||    
T  17983864 tttcaaaagtcttaaacaagtccttttaatttttgaatcgtttcaaccaagtcctaatgtaaataacatagtttgtaattgcttctttgaactcatct 17983961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 52067617 - 52067713
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatc 236  Q
    ||||||||||   ||||||||  ||||| ||||| ||| |||||||| ||||||| ||||||||  |||| ||  ||||||||||||||||||||||    
T  52067617 tttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatgttgtagatggcataatttgtaattgcttccttgaactcatc 52067713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 19274375 - 19274456
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||||| || |||| ||| |||||| ||||| |||||||||||||||||||| |  ||||||||||| | ||||||||    
T  19274375 atggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagt 19274456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 30281751 - 30281709
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  30281751 attgtagatagcatagttggtaattgcttccttgaactcatct 30281709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 34971226 - 34971160
Alignment:
Q  169 tttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||| ||| |||||||| ||||| || ||||||||||||||||| |||||| ||| ||||||||||    
T  34971226 tttttgaatcgtttcaaacaagtcctaatgtagataacatagttggtaattgtttctttgaactcat 34971160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 52349864 - 52349914
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    |||| ||| |||| |||||||||| ||||||||||||||||||||||||||    
T  52349864 aaatatatctaaaggtcttttaagtttttcatttttcccaaagtcgtcctt 52349914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 9974963 - 9974922
Alignment:
Q  194 tattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  9974963 tattgtagatagcatagttggtaattgcttccttgaactcat 9974922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 25800459 - 25800512
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtc 131  Q
    |||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||    
T  25800459 atggtcaaatgtatctaaaggtcctttaagtttttcgtttttcccaaagtcgtc 25800512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 41105833 - 41105913
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    |||||||||| || |||| ||| |||||| ||||| |||||||||||||||||||| |  ||||||||||| | ||||||||    
T  41105833 tggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagt 41105913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 49814205 - 49814258
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    ||||||||||||| ||||||||||||||| ||||| ||| |||||||| |||||    
T  49814205 gtttcaaaagttccaaacaagttattttagtttttgaatcgtttcaaacaagtc 49814258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 16505138 - 16505249
Alignment:
Q  74 attaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattttt 173  Q
    |||| |||||||||| || ||||  || |||||| ||||  |||||||| |||||||||| ||  ||||||||||| | ||||||||  ||||| |||||    
T  16505138 attattggtcaaatgcatctaaagatcctttaagtttttagtttttcccgaagtcgtcct-ataagtttcaaaagtcccaaacaagtccttttagttttt 16505236  T
Q  174 aaattgtttcaaa 186  Q
     ||||||||||||    
T  16505237 gaattgtttcaaa 16505249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 12142916 - 12143018
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttc 183  Q
    ||||| || |||| ||| |||||| ||||| |||||||||||||||| ||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |||||    
T  12142916 aaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgttctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttc 12143014  T
Q  184 aaat 187  Q
    ||||    
T  12143015 aaat 12143018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 16506809 - 16506848
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactca 234  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  16506809 attgtagatagcatagttggtaattgcttccttgaactca 16506848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 16508222 - 16508118
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||  |||||||||||||||||||| |  ||||||||||| | ||||||||  |||| | |||| |||||    
T  16508222 ggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtcctttt-agttttgaattg 16508125  T
Q  180 tttcaaa 186  Q
    |||||||    
T  16508124 tttcaaa 16508118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 33194672 - 33194714
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| || ||||||||||||||||||||    
T  33194672 attgtagatagcatagttggtagttgcttccttgaactcatct 33194714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 48319067 - 48319109
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||| |||||||| |||||||||||||||||||||||    
T  48319067 attgtatatagcatagttggtaattgcttccttgaactcatct 48319109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 9974747 - 9974800
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    ||||||||||||| ||||||||  ||||| ||||||||| |||||||| |||||    
T  9974747 gtttcaaaagttccaaacaagtccttttagtttttaaatcgtttcaaacaagtc 9974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 46825346 - 46825458
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||| ||||| || |||| ||| |||||| ||||| |||||| ||||||||||||| |  ||||||||||    ||||||||  ||||||||||| |||     
T  46825346 tggttaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtcgtcctt-taagtttcaaaagactcaaacaagtccttttaatttttgaatc 46825444  T
Q  179 gtttcaaataagtc 192  Q
    |||||||| |||||    
T  46825445 gtttcaaacaagtc 46825458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 50533199 - 50533248
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagt 127  Q
    |||||||||||||| |||| ||| |||||| ||||||||||| |||||||    
T  50533199 atggtcaaatgtatttaaaggtcctttaagtttttcattttttccaaagt 50533248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 12964551 - 12964603
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagt 191  Q
    |||||||||||   ||||||||| ||||||||||| |||||||||||| ||||    
T  12964551 gtttcaaaagtctcaaacaagttcttttaatttttgaattgtttcaaacaagt 12964603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 18782413 - 18782365
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagt 127  Q
    |||||||||| || |||||||| |||||| ||||| |||||||||||||    
T  18782413 tggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagt 18782365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 37216711 - 37216794
Alignment:
Q  77 aatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagtt 161  Q
    |||||||||||| || ||||  || |||||| ||||| |||||| ||||||||||||| |  ||||||||||| | |||||||||    
T  37216711 aatggtcaaatgcatctaaagttcctttaagtttttcgtttttctcaaagtcgtcctt-taagtttcaaaagtcccaaacaagtt 37216794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 3876129 - 3875986
Alignment:
Q  93 taaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    |||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||| | |||||||| |||||| ||||| ||| |||||||| |||||    
T  3876129 taaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 3876031  T
Q  193 atattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||||||||||||||| |||||||||||||||||||||||    
T  3876030 ctattgtagataacatagttggtaattgcttccttgaactcatct 3875986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 36399976 - 36400133
Alignment:
Q  80 ggtcaaatgtatgtaaaagtc-ttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    ||||||||| || |||| ||| ||||||| ||||| |||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| |||     
T  36399976 ggtcaaatgcatctaaaggtccttttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatc 36400074  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  36400075 gtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 36400133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 37933877 - 37933720
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||||||| |||||| |||||||||||||||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| |||     
T  37933877 tggtcaaatgcatctaaaagtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatc 37933779  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||| ||||||| |||||||| |||||||||||||||||||||||    
T  37933778 gtttcaaacaagtcttatcgtagatagcatagttggtaattgcttccttgaactcatct 37933720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 9056247 - 9056401
Alignment:
Q  82 tcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtc-cttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||||| |||| ||| |||||| ||||||||||| ||||||||||| |||| ||  ||||||||||  |||||| | |||||| ||||| ||||||    
T  9056247 tcaaatgtatctaaaggtcctttaagtttttcattttttccaaagtcgtctcttaagt--ttcaaaagtttcaaacaaatcattttagtttttgaattgt 9056344  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  9056345 ttcaaacaagtcctattgtagataacatagttggtaattgcttctttgaactcatct 9056401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 22683888 - 22684051
Alignment:
Q  73 aattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttt 172  Q
    |||||| ||||||||| || ||||  || |||||| |||||||||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||    
T  22683888 aattaaaggtcaaatgcatctaaagctcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttt 22683986  T
Q  173 taaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    | |||  ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  22683987 tgaatcatttcaaacaagtcatattgtagatatcatagttggtaattgtttccttgaactcatct 22684051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 237
Target Start/End: Original strand, 35884335 - 35884493
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| ||| |||||| ||||||||||||| | ||| ||||||| | |||||||| || | ||||||||  ||||| ||||| |||    
T  35884335 atggtcaaatgcatctaaaggtcctttaagtttttcatttttcctagagtggtcctta-gagtttcaaaggtcccaaacaagtccttttagtttttgaat 35884433  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  35884434 cgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactcatct 35884493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 2533508 - 2533350
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgt-gtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    ||||||||| || ||||| || |||||| ||||||||||| | |||||| ||||| |   ||||||||||| | |||||||| |||||| ||||| |||     
T  2533508 ggtcaaatgcatctaaaactcatttaagtttttcattttttcaaaagtcatcctttttaagtttcaaaagtcccaaacaagtcattttagtttttgaatc 2533409  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  2533408 gtttcaaacaagtcatattgtagatatcatagttggtaattgcttccttgaactcatct 2533350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 260211 - 260055
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| |||||||||||||| |  ||||||||| |   ||||||||  ||||| ||||| ||| |    
T  260211 ggtcaaatgcatctaaatgtcctttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaattctcaaacaagtccttttagtttttgaatcg 260113  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  260112 tttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 260055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 513541 - 513385
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| ||||||||||| |||||||||||||| |  |||||||||||   |||| |||  ||||| ||||| ||| |    
T  513541 ggtcaaatgcatctaaaagtcctttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaagtctcaaactagtccttttagtttttgaatcg 513443  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  513442 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 513385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 655710 - 655866
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| |||||||||||||| |  ||||||||| |   ||||||||  ||||| ||||| ||| |    
T  655710 ggtcaaatgcatctaaatgtcctttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaattctcaaacaagtccttttagtttttgaatcg 655808  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  655809 tttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 655866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 841445 - 841601
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| |||||||||||||| |  ||||||||| |   ||||||||  ||||| ||||| ||| |    
T  841445 ggtcaaatgcatctaaatgtcctttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaattctcaaacaagtccttttagtttttgaatcg 841543  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  841544 tttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 841601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 38107333 - 38107177
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||||| ||||||||||| |  ||||||||||| | ||| ||||  ||||| ||||| ||| |    
T  38107333 ggtcaaatgcatctaaatgtcctttaagtttttcatttttcccgaagtcgtcctt-taagtttcaaaagtcccaaaaaagtccttttagtttttgaatcg 38107235  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  38107234 tttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatct 38107177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 13797322 - 13797168
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||||||| |||||||||||||||||||||||||| |  |||||||||||   |||||||| |||||| ||||| ||| |    
T  13797322 ggtcaaatgcatctaaaggtcttttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatcg 13797224  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| || || ||||||| ||| |||||||| |||||||||| ||||||||||    
T  13797223 tttcaaacaaatcctattgtatatagcatagttggtaattgcttctttgaactcat 13797168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 441073 - 440920
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    ||||||||||| |||| ||| |||||| ||||||||||||| ||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| ||    
T  441073 gtcaaatgtatctaaaggtcctttaagtttttcatttttcctaaagttgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 440975  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    |||||| ||||| ||||||| ||| |||||||| |||||||||||||||||||||    
T  440974 ttcaaacaagtcctattgtatatagcatagttggtaattgcttccttgaactcat 440920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 35443545 - 35443389
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||  ||||| ||| |    
T  35443545 ggtcaaatgcatctaaaggtcctttaagattttcatttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtcctttttgtttttgaatcg 35443447  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||  ||||||||||| |||||||| |||||||||||||||||||||||    
T  35443446 tttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaactcatct 35443389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 23972201 - 23972356
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcattttt-cccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    ||||||||| || |||| ||| |||||| |||| |||||| |||||||| |||||| |  |||||||| || | ||||||||  ||||| ||||| |||     
T  23972201 ggtcaaatgcatataaaggtcctttaagttttttattttttcccaaagtggtcctt-taagtttcaaaggtcccaaacaagtccttttagtttttgaatc 23972299  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  23972300 gtttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcat 23972356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 15847346 - 15847190
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || | || || ||||||| ||||||||||||| ||||| |||||| |  |||||||||| || ||| ||||  ||||| ||||| ||| |    
T  15847346 ggtcaaatgcatcttaaggttttttaagtttttcatttttcctaaagtggtcctt-taagtttcaaaagctccaaataagtccttttagtttttgaatcg 15847248  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  15847247 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 15847190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 12010784 - 12010627
Alignment:
Q  82 tcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtt 181  Q
    ||||||| || |||| ||| |||||| ||||||||||||||||||| |||||| |  ||||||||||| | |||||||| |||||| ||||| |||||||    
T  12010784 tcaaatgcatctaaatgtcctttaagtttttcatttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtcattttagtttttgaattgtt 12010686  T
Q  182 tcaaataagtcatatt---gtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||||   ||||||| |||||||| |||||| | ||||||||||||||    
T  12010685 tcaaacaagtcctattgtagtagatagcatagttggtaattgttgccttgaactcatct 12010627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 230
Target Start/End: Original strand, 41536434 - 41536583
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||  |||||||||| || |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  41536434 ggtcaaatgcatctaaaggtcctttaagtttttcatttttttcaaagtcgtcttt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 41536532  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaa 230  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  41536533 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaa 41536583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 28496262 - 28496418
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||  |||||||||||   ||||| ||| || |  |||||||| || | ||||||||  ||||| ||||| ||| |    
T  28496262 ggtcaaatgcatctaaaagtcctttaaatttttcattttttataaagtggtcatt-taagtttcaaaggtcccaaacaagtccttttagtttttgaatcg 28496360  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  28496361 tttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatct 28496418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 43806440 - 43806596
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| ||  ||| ||| |||||| ||||| ||||||  ||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  43806440 ggtcaaatgcattcaaaggtcctttaagtttttcgtttttcttaaagtggtcctt-taagtttcaaaagtcgcaaacaagtccttttagtttttgaatcg 43806538  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  43806539 tttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 43806596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 39513327 - 39513402
Alignment:
Q  162 attttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| |||||||||||||||||||||||| || ||||||||||||||||| ||||||||| |||||||||||||    
T  39513327 attttagtttttaaattgtttcaaataagtcctaatgtagataacatagttggtaattgctttcttgaactcatct 39513402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 33652075 - 33651919
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||||| ||||| ||| || |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  33652075 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcctaaagtggtcttt-taagtttcaaaagtcccaaacaagtctttttagtttttgaatcg 33651977  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||| ||||||| |||||||  |||||| ||||||||||||||||    
T  33651976 tttcaaacaagtcctatcgtagatagcatagtttgtaattgtttccttgaactcatct 33651919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 1293648 - 1293564
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||  ||||| ||||| ||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  1293648 aaacaagtccttttagtttttgaatcgtttcaaacaagtcatgttgtagataacatagttggtaattgcttccttgaactcatct 1293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 24193109 - 24193193
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||  ||||| ||||| ||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  24193109 aaacaagtccttttagttttttaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatct 24193193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 38208914 - 38208831
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||| ||||| ||||| ||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  38208914 aaacaagtt-ttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttctttgaactcatct 38208831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 36218747 - 36218843
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||| |||||||| |||||| ||||| ||| |||||||| |||||||  ||||||||| ||||||| ||||||||| |||||||||||||    
T  36218747 tttcaaaagttctaaacaagtcattttagtttttgaatcgtttcaaacaagtcatgatgtagataatatagttgataattgctt-cttgaactcatct 36218843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 42988135 - 42988276
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    ||||||||||| |||| |||||| ||| ||||||||||| ||||||||||| || |  |||| ||||||   |||||| |  ||||| ||||| ||| ||    
T  42988135 gtcaaatgtatttaaaggtctttcaagtttttcattttttccaaagtcgtcatt-taagttttaaaagtctcaaacaaatccttttagtttttgaatcgt 42988233  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttc 224  Q
    |||||| ||||| |||||||||||| ||||||| ||||||||||    
T  42988234 ttcaaa-aagtcctattgtagataatatagttgataattgcttc 42988276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 233
Target Start/End: Complemental strand, 4649380 - 4649232
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttc 183  Q
    ||||| || |||| ||| || ||| ||||||||||||||||||  ||| || |  |||||||||||   |||||||| |||||| ||||| ||| |||||    
T  4649380 aaatgcatctaaaggtccttcaagtttttcatttttcccaaagcggtcatt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttc 4649282  T
Q  184 aaataagtcatattgtagataacatagttgttaattgcttccttgaactc 233  Q
    ||| |||||  |||||||||| |||| ||| |||||| ||||||||||||    
T  4649281 aaacaagtccaattgtagatagcataattggtaattgtttccttgaactc 4649232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 22684283 - 22684171
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||| |||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| |||     
T  22684283 tggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatc 22684185  T
Q  179 gtttcaaataagtc 192  Q
    |||||||| |||||    
T  22684184 gtttcaaacaagtc 22684171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 24430478 - 24430634
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| |||||  |||||| ||| || |  ||||||||| | ||||||||||  ||||| ||||| ||| |    
T  24430478 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtggtcttt-taagtttcaaaaatccaaaacaagtccttttagtttttgaatcg 24430576  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||||||||||  ||||||| |||||| ||  ||||||||||||    
T  24430577 tttcaaacaagtcctattgtagatagtatagttgataattgttttattgaactcatct 24430634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 7435006 - 7434964
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  7435006 attgtagataacatagttggtaattgcttccttgaactcatct 7434964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 28707435 - 28707509
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| || || ||||||||||| |||| ||| |||||||||||||||||||||||    
T  28707435 ttttagtttttgaatcgtttcaaacaaatcctattgtagatatcataattggtaattgcttccttgaactcatct 28707509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 29485406 - 29485364
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  29485406 attgtagataacatagttggtaattgcttccttgaactcatct 29485364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 38633675 - 38633773
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   ||||| ||  ||||| ||||| ||| |||||||| ||||  || |||||||| |||||||| |||||||||||||||||||||||    
T  38633675 gtttcaaaagtctcaaacaggtccttttagtttttgaatcgtttcaaacaagttctaatgtagatagcatagttggtaattgcttccttgaactcatct 38633773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 40301889 - 40301949
Alignment:
Q  170 ttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaa 230  Q
    |||| ||| |||||||| ||||||||||||||||| |||||||| |||||||||| |||||    
T  40301889 ttttgaatcgtttcaaaaaagtcatattgtagatagcatagttggtaattgcttcattgaa 40301949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 23935353 - 23935311
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  23935353 attgtagatagcatagttgataattgcttccttgaactcatct 23935311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 191
Target Start/End: Original strand, 6016052 - 6016162
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| ||||||||||||| |||||  ||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  6016052 ggtcaaatgcatttaaaagtcctttaagtttttcatttttccaaaagtgatcctt-taagtttcaaaagtcacaaacaagtctttttagtttttgaatcg 6016150  T
Q  180 tttcaaataagt 191  Q
    ||||||| ||||    
T  6016151 tttcaaacaagt 6016162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 165
Target Start/End: Complemental strand, 43806867 - 43806772
Alignment:
Q  72 taattaat-ggtcaaatgtatgtaaaagtc-ttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattt 165  Q
    |||||||| ||||||||| || |||| ||| ||||||| ||| ||||||||||||||| |||||| |  ||||||||||| | |||||||| ||||    
T  43806867 taattaataggtcaaatgcatctaaatgtccttttaagttttccatttttcccaaagtagtccttttaagtttcaaaagtcccaaacaagtcattt 43806772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 2533158 - 2533230
Alignment:
Q  119 tcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    |||||||||||||||| |  ||||||||||| | |||||||| |||||| ||||| ||| |||||||| |||||    
T  2533158 tcccaaagtcgtcctt-taagtttcaaaagtcctaaacaagtcattttagtttttgaatcgtttcaaacaagtc 2533230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 35443128 - 35443207
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||||||| |||| |||||| ||| ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||    
T  35443128 tggtcaaatgtatctaaaggtcttt-aagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagt 35443207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 15846956 - 15847035
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||| || |||| ||| |||||| | ||| ||||||||||||| |||||| |  ||||||||||||| ||||||||    
T  15846956 ggtcaaatgcatctaaaggtcctttaagttgttcgtttttcccaaagtggtcctt-taagtttcaaaagttccaaacaagt 15847035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 41282577 - 41282420
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  |||||||||||   |||||||| |||||| |||||||||     
T  41282577 tggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtcattttagtttttaaatc 41282479  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  41282478 atttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 41282420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 16095867 - 16096023
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| ||||||||||||| |||||||||||| |  ||||||||||| | ||||||    ||||||||||| ||| |    
T  16095867 ggtcaaatgcatctaaaagtcctttaagtttttcatttttccaaaagtcgtcctt-taagtttcaaaagtcccaaacaaacccttttaatttttgaatcg 16095965  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  16095966 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 16096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 6252206 - 6252052
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  6252206 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 6252108  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  6252107 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcat 6252052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 11935677 - 11935523
Alignment:
Q  82 tcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtt 181  Q
    |||||||||| |||| ||| |||||| |||||||||||||||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |||    
T  11935677 tcaaatgtatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtt 11935579  T
Q  182 tcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| |||||||||||||||||||| |||||| |||||||| |||||||    
T  11935578 tcaaacaagtcctattgtagataacatagttggtaattgtttccttgatctcatct 11935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 19659408 - 19659564
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||| ||||||||||||||||||||| |  |||||||||||   |||||||| |||||| ||||| ||| |    
T  19659408 ggtcaaatgcatctaaaggtcctttaagttttttatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatcg 19659506  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||  ||||||||||||    
T  19659507 tttcaaataagtcctattgtagatagcatagttggtaattgcttttttgaactcatct 19659564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 38964021 - 38964177
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  |||||||||||   |||| |||  ||||| ||| | ||| |    
T  38964021 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacgagtctttttagtttctgaatcg 38964119  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  38964120 tttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 38964177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 43166177 - 43166332
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| |||||| ||| ||||||||||||||||||||||| || |  |||||||||||   ||||||||  ||||| ||||| |||||    
T  43166177 ggtcaaatgtatctaaaggtcttt-aagtttttcatttttcccaaagtcgtcttt-taagtttcaaaagtctcaaacaagtccttttagtttttgaattg 43166274  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||| |||||||||||||    
T  43166275 tttcaaacaagtcctattgtagatagcatagttggtaattgctttcttgaactcatct 43166332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 35342416 - 35342258
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| ||| |||||| ||||||||||||||||||| |||||| |  ||||||||||||  ||| ||||  ||||| ||||| |||    
T  35342416 atggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctt-taagtttcaaaagtttcaaataagtccttttagtttttgaat 35342318  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| |||||  |||||||||| |||||||| |||||||||||||||||||||||    
T  35342317 cgtttcaaacaagtctcattgtagatagcatagttgataattgcttccttgaactcatct 35342258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 14717840 - 14717683
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaa-gttcaaaacaagttattttaatttttaaatt 178  Q
    ||||||||| || |||||||| |||||| |||||||||||  |||||| ||||||    ||||||||| |||| |||||||| |||||| ||||| |||     
T  14717840 ggtcaaatgcatctaaaagtcctttaagtttttcatttttttcaaagtggtccttcaa-gtttcaaaaagttccaaacaagtcattttagtttttgaatc 14717742  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  14717741 gtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 14717683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 236
Target Start/End: Complemental strand, 1052767 - 1052612
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| ||| | |||| |||||||||||| |||||| ||| || |  |||||||||||   ||||||||  ||||| ||||| |||||    
T  1052767 ggtcaaatgtatttaaaggtcctctaagtttttcatttttctcaaagtggtcatt-taagtttcaaaagtctcaaacaagtccttttagtttttgaattg 1052669  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatc 236  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  1052668 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatc 1052612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 6739891 - 6740018
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    ||||| ||||||||||||| |||||| |  |||||||||||   ||||||||| ||||| ||||| ||| |||||||| ||||| |||||||||||||||    
T  6739891 ttttcgtttttcccaaagtggtcctt-taagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtcctattgtagataacat 6739989  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||||||||||||||||||    
T  6739990 agttggtaattgcttccttgaactcatct 6740018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 8689783 - 8689650
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||| ||||||||||||| ||| ||| ||  ||||||||| | |||||||| |||||| ||||| ||| |||||||| |||||||| |||||    
T  8689783 tttaagtttttcgtttttcccaaagtggtctttaagt--ttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtcataatgtag 8689686  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||| |||||| ||||||||||||||||    
T  8689685 ataacatagttggtaattgattccttgaactcatct 8689650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 6600043 - 6600199
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||  |||||| ||||| ||||||| ||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  6600043 ggtcaaatgcatctaaacgttctttaagtttttcgtttttccgaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 6600141  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  6600142 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 6600199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 11000635 - 11000791
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || | || ||| |||||| ||||| ||||||||||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  11000635 ggtcaaatgcatcttaaggtcctttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 11000733  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  11000734 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 11000791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 237
Target Start/End: Original strand, 20079170 - 20079321
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttc 183  Q
    |||||||| ||||||||||| ||| |||||||||||   ||||| |||||| |  |||||||||||   |||||||| |||||| ||||| ||| |||||    
T  20079170 aaatgtatttaaaagtcttt-aagtttttcattttttttaaagtggtcctt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttc 20079267  T
Q  184 aaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| ||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  20079268 aaacaagtcctaatgtagataacatagttggtaattgcttccttgaactcatct 20079321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 28078312 - 28078468
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||||||| ||||  ||||| ||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  28078312 ggtcaaatgcatctaaaggtcttttaagttttttgttttttccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 28078410  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| || |||||||| |||||||| |||||||||||||||||||||||    
T  28078411 tttcaaacaagtcctaatgtagatagcatagttggtaattgcttccttgaactcatct 28078468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 20408767 - 20408613
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||| | |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  20408767 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaaatggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 20408669  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||||||    
T  20408668 tttcaaacaagtcctattgtagatagcatagttggtaattgcttcattgaactcat 20408613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 31710494 - 31710360
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||  ||||||||||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |||||||| |||||||| |||||    
T  31710494 tttaagtttttagtttttcccaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcataatgtag 31710396  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||| |||||||||||||||||||||||    
T  31710395 ataacatagttggtaattgcttccttgaactcatct 31710360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 39824791 - 39824634
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| |||||| ||| ||||| ||||||||||||| ||| || |  |||||||||||   ||||||||| ||||| ||||| |||    
T  39824791 atggtcaaatgcatctaaatgtcttt-aagtttttcgtttttcccaaagtggtcatt-taagtttcaaaagtctcaaacaagttcttttagtttttgaat 39824694  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| |||||||||| ||||||||| |||||||||||||||||| ||||    
T  39824693 cgtttcaaacaagtcctattgtagatgacatagttggtaattgcttccttgaacttatct 39824634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 27457162 - 27457260
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   ||||||||  ||||| ||||| ||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27457162 gtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcatct 27457260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 39001990 - 39002088
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||| ||| || |  ||||| ||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  39001990 gtttcaaaagttccaaataaatccttttagtttttgaattgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 39002088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 4015810 - 4015937
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    |||||||||||  |||||||||| || |  |||||||||||   |||||||| |||||| ||||| ||| |||||||  ||||| |||||||||||||||    
T  4015810 ttttcatttttttcaaagtcgtcttt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaagcaagtcctattgtagataacat 4015908  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||||||||||||||||||    
T  4015909 agttggtaattgcttccttgaactcatct 4015937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 8216134 - 8215980
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||  |||||||||||  ||||||||||||| |  |||| |||||| | | ||||||  ||||| ||||| ||| |    
T  8216134 ggtcaaatgcatttaaaggtcctttaaatttttcatttttttcaaagtcgtcctt-taagttttaaaagtcccatacaagtccttttagtttttgaatcg 8216036  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  8216035 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcat 8215980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 23128877 - 23128976
Alignment:
Q  139 gtttcaaaagt-tcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| ||||||||||| |||||| ||||| ||| |||||||| ||||||||| ||||||| |||| ||| |||||||||||||||||||||||    
T  23128877 gtttcaaaagtctcaaaacaagtcattttagtttttgaatcgtttcaaacaagtcatatcgtagatagcataattggtaattgcttccttgaactcatct 23128976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 235
Target Start/End: Original strand, 3351910 - 3352063
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| ||| |||||| |||||||||||| |||||| ||| || |  |||||||||||    |||||||  ||||  ||||| ||| ||    
T  3351910 gtcaaatgcatctaaaggtcctttaagtttttcatttttctcaaagtggtcatt-taagtttcaaaagtctcgaacaagtcctttttgtttttgaatcgt 3352008  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  3352009 ttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcat 3352063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 30863428 - 30863331
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| |||| ||||| |||||| ||||||||| |||||||| |||||||| |||||||| |||||||| |||||||||| ||||||||||||    
T  30863428 gtttcaaaagtccaaa-caagtcattttagtttttaaatcgtttcaaacaagtcataatgtagatagcatagttggtaattgcttctttgaactcatct 30863331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 42993694 - 42993596
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||| ||| ||||  ||||| ||||| |||||||||||| || || ||||||||||| |||||||| |||||||||||||||||||||||    
T  42993694 gtttcaaaagttccaaagaagtccttttagtttttgaattgtttcaaacaattcctattgtagatagcatagttggtaattgcttccttgaactcatct 42993596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 14952499 - 14952402
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||   ||||||||| ||||| ||||| ||| |||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||    
T  14952499 tttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtcttgttgtagataacatagttggtaattgcttccttgaactcatct 14952402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 237
Target Start/End: Original strand, 26593208 - 26593343
Alignment:
Q  101 ttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgta 200  Q
    ||||||| ||||||||||| |||| ||||| ||| |  |||||||||||   ||||||||  ||||| ||||| ||| |||||||| |||||||||||||    
T  26593208 ttttaagtttttcattttttccaacgtcgttctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgta 26593306  T
Q  201 gataacatagttgttaattgcttccttgaactcatct 237  Q
    |||| |||||||| |||||||||| ||||||| ||||    
T  26593307 gatagcatagttggtaattgcttctttgaacttatct 26593343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 11692130 - 11692210
Alignment:
Q  157 aagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||||| ||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  11692130 aagttcttttagtttttgaatcgtttcaaacaagtcatattgcagatagcatagttggtaattgcttccttgaactcatct 11692210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 33760390 - 33760533
Alignment:
Q  93 taaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    |||| ||| |||||| ||||||||||||| ||| ||||| || |  ||||||||||| | ||||||||  | ||| ||||| ||| |||||||| |||||    
T  33760390 taaaggtcctttaagtttttcatttttcctaaaatcgtcatt-taagtttcaaaagtcccaaacaagtcctcttagtttttgaatcgtttcaaacaagtc 33760488  T
Q  193 atattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     ||||||||||| |||||||| ||||| |||| ||||||||||||    
T  33760489 ctattgtagatagcatagttggtaattacttctttgaactcatct 33760533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 40075096 - 40075028
Alignment:
Q  169 tttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  40075096 tttttgaattgtttcaaacaagtcctattgtagataacatagttggtaattgcttcattgaactcatct 40075028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 30297697 - 30297812
Alignment:
Q  122 caaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgc 221  Q
    |||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||| |||||||    
T  30297697 caaagtggtccttttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgc 30297796  T
Q  222 ttccttgaactcatct 237  Q
    |||||| |||||||||    
T  30297797 ttccttcaactcatct 30297812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 43166584 - 43166504
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||||||| |||| |||||||||| ||||| |||||||||||||||||||| |  ||||||||||||| ||||||||    
T  43166584 tggtcaaatgtatctaaaggtcttttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagttccaaacaagt 43166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 19398113 - 19398256
Alignment:
Q  93 taaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    |||| |||||||||| ||||||||||| |||||||  ||||| |  |||||||||||   |||||| || ||||| ||||| |||  ||||||| ||||     
T  19398113 taaaggtcttttaagtttttcattttttccaaagtgatcctt-taagtttcaaaagtctcaaacaaattcttttagtttttgaatcatttcaaacaagtt 19398211  T
Q  193 atattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     ||||||||||| |||||||| |||||| ||| ||||||||||||    
T  19398212 ctattgtagatagcatagttggtaattgtttctttgaactcatct 19398256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 27116006 - 27116160
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| ||  |||||| ||||| ||||| | ||||| ||| || |  |||||||||||   ||||||||  ||||| ||||| |||      
T  27116006 ggtcaaatgtatctaaaggttctttaagtttttcgttttttctaaagtggtcttt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatca 27116104  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||| ||| ||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  27116105 ttttaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcat 27116160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 30208331 - 30208465
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||||||||| | ||| ||||| || |  |||||||||||   |||||| |  ||||| ||||| |||  ||||||| ||||  ||||||||    
T  30208331 tttaagtttttcattttttcaaaaatcgtcttt-taagtttcaaaagtctcaaacaaatccttttagtttttgaatcatttcaaacaagttctattgtag 30208429  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||| |||||||||||||||||||||||    
T  30208430 ataacatagttggtaattgcttccttgaactcatct 30208465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 8215718 - 8215808
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattt 171  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||||| |||||| || ||| |||||    
T  8215718 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagttccaaacaatttctttaaattt 8215808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 6333010 - 6332873
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||  ||||||||||||| |  |||| |||||| | ||||||||  ||||| ||||| ||| |    
T  6333010 ggtcaaatgcatctaaatgtcctttaagtttttcatttttttcaaagtcgtcctt-taagttttaaaagtcctaaacaagtccttttagtttttgaatcg 6332912  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaat 218  Q
    ||||||| ||||  |||||||||||  ||||||| ||||    
T  6332911 tttcaaacaagttctattgtagatagaatagttggtaat 6332873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 16752236 - 16752194
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  16752236 attgtagataacatagttggtaattgcttccttgaactcatct 16752194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 38964406 - 38964302
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| || ||||||| ||||||||||| |||||||||||||| |  ||||||||||| | |||||| | |||||| ||||| ||| |    
T  38964406 ggtcaaatgtatttaaaggt-ttttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaagtcccaaacaaatcattttagtttttgaatcg 38964309  T
Q  180 tttcaaa 186  Q
    |||||||    
T  38964308 tttcaaa 38964302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 8695041 - 8694944
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||   ||||||||  ||||| ||||| |||||||||||| ||||| ||||||||||| |||| ||| |||||  ||| ||||||||||||    
T  8695041 tttcaaaagtctcaaacaagtccttttagtttttgaattgtttcaaacaagtcctattgtagatagcataattgataattatttcattgaactcatct 8694944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 30863094 - 30863210
Alignment:
Q  74 attaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattttt 173  Q
    |||| |||||||||| || |||| |||||||||| ||||| ||||||||||||| |||||| |  |||||||||||   ||||||||  ||||| |||||    
T  30863094 attattggtcaaatgcatctaaaggtcttttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtctcaaacaagtcgttttagttttt 30863192  T
Q  174 aaattgtttcaaataagt 191  Q
     ||| |||||||| ||||    
T  30863193 gaatcgtttcaaacaagt 30863210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 33760793 - 33760739
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || |||||||| |||||| ||||| ||||||||||||||||||||    
T  33760793 ggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagtcgtcctt 33760739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 30298072 - 30297993
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||| || |||||||| |||||| ||||| ||||| ||||||| |||||| |  ||||||||||||| ||||||||    
T  30298072 ggtcaaatgcatctaaaagtcatttaagtttttcgttttttccaaagtggtcctt-taagtttcaaaagttccaaacaagt 30297993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 27510123 - 27510049
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataa-catagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| ||||| ||||||| |||| |||||||| |||||||||| ||||||||||||    
T  27510123 ttttagtttttgaatcgtttcaaacaagtcctattgta-ataagcatagttggtaattgcttctttgaactcatct 27510049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 445074 - 445032
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| ||||||||| |||||||||||||    
T  445074 attgtagatagcatagttggtaattgctttcttgaactcatct 445032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 26035367 - 26035409
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| ||||||||| |||||||||||||    
T  26035367 attgtagataccatagttggtaattgctttcttgaactcatct 26035409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 20517063 - 20517116
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    ||||||||||| | ||||||||  ||||| ||||| ||||||||||||||||||    
T  20517063 gtttcaaaagtcccaaacaagtctttttagtttttgaattgtttcaaataagtc 20517116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 40074855 - 40074908
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    ||||||||||| | ||||||||| ||||||||||| ||| |||||||| |||||    
T  40074855 gtttcaaaagtcccaaacaagttcttttaatttttgaatcgtttcaaacaagtc 40074908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 41282155 - 41282239
Alignment:
Q  75 ttaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    |||| ||||||||| || |||| ||| |||||| ||||  |||||||||||||||||||| |  ||||||||||| | ||||||||    
T  41282155 ttaaaggtcaaatgcatctaaacgtcctttaagttttttgtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagt 41282239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 4016196 - 4016117
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||| || |||| ||| |||||| | ||| |||||||||||||||||||| |  ||||||||||| | ||||||||    
T  4016196 ggtcaaatgcatctaaaggtcctttaagttattcgtttttcccaaagtcgtcctt-taagtttcaaaagtaccaaacaagt 4016117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 19661954 - 19661875
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||    
T  19661954 ggtcaaatgcatctaaaggtcgtttaagtttttcgtttttcccaaagttgtcctt-taagtttcaaaagtcccaaacaagt 19661875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 27116417 - 27116338
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||| || |||||||| |||||| ||||  ||||||||||||| |||||| |  ||||||||||| | ||||||||    
T  27116417 ggtcaaatgcatctaaaagtcctttaagttttttgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagt 27116338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 44544643 - 44544487
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| ||||  || |||||| |||||||||||||||||||||||||| |  ||||| ||||| | ||||||||  ||||| ||||||||| |    
T  44544643 ggtcaaatgtatctaaagatcctttaagtttttcatttttcccaaagtcgtcctt-taagtttctaaagtcccaaacaagtccttttagtttttaaatcg 44544545  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  44544544 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 44544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 47219379 - 47219223
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||  ||||||||||||| |  ||||||||||| | |||||||| |||||| ||||||||| |    
T  47219379 ggtcaaatgcatttaaaggtcctttaagtttttcatttttttcaaagtcgtcctt-taagtttcaaaagtcccaaacaagtcattttagtttttaaatcg 47219281  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  47219280 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 47219223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 48629039 - 48628885
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  48629039 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 48628941  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  48628940 tttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcat 48628885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 47294198 - 47294354
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  47294198 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 47294296  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| ||| |||| |||||||||||||||||||||||    
T  47294297 tttcaaacaagtcctattgtagatagcatcgttggtaattgcttccttgaactcatct 47294354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 221508 - 221353
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || ||||||||||||||| ||||||||||| | |||||||||||| |  ||||||||||||| |||||| |  ||||| ||||| ||| ||    
T  221508 gtcaaatgcatctaaaagtcttttaagtttttcattttttcgaaagtcgtcctt-taagtttcaaaagttccaaacaaatccttttagtttttgaatcgt 221410  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  221409 ttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaactcatct 221353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 237
Target Start/End: Original strand, 1469398 - 1469556
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    |||||||||||||| |||| |||||||||| ||||||||||||| ||||| |||||| |  |||||||| ||   ||||||||  ||||| ||||| |||    
T  1469398 atggtcaaatgtatctaaaggtcttttaagtttttcatttttcctaaagtggtcctt-taagtttcaaaggtctcaaacaagtctttttagtttttgaat 1469496  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  1469497 cgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 1469556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 47272215 - 47272059
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||||||||||||||| || |  ||||||||| |  ||||||| |  ||||| ||||| ||| |    
T  47272215 ggtcaaatgcatctaaatgtcctttaagtttttcatttttcccaaagtcgtcatt-taagtttcaaaattctaaaacaaatccttttagtttttgaatcg 47272117  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  47272116 tttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatct 47272059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 11476463 - 11476619
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||  ||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  11476463 ggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 11476561  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  11476562 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 11476619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 227
Target Start/End: Complemental strand, 42889065 - 42888937
Alignment:
Q  98 gtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatatt 197  Q
    |||||||||| |||||||||||||||||||||||||| |  ||||||||||||  ||| |||| |||||| ||||| ||| |||||||| ||||| ||||    
T  42889065 gtcttttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtttcaaataagtcattttagtttttgaatcgtttcaaacaagtcctatt 42888967  T
Q  198 gtagataacatagttgttaattgcttcctt 227  Q
    ||||||| |||||||| |||||||||||||    
T  42888966 gtagatagcatagttggtaattgcttcctt 42888937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 8162677 - 8162775
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   ||||||||||||||| ||||| |||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  8162677 gtttcaaaagtctcaaacaagttattttagtttttgaattgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 8162775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 37393904 - 37394061
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagctttt-catttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    ||||||||| || |||||||| |||||| |||| | ||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| |||     
T  37393904 ggtcaaatgcatctaaaagtcctttaagttttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatc 37394002  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||||||||||| |||||||| || ||||||||||||||||||||    
T  37394003 gtttcaaacaagtcctattgtagatagcatagttggtagttgcttccttgaactcatct 37394061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 2960547 - 2960703
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| | ||| |||||| |||||| |||||| |  ||||||||||| | |||||||| |||||| ||||| ||| |    
T  2960547 ggtcaaatgcatctaaaggtcctttaagttgttcgtttttctcaaagtggtcctt-taagtttcaaaagtcccaaacaagtcattttagtttttgaatcg 2960645  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  2960646 tttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaactcatct 2960703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 38427483 - 38427626
Alignment:
Q  93 taaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    |||| ||| |||||| |||||||||||| |||||||||| || |  |||||||||||   |||||||| |||||| ||||| ||| |||||||| |||||    
T  38427483 taaaggtcctttaagtttttcatttttctcaaagtcgtcttt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtc 38427581  T
Q  193 atattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||| |||||| |||||||| |||||||||||||||||||||||    
T  38427582 ctattatagatagcatagttggtaattgcttccttgaactcatct 38427626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 30876493 - 30876339
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  30876493 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 30876395  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||  ||||||||||| |||||||| |||||||||| ||||||||||    
T  30876394 tttcaaacaagtgctattgtagatagcatagttggtaattgcttcattgaactcat 30876339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 7336291 - 7336139
Alignment:
Q  82 tcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtt 181  Q
    ||||||| || |||| ||| |||||| |||||||||||  ||||||||||||| |  ||||||||| ||| ||||||||| ||||| ||||| ||| |||    
T  7336291 tcaaatgcatctaaaggtcctttaagtttttcatttttttcaaagtcgtcctt-taagtttcaaaaattccaaacaagttcttttagtttttgaatcgtt 7336193  T
Q  182 tcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatc 236  Q
    ||||| |  || ||||||||||| |||||||| ||||||||||||||||||||||    
T  7336192 tcaaacagttc-tattgtagatagcatagttgataattgcttccttgaactcatc 7336139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 31684041 - 31684197
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| |||  |||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  31684041 ggtcaaatgcatctaaaggtcctttaagtttttcgtttcccccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 31684139  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||||||||||  ||||||| |||||||||||||||||||||||    
T  31684140 tttcaaacaagtcctattgtagatagaatagttggtaattgcttccttgaactcatct 31684197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 35600029 - 35600185
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||  || |||| ||| |||||| |||||||||||  |||||| |||||| |  |||||||||||   ||| ||||  ||||| ||||| ||| |    
T  35600029 ggtcaaatacatttaaaggtcctttaagtttttcatttttttcaaagtggtcctt-taagtttcaaaagtctcaaataagtccttttagtttttgaatcg 35600127  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  35600128 tttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 35600185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 30798275 - 30798431
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||||||| || ||||| ||||||| ||||| ||| ||| ||  ||||||||| | ||||||||  ||||| || || |||     
T  30798275 tggtcaaatgcatataaaggtcttttgagtttttcgtttttcctaaagtggtctttaagt--ttcaaaagtcccaaacaagtccttttagttgttgaatc 30798372  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| || || ||||||||||| |||||||| |||||||||||||||||||||||    
T  30798373 gtttcaaacaaatcctattgtagatagcatagttggtaattgcttccttgaactcatct 30798431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 42979245 - 42979401
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| | |||||  ||||| |  ||||||||| ||| ||||||||  ||||| ||| | ||| |    
T  42979245 ggtcaaatgcatctaaaggtcctttaagtttttcattttttcaaaagtgttccttttaagtttcaaaa-ttctaaacaagtccttttagtttgtgaatcg 42979343  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||| ||||||||||||    
T  42979344 tttcaaacaagtcctactgtagataacatagttggtaattgcttcgttgaactcatct 42979401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 33884465 - 33884397
Alignment:
Q  169 tttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  33884465 tttttaaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatct 33884397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 41113612 - 41113457
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagctttt-catttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||||| |||| ||  |||||| |||| ||||||  ||||||| |||||| |  |||||||||||   |||||||| |||||| ||||| |||     
T  41113612 ggtcaaatgtatctaaaggttatttaagttttttcattttctccaaagtggtcctt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatc 41113514  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
     ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  41113513 atttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcat 41113457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 237
Target Start/End: Original strand, 43752697 - 43752839
Alignment:
Q  94 aaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtca 193  Q
    ||||||| |||||| |||||||||||   ||| | |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |||||||| |||||     
T  43752697 aaaagtcctttaagtttttcattttttttaaaatggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcc 43752795  T
Q  194 tattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||    
T  43752796 tattgtagatagcataattggtaattgcttccttgaactcatct 43752839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 23842481 - 23842383
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  23842481 gtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 23842383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 47120227 - 47120071
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| |||||||  ||||| |  ||||||||||| | |||||||| |||||| ||||| ||| |    
T  47120227 ggtcaaatgcatctaaatgtcctttaagtttttcattttttccaaagtgatcctt-taagtttcaaaagtcccaaacaagtcattttagtttttgaatcg 47120129  T
Q  180 tttcaaataagtcatattgtagata--acatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||| ||||||||| |  | ||||||| ||||||||| |||||||||||    
T  47120128 tttcaaacaagtcctattgtagagagcatatagttggtaattgctttcttgaactcat 47120071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 11050188 - 11050324
Alignment:
Q  100 cttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgt 199  Q
    ||||| || ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||  ||| | ||||| ||| |||||||| ||||| ||||||    
T  11050188 cttttgagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtcctttcagtttttgaatcgtttcaaacaagtcctattgt 11050286  T
Q  200 agataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| |||| ||| |||||||||||||||| ||||||    
T  11050287 agatagcatatttggtaattgcttccttgaattcatct 11050324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 23842151 - 23842263
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||||||| |||||| ||||| |||||| |||||| |||||| |  |||||||||||||||||||||| |||||| ||||| |||     
T  23842151 tggtcaaatgcatctaaaagtcctttaagtttttcgtttttctcaaagtggtcctt-taagtttcaaaagttcaaaacaagtcattttagtttttgaatc 23842249  T
Q  179 gtttcaaataagtc 192  Q
    |||||||| |||||    
T  23842250 gtttcaaacaagtc 23842263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 45723398 - 45723554
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| |||||||||| ||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  45723398 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgttctt-taagtttcaaaagtctcaaacaagtctttttagtttttgaatcg 45723496  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| || |||||||||||||| |||| ||  |||||| || |||||||||||||    
T  45723497 tttcaaacaaatcatattgtagatagcataattagtaattgttttcttgaactcatct 45723554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 44800389 - 44800473
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||| ||||| ||||| |||||||||||| ||||| | |||||||||||||||||| |||||| ||| ||||||||||||    
T  44800389 aaacaagttcttttagtttttgaattgtttcaaacaagtcctgttgtagataacatagttggtaattgtttcattgaactcatct 44800473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 47281103 - 47281187
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  47281103 aaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataccatagttggtaattgcttccttgaactcatct 47281187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 47579016 - 47579150
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| |||||||||||| |||||| |||||| |  |||||||||| || |||||||| |||||| ||||| |||||||||| | ||||| |||| |||    
T  47579016 tttaagtttttcatttttctcaaagtggtcctt-taagtttcaaaag-tccaaacaagtcattttagtttttgaattgtttcagacaagtcctattatag 47579113  T
Q  202 ataacatagttgttaa-ttgcttccttgaactcatct 237  Q
    ||| |||| ||| ||| ||||||||||||||||||||    
T  47579114 atagcataattggtaatttgcttccttgaactcatct 47579150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 42888715 - 42888833
Alignment:
Q  73 aattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttt 172  Q
    |||| ||||||||||| || |||| ||| |||||| ||||| |||||||||||||||||||| |  ||||||||||| | |||||||| |||||| ||||    
T  42888715 aatttatggtcaaatgcatctaaaggtcatttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtcattttagtttt 42888813  T
Q  173 taaattgtttcaaataagtc 192  Q
    | ||| |||||||| |||||    
T  42888814 tgaatcgtttcaaacaagtc 42888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 40851507 - 40851352
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| ||| |||||| |||||||||||   |||||||||||| |  ||||||||| ||  ||||||||  |||||  |||| ||| ||    
T  40851507 gtcaaatgcatctaaatgtcctttaagtttttcattttttttaaagtcgtcctt-taagtttcaaaaatttcaaacaagtccttttagcttttgaatcgt 40851409  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||||| |||||||| ||  ||||||| |||||||||||||||||| ||||    
T  40851408 ttcaaacaagtcctattgtaggtagaatagttggtaattgcttccttgaactaatct 40851352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 43968238 - 43968322
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||||| | |||||| |||||||||||||||||||||||    
T  43968238 aaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcgtagttggtaattgcttccttgaactcatct 43968322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 41139315 - 41139475
Alignment:
Q  80 ggtcaaatgtatgtaaaagtc-ttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||||| |||| ||| ||||||| ||||||||||| ||||||| || ||| |  ||||||||||| | ||||||||  ||| | ||||| |||     
T  41139315 ggtcaaatgtatctaaaggtccttttaagtttttcattttttccaaagttgtactt-taagtttcaaaagtcccaaacaagtccttt-agtttttgaatc 41139412  T
Q  179 gtttcaaataagtcatattgtagataacata----gttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||||||| ||| ||||    |||| |||||||||||||||||||||||    
T  41139413 gtttcaaacaagtcctattgtaaatagcatatatagttggtaattgcttccttgaactcatct 41139475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 47294586 - 47294474
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||||||||| |||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| |||     
T  47294586 tggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtctttttagtttttgaatc 47294488  T
Q  179 gtttcaaataagtc 192  Q
    |||||||| |||||    
T  47294487 gtttcaaacaagtc 47294474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 230
Target Start/End: Complemental strand, 5106275 - 5106127
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||  |||||| ||||||||||| ||||| |||||||| |  |||||||||||   |||||| |  ||||| ||||| ||| |    
T  5106275 ggtcaaatgcatctaaaggttatttaagtttttcattttttccaaaatcgtcctt-taagtttcaaaagtctcaaacaaatccttttagtttttgaatcg 5106177  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaa 230  Q
    ||||||| |  || ||||||||||| |||||||| ||||||||||||||||    
T  5106176 tttcaaacat-tcttattgtagatagcatagttggtaattgcttccttgaa 5106127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 27364328 - 27364402
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| |  || |||||||||||||||||||| ||||| |||||||||||||||||    
T  27364328 ttttagtttttgaatcgtttcaaacagatcctattgtagataacatagttggtaattacttccttgaactcatct 27364402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 29248477 - 29248420
Alignment:
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  29248477 tttcaaacaagtcttattgtagatagcatagttggtaattgattccttgaactcatct 29248420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 30971908 - 30972004
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| |||||| |||||  ||||| ||||| ||| |||||||| ||||||||||||||||  |||||||| ||||| ||||||| ||| |||||    
T  30971908 tttcaaaatttcaaa-caagtcgttttagtttttgaatcgtttcaaacaagtcatattgtagatggcatagttggtaattacttccttaaacccatct 30972004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 40851129 - 40851241
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||| |||||||||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| |||     
T  40851129 tggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatc 40851227  T
Q  179 gtttcaaataagtc 192  Q
    |||||||| |||||    
T  40851228 gtttcaaacaagtc 40851241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 3797544 - 3797586
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  3797544 attgtagatagcatagttgataattgcttccttgaactcatct 3797586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 4923352 - 4923294
Alignment:
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| |||||| |||| |||||||| ||||| |||||||||||||||||    
T  4923352 gtttcaaacaagtcctattgtggatagcatagttggtaattacttccttgaactcatct 4923294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 18353306 - 18353222
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||  ||||| ||||| ||| |||||||| ||||| ||  ||||||| |||||||| |||||| || |||||||||||||    
T  18353306 aaacaagtccttttagtttttgaatcgtttcaaacaagtcctaaggtagatagcatagttggtaattgttttcttgaactcatct 18353222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 31684428 - 31684317
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||| ||||||| ||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  31684428 ggtcaaatgcatctaaaggtcctttaagttttgcattttttccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 31684330  T
Q  180 tttcaaataagtc 192  Q
    ||||||| |||||    
T  31684329 tttcaaacaagtc 31684317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 39033879 - 39033966
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaa 168  Q
    ||||||||| || |||| ||| |||||| ||||| |||||| ||||||||||||| |  ||||||||||| | ||||||||| ||||||    
T  39033879 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtcgtcctt-taagtttcaaaagtcccaaacaagttcttttaa 39033966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 47119838 - 47119949
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| |||||  |||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  47119838 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 47119936  T
Q  180 tttcaaataagtc 192  Q
    |||||||||||||    
T  47119937 tttcaaataagtc 47119949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 27774228 - 27774189
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactca 234  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  27774228 attgtagatagcatagttggtaattgcttccttgaactca 27774189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 47271800 - 47271851
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtc 131  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||||    
T  47271800 ggtcaaatgcatctaaatgtcctttaagtttttcatttttcccaaagtcgtc 47271851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 1469816 - 1469762
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||||||||||    
T  1469816 ggtcaaatgcatctaaatgtcctttaagtttttcgtttttcccaaagtcgtcctt 1469762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 25801472 - 25801565
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattttt 173  Q
    |||||||||| || |||| ||| |||||| ||||||||||| ||||||| |||||| |  ||||||||||| | ||||||||  ||||| |||||    
T  25801472 tggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtggtcctt-taagtttcaaaagtcctaaacaagtccttttagttttt 25801565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 27772983 - 27773088
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||  |||||||||||||||||||| |   |||||||||||| |||| |||  ||||| ||||| ||| |    
T  27772983 ggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctt-taaatttcaaaagttccaaactagtccttttagtttttgaatcg 27773081  T
Q  180 tttcaaa 186  Q
    |||||||    
T  27773082 tttcaaa 27773088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 29739521 - 29739598
Alignment:
Q  82 tcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||||| ||||||||    
T  29739521 tcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtagtcctt-taagtttcaaaagttccaaacaagt 29739598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 30972234 - 30972122
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||| ||| |||||  |||||||||||||||| || |  ||||||||||| | |||||| | |||||| ||||| ||| |    
T  30972234 ggtcaaatgcatctaaaggtcttt-aagtttttcgattttcccaaagtcgtcttt-taagtttcaaaagtcccaaacaaatcattttagtttttgaatcg 30972137  T
Q  180 tttcaaataagtcat 194  Q
    ||||||| |||||||    
T  30972136 tttcaaacaagtcat 30972122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 37354284 - 37354326
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||||||| ||||||||||||    
T  37354284 attgtagatagcatagttggtaattgcttcattgaactcatct 37354326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 43968582 - 43968528
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||||||||||    
T  43968582 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt 43968528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 45233468 - 45233518
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    |||||||| |||| ||| |||||| ||||||||||| ||||||||||||||    
T  45233468 aaatgtatctaaaggtcctttaagtttttcattttttccaaagtcgtcctt 45233518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 34378512 - 34378569
Alignment:
Q  78 atggtcaaatgtatgtaaaagtc-ttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||||| || |||| ||| ||||||| ||||||||||| ||||||||||||||    
T  34378512 atggtcaaatgcatttaaaggtccttttaagtttttcattttttccaaagtcgtcctt 34378569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 45233753 - 45233641
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||  |||||||||||  ||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| |||     
T  45233753 tggtcaaatgcatctaaaggtcctttaaatttttcatttttttcaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatc 45233655  T
Q  179 gtttcaaataagtc 192  Q
    |||||||| |||||    
T  45233654 gtttcaaacaagtc 45233641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 48628644 - 48628677
Alignment:
Q  101 ttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||| ||||||||||||||||||||||||||    
T  48628644 ttttaagtttttcatttttcccaaagtcgtcctt 48628677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 28264877 - 28264721
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  28264877 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 28264779  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  28264778 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 28264721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 31591309 - 31591153
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| |||||||||||||||||||||||||| |  |||||||||||   |||| ||| |||||| ||||| ||| |    
T  31591309 ggtcaaatgcatctaaaagtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacgagtcattttagtttttgaatcg 31591211  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  31591210 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 31591153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 49118845 - 49118689
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  49118845 ggtcaaatgtatctaaatgtcgtttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 49118747  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||||||||    
T  49118746 tttcaaacaagtcctattgtagatagcatagttggtaattgcttcattgaactcatct 49118689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 55517094 - 55517248
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| |||||| ||| |||||||||||||||||||||||||| |  |||||||||||   ||||||||| ||||| ||||| ||| ||    
T  55517094 gtcaaatgcatctaaaggtcttt-aagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagttcttttagtttttgaatcgt 55517191  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| ||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  55517192 ttcaaacaagtcatattgtagatagcatagttggtaattgcttctttgaactcatct 55517248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 237
Target Start/End: Original strand, 24458536 - 24458694
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| ||| |||||| ||||||||||||| | ||| ||||||| | |||||||| || | ||||||||  ||||| ||||| |||    
T  24458536 atggtcaaatgcatctaaaggtcctttaagtttttcatttttcctagagtggtcctta-gagtttcaaaggtcccaaacaagtccttttagtttttgaat 24458634  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  24458635 cgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactcatct 24458694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 25730475 - 25730318
Alignment:
Q  80 ggtcaaatgtatgtaaaagtc-ttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||||| |||| ||| ||||||| ||||||||||| |||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| |||     
T  25730475 ggtcaaatgtatctaaatgtccttttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatc 25730377  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  25730376 gtttcaaacaagtcatattgtagatagcatagttggtaattgattccttgaactcatct 25730318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 50276044 - 50276201
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||||||||||||||||| |||||  |  ||||||||||| | ||||||||  ||||| ||||| |||     
T  50276044 tggtcaaatgcatctaaatgtcctttaagtttttcatttttcccaaagtggtcctg-taagtttcaaaagtcccaaacaagtccttttagtttttgaatc 50276142  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  50276143 gtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 50276201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 15985243 - 15985088
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| ||||||| ||||||| ||||| |||||  |||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  15985243 ggtcaaatgtatctaaaagt-ttttaagtttttcgtttttttcaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 15985146  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  15985145 tttcaaacaagtcatattctagataacatagttggtaattgcttccttgaactcatct 15985088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 44490540 - 44490397
Alignment:
Q  93 taaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    |||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |||||||| |||||    
T  44490540 taaatgtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 44490442  T
Q  193 atattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     ||||||||||| |||||||| |||||||||| ||||||||||||    
T  44490441 ctattgtagatatcatagttggtaattgcttcattgaactcatct 44490397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 19496008 - 19496165
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || ||||  ||||||||| |||||||||||||||||||  ||||| |   ||||||| || | ||||||||  ||||| ||||| ||||    
T  19496008 tggtcaaatgcatctaaagttcttttaagtttttcatttttcccaaagtgatcctt-taaatttcaaaggtcccaaacaagtccttttagtttttgaatt 19496106  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  19496107 gtttcaaacaagtcctattgtagataccatagttggtaattgcttccttgaactcatct 19496165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 23134916 - 23135069
Alignment:
Q  83 caaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgttt 182  Q
    |||||| || |||| ||| | |||| |||||||||||||||||||| ||||| |  ||||||||||||  |||||| |  ||||| ||||| ||| ||||    
T  23134916 caaatgcatctaaaggtcctgtaagtttttcatttttcccaaagtcatcctt-taagtttcaaaagtttcaaacaaatccttttagtttttgaatcgttt 23135014  T
Q  183 caaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  23135015 caaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatct 23135069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 33807688 - 33807843
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||||||||||||||| ||| ||  |||||||||   ||||||||  ||||| ||||| ||| |    
T  33807688 ggtcaaatgcatctaaaggtcatttaagtttttcatttttcccaaagtcgtctttaagt--ttcaaaagtctcaaacaagtccttttagtttttgaatcg 33807785  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||||||||    
T  33807786 tttcaaacaagtcctattgtagatagcatagttggtaattgcttctttgaactcatct 33807843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 31973828 - 31973669
Alignment:
Q  77 aatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaa 176  Q
    |||||||||||| || |||| ||| |||||  ||||| |||||||||||||  ||||| |  ||||||||||||| ||||||||  ||||| ||||| ||    
T  31973828 aatggtcaaatgcatctaaatgtcctttaaatttttcgtttttcccaaagtgatcctt-taagtttcaaaagttccaaacaagtccttttagtttttgaa 31973730  T
Q  177 ttgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    | |||||||| ||||  ||||||||||| |||||||| |||||||||||||||||||||||    
T  31973729 tcgtttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaactcatct 31973669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 5227624 - 5227470
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||| ||||||| || ||| |  ||||||||||| | |||||||| |||||| ||||| ||| |    
T  5227624 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggttctt-taagtttcaaaagtcccaaacaagtcattttagtttttgaatcg 5227526  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  5227525 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcat 5227470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 235
Target Start/End: Complemental strand, 12196699 - 12196549
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttc 183  Q
    ||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  | ||||||||| | ||||||||  ||||| ||||| |||  ||||    
T  12196699 aaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagcttcaaaagtcccaaacaagtccttttagtttttgaatcatttc 12196601  T
Q  184 aaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||| ||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  12196600 aaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcat 12196549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 33173927 - 33174083
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| ||||||||||| || |  |||||||||||   ||||||||  ||||| |||| |||| |    
T  33173927 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcatt-taagtttcaaaagtctcaaacaagtccttttagttttcaaatcg 33174025  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||  |||||||| |||||||||||||||||||||||    
T  33174026 tttcaaacaagtcttattgtagatttcatagttggtaattgcttccttgaactcatct 33174083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 42274036 - 42273880
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| ||  ||| ||| |||||| ||||||||||| |||||||||||||| |  ||||||||| |   ||||||||  ||||| ||||| ||| |    
T  42274036 ggtcaaatgcatcaaaaggtcctttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaaatctcaaacaagtccttttagtttttgaatcg 42273938  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  42273937 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 42273880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 236
Target Start/End: Original strand, 9339031 - 9339185
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||| ||| |||||||||||  ||||||||||||| |  |||||||||||   |||||| |  ||||| ||||| |||      
T  9339031 ggtcaaatgcatctaaaggtcttt-aagtttttcatttttttcaaagtcgtcctt-taagtttcaaaagtctcaaacaattccttttagtttttgaatca 9339128  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatc 236  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9339129 tttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcatc 9339185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 31208956 - 31208822
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||||||||||| ||| ||||| || |  ||||||||||| |||||||| |  ||||| ||||| ||| |||||||| ||||| ||||||||    
T  31208956 tttaagtttttcatttttcctaaattcgtcatt-taagtttcaaaagtccaaaacaactccttttagtttttgaatcgtttcaaacaagtcctattgtag 31208858  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||| |||||||||||||||||||||||    
T  31208857 atagcatagttggtaattgcttccttgaactcatct 31208822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 28812193 - 28812350
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||| |||||||||||||  ||||| |  |||||||||||   ||||||||  ||||| ||||| |||     
T  28812193 tggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtgatcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatc 28812291  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||||||||| ||||||    
T  28812292 gtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaagtcatct 28812350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 237
Target Start/End: Complemental strand, 40988869 - 40988711
Alignment:
Q  74 attaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattttt 173  Q
    |||| ||||||||||||| |||||||| |||||| ||||  ||||||| ||||| |||||| |  |||||||||||   ||||||||  ||||||||       
T  40988869 attattggtcaaatgtatctaaaagtcctttaagttttttgtttttcctaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttaatt--- 40988774  T
Q  174 aaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     ||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  40988773 -aatcgtttcaaacaagtcctattgtagatagcatagttgataattgcttccttgaactcatct 40988711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 4544893 - 4545048
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||| ||| ||||||||||| | ||||| |||||| |  |||||||| || | ||||||||  ||||| ||||| ||| |    
T  4544893 ggtcaaatgcatctaaaggtcttt-aagtttttcattttttctaaagtagtcctt-taagtttcaaaggtcctaaacaagtccttttagtttttgaatcg 4544990  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  4544991 tttcaaacaagtcctattgtagataacatagttggtaattgcttccttaaactcatct 4545048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 26017657 - 26017501
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| ||| || ||||||||||| ||||||| |||||| |  |||||||||||   ||||||||  || || ||||| ||| |    
T  26017657 ggtcaaatgcatctaaaggtcctttgagtttttcattttttccaaagttgtcctt-taagtttcaaaagtcacaaacaagtccttgtagtttttgaatcg 26017559  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  26017558 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 26017501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 237
Target Start/End: Complemental strand, 48149729 - 48149577
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttc 183  Q
    ||||| || |||| ||| |||||| ||||| ||||| ||||||| || ||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |||||    
T  48149729 aaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggttctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttc 48149631  T
Q  184 aaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| ||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  48149630 aaacaagtcctaatgtagataacatagttggtaattgcttccttgaactcatct 48149577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 48551671 - 48551827
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| |||||  |||||| |||||| |  |||||||||||   |||||||| |||||| ||||| ||| |    
T  48551671 ggtcaaatgcatctaaatgtcctttaagtttttcgtttttttcaaagtggtcctt-taagtttcaaaagtctcaaacaagtcattttagtttttgaatcg 48551769  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| ||| |||| ||||||||| |||||||||||||    
T  48551770 tttcaaacaagtcatattgtagatagcatggttggtaattgctttcttgaactcatct 48551827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 48707662 - 48707796
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| |||||||||||  ||||||||||||| |  |||||||||||   ||||||||| |||||  |||| |||  ||||||| ||||| ||||||||    
T  48707662 tttaagtttttcatttttttcaaagtcgtcctt-taagtttcaaaagtctcaaacaagttcttttagattttgaatcttttcaaacaagtcctattgtag 48707760  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||| |||||||||||||||||||||||    
T  48707761 atagcatagttggtaattgcttccttgaactcatct 48707796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 2055454 - 2055356
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||| |||||||| ||||||||  ||||  ||||| ||| |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  2055454 gttttaaaagttccaaacaagtcgtttttgtttttgaatcgtttcaaacaagtcatattgtagataacatagttgataattgcttccttaaactcatct 2055356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 23553306 - 23553142
Alignment:
Q  72 taattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattt 171  Q
    |||| |||||||||||| || |||| ||| |||||| ||||| ||||| | ||||| |||||| |  |||| ||||||   |||||| |  ||||| |||    
T  23553306 taataaatggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaagtggtcctt-taagttttaaaagtcacaaacaaatccttttagttt 23553208  T
Q  172 ttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    || ||| |||||||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  23553207 ttgaatcgtttcaaacaagtcatgttgtagatagcataattgttaattgcttccttgaactcatct 23553142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 33693299 - 33693396
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||| ||| ||||  ||||||||||| ||| |||||||| ||||| | ||||||||| |||||||| |||||||||||||||||||||||    
T  33693299 tttcaaaagttccaaataagtccttttaatttttgaatcgtttcaaacaagtcctgttgtagatagcatagttggtaattgcttccttgaactcatct 33693396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 11795059 - 11795217
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagctttt-catttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    |||||||||| || |||| ||| |||||| |||| | |||||  |||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| |||    
T  11795059 tggtcaaatgcatctaaaggtcctttaagttttttcgtttttttcaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaat 11795157  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| |||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  11795158 cgtttcaaacaagtcatattctagatagcatagttggtaattgtttccttgaactcatct 11795217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 39995072 - 39995230
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagctttt-catttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    |||||||||| || |||| ||| |||||| |||| | ||||||||||||| |||||| |  |||| ||||||   ||||||||  ||||| ||||| |||    
T  39995072 tggtcaaatgcatctaaaggtcctttaagttttttcgtttttcccaaagtggtcctt-taagttttaaaagtctcaaacaagtctttttagtttttgaat 39995170  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||  |||||||||||||||||||| |||||||||| ||||||||||||    
T  39995171 cgtttcaaacaagttctattgtagataacatagttggtaattgcttcattgaactcatct 39995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 8881912 - 8882076
Alignment:
Q  74 attaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttc--ccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattt 171  Q
    ||||| ||||||||| || |||| ||| |||||| |||||||||||   | ||||| |||||| |  ||||||||||| | ||||||||  ||||| |||    
T  8881912 attaaaggtcaaatgcatttaaaggtcctttaagtttttcattttttttctaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagttt 8882010  T
Q  172 ttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    || ||| |||||||| ||||| |||| |||||| |||||||| |||||||||| ||||||||||||    
T  8882011 ttgaatcgtttcaaacaagtcctattctagatagcatagttgataattgcttctttgaactcatct 8882076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 10588813 - 10588660
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| ||| |||||  ||||| |||||  |||||| |||||| |  ||||||||||| | |||||| |  |||||||||||  || ||    
T  10588813 gtcaaatgcatctaaaggtcctttaaatttttcgtttttgtcaaagtggtcctt-taagtttcaaaagtcccaaacaaatccttttaatttttggatcgt 10588715  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    |||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  10588714 ttcaaacaagtcgtattgtagatagcatagttggtaattgcttccttgaactcat 10588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 17847004 - 17847159
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| |||| |||||||| |||||| |  |||||||||||   ||||||||  || || ||||| ||| |    
T  17847004 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt-cccaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttatagtttttgaatcg 17847101  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||||||    
T  17847102 tttcaaacaagtcctattgtagatagcataattggtaattgcttccttgaactcatct 17847159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 22298752 - 22298596
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  22298752 ggtcaaatgcatctaaatgtcctttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 22298654  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||| | ||||||||||| |||| ||| |||||| |||||| |||||||||    
T  22298653 tttcaaacaagccctattgtagatagcataattggtaattgtttccttaaactcatct 22298596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 28159862 - 28160016
Alignment:
Q  82 tcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtt 181  Q
    ||||||| || |||| ||| |||||| ||||| ||||||  ||||| |||||| |  ||||||||| |   ||||||||| ||||| ||||| |||  ||    
T  28159862 tcaaatgcatctaaaggtcctttaagtttttcgtttttcttaaagtggtcctt-taagtttcaaaaatctcaaacaagttcttttagtttttgaatcatt 28159960  T
Q  182 tcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||||||||||| |||||||| ||||||||| |||||||||||||    
T  28159961 tcaaacaagtcttattgtagataccatagttggtaattgctttcttgaactcatct 28160016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 50542259 - 50542417
Alignment:
Q  79 tggtcaaatgtatgtaaaagtc-ttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||||| |||| ||| ||||||| ||||| |||||  |||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| |||    
T  50542259 tggtcaaatgtatctaaaggtccttttaagtttttcgtttttttcaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaat 50542357  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||| ||| || || ||||||||||| |||||||| |||||||||| ||||||||||||    
T  50542358 cgttttaaacaaatcttattgtagatagcatagttggtaattgcttcattgaactcatct 50542417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 20534341 - 20534243
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   ||||||||  ||||||||||| ||| |||||||| ||||| |||||| |||| |||||||| |||||||||| ||||||||||||    
T  20534341 gtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttcaaacaagtcctattgttgatagcatagttggtaattgcttctttgaactcatct 20534243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 30141073 - 30141171
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||| ||| ||||||||  ||||| ||||| ||| |||||||| ||||| |||||| |||| |||||||| |||||||||| ||||||||||||    
T  30141073 gtttcaaaaattctaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgttgatagcatagttggtaattgcttcattgaactcatct 30141171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 32118890 - 32118792
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| | |||||| |  ||||| ||||||||| |||||||| ||||  ||||||||||| |||||||| |||||||||| ||||||||||||    
T  32118890 gtttcaaaagtcccaaacaaatccttttagtttttaaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttcattgaactcatct 32118792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 30466910 - 30467066
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttccc-aaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||| || |||| |||||||||| ||||| |||||  | ||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  30466910 gtcaaatgcatctaaaggtcttttaagtttttcgtttttttctaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 30467008  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||  ||||||||||| |||||||| ||||| |||||||||||||||||    
T  30467009 tttcaaacaagttctattgtagatagcatagttggtaatttcttccttgaactcatct 30467066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 35930251 - 35930119
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| |||||||||||  |||||| |||||| |  |||||||| |||| |||||| |  ||||| ||||| ||| |||||||| ||||  ||||||||    
T  35930251 tttaagtttttcatttttttcaaagtggtcctt-taagtttcaaaggttccaaacaaatccttttagtttttgaatcgtttcaaacaagttctattgtag 35930153  T
Q  202 ataacatagttgttaattgcttccttgaactcat 235  Q
    ||| |||||||| ||||||||||| |||||||||    
T  35930152 atagcatagttggtaattgcttccatgaactcat 35930119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 37382022 - 37381926
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    |||||||||||   ||||||||  ||||  |||||||||  ||||||| ||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  37382022 gtttcaaaagtctcaaacaagtcctttttgtttttaaatcatttcaaacaagtcatattgtagatagcatagttggtaattgcttccttaaactcat 37381926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 32318114 - 32318031
Alignment:
Q  154 aacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||  ||||| ||||| |||  ||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  32318114 aacaagtccttttagtttttgaatcatttcaaacaagtcctattgtagataacatagttggtaattgcttcattgaactcatct 32318031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 51371036 - 51371110
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| ||| |||||||| ||||  ||||||||||| |||||||| |||||||||||||||| ||||||    
T  51371036 ttttaatttttgaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaattcatct 51371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 28264485 - 28264601
Alignment:
Q  75 ttaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattttta 174  Q
    |||| ||||||||| || |||| ||| |||||| ||||| |||||||||||||||| ||| |  ||||||||||| | ||||||||  |||||||||||     
T  28264485 ttaaaggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgttctt-taagtttcaaaagtcccaaacaagtccttttaatttttg 28264583  T
Q  175 aattgtttcaaataagtc 192  Q
    ||| |||||||| |||||    
T  28264584 aatcgtttcaaacaagtc 28264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 17993006 - 17993080
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| ||||| ||||||| ||| |||||||| ||||||||||||| |||||||||    
T  17993006 ttttagtttttgaatcgtttcaaacaagtcctattgtaaatagcatagttggtaattgcttccttaaactcatct 17993080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 39700197 - 39700123
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| || ||| |||||||| ||||| |||| ||||||||||| ||| |||||| ||||||||||||||||    
T  39700197 ttttaattattgaatcgtttcaaacaagtcttattatagataacataattggtaattgtttccttgaactcatct 39700123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 25734229 - 25734286
Alignment:
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||  ||||||||||||    
T  25734229 tttcaaacaagtcctattgtagataacatagttggtaattgcttaattgaactcatct 25734286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 26017270 - 26017381
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||| |||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  26017270 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 26017368  T
Q  180 tttcaaataagtc 192  Q
    ||||||| |||||    
T  26017369 tttcaaacaagtc 26017381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 17992957 - 17993007
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    |||| ||| |||| |||||||||| ||||||||||||||||||||||||||    
T  17992957 aaatatatctaaaggtcttttaagtttttcatttttcccaaagtcgtcctt 17993007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 19168816 - 19168858
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  19168816 attgtagatagcatagttggtaattgcttccttgaactcatct 19168858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 24623268 - 24623226
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  24623268 attgtagatagcatagttggtaattgcttccttgaactcatct 24623226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 31590896 - 31590972
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaa 158  Q
    |||||||||||| |||| || ||||||| ||||||||||| |||||||||||||| |  ||||||||||||| ||||||    
T  31590896 ggtcaaatgtatttaaaggt-ttttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaagttccaaacaa 31590972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 31208565 - 31208645
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    |||||||||| || |||| ||| |||||| ||||| |||||||||||||||||||| |  ||||||||||| | ||||||||    
T  31208565 tggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagt 31208645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 23135300 - 23135189
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| | | |||||| ||||||||||| |||||||||||||| |  |||| ||||||   ||||||||  ||||| ||||| ||| |    
T  23135300 ggtcaaatgcatctaaatggcctttaagtttttcattttttccaaagtcgtcctt-taagtttaaaaagtctcaaacaagtccttttagtttttgaatcg 23135202  T
Q  180 tttcaaataagtc 192  Q
    |||||||||||||    
T  23135201 tttcaaataagtc 23135189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 12196296 - 12196350
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||||||||||    
T  12196296 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt 12196350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 42549643 - 42549685
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||    
T  42549643 attgtagataacatagttggtaattgcttcattgaacttatct 42549685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 48149404 - 48149457
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    ||||||||||| | ||||||||| ||||||||||| ||| |||||||| |||||    
T  48149404 gtttcaaaagtcccaaacaagttcttttaatttttgaatcgtttcaaacaagtc 48149457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 49118459 - 49118563
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| ||| |||||| ||||| |||||| ||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| ||    
T  49118459 gtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgt 49118557  T
Q  181 ttcaaa 186  Q
    ||||||    
T  49118558 ttcaaa 49118563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 9339450 - 9339379
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttc 151  Q
    |||||||||| || |||| ||| |||||| ||||||||||| ||||| |||||||| |  |||||||||||||    
T  9339450 tggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaaatcgtcctt-taagtttcaaaagttc 9339379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 17847447 - 17847368
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||    
T  17847447 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctt-taggtttcaaaagtcccaaacaagt 17847368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 25734547 - 25734495
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtc 131  Q
    |||||||||| || |||| ||| |||||| ||||| |||||||||||||||||    
T  25734547 tggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtc 25734495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 48708005 - 48707922
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaa 186  Q
    |||||| ||||| |||||| ||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| ||||||||    
T  48708005 tttaagtttttcgtttttctcaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaa 48707922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 51371314 - 51371262
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagt 191  Q
    ||||||||||||| ||||||||  ||||||||||| ||| |||||||| ||||    
T  51371314 gtttcaaaagttccaaacaagtccttttaatttttgaatcgtttcaaacaagt 51371262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 2456244 - 2456088
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| |||||||||||||||| ||||||||| |  |||||||||||   ||||||||  ||||| ||||| |||||    
T  2456244 ggtcaaatgcatctaaaagtcctttaagtttttcatttttcccaatgtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaattg 2456146  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  2456145 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 2456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 79 - 235
Target Start/End: Original strand, 12759656 - 12759811
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| |||     
T  12759656 tggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatc 12759754  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  12759755 gtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcat 12759811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 9276810 - 9276652
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| ||| |||||| ||||||||||||| |||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| |||    
T  9276810 atggtcaaatgcatctaaaggtcatttaagtttttcatttttcctaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaat 9276712  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  9276711 cgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 9276652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 36444134 - 36444291
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || ||||  ||||||||| ||||||||||| |||||||||||||| |  |||||||||||   ||||||||  ||||| |||||||||     
T  36444134 tggtcaaatgcatctaaagatcttttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttaaatc 36444232  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| ||| ||||||| |||||||| |||||||||||||||||||||||    
T  36444233 gtttcaaacaagtcctatagtagatagcatagttggtaattgcttccttgaactcatct 36444291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 37838531 - 37838375
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||||| |||||||||||| |  |||||||||||   ||||||||  ||||||||||| ||| |    
T  37838531 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcctaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttaatttttgaatcg 37838433  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||||||||    
T  37838432 tttcaaacaagtcctattgtagatagcatagttggtaattgcttctttgaactcatct 37838375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 14630846 - 14630692
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| ||||||||||| |||||| ||||||||||||| |||||  ||||| |  |||| ||| || | ||||||||  ||||| ||||| ||| ||    
T  14630846 gtcaaatgcatgtaaaagtcctttaagtttttcatttttcc-aaagtgatcctt-taagttttaaaggtcccaaacaagtccttttagtttttgaatcgt 14630749  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14630748 ttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcatct 14630692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 33106869 - 33107032
Alignment:
Q  73 aattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttt 172  Q
    |||||| | ||||||| || ||||| || |||||| |||||||||||||||||||||||||| |  |||||||||||   ||||||||  ||||| ||||    
T  33106869 aattaaagatcaaatgcatctaaaactcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttt 33106967  T
Q  173 taaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    | ||| ||||||||  |||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  33106968 tgaatcgtttcaaacgagtcctattgtagatatcatagttggtaattgcttccttgaactcatct 33107032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 771877 - 772038
Alignment:
Q  74 attaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattttt 173  Q
    |||| |||||||||| || |||| ||| |||||| ||||||||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||| |||||    
T  771877 attattggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagttttt 771975  T
Q  174 aaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||  ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  771976 gaatc-tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 772038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 41500405 - 41500565
Alignment:
Q  76 taatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaa 175  Q
    ||||||||||||| || |||| ||| |||||| ||||||||||||||||||| |||||| |  |||||||||||   ||||||||  || || ||||| |    
T  41500405 taatggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttctagtttttga 41500503  T
Q  176 attgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    || |||||||| ||||| ||||||| ||| |||||||| |||||||||||||||||||||||    
T  41500504 atcgtttcaaacaagtcctattgtacatagcatagttggtaattgcttccttgaactcatct 41500565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 8899917 - 8899760
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| ||| |||||| |||||||||||  ||||||||||||| |  |||||||||||   ||||||||| ||||| ||||| |||    
T  8899917 atggtcaaatgcatctaaaggtcctttaagtttttcatttttttcaaagtcgtcctt-taagtttcaaaagtctcaaacaagttcttttagtttttgaat 8899819  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||  ||||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  8899818 cgtttcaac-aagtcatattgtagatagcatagttggtaattgcttccatgaactcatct 8899760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 37732100 - 37732254
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||||||||||||||| || |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  37732100 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcttt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 37732198  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||| ||||||| |||||||||||| ||||||||| |||||||||||    
T  37732199 tttcaaacaagtcttattgtaaataacatagttggtaattgctttcttgaactcat 37732254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 40854845 - 40854687
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||| ||| || |||| ||| |||||| ||||||||||||||||||| |||||| |  ||||||||||| | |||| |||  ||||  ||||| |||    
T  40854845 atggtcagatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctt-taagtttcaaaagtcccaaactagtcctttttgtttttgaat 40854747  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  40854746 cgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 40854687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 2057168 - 2057004
Alignment:
Q  71 ttaattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatt 170  Q
    |||||||  ||||||||| || |||| ||| |||||| |||||||||| |||||||| ||| || |  ||||||||||| | | ||||||  ||||| ||    
T  2057168 ttaattataggtcaaatgcatctaaaggtcctttaagtttttcatttt-cccaaagtggtcttt-taagtttcaaaagtcccagacaagtccttttagtt 2057071  T
Q  171 tttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| ||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  2057070 tttgaatcgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactcatct 2057004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 36211281 - 36211124
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttca-aaacaagttattttaatttttaaatt 178  Q
    ||||||||| || |||| ||| |||||| ||||| ||||| ||||||| |||||| |  |||||||||| ||  ||||||||  ||||||||||||||||    
T  36211281 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctt-taagtttcaaaaggtctcaaacaagtccttttaatttttaaatt 36211183  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| |||| ||||||||||||||  |||||||||| ||||||||||||    
T  36211182 gtttcaaacaagtcctattctagataacatagtttgtaattgcttctttgaactcatct 36211124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 7379195 - 7379041
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || ||||  ||||||||| ||||| ||||| ||||||| ||| ||| ||  ||||||||| | ||||||||| ||||| ||||| ||| ||    
T  7379195 gtcaaatgcatctaaagatcttttaagtttttcgttttttccaaagttgtctttaagt--ttcaaaagtcccaaacaagttcttttagtttttgaatcgt 7379098  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||| |||||||| ||||||||  ||||||| |||||||||||||||||||||||    
T  7379097 ttcaaacaagtcataatgtagatagaatagttggtaattgcttccttgaactcatct 7379041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 27328818 - 27328662
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||  |||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  27328818 ggtcaaatgcatctaaaggtcctttaagtttttcatttttttcaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 27328720  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  27328719 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 27328662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 19180642 - 19180499
Alignment:
Q  93 taaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    |||| ||| |||||| ||||||||||| |||||||||||||| |  ||||||||||||| ||||||||   |||| ||||| ||| |||||||| |||||    
T  19180642 taaaggtcctttaagtttttcattttttccaaagtcgtcctt-taagtttcaaaagttccaaacaagtccatttagtttttgaatcgtttcaaacaagtc 19180544  T
Q  193 atattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||||||  ||||||  |||||||||||||||||||||||    
T  19180543 ttattgtagatagtatagttagtaattgcttccttgaactcatct 19180499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 25087761 - 25087860
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatctc 238  Q
    ||||||||||| | |||||||| |||||  ||||| |||||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25087761 gtttcaaaagtcccaaacaagtcatttttgtttttgaattgtttcaaacaagtcttattgtatataacatagttgataattgcttccttgaactcatctc 25087860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 2094318 - 2094473
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||| ||||| |||||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  2094318 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaa-tcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 2094415  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||| ||||    
T  2094416 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactaatct 2094473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 2314882 - 2315038
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| |||| |||| | ||||||| |||||| |  |||||||| || | ||| ||||  ||||| ||||| |||||    
T  2314882 ggtcaaatgcatctaaaagtcctttaagttttttatttcttccaaagtggtcctt-taagtttcaaaggtcccaaataagtccttttagtttttgaattg 2314980  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  2314981 tttcaaacaagtcttattgtagatagcatagttggtaattgtttccttgaactcatct 2315038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 11949333 - 11949489
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| ||||||||||| ||||||| ||| || |  |||||||| ||   ||||||||  ||||| ||||| ||| |    
T  11949333 ggtcaaatgcatctaaaagtcctttaagtttttcattttttccaaagtggtcatt-taagtttcaaatgtctcaaacaagtccttttagtttttgaatcg 11949431  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  11949432 tttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaactcatct 11949489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 17484457 - 17484613
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||  |||||| ||||| |||||| |||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  17484457 ggtcaaatgcatctaaaggttctttaagtttttcgtttttctcaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 17484555  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||||||||    
T  17484556 tttcaaacaagtcctattgtagatagcatagttggtaattgcttctttgaactcatct 17484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 28650333 - 28650489
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||| || |||||||||||| |  |||||||||||   |||||| |  ||||| ||||| ||| |    
T  28650333 ggtcaaatgcatctaaaggtcctttaagtttttcattttccctaaagtcgtcctt-taagtttcaaaagtctcaaacaaatccttttagtttttgaatcg 28650431  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||||||    
T  28650432 tttcaaacaagtcctattgtagatagcatagttggtaatttcttccttgaactcatct 28650489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 16246158 - 16246256
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| | ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  16246158 gtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 16246256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 23671719 - 23671874
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||||||| || |  ||||||||||| |  ||||| | ||||||  |||| ||| |    
T  23671719 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcatt-taagtttcaaaagt-ctcaacaaatcattttagattttgaatcg 23671816  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||| |||||||||| |||| |||||||||||||||||||||||    
T  23671817 tttcaaacaagtcttattatagataacatggttggtaattgcttccttgaactcatct 23671874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 42630196 - 42630040
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||||||| ||||| ||||||||||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  42630196 ggtcaaatgcatctaaaggtcttttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtctcaaacaagtctttttagtttttgaatcg 42630098  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||  |||||| |||| ||| ||||||||| |||||||||||||    
T  42630097 tttcaaacaagtcctatcatagatagcataattgataattgctttcttgaactcatct 42630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 33865246 - 33865330
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||| || ||||| ||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  33865246 aaacaagtcattctagtttttgaatcgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactcatct 33865330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 921234 - 921100
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| |||||||||||  |||||||||| || |  |||||||||||   ||| ||||  ||||| ||||| ||| |||||||| ||||| ||||||||    
T  921234 tttaagtttttcatttttttcaaagtcgtcttt-taagtttcaaaagtcttaaataagtccttttagtttttgaatcgtttcaaacaagtcctattgtag 921136  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||| |||||||||||||||||||||||    
T  921135 atagcatagttgataattgcttccttgaactcatct 921100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 28216893 - 28217003
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||| ||||||||||||| || ||| |  ||||||||||| | ||||||||  ||||| ||||| |||||||||||| ||||||||||||||    
T  28216893 tttaagtttttcgtttttcccaaagtggttctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaattgtttcaaacaagtcatattgtag 28216991  T
Q  202 ataacatagttg 213  Q
    ||||||||||||    
T  28216992 ataacatagttg 28217003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 17134404 - 17134307
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| | ||||||||  ||||| |||| |||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  17134404 gtttcaaaagtcccaaacaagtccttttagtttt-aaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 17134307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 1106525 - 1106622
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||  ||||||||  ||||| ||||| |||  ||||||||||||| ||||||||||| |||| ||| |||||||||||||||||||||||    
T  1106525 tttcaaaagttgcaaacaagtccttttagtttttgaatcatttcaaataagtcctattgtagatagcataattggtaattgcttccttgaactcatct 1106622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 9331968 - 9331846
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||||||||||| |||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||    
T  9331968 tttaagtttttcatttttcctaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtag 9331870  T
Q  202 ataacatagttgttaattgcttcc 225  Q
    |||  || |||| |||||||||||    
T  9331869 atagtattgttggtaattgcttcc 9331846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 29737900 - 29737826
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| |||||||||||| ||||| |||||| |||| |||||||| |||||||||||||||||||||||    
T  29737900 ttttagtttttgaattgtttcaaacaagtcctattgtcgatagcatagttgataattgcttccttgaactcatct 29737826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 34253318 - 34253220
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| || | ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||| ||||||||| |||||||||||||    
T  34253318 gtttcaaaggtcctaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgctttcttgaactcatct 34253220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 38751224 - 38751126
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| | ||||||||  ||||| ||||| ||| |||||||| ||||| || ||||||||  ||||||| |||||||||||||||||||||||    
T  38751224 gtttcaaaagtcctaaacaagtccttttagttttttaatcgtttcaaacaagtcctaatgtagatagtatagttggtaattgcttccttgaactcatct 38751126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 230
Target Start/End: Original strand, 43249321 - 43249468
Alignment:
Q  82 tcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtt 181  Q
    ||||||| || |||| ||| |||||| ||||||||||||||||||| ||  || |  ||||||||||||| ||||||||  ||||| ||||| ||| |||    
T  43249321 tcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtaatt-taagtttcaaaagttccaaacaagtccttttagtttttgaatcgtt 43249419  T
Q  182 tcaaataagtcatattgtagataacatagttgttaattgcttccttgaa 230  Q
    || || ||||| |||||  |||| |||||||| |||||| |||||||||    
T  43249420 tcgaacaagtcctattgatgatagcatagttggtaattgtttccttgaa 43249468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 3430527 - 3430687
Alignment:
Q  75 ttaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattttta 174  Q
    |||| ||||||||| || |||| ||  |||||| ||||| ||||||| ||||| ||| ||| ||  ||||||||| | ||||||||  |  || |||||     
T  3430527 ttaaaggtcaaatgcatctaaaggttctttaagtttttcgtttttcctaaagtggtctttaagt--ttcaaaagtcccaaacaagtcctactagtttttg 3430624  T
Q  175 aattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||   |||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  3430625 aataagttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 3430687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 41177964 - 41178061
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgta 200  Q
    |||||| |||||||||||||||||||||||||| |  ||||||||||| | |||||| | |||||| ||||| ||| |||||||| ||||| |||||||    
T  41177964 tttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaaatcattttagtttttgaatcgtttcaaacaagtcctattgta 41178061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 45124324 - 45124197
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    |||||||||||  |||||| |||||| |  |||||||||||   |||||| || ||||| ||||| ||| |||||||| || || ||||||||||| |||    
T  45124324 ttttcatttttttcaaagtagtcctt-taagtttcaaaagtctcaaacaaattcttttagtttttgaatcgtttcaaacaaatcttattgtagatagcat 45124226  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||| |||||| |||||||||    
T  45124225 agttggtaattgtttccttaaactcatct 45124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 7297199 - 7297297
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   ||||||||  |||||  |||| ||| |||||||| ||||||||||||||||| |||||||| ||||||  | |||||||||||||    
T  7297199 gtttcaaaagtctcaaacaagtccttttagattttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgtcttcttgaactcatct 7297297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 23673196 - 23673117
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    ||||||||| || |||||||| |||||| ||||| |||||||||||||||||||| |  ||||||||| ||| ||||||||    
T  23673196 ggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaaattccaaacaagt 23673117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 7297566 - 7297476
Alignment:
Q  69 aattaattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    |||||||||| |||||||| ||| |||||||||| |||| ||||| ||||| |||||||||| ||| |  ||||||||||| | ||||||||    
T  7297566 aattaattaaaggtcaaatttatctaaaagtcttataagtttttcgttttttccaaagtcgt-cttttaagtttcaaaagtcccaaacaagt 7297476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 8396572 - 8396614
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  8396572 attgtagatagcatagttgataattgcttccttgaactcatct 8396614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 37654224 - 37654186
Alignment:
Q  199 tagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  37654224 tagataacatagttggtaattgcttccttgaactcatct 37654186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 9276393 - 9276446
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    |||||||| || |||| ||| |||||| ||||||||||||||||||||||||||    
T  9276393 gtcaaatgcatataaatgtcctttaagtttttcatttttcccaaagtcgtcctt 9276446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 9331584 - 9331637
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    |||||||| || |||| ||| |||||| ||||||||||||||||||||||||||    
T  9331584 gtcaaatgcatataaatgtcctttaagtttttcatttttcccaaagtcgtcctt 9331637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 28650751 - 28650671
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagtt 161  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||||| |||||||||    
T  28650751 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagttgtcctt-taagtttcaaaagttccaaacaagtt 28650671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 33107292 - 33107222
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttc 151  Q
    ||||||||| || |||| ||| |||||| ||||| |||||||||||||||||||| |  |||||||||||||    
T  33107292 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt-taagtttcaaaagttc 33107222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 920840 - 920894
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||||||||||    
T  920840 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt 920894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 19916008 - 19916050
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||| ||||||||||||||||    
T  19916008 attgtagatagcatagttggtaattggttccttgaactcatct 19916050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 31214140 - 31214086
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || |||| |||||||||| ||||| ||||||||||||| ||||||    
T  31214140 ggtcaaatgcatctaaaggtcttttaagtttttcgtttttcccaaagtggtcctt 31214086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 3358194 - 3358157
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaa 176  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  3358194 gtttcaaaagttccaaacaagtcattttaatttttaaa 3358157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 3430860 - 3430807
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    ||||||||||||| |||||||| |||||| ||||| ||| |||||||| |||||    
T  3430860 gtttcaaaagttccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 3430807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 11949665 - 11949612
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtc 192  Q
    ||||||||||| ||||||||||  ||||| ||||||||| |||||||| |||||    
T  11949665 gtttcaaaagtccaaaacaagtccttttagtttttaaatcgtttcaaacaagtc 11949612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 33865589 - 33865536
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    |||||||| || |||| |||||||||| ||||| ||||||||||||| ||||||    
T  33865589 gtcaaatgcatctaaaggtcttttaagtttttcgtttttcccaaagtggtcctt 33865536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 41500816 - 41500732
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattt 165  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||| |||||| |  ||||||||||| | |||||||| ||||    
T  41500816 ggtcaaatgcatctaaaggtcatttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtcattt 41500732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 772268 - 772158
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| |||||| ||| ||||| ||||||||||||| |||||| |  |||||||||||   ||||||||  ||||| ||||| ||| |    
T  772268 ggtcaaatgcatctaaatgtcttt-aagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatcg 772171  T
Q  180 tttcaaataagtc 192  Q
    ||||||| |||||    
T  772170 tttcaaacaagtc 772158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 2315298 - 2315246
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtc 131  Q
    ||||||||||||| |||| ||| |||||| ||||| |||||| ||||||||||    
T  2315298 tggtcaaatgtatctaaaggtcctttaagtttttcgtttttctcaaagtcgtc 2315246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 8899504 - 8899579
Alignment:
Q  84 aaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    |||||||| |||| ||  |||||| ||||||||||||||||| |||||||| |  ||||||||||| | ||||||||    
T  8899504 aaatgtatctaaaggttctttaagtttttcatttttcccaaaatcgtcctt-taagtttcaaaagtcccaaacaagt 8899579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 12760072 - 12759993
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    |||||||||||| |||| ||| |||||| ||||| ||||| |||||||||| ||| |  ||||||||||| | ||||||||    
T  12760072 ggtcaaatgtatctaaaggtcatttaagtttttcgttttttccaaagtcgt-cttttaagtttcaaaagtcccaaacaagt 12759993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 41178343 - 41178264
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaag 159  Q
    |||||||||| || |||| ||| |||||| ||||| ||||| |||||||||||||| |  ||||||||||| | |||||||    
T  41178343 tggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctt-taagtttcaaaagtcccaaacaag 41178264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 42629803 - 42629914
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || ||||  || |||||| ||||| |||||| |||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  42629803 ggtcaaatgcatctaaagatcctttaagtttttcgtttttctcaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 42629901  T
Q  180 tttcaaataagtc 192  Q
    ||||||| |||||    
T  42629902 tttcaaacaagtc 42629914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 233
Target Start/End: Complemental strand, 2707694 - 2707541
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  |||||||||||   ||||||||  ||||| ||||| |||     
T  2707694 tggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaatc 2707596  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactc 233  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||    
T  2707595 gtttcaaacaagtcctattgtagatatcatagttggtaattgcttccttgaactc 2707541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 1915251 - 1915406
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| |||||||||||||||||||||||||| |  ||||| ||||| | ||||||||  ||||| ||||| ||| |    
T  1915251 ggtcaaatgcat-taaaggtcctttaagtttttcatttttcccaaagtcgtcctt-taagtttccaaagtcccaaacaagtccttttagtttttgaatag 1915348  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  1915349 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 1915406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 30379251 - 30379095
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| ||| |||||| ||||| ||||||||||||| ||| || |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  30379251 ggtcaaatgtatctaaaggtcctttaagtttttcgtttttcccaaagtggtcatt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 30379153  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  30379152 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 30379095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 9382755 - 9382597
Alignment:
Q  78 atggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||||| || |||| ||| |||||| ||||  ||||||||||||| |||||| |  ||||||||||||| ||||||||  ||||| ||||| |||    
T  9382755 atggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctt-taagtttcaaaagttccaaacaagtccttttagtttttgaat 9382657  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| |  ||||||||||||||||| |||||||||||||||||||||||    
T  9382656 cgtttcaaacaagtcctgatgtagataacatagttggtaattgcttccttgaactcatct 9382597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 29050508 - 29050350
Alignment:
Q  79 tggtcaaatgtatgtaaaagtc-ttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    |||||||||| || |||| ||| ||||||| ||||| ||||||||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| |||    
T  29050508 tggtcaaatgcatctaaaggtccttttaagtttttcgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaat 29050410  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  29050409 cgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 29050350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 6503952 - 6503796
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| || ||| ||||||||||| |||||||||||||| |  |||||||||||   ||||||||  ||||| ||||||||| |    
T  6503952 ggtcaaatgcatttaaaggtccttcaagtttttcattttttccaaagtcgtcctt-taagtttcaaaagtctcaaacaagtccttttagtttttaaatcg 6503854  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| |||||    
T  6503853 tttcaaacaagtcctattgtagatatcatagttggtaattgcttccttgaacccatct 6503796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 17428238 - 17428335
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||| ||||||||  ||||| ||||| ||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  17428238 tttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatct 17428335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 237
Target Start/End: Complemental strand, 1077478 - 1077315
Alignment:
Q  73 aattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttt 172  Q
    |||||| |||||||||  | |||| ||| |||||| ||||| ||||||| ||||| ||| || |  |||||||||||   ||||||||  ||||| ||||    
T  1077478 aattaaaggtcaaatgcgtctaaaggtcctttaagtttttcgtttttcctaaagtggtcatt-taagtttcaaaagtctcaaacaagtccttttagtttt 1077380  T
Q  173 taaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    | ||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  1077379 tgaatcgtttcaaataagtcatgttgtagatagcatagttggtaattgcttccttgaactcatct 1077315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 8178156 - 8178310
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| ||  ||| ||| |||||| |||||||||||| ||||||||||||| |  |||| |||||| | ||||||||  ||||| ||||| ||| |    
T  8178156 ggtcaaatgcatccaaaggtcctttaagtttttcatttttctcaaagtcgtcctt-taagttttaaaagtcccaaacaagtccttttagtttttgaatcg 8178254  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| | ||| ||||||||||| |||||||| |||||||||||||||||||||    
T  8178255 tttcaaacatgtcctattgtagatagcatagttggtaattgcttccttgaactcat 8178310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 25820452 - 25820610
Alignment:
Q  76 taatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaa 175  Q
    ||||||||||||| || ||||  || |||||| || |||||||||| ||| |||||||| |  ||||||||||| | |||||||| |||||||||||| |    
T  25820452 taatggtcaaatgcatctaaagatcgtttaagtttatcatttttcctaaactcgtcctt-taagtttcaaaagtcccaaacaagtcattttaatttttta 25820550  T
Q  176 attgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    || |||||||| || || ||| ||||||| |||||||| |||||||||| ||||||||||    
T  25820551 atcgtttcaaacaattcctatcgtagatagcatagttggtaattgcttcattgaactcat 25820610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 17943271 - 17943114
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||  ||||||||||||| |||||| |  ||||||||||| | |||||||| |||||| ||||| |||     
T  17943271 tggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctt-taagtttcaaaagtcccaaacaagtcattttagtttttgaatc 17943173  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||| || |||||||| |||| ||| ||||||||||||| |||||||||    
T  17943172 gtttcaaacaagtcctaatgtagatagcataattggtaattgcttccttaaactcatct 17943114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 2390441 - 2390343
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| | |||||| |  ||||| ||||| ||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  2390441 gtttcaaaagtcccaaacaaatccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatct 2390343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 2598007 - 2598162
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||||||||||||||||| ||| ||| || ||  ||| ||   ||||||||  ||||| ||||| ||| |    
T  2598007 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtctttaagtttt--aaaggtctcaaacaagtccttttagtttttgaatcg 2598104  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||  ||||||||||||    
T  2598105 tttcaaacaagtcatattgtagatatcatagttggtaattgctttattgaactcatct 2598162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 3258714 - 3258871
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| ||||| ||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  3258714 ggtcaaatgcatataaaggtcctttaagtttttcgttttttccaaagtggtcctt-taagtttcaaaagtcccaaacaagtctttttagtttttgaatcg 3258812  T
Q  180 tttcaaataagtcatattgtagataacatag-ttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||  ||||||||||| ||||| ||| |||||||||||||||||||||||    
T  3258813 tttcaaacaagttctattgtagataccatagtttggtaattgcttccttgaactcatct 3258871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 235
Target Start/End: Complemental strand, 3408425 - 3408269
Alignment:
Q  79 tggtcaaatgtatgtaaaagtc-ttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    |||||||||| || |||| ||| ||||||| ||||  |||||| | |||| |||||| |  |||||||||||   ||||||||| ||||| ||||| |||    
T  3408425 tggtcaaatgcatttaaaggtccttttaagttttttgtttttctcgaagtggtcctt-taagtttcaaaagtctcaaacaagttcttttagtttttgaat 3408327  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
     |||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||    
T  3408326 cgtttcaaacaagtcatattgtagatagtatagttggtaattgcttccttgaactcat 3408269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 12626870 - 12626714
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||| |||||| ||||| |||  |||||||| |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  12626870 ggtcaaatgcatctaaaggtcctttaagtttttcgtttcccccaaagtggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 12626772  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| |||||||||||  ||||||| |||||||||||||||||| ||||    
T  12626771 tttcaaacaagtcctattgtagatagaatagttggtaattgcttccttgaacttatct 12626714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 26392916 - 26393072
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    |||||||||||| |||| ||| |||||| |||||||||||| |||||| |||||  |  |||||||| ||   ||||||||  ||||| ||||| ||| |    
T  26392916 ggtcaaatgtatctaaaggtcctttaagtttttcatttttcacaaagtggtcctc-taagtttcaaaggtctcaaacaagtccttttagtttttgaatcg 26393014  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| || |  ||||||||||| |||||||| |||||||||||||||||||||||    
T  26393015 tttcaaaaaacttctattgtagatagcatagttggtaattgcttccttgaactcatct 26393072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 10256449 - 10256315
Alignment:
Q  102 tttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtag 201  Q
    |||||| ||||| ||||||  ||||| |||||| |  |||||||||||   |||||||| |||||  ||||| ||| |||||||| ||||| ||||||||    
T  10256449 tttaagtttttcgtttttcttaaagtggtcctt-taagtttcaaaagtctcaaacaagtcattttcgtttttgaatcgtttcaaacaagtcctattgtag 10256351  T
Q  202 ataacatagttgttaattgcttccttgaactcatct 237  Q
    ||| |||||||| |||||||||||||||||||||||    
T  10256350 atagcatagttggtaattgcttccttgaactcatct 10256315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 31376153 - 31375995
Alignment:
Q  80 ggtcaaatgtatgtaaaagtc-ttttaagctttt-catttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaat 177  Q
    ||||||||| || |||||||| ||||||| |||| | |||||| ||||||  ||||| |  |||||||||||   ||||||||  ||||| ||||| |||    
T  31376153 ggtcaaatgcatctaaaagtccttttaagttttttcgtttttctcaaagtgatcctt-taagtttcaaaagtctcaaacaagtccttttagtttttgaat 31376055  T
Q  178 tgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
     |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  31376054 cgtttcaaacaagtcctattgtagatagcatagttgttaattgcttccttgaacttatct 31375995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 16193544 - 16193388
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||  || |||||||| |||||| ||||  ||||||||||| | |||||| |  ||||||||||| | ||||||||  ||||| ||||| ||| |    
T  16193544 ggtcaaatacatctaaaagtcctttaagttttttgtttttcccaaaatggtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 16193446  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||  || || |||||| ||||||| |||||||||||||||||||||||    
T  16193445 tttcaaacaagttctaatgcagataaaatagttggtaattgcttccttgaactcatct 16193388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 12612937 - 12613029
Alignment:
Q  140 tttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaact 232  Q
    |||||||||| | ||||||||  ||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||    
T  12612937 tttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 12613029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 11134072 - 11133951
Alignment:
Q  117 tttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgtta 216  Q
    ||||||||||| |||||| |  ||||||||||| | ||| ||||  ||||| ||||| ||| |||||||| ||||| ||| ||||||| ||||| || ||    
T  11134072 tttcccaaagtggtccttttaagtttcaaaagtcctaaataagtccttttagtttttgaatcgtttcaaacaagtcctatcgtagatagcatagatggta 11133973  T
Q  217 attgcttcc-ttgaactcatct 237  Q
    ||||||||| ||||||||||||    
T  11133972 attgcttcctttgaactcatct 11133951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 26230840 - 26230995
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||||||| |||||| ||||| |||||  |||| | ||| ||| || ||  ||||||   |||||| | |||||| ||||| ||| |    
T  26230840 ggtcaaatgcatctaaaagtcgtttaagtttttcgtttttttcaaaatggtctttaagtttt--aaaagtctcaaacaaatcattttagtttttgaatcg 26230937  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||| ||||| || |||| |||||||||||| || || |||||||||||||||||    
T  26230938 tttcaaacaagtcctaatgtaaataacatagttggtagtttcttccttgaactcatct 26230995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 6785008 - 6785159
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattg 179  Q
    ||||||||| || |||| ||  |||||| ||||| |||||  |||||| |||||| | ||||||||||||   ||||||||  ||||| ||||| ||| |    
T  6785008 ggtcaaatgcatctaaaggttctttaagtttttcgtttttttcaaagtggtcctt-tatgtttcaaaagtctcaaacaagtctttttagtttttgaatcg 6785106  T
Q  180 tttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcat 235  Q
    ||||||| ||||| || ||||||||||||| |||    ||||||||||||||||||    
T  6785107 tttcaaacaagtcctaatgtagataacataattg---gttgcttccttgaactcat 6785159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 26196286 - 26196385
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatag-ttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   |||||| | |||||| ||||| ||| | |||||  ||||| ||||||||||||||||| ||| ||||||||||| |||||||||||    
T  26196286 gtttcaaaagtctcaaacaaatcattttagtttttgaatcggttcaaccaagtcctattgtagataacatagtttggtaattgcttccgtgaactcatct 26196385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 35223919 - 35223962
Alignment:
Q  194 tattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  35223919 tattgtagatagcatagttggtaattgcttccttgaactcatct 35223962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 35224214 - 35224160
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || |||||||| |||||| ||||| ||||||||||||||||||||    
T  35224214 ggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagtcgtcctt 35224160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 1915667 - 1915587
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    |||||||||| || |||||||| |||||  ||||| ||||| |||||||||||||| |  ||||||||||||| ||||||||    
T  1915667 tggtcaaatgcatctaaaagtcctttaaatttttcgttttttccaaagtcgtcctt-taagtttcaaaagttccaaacaagt 1915587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 2707305 - 2707417
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||| ||||| |||||||||||||| |  ||| ||||||| | ||||||||  ||||| ||||| |||     
T  2707305 tggtcaaatgcatataaaggtcctttaagtttttcgttttttccaaagtcgtcctt-taagttccaaaagtcccaaacaagtccttttagtttttgaatc 2707403  T
Q  179 gtttcaaataagtc 192  Q
    |||||||| |||||    
T  2707404 gtttcaaacaagtc 2707417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 10931084 - 10931210
Alignment:
Q  109 ttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacat 208  Q
    ||||| ||||||| ||||| |||||| |  ||||||||||||| |||||| |  ||||| ||||| ||| || ||||| ||||| || ||| |||| |||    
T  10931084 ttttcgtttttcctaaagtggtcctt-taagtttcaaaagttccaaacaaatacttttagtttttgaatcgtatcaaacaagtcctaatgtggatagcat 10931182  T
Q  209 agttgttaattgcttccttgaactcatct 237  Q
    ||||| |||||| || |||||||||||||    
T  10931183 agttg-taattgttttcttgaactcatct 10931210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 12612813 - 12612911
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||   ||||||||  ||||| ||||| |||  ||||||| ||||| ||||||||||| || ||||  || ||||||| ||||||||||||    
T  12612813 gtttcaaaagtctcaaacaagtccttttagtttttgaatcatttcaaacaagtcctattgtagatagcaaagttagtacttgcttcattgaactcatct 12612911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 26393332 - 26393278
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || |||| ||| |||||| ||||| ||||||||||||||||||||    
T  26393332 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctt 26393278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 26936727 - 26936685
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||| ||||||||||||||||    
T  26936727 attgtagatagcatagttgataattgtttccttgaactcatct 26936685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 1077052 - 1077131
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    |||||||||||| |||| |||||||||  |||||||||||  |||||| |||||| |  ||||||||||| | ||||||||    
T  1077052 ggtcaaatgtatctaaatgtcttttaaatttttcatttttttcaaagtggtcctt-taagtttcaaaagtcccaaacaagt 1077131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 4934 - 5090
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||||||| |||||| ||||| |||| || ||||| |||||| |  ||||||||||| ||||||||||  ||||| ||||| |||     
T  4934 tggtcaaatgcatctaaaagtcctttaagtttttcgttttacc-aaagtggtcctt-taagtttcaaaagtccaaaacaagtccttttagtttttgaatc 5031  T
Q  179 gtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||| ||||||||||||||||| |||||||| |||||| || |||||||||||||    
T  5032 gtttcaaacaagtcatattgtagatagcatagttggtaattgttttcttgaactcatct 5090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 219118 - 218964
Alignment:
Q  82 tcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgtt 181  Q
    ||||||| || |||| ||| |||||| ||||||||||||  ||||| ||| || |  ||||||||||| | ||||||||  ||||||||||  ||| |||    
T  219118 tcaaatgcatctaaaggtcctttaagtttttcatttttcttaaagtggtcttt-taagtttcaaaagtcccaaacaagtccttttaattttcgaatcgtt 219020  T
Q  182 tcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  219019 tcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatct 218964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 5427 - 5263
Alignment:
Q  72 taattaatggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaattt 171  Q
    |||| |||||||||||| || |||| ||| |||||| ||||| ||||| | ||||| |||||| |  |||| ||||||   |||||| |  ||||| |||    
T  5427 taataaatggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaagtggtcctt-taagttttaaaagtcacaaacaaatccttttagttt 5329  T
Q  172 ttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    || ||| |||||||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  5328 ttgaatcgtttcaaacaagtcatgttgtagatagcataattgttaattgcttccttgaactcatct 5263  T

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Target: scaffold0952 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 3280 - 3434
Alignment:
Q  81 gtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaattgt 180  Q
    |||||||| || |||| ||  |||||| ||||||||||| |||||||  ||||| |  ||||||||| | |||| ||||| |||||| ||||| ||| ||    
T  3280 gtcaaatgcatctaaaggtgctttaagtttttcattttttccaaagtgatcctt-taagtttcaaaaatccaaa-caagtcattttagtttttgaatcgt 3377  T
Q  181 ttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||||| || ||| |||| |||||||| |||||||||||||||||||||||    
T  3378 ttcaaataagtcctaatgttgatagcatagttggtaattgcttccttgaactcatct 3434  T

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Target: scaffold0184 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 13257 - 13173
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||  ||||| ||||| ||| |||||||| ||||||||||||||||| |||| ||| ||||| |||||||||||||||||    
T  13257 aaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcataattgataattccttccttgaactcatct 13173  T

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Target: scaffold0078 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 59587 - 59671
Alignment:
Q  153 aaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||  ||||| ||||| ||| |||||||| ||||||||||||||||| |||| ||| ||||| |||||||||||||||||    
T  59587 aaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcataattgataattccttccttgaactcatct 59671  T

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Target: scaffold0096 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 48138 - 48043
Alignment:
Q  139 gtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactca 234  Q
    ||||||||||| ||||||||||  ||||| ||||| ||| |||| ||| |||||  |||||| || ||||||||| ||||||||||||||||||||    
T  48138 gtttcaaaagtccaaaacaagtccttttagtttttgaatcgttttaaacaagtccgattgtatatcacatagttggtaattgcttccttgaactca 48043  T

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Target: scaffold0717 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 1994 - 1895
Alignment:
Q  138 tgtttcaaaagttcaaaacaagttattttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||||||||||   ||||||||  ||||| ||||| ||| |||||||| ||||| || ||| |||| |||||||| ||||||||||||||| |||||||    
T  1994 tgtttcaaaagtctcaaacaagtcgttttagtttttgaatcgtttcaaacaagtcctaatgttgatagcatagttgataattgcttccttgacctcatct 1895  T

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Target: scaffold1986 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 266 - 192
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| ||||| || |||||||| |||||| | |||||||||||||||||||||||    
T  266 ttttagtttttgaatcgtttcaaacaagtcctaatgtagatagcatagtcggtaattgcttccttgaactcatct 192  T

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Target: scaffold0338 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 5835 - 5729
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagttattttaatttttaaatt 178  Q
    |||||||||| || |||| ||| |||||| ||||  |||||||||||||||||||| |  ||||||||||| | ||||||||  ||||| ||||| | ||    
T  5835 tggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctt-taagtttcaaaagtcccaaacaagtccttttagtttttgattt 5737  T
Q  179 gtttcaaa 186  Q
    ||||||||    
T  5736 gtttcaaa 5729  T

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Target: scaffold1562 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 691 - 617
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| ||||| || |||  ||| |||||||| |||||||||||||||||||||||    
T  691 ttttagtttttgaatcgtttcaaacaagtcctaatgttaatagcatagttggtaattgcttccttgaactcatct 617  T

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Target: scaffold1158 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 1902 - 1976
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||| ||| |||||||| ||||| || |||  ||| |||||||| |||||||||||||||||||||||    
T  1902 ttttagtttttgaatcgtttcaaacaagtcctaatgttaatagcatagttggtaattgcttccttgaactcatct 1976  T

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Target: scaffold0542 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 1994 - 2036
Alignment:
Q  195 attgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  1994 attgtagatagcatagttggtaattgcttccttgaactcatct 2036  T

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Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 11183 - 11237
Alignment:
Q  80 ggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtcctt 134  Q
    ||||||||| || ||||||||||||||| ||||| ||||||||||||| ||||||    
T  11183 ggtcaaatgcatctaaaagtcttttaagtttttcgtttttcccaaagtggtcctt 11237  T

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Target: scaffold0122; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 11510 - 11436
Alignment:
Q  163 ttttaatttttaaattgtttcaaataagtcatattgtagataacatagttgttaattgcttccttgaactcatct 237  Q
    ||||| ||||||||| |||| ||||||| | |||||||| || |||||||| ||||||||||||| |||| ||||    
T  11510 ttttagtttttaaatcgttttaaataagacctattgtaggtagcatagttggtaattgcttccttaaacttatct 11436  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 101325 - 101245
Alignment:
Q  79 tggtcaaatgtatgtaaaagtcttttaagcttttcatttttcccaaagtcgtccttatgtgtttcaaaagttcaaaacaagt 160  Q
    |||||||||| || |||| ||| |||||| ||||| ||||| |||||||||||||| |  ||||||||||| | ||||||||    
T  101325 tggtcaaatgcatctaaaggtcatttaagtttttcgttttttccaaagtcgtcctt-taagtttcaaaagtcccaaacaagt 101245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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