View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11703_low_63 (Length: 310)
Name: NF11703_low_63
Description: NF11703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11703_low_63 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 7132445 - 7132163
Alignment:
| Q |
20 |
tcagactccaacaaagcagcatgtgatacaaacatattcacaatcaaatctcttcctaaatgggatgctttagcatttatttattt-caacatctattat |
118 |
Q |
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| T |
7132445 |
tcagattccaacaaagcagcatgtgatacaaacatattcacaatcaaatctcttcctaaatgggatgctttagcatttatttattttcaacatctattat |
7132346 |
T |
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| Q |
119 |
acaacaattcaggtttgacttttatttcaaaaattaaaagacaca--actctctaaagtacaacttaaaatataaaacatagacactaaaatttaattat |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7132345 |
acaacaattcaggtttgacttttatttcaaaaattaaaagacacataactctctaaagtacaacttaaaatataaaacatagacactaaaatttaattat |
7132246 |
T |
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| Q |
217 |
atgatcatataattatacatcaggcataaacagtgggaatcaaacacaaatcacttttctttccaatagccagtccatgatgt |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
7132245 |
atgatcatataattatacatcaggcataaacagtgggaatcaaacacaaatcacttttctttccaatagccaatccataatgt |
7132163 |
T |
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