View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11703_low_111 (Length: 225)
Name: NF11703_low_111
Description: NF11703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11703_low_111 |
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Alignment Details
Target: chr7 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 18799547 - 18799395
Alignment:
| Q |
64 |
tcaccacggtggttgaaaagtacttgtaaca----aattaaaaattatgcttttgtcacgtagatatcagtctcatatttgcatttccaagtttctaatt |
159 |
Q |
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| T |
18799547 |
tcaccacggtggttgaaaagtacttgtaatttgttacttaaaaattatgcttttgtcacgtagatatcagtctcatatttgcatttccaagtttcttatt |
18799448 |
T |
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| Q |
160 |
gtccattcacacacaa-aaaacaaaatgttattttggaatctctggttgtttt |
211 |
Q |
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||||| |||||||||| |||| ||||||||||||||||||||||||||||||| |
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| T |
18799447 |
gtccaatcacacacaaaaaaataaaatgttattttggaatctctggttgtttt |
18799395 |
T |
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