View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11703_high_98 (Length: 237)
Name: NF11703_high_98
Description: NF11703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11703_high_98 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 49 - 225
Target Start/End: Original strand, 35721869 - 35722045
Alignment:
| Q |
49 |
accaaccacaccagttacttcttccaccaccataactactactagtactacttgcaccacctctattacaaatatgaatagccacatggcaattcaaact |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
35721869 |
accaaccacaccagttacttcttccaccaccataactactactagtactacttgcaccacctctattacaaatatgaatagcaacatggcaattcaaact |
35721968 |
T |
|
| Q |
149 |
cctcttcaagttggtgatcacaaaagcattccttcatctctatatcaagctctaattcatccaccatctctgcttct |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
35721969 |
cctcttcaagttggtgatcacaaaagcattccttcatctctatatcaagctctaattcatccaccatctttgcttct |
35722045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University