View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11704_high_12 (Length: 345)

Name: NF11704_high_12
Description: NF11704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11704_high_12
NF11704_high_12
[»] chr2 (38 HSPs)
chr2 (17-323)||(5700058-5700351)
chr2 (246-323)||(7815425-7815502)
chr2 (254-323)||(13121708-13121777)
chr2 (19-108)||(19261716-19261803)
chr2 (246-323)||(29867809-29867885)
chr2 (246-323)||(34139923-34139999)
chr2 (246-323)||(36773502-36773578)
chr2 (251-324)||(723901-723973)
chr2 (246-323)||(4503285-4503360)
chr2 (246-323)||(5723407-5723482)
chr2 (246-323)||(11690441-11690517)
chr2 (251-324)||(14633983-14634055)
chr2 (252-313)||(17450540-17450601)
chr2 (246-323)||(42362292-42362368)
chr2 (251-307)||(17057526-17057582)
chr2 (251-307)||(17085509-17085565)
chr2 (251-307)||(36318166-36318222)
chr2 (251-323)||(39284825-39284896)
chr2 (246-323)||(2334570-2334645)
chr2 (246-323)||(11151743-11151819)
chr2 (251-320)||(12123741-12123810)
chr2 (261-322)||(24885602-24885662)
chr2 (246-323)||(38312180-38312256)
chr2 (246-323)||(45099695-45099770)
chr2 (252-319)||(11049493-11049560)
chr2 (259-320)||(11067248-11067308)
chr2 (37-91)||(13266913-13266969)
chr2 (246-323)||(36205816-36205891)
chr2 (259-307)||(33162615-33162663)
chr2 (251-319)||(35447041-35447108)
chr2 (289-323)||(12632908-12632942)
chr2 (140-242)||(13266987-13267089)
chr2 (251-319)||(1631889-1631956)
chr2 (259-323)||(36988241-36988303)
chr2 (246-314)||(45726878-45726945)
chr2 (251-319)||(24397997-24398066)
chr2 (246-319)||(42288262-42288334)
chr2 (271-323)||(14202584-14202635)
[»] chr5 (35 HSPs)
chr5 (22-244)||(42954776-42954998)
chr5 (246-323)||(533709-533785)
chr5 (246-323)||(5887568-5887644)
chr5 (246-307)||(8566098-8566159)
chr5 (246-323)||(28750807-28750883)
chr5 (246-307)||(42426387-42426448)
chr5 (246-307)||(42428582-42428643)
chr5 (246-312)||(16641092-16641158)
chr5 (246-323)||(13343001-13343076)
chr5 (246-323)||(25412702-25412777)
chr5 (246-307)||(32636779-32636840)
chr5 (246-323)||(36074197-36074272)
chr5 (246-323)||(39468701-39468777)
chr5 (251-323)||(13239692-13239762)
chr5 (137-209)||(15026936-15027008)
chr5 (251-323)||(19806324-19806394)
chr5 (251-323)||(31182913-31182984)
chr5 (251-307)||(42926848-42926904)
chr5 (246-313)||(13695843-13695910)
chr5 (246-319)||(213409-213481)
chr5 (246-323)||(3075810-3075886)
chr5 (246-307)||(13488158-13488219)
chr5 (246-323)||(30182529-30182604)
chr5 (246-323)||(30683073-30683148)
chr5 (251-307)||(33831635-33831691)
chr5 (246-305)||(537982-538041)
chr5 (246-319)||(28278260-28278332)
chr5 (246-319)||(40147205-40147277)
chr5 (246-307)||(42310087-42310148)
chr5 (283-319)||(3325857-3325893)
chr5 (251-323)||(37439074-37439144)
chr5 (246-313)||(5057997-5058063)
chr5 (265-314)||(9049512-9049561)
chr5 (246-319)||(27637765-27637838)
chr5 (129-181)||(5232420-5232472)
[»] chr8 (50 HSPs)
chr8 (19-244)||(36315875-36316100)
chr8 (19-245)||(11364458-11364681)
chr8 (246-324)||(30291544-30291622)
chr8 (21-236)||(26998274-26998489)
chr8 (20-178)||(9617810-9617972)
chr8 (246-314)||(8965843-8965911)
chr8 (246-320)||(18141763-18141837)
chr8 (246-323)||(4731598-4731674)
chr8 (19-80)||(17011624-17011685)
chr8 (19-80)||(17545516-17545577)
chr8 (246-323)||(33352090-33352166)
chr8 (246-323)||(43036363-43036439)
chr8 (246-323)||(15212726-15212802)
chr8 (246-307)||(27811233-27811294)
chr8 (251-323)||(4743360-4743431)
chr8 (246-324)||(8153700-8153780)
chr8 (246-323)||(17982593-17982668)
chr8 (246-323)||(31218197-31218272)
chr8 (263-324)||(41365016-41365076)
chr8 (246-323)||(44303794-44303869)
chr8 (246-324)||(1292615-1292692)
chr8 (250-320)||(1746375-1746443)
chr8 (261-307)||(5689226-5689272)
chr8 (246-307)||(1345523-1345584)
chr8 (246-323)||(3303822-3303898)
chr8 (246-323)||(6598912-6598988)
chr8 (246-323)||(6674365-6674441)
chr8 (246-323)||(12702791-12702866)
chr8 (246-307)||(19945513-19945573)
chr8 (246-307)||(34254482-34254542)
chr8 (246-307)||(40321035-40321096)
chr8 (246-307)||(42498149-42498209)
chr8 (251-323)||(18106235-18106306)
chr8 (246-314)||(18655349-18655416)
chr8 (263-307)||(41366783-41366827)
chr8 (246-321)||(9765691-9765761)
chr8 (246-319)||(4283468-4283540)
chr8 (125-182)||(17011543-17011600)
chr8 (125-182)||(17545601-17545658)
chr8 (246-319)||(44353736-44353809)
chr8 (246-294)||(3772160-3772208)
chr8 (251-307)||(34256663-34256718)
chr8 (251-319)||(40221689-40221756)
chr8 (246-305)||(19491851-19491909)
chr8 (129-208)||(39721118-39721197)
chr8 (261-307)||(4162455-4162501)
chr8 (253-307)||(10929754-10929808)
chr8 (246-323)||(30143282-30143356)
chr8 (251-313)||(42435148-42435209)
chr8 (294-323)||(31513169-31513198)
[»] chr6 (28 HSPs)
chr6 (123-244)||(13436794-13436914)
chr6 (246-322)||(9183183-9183258)
chr6 (246-319)||(4045366-4045439)
chr6 (246-323)||(16452482-16452557)
chr6 (254-323)||(28137568-28137636)
chr6 (40-182)||(29181642-29181786)
chr6 (26-115)||(28983527-28983616)
chr6 (246-323)||(2171683-2171758)
chr6 (246-323)||(3039055-3039131)
chr6 (246-323)||(30834689-30834764)
chr6 (246-323)||(33211337-33211413)
chr6 (246-321)||(5406351-5406424)
chr6 (246-321)||(5410676-5410749)
chr6 (246-319)||(21593608-21593680)
chr6 (246-321)||(5413545-5413618)
chr6 (246-323)||(33160505-33160581)
chr6 (246-319)||(5043571-5043643)
chr6 (251-319)||(603237-603304)
chr6 (267-307)||(16567161-16567201)
chr6 (259-313)||(26830289-26830342)
chr6 (262-320)||(26954453-26954510)
chr6 (137-182)||(165904-165949)
chr6 (246-319)||(2973091-2973163)
chr6 (246-319)||(3808861-3808933)
chr6 (144-209)||(14003346-14003411)
chr6 (246-319)||(17762933-17763006)
chr6 (262-307)||(31404842-31404886)
chr6 (267-307)||(16568998-16569038)
[»] chr7 (56 HSPs)
chr7 (11-178)||(29346722-29346890)
chr7 (246-323)||(36146560-36146637)
chr7 (249-323)||(30843387-30843461)
chr7 (246-307)||(30024884-30024945)
chr7 (246-323)||(31733121-31733197)
chr7 (246-307)||(47674095-47674156)
chr7 (246-323)||(47676288-47676364)
chr7 (19-166)||(29367259-29367405)
chr7 (251-323)||(43864184-43864255)
chr7 (246-323)||(1113597-1113673)
chr7 (246-323)||(4586101-4586177)
chr7 (246-323)||(8153282-8153358)
chr7 (246-307)||(14069985-14070046)
chr7 (246-307)||(14380013-14380074)
chr7 (246-323)||(31105545-31105621)
chr7 (246-323)||(48491519-48491595)
chr7 (251-307)||(4538697-4538753)
chr7 (157-209)||(29292199-29292251)
chr7 (246-320)||(24526049-24526122)
chr7 (246-320)||(27347760-27347833)
chr7 (246-323)||(2761454-2761530)
chr7 (246-323)||(4178715-4178790)
chr7 (250-323)||(5514165-5514238)
chr7 (246-323)||(12098011-12098087)
chr7 (246-323)||(24514913-24514988)
chr7 (246-323)||(29990995-29991070)
chr7 (246-323)||(35853855-35853930)
chr7 (246-323)||(38671374-38671450)
chr7 (246-323)||(41317586-41317662)
chr7 (246-323)||(48408743-48408818)
chr7 (246-323)||(48489371-48489447)
chr7 (259-323)||(4253694-4253758)
chr7 (251-323)||(36574672-36574744)
chr7 (251-323)||(41649167-41649238)
chr7 (251-322)||(18126585-18126655)
chr7 (246-305)||(31518752-31518811)
chr7 (246-319)||(2361124-2361196)
chr7 (246-307)||(23554995-23555055)
chr7 (21-112)||(32471143-32471234)
chr7 (265-319)||(22328568-22328622)
chr7 (252-314)||(23343923-23343985)
chr7 (246-319)||(4508858-4508930)
chr7 (246-323)||(19502118-19502193)
chr7 (246-307)||(26417271-26417332)
chr7 (246-307)||(34310868-34310928)
chr7 (129-208)||(3756682-3756762)
chr7 (246-313)||(8359469-8359535)
chr7 (252-313)||(23565222-23565280)
chr7 (260-307)||(25767124-25767170)
chr7 (246-319)||(3258938-3259011)
chr7 (246-319)||(6431915-6431987)
chr7 (259-319)||(6360077-6360136)
chr7 (246-314)||(22269921-22269989)
chr7 (267-307)||(25615818-25615858)
chr7 (26-86)||(29293427-29293486)
chr7 (267-323)||(39731317-39731371)
[»] chr3 (53 HSPs)
chr3 (246-323)||(29196539-29196616)
chr3 (246-323)||(44700630-44700707)
chr3 (246-323)||(5236608-5236684)
chr3 (246-323)||(40734438-40734514)
chr3 (251-319)||(9666624-9666692)
chr3 (252-323)||(44331485-44331555)
chr3 (246-323)||(31314385-31314461)
chr3 (262-323)||(39153529-39153589)
chr3 (261-323)||(9581223-9581284)
chr3 (246-319)||(46860416-46860490)
chr3 (246-323)||(5258297-5258372)
chr3 (246-323)||(19684041-19684117)
chr3 (246-323)||(29682299-29682375)
chr3 (246-323)||(45095105-45095180)
chr3 (251-319)||(5434035-5434102)
chr3 (252-324)||(29810807-29810878)
chr3 (251-307)||(53921660-53921716)
chr3 (246-313)||(4569901-4569968)
chr3 (246-320)||(16498973-16499046)
chr3 (246-323)||(760787-760863)
chr3 (246-323)||(2075209-2075285)
chr3 (246-323)||(5260476-5260551)
chr3 (246-307)||(22835154-22835215)
chr3 (246-323)||(23392061-23392137)
chr3 (39-108)||(32756502-32756569)
chr3 (246-307)||(32891058-32891119)
chr3 (246-307)||(40735338-40735399)
chr3 (246-319)||(54593648-54593720)
chr3 (251-307)||(51398769-51398825)
chr3 (261-307)||(23410496-23410542)
chr3 (37-91)||(46506041-46506095)
chr3 (92-182)||(46506083-46506171)
chr3 (246-319)||(6095751-6095823)
chr3 (246-307)||(7762221-7762281)
chr3 (254-307)||(7764423-7764475)
chr3 (246-323)||(23198091-23198165)
chr3 (246-323)||(23200290-23200364)
chr3 (246-319)||(31340353-31340425)
chr3 (246-323)||(37408399-37408474)
chr3 (246-307)||(43401954-43402014)
chr3 (246-319)||(43403897-43403969)
chr3 (250-319)||(8166612-8166683)
chr3 (251-307)||(9636284-9636339)
chr3 (246-305)||(26386633-26386692)
chr3 (259-314)||(46173315-46173369)
chr3 (246-323)||(5373163-5373247)
chr3 (246-303)||(35138857-35138915)
chr3 (246-319)||(30236069-30236141)
chr3 (246-307)||(41819675-41819736)
chr3 (246-319)||(49199622-49199694)
chr3 (19-59)||(531231-531270)
chr3 (19-59)||(564186-564225)
chr3 (283-323)||(1313994-1314034)
[»] chr4 (52 HSPs)
chr4 (168-244)||(23407669-23407744)
chr4 (261-323)||(52467521-52467583)
chr4 (246-323)||(5429619-5429695)
chr4 (246-323)||(26175788-26175864)
chr4 (246-323)||(29254434-29254510)
chr4 (246-323)||(37229874-37229951)
chr4 (246-323)||(48142982-48143058)
chr4 (246-307)||(48893794-48893855)
chr4 (246-323)||(52095514-52095590)
chr4 (251-323)||(5871760-5871831)
chr4 (251-323)||(24969051-24969123)
chr4 (246-323)||(6542333-6542409)
chr4 (246-323)||(13009583-13009659)
chr4 (246-307)||(31474105-31474166)
chr4 (246-307)||(36994479-36994540)
chr4 (246-307)||(51337019-51337080)
chr4 (246-323)||(52082809-52082885)
chr4 (246-323)||(54200058-54200134)
chr4 (251-323)||(5207999-5208071)
chr4 (251-323)||(47038566-47038637)
chr4 (251-314)||(55085521-55085584)
chr4 (252-306)||(12745594-12745648)
chr4 (246-323)||(12739702-12739778)
chr4 (246-323)||(12747908-12747984)
chr4 (246-319)||(29056301-29056374)
chr4 (246-323)||(34570566-34570642)
chr4 (246-307)||(36463541-36463602)
chr4 (246-319)||(40632389-40632461)
chr4 (246-323)||(56178789-56178864)
chr4 (246-322)||(4587899-4587974)
chr4 (19-198)||(4578364-4578541)
chr4 (263-324)||(5349845-5349905)
chr4 (21-86)||(23406633-23406698)
chr4 (99-152)||(23407625-23407678)
chr4 (246-323)||(53345156-53345233)
chr4 (246-319)||(54882964-54883036)
chr4 (246-302)||(3913408-3913464)
chr4 (252-323)||(37740566-37740635)
chr4 (246-319)||(21688192-21688264)
chr4 (246-307)||(29999958-30000018)
chr4 (246-323)||(45687335-45687411)
chr4 (246-319)||(46703443-46703516)
chr4 (251-307)||(5370244-5370299)
chr4 (251-319)||(12119481-12119549)
chr4 (246-313)||(50673998-50674064)
chr4 (246-307)||(2209669-2209729)
chr4 (250-319)||(6655900-6655968)
chr4 (250-319)||(35662384-35662453)
chr4 (23-60)||(49272623-49272660)
chr4 (267-323)||(13992459-13992513)
chr4 (248-303)||(33089837-33089893)
chr4 (267-319)||(48142551-48142603)
[»] chr1 (52 HSPs)
chr1 (246-323)||(4552789-4552865)
chr1 (246-313)||(44650315-44650382)
chr1 (246-323)||(197060-197136)
chr1 (250-323)||(10925163-10925235)
chr1 (246-323)||(44455100-44455176)
chr1 (246-323)||(50167327-50167403)
chr1 (246-320)||(28265706-28265779)
chr1 (246-307)||(1833477-1833538)
chr1 (246-323)||(3847273-3847349)
chr1 (250-307)||(13138130-13138187)
chr1 (246-307)||(37503706-37503767)
chr1 (246-303)||(49918309-49918366)
chr1 (259-323)||(928142-928206)
chr1 (251-307)||(31659193-31659249)
chr1 (251-323)||(50169367-50169438)
chr1 (246-323)||(834319-834395)
chr1 (246-323)||(8550939-8551015)
chr1 (246-323)||(20762612-20762687)
chr1 (246-323)||(28223573-28223649)
chr1 (250-323)||(37282847-37282920)
chr1 (246-307)||(45644507-45644568)
chr1 (246-307)||(46064873-46064934)
chr1 (251-323)||(23555422-23555493)
chr1 (246-309)||(44646936-44646999)
chr1 (246-320)||(13659488-13659561)
chr1 (19-163)||(29274575-29274719)
chr1 (246-319)||(193555-193627)
chr1 (246-307)||(3156821-3156881)
chr1 (246-319)||(11348642-11348714)
chr1 (246-319)||(19754438-19754510)
chr1 (246-319)||(29136191-29136263)
chr1 (246-319)||(37033225-37033297)
chr1 (246-319)||(37879063-37879135)
chr1 (246-314)||(13547241-13547308)
chr1 (246-314)||(13549152-13549219)
chr1 (259-307)||(15820262-15820310)
chr1 (251-299)||(16455585-16455633)
chr1 (252-323)||(3189271-3189340)
chr1 (252-323)||(3198088-3198157)
chr1 (252-323)||(3206927-3206996)
chr1 (252-303)||(28220384-28220435)
chr1 (252-307)||(37560027-37560082)
chr1 (246-319)||(37168241-37168313)
chr1 (246-319)||(42298127-42298199)
chr1 (246-319)||(47115115-47115187)
chr1 (251-307)||(40122355-40122411)
chr1 (246-305)||(41360872-41360930)
chr1 (262-319)||(6808389-6808446)
chr1 (254-307)||(31925867-31925919)
chr1 (250-319)||(34603519-34603588)
chr1 (249-305)||(19752643-19752698)
chr1 (263-323)||(30476618-30476676)
[»] scaffold0016 (1 HSPs)
scaffold0016 (246-323)||(114543-114618)
[»] scaffold0006 (1 HSPs)
scaffold0006 (246-320)||(149249-149322)
[»] scaffold0286 (1 HSPs)
scaffold0286 (246-307)||(11513-11573)
[»] scaffold0466 (1 HSPs)
scaffold0466 (251-314)||(7276-7338)
[»] scaffold0027 (1 HSPs)
scaffold0027 (37-173)||(16415-16548)
[»] scaffold1519 (1 HSPs)
scaffold1519 (246-323)||(857-931)
[»] scaffold0066 (1 HSPs)
scaffold0066 (246-307)||(20567-20628)
[»] scaffold0129 (1 HSPs)
scaffold0129 (272-323)||(19117-19167)
[»] scaffold0002 (1 HSPs)
scaffold0002 (251-293)||(434501-434543)
[»] scaffold0491 (1 HSPs)
scaffold0491 (251-323)||(11320-11389)
[»] scaffold0014 (1 HSPs)
scaffold0014 (246-314)||(80435-80502)


Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 17 - 323
Target Start/End: Original strand, 5700058 - 5700351
Alignment:
Q  17 aaggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatctttt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||             |||||||||||||||||||||     
T  5700058 aaggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtagagtaatg-------------acttagtcttcttctatctttc 5700144  T
Q  117 ccttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttat 216  Q
    | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  5700145 ctttaatgtttctatgtaccaagaacatcaattttaattgagttctaatctatcaattttacctttcatttcacaatcaattcacgattattatttttat 5700244  T
Q  217 tccattataaattttaggaatcattacactttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctc 316  Q
    | ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5700245 ttcattataaattttaggaattattacattttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaagtgtttacaaatgtttctc 5700344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 7815425 - 7815502
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| |||||||||||||||| ||||| ||||||  |||| |||||||||||||||||||||||||||||    
T  7815425 tttctcaatctcaccaatgaacaagacacgcaatgattttcacccacctaaggtgtttacaaatgtttctcaacccaa 7815502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 13121777 - 13121708
Alignment:
Q  254 tctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| |||||||||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||||    
T  13121777 tctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaaatgtttcccaacccaa 13121708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 19261803 - 19261716
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttc 108  Q
    ||||||||||||||||||  |||||| ||||||||||||||| |||||| |||| ||||||||||| ||||||| |||||||||||||||    
T  19261803 ggtatgaagaaaaatgatgaaagtctatcctctctccctttgatactct-tagtagagtaatggctaagtctta-gacttagtcttcttc 19261716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 29867885 - 29867809
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  29867885 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 29867809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 34139923 - 34139999
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  34139923 tttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 34139999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 36773578 - 36773502
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  36773578 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 36773502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 723901 - 723973
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 324  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||    
T  723901 caatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaa 723973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 4503285 - 4503360
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  4503285 tttcccaatctctccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 4503360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 5723407 - 5723482
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  5723407 tttctcaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 5723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 11690517 - 11690441
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  11690517 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 11690441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 14633983 - 14634055
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 324  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||    
T  14633983 caatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaa 14634055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 17450601 - 17450540
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  17450601 aatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttgcaaatgttt 17450540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 42362368 - 42362292
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  42362368 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 42362292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 17057526 - 17057582
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  17057526 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 17057582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 17085509 - 17085565
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  17085509 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 17085565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 36318166 - 36318222
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  36318166 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 36318222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 39284896 - 39284825
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| ||||||||||||| |||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  39284896 caatctcaccaatgaacaagatactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 39284825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 2334570 - 2334645
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  2334570 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 2334645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 11151743 - 11151819
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| |||| || ||||||||||||| |||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  11151743 tttcccaatttcaccaatgaacaagagactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 11151819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 12123741 - 12123810
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    ||||||||| |||||||||||||||| ||| |||||| ||| |||||||||||| ||||||||| |||||    
T  12123741 caatctctcaaatgaacaagacactcgatgattttcactcatccaaggtgtttataaatgtttcccaacc 12123810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 24885662 - 24885602
Alignment:
Q  261 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca 322  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||    
T  24885662 aatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccca 24885602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 38312256 - 38312180
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||| |||||||| ||| |||||||| ||||||||    
T  38312256 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacacaaggtgtatac-aatgtttcccaacccaa 38312180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 45099770 - 45099695
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  45099770 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 45099695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 11049560 - 11049493
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||| ||||  |||||||||||||||| |||||| | |||||||||||||||||||||||| ||||    
T  11049560 aatctcaccaaaaaacaagacactcaatgattttcacttacccaaggtgtttacaaatgtttcccaac 11049493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 11067308 - 11067248
Alignment:
Q  259 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||| |||||||| |||||    
T  11067308 ccaatgaataagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacc 11067248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 13266913 - 13266969
Alignment:
Q  37 tgaagtctctcctctctccctttggtact--ctctagtcgagtaatggcttagtctt 91  Q
    |||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||    
T  13266913 tgaagtctctcctctctccctttggtactccctctagtagagtaacggcttagtctt 13266969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 36205816 - 36205891
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||  ||||||| ||||||||    
T  36205816 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-catgtttcccaacccaa 36205891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 33162615 - 33162663
Alignment:
Q  259 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  33162615 ccaatgaacaagacactcgatgattttcaatcacccaaggtgtttacaa 33162663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 35447041 - 35447108
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  35447041 caatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 35447108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 12632908 - 12632942
Alignment:
Q  289 tcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||||||||||||||||||||||||||    
T  12632908 tcacccaaggtgtttacaaatgtttctcaacccaa 12632942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 13266987 - 13267089
Alignment:
Q  140 aacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattccattataaattttaggaatca 239  Q
    |||||||||||||||||||||||||| ||||||||  |||||| |||  | |||  |||  ||||||||  |||||||||||| | ||||||  ||||||    
T  13266987 aacatcaattttaattgagttctaatatatcaattcaacctttgattccataattgatttgcaattatccattttattccattctcaattttgagaatca 13267086  T
Q  240 tta 242  Q
    |||    
T  13267087 tta 13267089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 1631889 - 1631956
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||| |||||||||||||||||| ||| |||||| || | |||||||||||||| |||||| ||||    
T  1631889 caatctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacaattgtttcccaac 1631956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 36988241 - 36988303
Alignment:
Q  259 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||  ||||||| ||||||||    
T  36988241 ccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-tatgtttcccaacccaa 36988303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 45726945 - 45726878
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    |||| ||||||| |||||||| |||||||||| || |||||| || |||||||||||||||| ||||||    
T  45726945 tttcccaatctcaccaatgaataagacactca-tgattttcactctcccaaggtgtttacaattgtttc 45726878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 24398066 - 24397997
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattc-acccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||| ||||||||||||||||||| || |||||| ||  || ||||||||||||| |||||| ||||    
T  24398066 caatctcaccaatgaacaagacactcattgattttcactcttccaaaggtgtttacaattgtttcccaac 24397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 42288262 - 42288334
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||| |||||||||||  || |||||| || |||||||||||||||| |||||| ||||    
T  42288262 tttcccaatctcaccaatgcacaagacactcg-tgattttcactctcccaaggtgtttacaattgtttcccaac 42288334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 14202584 - 14202635
Alignment:
Q  271 acactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||  |||||| ||||||||||||||||| |||||||| ||||||||    
T  14202584 acactcaataattttcactcacccaaggtgtttac-aatgtttcccaacccaa 14202635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 4e-63; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 22 - 244
Target Start/End: Complemental strand, 42954998 - 42954776
Alignment:
Q  22 atgaagaaaaatgattgaagtctctcctct--ctccctttggtactctctagtcgagtaatggcttagtcttatgactt-agtcttcttctatcttttcc 118  Q
    |||| ||||||||||  ||||| |||||||  |||||||||| |||||||| | ||||||||||| ||||||| ||||| |||||||||||||||||||     
T  42954998 atgatgaaaaatgatgaaagtcactcctctttctccctttgg-actctctaatagagtaatggctaagtctta-gactttagtcttcttctatcttttct 42954901  T
Q  119 ttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattc 218  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  42954900 ttaatgtttttatgtacctagaacatcaattttaattgagttctaatctatcaattttacctttcatttcacaatcaattcacaattatca-ttttattc 42954802  T
Q  219 cattataaattttaggaatcattaca 244  Q
    |||||| |||||||| || |||||||    
T  42954801 cattatcaattttagaaaccattaca 42954776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 533785 - 533709
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  533785 tttcccaatctcaccaatgaacaagacacgcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 533709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 5887568 - 5887644
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  5887568 tttctcaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 5887644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 8566098 - 8566159
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| | |||||||||||||||||||| |||||| |||||||||||||||||||    
T  8566098 tttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 8566159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 28750807 - 28750883
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||| ||||||||    
T  28750807 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttttc-aatgtttcccaacccaa 28750883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 42426387 - 42426448
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||    
T  42426387 tttctcaatctcaccaatgaacaagacactcaataattttcactcacccaaggtgtttacaa 42426448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 42428582 - 42428643
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  42428582 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 42428643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 16641092 - 16641158
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtt 312  Q
    |||||||||||| ||||||||||||||||| ||||  ||||| |||| |||||||||||||||||||    
T  16641092 tttctcaatctcgccaatgaacaagacacttaatgaatttcactcactcaaggtgtttacaaatgtt 16641158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 13343076 - 13343001
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  13343076 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 13343001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 25412777 - 25412702
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  25412777 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 25412702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 32636840 - 32636779
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  32636840 tttcccaatctcaccaatgaataagacactcaatgattttcactcacccaaggtgtttacaa 32636779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 36074197 - 36074272
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  36074197 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 36074272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 39468701 - 39468777
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |||| |||||||||||| |||||||| ||||||||    
T  39468701 tttcccaatctcactaatgaacaagacactcaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaa 39468777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 13239762 - 13239692
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  13239762 caatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 13239692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 15027008 - 15026936
Alignment:
Q  137 aagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatca 209  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||| || ||| |||| | ||||||||    
T  15027008 aagaacattaattttaattgagttctaatctatcaattttactcttcattcaataattaatttaaaattatca 15026936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 19806394 - 19806324
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| ||||||||||||||||||||||  ||||| ||||||||||||||||| |||||||| ||||||||    
T  19806394 caatctcaccaatgaacaagacactcaatg-atttcactcacccaaggtgtttac-aatgtttcccaacccaa 19806324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 31182984 - 31182913
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| | |||||||||||||||||||| |||||| ||||| ||||||||||| |||||||| ||||||||    
T  31182984 caatctcacaaatgaacaagacactcaatgattttcactcacctaaggtgtttac-aatgtttcccaacccaa 31182913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 42926904 - 42926848
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| |||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  42926904 caatctcaccaaagaacaagacactcaatgattttcactcacccaaggtgtttacaa 42926848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 13695843 - 13695910
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    |||| |||||||||||| ||| |||| |||||||| |||||| |||| ||||||||||||||||||||    
T  13695843 tttcccaatctctccaaagaaaaagatactcaatgattttcactcacacaaggtgtttacaaatgttt 13695910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 213481 - 213409
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  213481 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 213409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 3075810 - 3075886
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| | ||||||| |||||||||||| |||||| ||| | ||||||||||| |||||||| ||||||||    
T  3075810 tttctcaatctcacaaatgaacgagacactcaatgattttcactcatcaaaggtgtttac-aatgtttcccaacccaa 3075886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 13488219 - 13488158
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||  |||||||||||||||||||||  |||||| |||||||||||||||||||    
T  13488219 tttcccaatcttaccaatgaacaagacactcaataattttcactcacccaaggtgtttacaa 13488158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 30182604 - 30182529
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||| | |||||||| ||||||||    
T  30182604 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttgc-aatgtttcccaacccaa 30182529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 30683073 - 30683148
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  30683073 tttcccaatctcacaaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcgcaacccaa 30683148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 33831691 - 33831635
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| | |||||| ||||||||||||| |||||| |||||||||||||||||||    
T  33831691 caatctcacaaatgaataagacactcaatgattttcactcacccaaggtgtttacaa 33831635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 305
Target Start/End: Complemental strand, 538041 - 537982
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttac 305  Q
    |||| ||||||| | |||||||||||||| ||||| |||||| |||||||||||||||||    
T  538041 tttcccaatctcactaatgaacaagacacgcaatgattttcactcacccaaggtgtttac 537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 28278332 - 28278260
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || ||||| |||||||||| |||||| ||||    
T  28278332 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaatgtgtttacaattgtttcccaac 28278260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 40147277 - 40147205
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| ||| || || |||||||||||||||| |||||| ||||    
T  40147277 tttcccaatctcaccaatgaacaagacactc-atgatttccactctcccaaggtgtttacaattgtttcccaac 40147205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 42310087 - 42310148
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| ||||||| |||||||||||||| |||||| | ||||||  |||||||||    
T  42310087 tttctcaatctcaccaatgagcaagacactcaatgattttcacttacccaaaatgtttacaa 42310148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 3325893 - 3325857
Alignment:
Q  283 tttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3325893 tttcactcacccaaggtgtttacaaatgtttctcaac 3325857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 37439144 - 37439074
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||||||| ||||||||||||| |||||| ||| |||| |||||||| |||||||| ||||||||    
T  37439144 caatctcaccaatgaataagacactcaatgattttcactca-ccaaagtgtttac-aatgtttcccaacccaa 37439074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 5058063 - 5057997
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| ||  ||||||||||||||| |||||    
T  5058063 tttcccaatctcaccaatgaacaagacactc-atgattttcactcttccaaggtgtttacaattgttt 5057997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 9049512 - 9049561
Alignment:
Q  265 aacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    ||||||||||||| || |||| | |||||||| |||||||||||||||||    
T  9049512 aacaagacactcagtgatttttactcacccaaagtgtttacaaatgtttc 9049561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 27637765 - 27637838
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||| |||||||||||||||||||    |||||| ||  |||||||||| |||| |||||| ||||    
T  27637765 tttctcaatctcaccaatgaacaagacactcatgaattttcactcttccaaggtgttcacaattgtttcccaac 27637838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 5232420 - 5232472
Alignment:
Q  129 tatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctt 181  Q
    ||||||| || |||| ||| | |||||||||||| ||||||||||||||||||    
T  5232420 tatgtactaaaaacaccaactataattgagttcttatctatcaattttacctt 5232472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 244
Target Start/End: Complemental strand, 36316100 - 36315875
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatcttttcc 118  Q
    |||| |||||||||||||  || ||||||||||||||||||| ||||||||||| ||||||||  ||||||||| |||||| ||||||||||| |||||     
T  36316100 ggtaggaagaaaaatgatgaaaatctctcctctctccctttgatactctctagtagagtaatgatttagtcttaggacttaatcttcttctatgttttct 36316001  T
Q  119 ttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattc 218  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||| | |||| |||||||||||| | | || |||| | | ||| |||||| |||||||     
T  36316000 ttaatgtttatatgtaccaagaacataaattttaattgagttctcaactattaattttacctttaaataaataatccaattacatttatcaattttattt 36315901  T
Q  219 cattataaattttaggaatcattaca 244  Q
    |||| | ||||||  |||||||||||    
T  36315900 cattctcaattttgagaatcattaca 36315875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 245
Target Start/End: Complemental strand, 11364681 - 11364458
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta-gtcttatgacttagtcttcttctatcttttc 117  Q
    |||||||||||||||||   | || ||||||||| ||||||||||||||| ||| ||||||||||||| |||||  ||||| ||||||||||||||||||    
T  11364681 ggtatgaagaaaaatgacata-gtatctcctctc-ccctttggtactctcaagtagagtaatggcttaagtctttcgacttggtcttcttctatcttttc 11364584  T
Q  118 cttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttatt 217  Q
    |||    ||| ||||||| ||||||| |||||||||||| |||||||||  |||||||||||||| |||||| || ||||| ||||||||||  |||||     
T  11364583 ctttcccttt-tatgtactaagaacaccaattttaattgggttctaatccctcaattttacctttgatttaataaacaatttacaattatca-atttatc 11364486  T
Q  218 ccattataaattttaggaatcattacac 245  Q
     |||| | ||||||||||| ||||||||    
T  11364485 acattctcaattttaggaaccattacac 11364458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 30291622 - 30291544
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 324  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  30291622 tttctcaatctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttacaaatgtttcccaacccaaa 30291544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 26998274 - 26998489
Alignment:
Q  21 tatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatcttttcc-t 119  Q
    ||||||| ||||||||   |||||||| |||||| |||| ||||||||||||  |||||||||||||| ||| |||||||||||||||| | |||||| |    
T  26998274 tatgaagtaaaatgatgagagtctctcttctctctctttagtactctctagtaaagtaatggcttagttttaagacttagtcttcttctgtattttcctt 26998373  T
Q  120 taatgt-ttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattc 218  Q
    |  | | |||||||||  ||||||| ||| | | |||||||||  |||||||||||||| |||| | |||| |||||||| |||||||||  |||||||     
T  26998374 ttctctcttctatgtaataagaacaccaaatattattgagttc-gatctatcaattttatctttaagttaataatcaatt-acaattatccattttattt 26998471  T
Q  219 cattataaattttaggaa 236  Q
    |||| | |||||||||||    
T  26998472 cattctcaattttaggaa 26998489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 9617972 - 9617810
Alignment:
Q  20 gtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtc----gagtaatggcttagtcttatg-acttagtcttcttctatctt 114  Q
    ||||||||||||||||  ||||||| |||||||| ||| ||||||||||||||     |||||||| ||||   || || | ||||||||||||||||||    
T  9617972 gtatgaagaaaaatgaa-gaagtctttcctctcttcctgtggtactctctagtatagggagtaatgacttaagtttttgtatttagtcttcttctatctt 9617874  T
Q  115 ttccttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttac 178  Q
    ||| ||||| ||||||||||| || ||||||||||||||||  ||||| | |||||||||||||    
T  9617873 ttctttaatatttctatgtaccaaaaacatcaattttaattcggttctcaactatcaattttac 9617810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 8965843 - 8965911
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  8965843 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttc 8965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 18141837 - 18141763
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    |||| ||||||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||||| |||||    
T  18141837 tttcacaatctcaccaatgaacaagacactcaatgattttcactcgcccaaggtgtttacaaatgtttcccaacc 18141763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 4731674 - 4731598
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  4731674 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 4731598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 17011685 - 17011624
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaat 80  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  17011685 ggtatgaagaaaaatgatgcaagtctctcctctctccctttggtactctctagtagagtaat 17011624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 17545516 - 17545577
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaat 80  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  17545516 ggtatgaagaaaaatgatgcaagtctctcctctctccctttggtactctctagtagagtaat 17545577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 33352166 - 33352090
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  33352166 tttcccaatctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttac-aatgtttcccaacccaa 33352090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 43036439 - 43036363
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  43036439 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 43036363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 15212802 - 15212726
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  15212802 tttcccaatctcaccaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 15212726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 27811294 - 27811233
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  27811294 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 27811233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 4743360 - 4743431
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||||||||||||||||||||| |||||  ||||||||||||||||| |||||||| ||||||||    
T  4743360 caatctcaccaatgaacaagacactcaatgattttcgctcacccaaggtgtttac-aatgtttcccaacccaa 4743431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 8153780 - 8153700
Alignment:
Q  246 tttctcaatctctccaatgaacaagacac--tcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 324  Q
    |||||||||||| |||||||||| |||||  |||||| |||||| ||| ||||||||| |||||||||||| |||||||||    
T  8153780 tttctcaatctcaccaatgaacatgacacactcaatgattttcactcatccaaggtgtatacaaatgtttcccaacccaaa 8153700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 17982668 - 17982593
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  17982668 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 17982593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 31218272 - 31218197
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  31218272 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 31218197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 41365016 - 41365076
Alignment:
Q  263 tgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 324  Q
    |||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||    
T  41365016 tgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaa 41365076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 44303869 - 44303794
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  44303869 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 44303794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 1292615 - 1292692
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 324  Q
    |||||||||||| |||| ||||||||||||||||  |||||| |||||||||||||| || | |||||| |||||||||    
T  1292615 tttctcaatctcaccaaagaacaagacactcaataattttcactcacccaaggtgttcac-agtgtttcccaacccaaa 1292692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 320
Target Start/End: Original strand, 1746375 - 1746443
Alignment:
Q  250 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    |||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||    
T  1746375 tcaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacc 1746443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 5689272 - 5689226
Alignment:
Q  261 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  5689272 aatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 5689226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 1345523 - 1345584
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| | ||||||||||||| |||||| |||||| |||||||||||||||||||    
T  1345523 tttcccaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttacaa 1345584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 3303822 - 3303898
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||| ||||||| |||||||| |||||| |||| |||||||||||| |||||||| ||||||||    
T  3303822 tttcccaatctcaccaataaacaagatactcaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaa 3303898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 6598988 - 6598912
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | ||||||||||||||| |||| |||||| |||| |||||||||||| |||||||| ||||||||    
T  6598988 tttcccaatctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaa 6598912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 6674441 - 6674365
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | ||||||||||||||| |||| |||||| |||| |||||||||||| |||||||| ||||||||    
T  6674441 tttcccaatctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaa 6674365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 12702791 - 12702866
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||||||||||||| |||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  12702791 tttcccaatctcaccaatgaacaagacacttaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 12702866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 19945513 - 19945573
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  19945513 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 19945573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 34254482 - 34254542
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  34254482 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 34254542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 40321096 - 40321035
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| || ||||||||||||||||||| |||||| |||| ||||||||||||||    
T  40321096 tttcccaatctcacctatgaacaagacactcaatgattttcagtcactcaaggtgtttacaa 40321035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 42498209 - 42498149
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  42498209 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 42498149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 18106235 - 18106306
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| || |||||||||||||||||   |||||| ||||||||||||||||| |||||||| ||||||||    
T  18106235 caatctcaccgatgaacaagacactcaacaattttcactcacccaaggtgtttac-aatgtttcccaacccaa 18106306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 18655416 - 18655349
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    |||||||||||| ||||||||||| |||||| ||| |||||| || |||||||||||||||| ||||||    
T  18655416 tttctcaatctcaccaatgaacaaaacactc-atgattttcactctcccaaggtgtttacaattgtttc 18655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 41366783 - 41366827
Alignment:
Q  263 tgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||||||||| |||||| |||||||||||||||||||    
T  41366783 tgaacaagacactcaatgattttcactcacccaaggtgtttacaa 41366827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 9765761 - 9765691
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccc 321  Q
    |||| ||||||| ||||||||||||||||||||    ||||| ||||||||||||||||| |||||||| ||||||    
T  9765761 tttcccaatctcaccaatgaacaagacactcaa----tttcactcacccaaggtgtttac-aatgtttcccaaccc 9765691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 4283540 - 4283468
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || || ||||||||||||| |||||| ||||    
T  4283540 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcctaaggtgtttacaattgtttcccaac 4283468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 17011600 - 17011543
Alignment:
Q  125 tttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttaccttt 182  Q
    ||||||||||| |||||| ||||||||||||| ||||| | |||||||||||| ||||    
T  17011600 tttctatgtaccaagaacttcaattttaattgggttctcaactatcaattttatcttt 17011543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 17545601 - 17545658
Alignment:
Q  125 tttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttaccttt 182  Q
    ||||||||||| |||||| ||||||||||||| ||||| | |||||||||||| ||||    
T  17545601 tttctatgtaccaagaacttcaattttaattgggttctcaactatcaattttatcttt 17545658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 44353809 - 44353736
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| | ||||||||||| |||||||| |||| | |||||||| |||||||||| |||||| ||||    
T  44353809 tttcccaatctcacaaatgaacaagatactcaatgatttttactcacccaatgtgtttacaattgtttcccaac 44353736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 3772208 - 3772160
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcaccc 294  Q
    |||||||||||| |||||||||||||||||||||  |||||| ||||||    
T  3772208 tttctcaatctcaccaatgaacaagacactcaatcattttcactcaccc 3772160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 34256663 - 34256718
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| |||||||||||||||||||||| ||||||  || |||||||||||||||    
T  34256663 caatctcaccaatgaacaagacactcaatgattttcacaca-ccaaggtgtttacaa 34256718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 40221756 - 40221689
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||| |||| |||||||||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  40221756 caatctcaccaaagaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 40221689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 305
Target Start/End: Original strand, 19491851 - 19491909
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttac 305  Q
    |||| ||||||| |||||||||||||||||||||  |||||| ||||||||| |||||||    
T  19491851 tttcccaatctcaccaatgaacaagacactcaat-attttcactcacccaagatgtttac 19491909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 39721197 - 39721118
Alignment:
Q  129 tatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatc 208  Q
    ||||||| ||||||||||| | ||| | |||||| |||| |||||||||||||| | |||| |||||||| || ||||||    
T  39721197 tatgtactaagaacatcaactctaagtaagttctcatctctcaattttacctttgaattaataatcaatttacgattatc 39721118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 4162501 - 4162455
Alignment:
Q  261 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||||||||||| |||||| || | ||||||||||||||    
T  4162501 aatgaacaagacactcaatgattttcactcgctcaaggtgtttacaa 4162455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 10929808 - 10929754
Alignment:
Q  253 atctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||| |||| ||||||||||||||||| |||||| | | |||||||||||||||    
T  10929808 atctcaccaaagaacaagacactcaatgattttcactaatccaaggtgtttacaa 10929754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 30143356 - 30143282
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||  |||||||||||||||  ||||| |||||| |||||||| |||||||| |||||||| ||||||||    
T  30143356 tttcccaatctggccaatgaacaagaca--caatgattttcactcacccaatgtgtttac-aatgtttcccaacccaa 30143282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 42435148 - 42435209
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    ||||||| |||||||||||||||||| ||| |||||| || ||||| |||||||||| |||||    
T  42435148 caatctcaccaatgaacaagacactc-atgattttcactctcccaaagtgtttacaattgttt 42435209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 323
Target Start/End: Complemental strand, 31513198 - 31513169
Alignment:
Q  294 caaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||||||||||||||||||||||||||    
T  31513198 caaggtgtttacaaatgtttctcaacccaa 31513169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 5e-41; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 123 - 244
Target Start/End: Original strand, 13436794 - 13436914
Alignment:
Q  123 tgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattccatt 222  Q
    |||||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  13436794 tgtttctacgtacctagaacatcaattttaattgagttccaatctatcaattttacctttcatttcacaatcaattcacaattatca-ttttattccatt 13436892  T
Q  223 ataaattttaggaatcattaca 244  Q
    || ||||||||||| |||||||    
T  13436893 atcaattttaggaaccattaca 13436914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 9183183 - 9183258
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca 322  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||    
T  9183183 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccca 9183258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 4045439 - 4045366
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||    
T  4045439 tttcccaatctctccaataaacaagacactcaatgattttcactcaccctaggtgtttacaaatgtttcccaac 4045366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 16452482 - 16452557
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||    
T  16452482 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttctcaacccaa 16452557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 323
Target Start/End: Original strand, 28137568 - 28137636
Alignment:
Q  254 tctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  28137568 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 28137636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 29181642 - 29181786
Alignment:
Q  40 agtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatcttttccttaatgt--ttctatgtacga 137  Q
    |||||||||||||||||||| ||||||| |||| |||||||| |||||||||  |||||||| ||||| ||||||| | ||  | |  || ||||||| |    
T  29181642 agtctctcctctctccctttagtactctttagtagagtaatgacttagtcttgggacttagttttcttgtatctttccttttctcttcttttatgtacta 29181741  T
Q  138 agaacatcaattttaattgagttctaatctatcaattttaccttt 182  Q
    |||||| ||| | |||||| ||||| || ||||||||||| ||||    
T  29181742 agaacaccaactataattgtgttctcatttatcaattttatcttt 29181786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 28983527 - 28983616
Alignment:
Q  26 agaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctt-agtcttatgacttagtcttcttctatcttt 115  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||| | |||||||| |||  |||||| |||| |||||||||||||||||    
T  28983527 agaaaaatgat-gaagtctcccctctctccgtttggtactctctaatagagtaatgacttgggtcttaggactaagtcttcttctatcttt 28983616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 2171683 - 2171758
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  2171683 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 2171758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 3039055 - 3039131
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||||||||||| |||||| |||||| |||| |||||||||||| |||||||| ||||||||    
T  3039055 tttcccaatctcaccaatgaacaagacattcaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaa 3039131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 30834689 - 30834764
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| || |||||||||| |||||||||||||||||    
T  30834689 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccgaggtgtttac-aatgtttctcaacccaa 30834764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 33211337 - 33211413
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||||||| |||||||||| |||||| | ||||||||||||||| |||||||| ||||||||    
T  33211337 tttcccaatctcaccaatgaacaaaacactcaatgattttcagtgacccaaggtgtttac-aatgtttcccaacccaa 33211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 5406351 - 5406424
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccc 321  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||    
T  5406351 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc 5406424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 5410676 - 5410749
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccc 321  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||    
T  5410676 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc 5410749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 21593680 - 21593608
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  21593680 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 21593608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 5413545 - 5413618
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccc 321  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||| |||||||| |||||||| ||||||    
T  5413545 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaatgtgtttac-aatgtttcccaaccc 5413618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 33160505 - 33160581
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatg-tttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||| ||||||||||||| ||||||| ||| ||||||||||||| |||||||| ||||||||    
T  33160505 tttcccaatctcaccaatgaataagacactcaatgatttttcactca-ccaaggtgtttac-aatgtttcccaacccaa 33160581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 5043643 - 5043571
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||| | |||||||||||||||| ||| |||||| || | |||||||||||||| |||||| ||||    
T  5043643 tttctcaatctcacgaatgaacaagacactc-atgattttcactctcacaaggtgtttacaattgtttcccaac 5043571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 603237 - 603304
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||| |||||||||||||||||| ||| |||||| |  |||||||||||||||| |||||| ||||    
T  603237 caatctcaccaatgaacaagacactc-atgattttcactatcccaaggtgtttacaattgtttcccaac 603304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 16567201 - 16567161
Alignment:
Q  267 caagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  16567201 caagacactcaatgattttcactcacccaaggtgtttacaa 16567161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 313
Target Start/End: Original strand, 26830289 - 26830342
Alignment:
Q  259 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    ||||||||||||||||||| || |||||| || |||||||||||||||| |||||    
T  26830289 ccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgttt 26830342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 26954453 - 26954510
Alignment:
Q  262 atgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    ||||||||||||||||||| |||||| || || ||||||||||| |||||||| |||||    
T  26954453 atgaacaagacactcaatgattttcactccccaaaggtgtttac-aatgtttcccaacc 26954510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 165904 - 165949
Alignment:
Q  137 aagaacatcaattttaattgagttctaatctatcaattttaccttt 182  Q
    ||||||| |||||||||||| |||||||||||||| ||||| ||||    
T  165904 aagaacaccaattttaattgtgttctaatctatcacttttatcttt 165949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 2973091 - 2973163
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||| |||||| | || |||||| || |||||||||||||||| |||||| ||||    
T  2973091 tttcccaatctcaccaatgaacacgacactta-tgattttcactctcccaaggtgtttacaattgtttcccaac 2973163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 3808861 - 3808933
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||   || |||||| || |||||||||||||||| |||||| ||||    
T  3808861 tttcccaatctcaccaatgaacaagacact-tgtgattttcactctcccaaggtgtttacaattgtttcccaac 3808933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 14003346 - 14003411
Alignment:
Q  144 tcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatca 209  Q
    |||||||||||  ||||||| ||||||||||||||||||||  | | ||||||||||  |||||||    
T  14003346 tcaattttaatgaagttctagtctatcaattttacctttcacatgataatcaattcatcattatca 14003411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 17763006 - 17762933
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||| |||||||||||||||||||    |||||| || | ||| |||||||||| |||||| ||||    
T  17763006 tttctcaatctcaccaatgaacaagacactcatgaattttcactctctcaaagtgtttacaattgtttcccaac 17762933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 31404842 - 31404886
Alignment:
Q  262 atgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||||    
T  31404842 atgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 31404886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 16569038 - 16568998
Alignment:
Q  267 caagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||||| |||||| | |||||||||||||||||    
T  16569038 caagacactcaatgattttcacttacccaaggtgtttacaa 16568998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 178
Target Start/End: Complemental strand, 29346890 - 29346722
Alignment:
Q  11 gaagcaaaggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta-gtcttatgacttagtcttcttct 109  Q
    |||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||    | |||||| |||| |||||  |||| |||||||||||    
T  29346890 gaagcaaaggcatgaagaaaaatgatgaaagtctctcctttctccctttggtactctctttgagggtaatgacttaagtctttggactaagtcttcttct 29346791  T
Q  110 atcttttccttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttac 178  Q
    |||||||| ||| | ||| ||||||| |||||||||||||||||||| ||||| | |||||||||||||    
T  29346790 atcttttctttagtatttttatgtaccaagaacatcaattttaattgggttctcaactatcaattttac 29346722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 36146560 - 36146637
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  36146560 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaa 36146637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 323
Target Start/End: Original strand, 30843387 - 30843461
Alignment:
Q  249 ctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||||||||||||||||||| |||||||| |||| | ||| | |||||||||||||||||||||||||||||    
T  30843387 ctcaatctctccaatgaacaagatactcaatgattttaactcatctaaggtgtttacaaatgtttctcaacccaa 30843461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 30024884 - 30024945
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  30024884 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 30024945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 31733121 - 31733197
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  31733121 tttctcagtctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 31733197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 47674095 - 47674156
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  47674095 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 47674156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 47676288 - 47676364
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| ||||||||||||||||||| || |||||| ||||||||||||||||| |||||||| ||||||||    
T  47676288 tttctcaatctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 47676364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 29367405 - 29367259
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta-gtcttatgacttagtcttcttctatcttttc 117  Q
    ||||||||||||| |||| ||||||| || |||||| ||||  ||||||||||| |||||||| |||| |||||| ||||||||||||||||||| ||      
T  29367405 ggtatgaagaaaagtgat-gaagtctatcatctctctctttaatactctctagtagagtaatgacttaagtcttaggacttagtcttcttctatccttct 29367307  T
Q  118 cttaatgtttctatgtacgaagaacatcaattttaattgagttctaatc 166  Q
    |||  | ||| ||||||| ||||| |||||||||| || ||||||||||    
T  29367306 ctttctcttt-tatgtaccaagaagatcaattttatttaagttctaatc 29367259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 43864255 - 43864184
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  43864255 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 43864184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 1113673 - 1113597
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| | |||||||||||||||||||| |||||| ||||||||| ||||||| |||||||| ||||||||    
T  1113673 tttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaagttgtttac-aatgtttcccaacccaa 1113597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 4586177 - 4586101
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| ||| || ||||||||||||||||| |||||||| ||||||||    
T  4586177 tttcccaatctcaccaatgaacaagacactcaatgatttacactcacccaaggtgtttac-aatgtttcccaacccaa 4586101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 8153358 - 8153282
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| ||||||||    
T  8153358 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcccaacccaa 8153282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 14069985 - 14070046
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  14069985 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 14070046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 14380013 - 14380074
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  14380013 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 14380074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 31105545 - 31105621
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| |||||    
T  31105545 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttctcaccccaa 31105621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 48491595 - 48491519
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| ||||||||    
T  48491595 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttac-aatgtttcccaacccaa 48491519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 4538697 - 4538753
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  4538697 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 4538753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 29292251 - 29292199
Alignment:
Q  157 agttctaatctatcaattttacctttcatttaacaatcaattcacaattatca 209  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  29292251 agttctaatctatcaattttacctttcacttaataatcaattcacaattatca 29292199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 24526049 - 24526122
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    |||| |||| || |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||    
T  24526049 tttcccaatttcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacc 24526122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 27347833 - 27347760
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| |||||    
T  27347833 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcccaacc 27347760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 2761454 - 2761530
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| |||||||| |||||||| |||||||| ||||||||    
T  2761454 tttcccaatctcaccaatgaacaagacactcgatgattttcactcacccaatgtgtttac-aatgtttcccaacccaa 2761530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 4178790 - 4178715
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  4178790 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 4178715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 5514165 - 5514238
Alignment:
Q  250 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||| ||||||||||| |||||||| |||||| ||| | ||||||||||||| |||||| ||||||||    
T  5514165 tcaatctctcaaatgaacaagaaactcaatgattttcactcatcgaaggtgtttacaagtgtttcccaacccaa 5514238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 12098011 - 12098087
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||  |||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||| ||||||||    
T  12098011 tttcccaatctaaccaatgaacaagacactcaatgattttcactcacccaagatgtttac-aatgtttcccaacccaa 12098087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 24514913 - 24514988
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  24514913 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 24514988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 29991070 - 29990995
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  29991070 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 29990995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 35853930 - 35853855
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  35853930 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 35853855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 38671374 - 38671450
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||  ||||||||||||||||| |||||||| ||||||||    
T  38671374 tttcccaatctcacaaatgaacaagacactcaatgattttcgctcacccaaggtgtttac-aatgtttcccaacccaa 38671450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 41317586 - 41317662
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||||||||| |||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  41317586 tttcccaatctcaccaatgaacaagagactcaatgattttcactcatccaaggtgtttac-aatgtttcccaacccaa 41317662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 48408818 - 48408743
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  48408818 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 48408743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 48489447 - 48489371
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||||||||||| | |||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  48489447 tttcccaatctcaccaatgaacaagacatttaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 48489371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 4253694 - 4253758
Alignment:
Q  259 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||||||||| |||||||| |||||| ||||| |||||||||||||||||||  ||||||||    
T  4253694 ccaatgaacaagaaactcaatgattttcactcacctaaggtgtttacaaatgttttccaacccaa 4253758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 36574672 - 36574744
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||||||||| |||||||||||| ||  |||||| ||||| |||||||||||||||||||  ||||||||    
T  36574672 caatctctccaataaacaagacactcgataattttcactcacctaaggtgtttacaaatgttttccaacccaa 36574744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 41649167 - 41649238
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| | |||||||||||||||||||| |||||| | ||||||||||||||| |||||||| ||||||||    
T  41649167 caatctcacaaatgaacaagacactcaatgattttcacttacccaaggtgtttac-aatgtttcccaacccaa 41649238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 18126655 - 18126585
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca 322  Q
    ||||||| ||||||||||| |||||||||| |||||| ||||||||| ||||||| |||||||| |||||||    
T  18126655 caatctcaccaatgaacaaaacactcaatgattttcactcacccaagttgtttac-aatgtttcccaaccca 18126585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 305
Target Start/End: Complemental strand, 31518811 - 31518752
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttac 305  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||    
T  31518811 tttcccaatctcaccaatgaacaagacactcgatgattttcactcacccaaggtgtttac 31518752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 2361124 - 2361196
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  2361124 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 2361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 23555055 - 23554995
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  23555055 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 23554995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 32471234 - 32471143
Alignment:
Q  21 tatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta-gtcttatgacttagtcttcttctatc 112  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||    ||||||||  |||| |||||   ||||||||||||||||||    
T  32471234 tatgaagaaaattgat-gaagtctctcctctctccctttggtactctccttgcgagtaataacttatgtctttgaacttagtcttcttctatc 32471143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 22328568 - 22328622
Alignment:
Q  265 aacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||||||| ||||||||| | |||||||||||||| |||||| ||||    
T  22328568 aacaagacactcaatgattttcattccctcaaggtgtttacaattgtttcccaac 22328622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 23343985 - 23343923
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    |||||| ||||||||| ||||| |||||| |||||| |||||||||||||||  |||||||||    
T  23343985 aatctcaccaatgaactagacattcaatgattttcactcacccaaggtgttttgaaatgtttc 23343923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 4508858 - 4508930
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| ||||| ||||||||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  4508858 tttcccaatctcaccaatcaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 4508930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 19502193 - 19502118
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||| |||||||||||||||||| || ||| ||| ||||||||||||| |||||||| ||||||||    
T  19502193 tttcgcaatctcaccactgaacaagacactcaatgattctcactca-ccaaggtgtttac-aatgtttcccaacccaa 19502118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 26417332 - 26417271
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| ||||||  | | ||||||||||||||    
T  26417332 tttcccaatctcaccaatgaacaagacactcaatgattttcacccgctcaaggtgtttacaa 26417271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 34310868 - 34310928
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  34310868 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 34310928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 3756762 - 3756682
Alignment:
Q  129 tatgtacgaagaacatcaattttaattgagttctaatctatcaa-ttttacctttcatttaacaatcaattcacaattatc 208  Q
    ||||||| ||||||| ||| | ||||||| |||| ||||||||| |||||||||| |||||| ||||||||  ||||||||    
T  3756762 tatgtactaagaacaccaactctaattgaattctcatctatcaatttttacctttaatttaataatcaatttgcaattatc 3756682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 8359469 - 8359535
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || | |||||||||||||| |||||    
T  8359469 tttcccaatctccccaatgaacaagacactc-atgattttcactctctcaaggtgtttacaattgttt 8359535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 23565222 - 23565280
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    |||||| |||||||||||||||||  |||||   || |||||||||||||||||||||||||    
T  23565222 aatctcaccaatgaacaagacacttcatgtt---cactcacccaaggtgtttacaaatgttt 23565280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 307
Target Start/End: Original strand, 25767124 - 25767170
Alignment:
Q  260 caatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  25767124 caatgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 25767170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 3259011 - 3258938
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||||    |||||| |  |||||||||||||||| |||||| ||||    
T  3259011 tttcccaatctcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaac 3258938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 6431987 - 6431915
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||  |||||||||||||||||| ||| |||||| || ||||| |||||||||| |||||| ||||    
T  6431987 tttcccaatctaaccaatgaacaagacactc-atgattttcactctcccaatgtgtttacaattgtttcccaac 6431915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 6360077 - 6360136
Alignment:
Q  259 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||| |||||| || ||||||||| ||||||||||||| || |||||| ||||    
T  6360077 ccaatgaacaagtcactca-tgattttcattctcccaaggtgtttaaaattgtttcccaac 6360136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 22269989 - 22269921
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    |||| ||||||| |||||||||||||||||||    |||||| || ||||||||||||| || ||||||    
T  22269989 tttcccaatctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttagaattgtttc 22269921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 25615858 - 25615818
Alignment:
Q  267 caagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||||| |||||  |||||||||||||||||||    
T  25615858 caagacactcaatgattttctctcacccaaggtgtttacaa 25615818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 29293486 - 29293427
Alignment:
Q  26 agaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta 86  Q
    ||||||||||| |||||||||||||||||  || ||||||||||| | |||||||| ||||    
T  29293486 agaaaaatgat-gaagtctctcctctctcttttgggtactctctaatagagtaatgcctta 29293427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 39731371 - 39731317
Alignment:
Q  267 caagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  39731371 caagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 39731317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 29196539 - 29196616
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  29196539 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaa 29196616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 44700630 - 44700707
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  44700630 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaa 44700707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 5236608 - 5236684
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  5236608 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 5236684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 40734514 - 40734438
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  40734514 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 40734438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 9666624 - 9666692
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||| | |||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  9666624 caatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 9666692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 44331555 - 44331485
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  44331555 aatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 44331485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 31314461 - 31314385
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| || ||||||||||||||||||| |||||| |||||||| |||||||| |||||||| ||||||||    
T  31314461 tttctcaatctcacctatgaacaagacactcaatgattttcactcacccaaagtgtttac-aatgtttcccaacccaa 31314385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 39153529 - 39153589
Alignment:
Q  262 atgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  39153529 atgaacaagacactcaatgattttcattcacccaaggtgtttac-aatgtttcccaacccaa 39153589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 9581284 - 9581223
Alignment:
Q  261 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  9581284 aatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 9581223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 46860490 - 46860416
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatg-tttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||| ||||||||||||||||||| ||  |||||| || |||||||||||||||| |||||||||||    
T  46860490 tttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttctcaac 46860416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 5258297 - 5258372
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  5258297 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 5258372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 19684041 - 19684117
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | ||||||||||||| |||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  19684041 tttcccaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 19684117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 29682375 - 29682299
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | ||| |||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  29682375 tttcccaatctcacaaataaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 29682299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 45095180 - 45095105
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  45095180 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 45095105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 5434035 - 5434102
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||| ||||    
T  5434035 caatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaattgtttcccaac 5434102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 29810878 - 29810807
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 324  Q
    |||||| |||||||| |||||| |||||| |||||| ||||||||||||||||| |||||||| |||||||||    
T  29810878 aatctcaccaatgaataagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaa 29810807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 53921660 - 53921716
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  53921660 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtttttacaa 53921716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 4569968 - 4569901
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    |||| ||||||| |||| |||||| |||||||||| |||||| ||||||||||||||||||| |||||    
T  4569968 tttcccaatctcaccaaagaacaaaacactcaatgattttcactcacccaaggtgtttacaattgttt 4569901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 16499046 - 16498973
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |  |||||||||||||| ||||||||||||||    
T  16499046 tttcccaatctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttac-aatgtttctcaacc 16498973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 760863 - 760787
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||| ||||||||||||  |||||||| ||||||||    
T  760863 tttcccaatctcacaaatgaacaagacactcaatgattttcactcatccaaggtgttta-taatgtttcccaacccaa 760787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 2075209 - 2075285
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| |||| || |||||||||||||||||||||| |||||| |||  ||||||||||| ||||||||| ||||||||    
T  2075209 tttcccaatatcaccaatgaacaagacactcaatgattttcactca-gcaaggtgtttataaatgtttcccaacccaa 2075285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 5260476 - 5260551
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||| |||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  5260476 tttcccaatctcaccaatgaccaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 5260551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 22835154 - 22835215
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |||||||||||| ||||||    
T  22835154 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgattacaa 22835215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 23392061 - 23392137
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||| ||| |||||||| |||||||| |||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  23392061 tttcccaaactcaccaatgaaaaagacactaaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 23392137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 32756569 - 32756502
Alignment:
Q  39 aagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttc 108  Q
    ||||||||||||||||||||||||||||| | || ||||||||||| ||||||| ||||| |||||||||    
T  32756569 aagtctctcctctctccctttggtactct-tggtagagtaatggctaagtctta-gacttggtcttcttc 32756502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 32891119 - 32891058
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| || | ||||||||||||||||| |||| | |||||||||||||||||||    
T  32891119 tttctcaatctcaccgaagaacaagacactcaatgatttttactcacccaaggtgtttacaa 32891058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 40735399 - 40735338
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| |||||||||||||||||||||| |||||| |   |||||||||||||||    
T  40735399 tttctcaatctcaccaatgaacaagacactcaatgattttcacttttccaaggtgtttacaa 40735338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 54593720 - 54593648
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  54593720 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 54593648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 51398825 - 51398769
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||  ||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  51398825 caatctcatcaatgaacaagacactcaatgattttcactcatccaaggtgtttacaa 51398769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 23410496 - 23410542
Alignment:
Q  261 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||    
T  23410496 aatgaacaagacactcaatgattttcactcactcaaggtgtttacaa 23410542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 46506041 - 46506095
Alignment:
Q  37 tgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtctt 91  Q
    ||||||||||||||||| |||| ||||||| ||||| |||||||| |||||||||    
T  46506041 tgaagtctctcctctcttccttgggtactccctagtagagtaatgacttagtctt 46506095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 46506083 - 46506171
Alignment:
Q  92 atgacttagtcttcttctatcttttccttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttaccttt 182  Q
    |||||||||||||||| ||||||| ||||  | |||| ||||||  ||||||| | |||||||||| ||||||||||||||||||| ||||    
T  46506083 atgacttagtcttcttgtatcttt-cctttctctttc-atgtacttagaacataagttttaattgatttctaatctatcaattttatcttt 46506171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 6095751 - 6095823
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||| |||||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  6095751 tttcccaatctcaccaatgaataagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 6095823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 7762281 - 7762221
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| |||||||| ||||||||||||| |||||| ||| |||||||||| ||||    
T  7762281 tttctcaatctcaccaatgaataagacactcaatgattttcactca-ccaaggtgttcacaa 7762221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 7764475 - 7764423
Alignment:
Q  254 tctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  7764475 tctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 7764423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 23198091 - 23198165
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||| ||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  23198091 tttcccaatctcaccaa-gaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 23198165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 23200290 - 23200364
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||| ||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  23200290 tttcccaatctcaccaa-gaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 23200364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 31340353 - 31340425
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| ||||||||||| ||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  31340353 tttcccaatctcaccaatgaacaaaacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 31340425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 37408474 - 37408399
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||  |||||| ||| | ||||||||||| |||||||| ||||||||    
T  37408474 tttcccaatctcaccaatgaacaagacactcaataattttcactca-ctaaggtgtttac-aatgtttcccaacccaa 37408399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 43401954 - 43402014
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  43401954 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 43402014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 43403897 - 43403969
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || ||||| |||||||||| |||||| ||||    
T  43403897 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaagtgtttacaattgtttcccaac 43403969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 8166612 - 8166683
Alignment:
Q  250 tcaatctctccaatgaacaagacac--tcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||||| | |||||||||||||  |||||| ||||||  ||||||| |||||||||||||||| |||||    
T  8166612 tcaatctcttccatgaacaagacacactcaatgattttcacccacccaatgtgtttacaaatgtttttcaac 8166683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 9636284 - 9636339
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| ||||||| |||||||||||||| |||||| ||| |||||||||||||||    
T  9636284 caatctcaccaatgaccaagacactcaatgattttcactca-ccaaggtgtttacaa 9636339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 305
Target Start/End: Original strand, 26386633 - 26386692
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttac 305  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |||||||| || |||||    
T  26386633 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaagtatttac 26386692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 46173369 - 46173315
Alignment:
Q  259 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    ||||||||||||||||||| || |||||| || |||||||||||||||| ||||||    
T  46173369 ccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttc 46173315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 5373247 - 5373163
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcaccc-------aaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| |||||||| ||||||||||||||||||||| |||||  ||||||       ||||||||||| |||||||| ||||||||    
T  5373247 tttcccaatctcttcaatgaacaagacactcaatgattttccctcacccacccaataaggtgtttaccaatgtttcccaacccaa 5373163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 35138857 - 35138915
Alignment:
Q  246 tttctcaatctctc-caatgaacaagacactcaatgtttttcattcacccaaggtgttt 303  Q
    |||||||||||||  | ||||||||||||||||||| |||||| || ||||||||||||    
T  35138857 tttctcaatctctttccatgaacaagacactcaatgattttcactctcccaaggtgttt 35138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 30236141 - 30236069
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| |||||||  |||||||||||||||||| || |||||| |  |||||||||||||||| |||||| ||||    
T  30236141 tttcccaatctcatcaatgaacaagacactca-tgattttcactatcccaaggtgtttacaattgtttcccaac 30236069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 41819675 - 41819736
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||    |||||| || ||||||||||||||||    
T  41819675 tttcccaatctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaa 41819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 49199622 - 49199694
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||| ||||||||||||| ||| |||||| || ||||| |||||||||| |||||| ||||    
T  49199622 tttcccaatctcaccaacgaacaagacactc-atgattttcactctcccaaagtgtttacaattgtttcccaac 49199694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 531231 - 531270
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctcccttt 59  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  531231 ggtatgaagaaaattgat-gaagtctctcctctctcccttt 531270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 564186 - 564225
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctcccttt 59  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  564186 ggtatgaagaaaattgat-gaagtctctcctctctcccttt 564225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 1313994 - 1314034
Alignment:
Q  283 tttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||| |||||||||||||||||||||||||| ||| ||||    
T  1313994 tttcactcacccaaggtgtttacaaatgtttcccaatccaa 1314034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 9e-24; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 23407669 - 23407744
Alignment:
Q  168 atcaattttacctttcatttaacaatcaattcacaattatcatttttattccattataaattttaggaatcattaca 244  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  23407669 atcaattttacctttcatttcacaatcaattcacaattatca-ttttattccattatcaattttaggaaccattaca 23407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 52467521 - 52467583
Alignment:
Q  261 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  52467521 aatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaa 52467583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 5429695 - 5429619
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  5429695 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 5429619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 26175788 - 26175864
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  26175788 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 26175864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 29254510 - 29254434
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| |||||||| ||||||||    
T  29254510 tttcccaatctcaccaatgaacaagacactcaatgattttcattcacccaatgtgtttac-aatgtttcccaacccaa 29254434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 37229874 - 37229951
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||||||||||||||| || |||||| |||||||||||||||||||||||||  ||||||||    
T  37229874 tttcccaatctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttacaaatgttttccaacccaa 37229951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 48143058 - 48142982
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  48143058 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 48142982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 48893794 - 48893855
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  48893794 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 48893855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 52095514 - 52095590
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  52095514 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 52095590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 5871831 - 5871760
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  5871831 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 5871760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 24969123 - 24969051
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||| ||||||||| ||||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  24969123 caatctcaccaaagaacaagactctcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaa 24969051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 6542333 - 6542409
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||  |||||| ||||||||||||||||| |||||||| ||||||||    
T  6542333 tttcccaatctccccaatgaacaagacactcaataattttcactcacccaaggtgtttac-aatgtttcccaacccaa 6542409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 13009583 - 13009659
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  13009583 tttcacaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 13009659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 31474166 - 31474105
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  31474166 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttacaa 31474105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 36994540 - 36994479
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  36994540 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 36994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 51337080 - 51337019
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  51337080 tttctcaatctcaccaatgaacaggacactcaatgattttcactcacccaaggtgtttacaa 51337019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 52082809 - 52082885
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  52082809 tttcccaatctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 52082885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 54200058 - 54200134
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| ||||||||    
T  54200058 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcccaacccaa 54200134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 5207999 - 5208071
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||| |||||||||||||| |||| |||| |||||| |||||||||||||||||||||||||| ||| ||||    
T  5207999 caatcactccaatgaacaagtcactaaatgattttcactcacccaaggtgtttacaaatgtttcccaatccaa 5208071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 47038566 - 47038637
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||  |||||||| ||||||||    
T  47038566 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttta-taatgtttcccaacccaa 47038637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 55085521 - 55085584
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    ||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||    
T  55085521 caatctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttacaattgtttc 55085584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 12745594 - 12745648
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttaca 306  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  12745594 aatctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttaca 12745648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 12739702 - 12739778
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| ||| || ||||| ||||||||||| |||||||| ||||||||    
T  12739702 tttcccaatctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttac-aatgtttcccaacccaa 12739778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 12747908 - 12747984
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| ||| || ||||| ||||||||||| |||||||| ||||||||    
T  12747908 tttcccaatctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttac-aatgtttcccaacccaa 12747984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 29056374 - 29056301
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||||| ||||||||| |||||||||| |||| | ||||||||||||||| |||||||||| ||||    
T  29056374 tttcccaatctctctaatgaacaaaacactcaatgatttttactcacccaaggtgtttccaaatgtttcccaac 29056301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 34570566 - 34570642
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||| ||||| | |||||||| ||||||||    
T  34570566 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaagatgttttc-aatgtttcccaacccaa 34570642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 36463541 - 36463602
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  36463541 tttcccaatctcaccaatgaacaagacactcaatgaatttcactcacccaaggtgtttacaa 36463602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 40632461 - 40632389
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| ||||||||||||||||||| || |||||| || |||||||||||||||| |||||||||||    
T  40632461 tttcccaatctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttctcaac 40632389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 56178789 - 56178864
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  56178789 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 56178864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 4587974 - 4587899
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca 322  Q
    |||| |||| || |||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||| |||||||    
T  4587974 tttcccaatttcaccaatgaacatgacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccca 4587899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 4578364 - 4578541
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctt-agtcttatgacttagtcttcttctatcttttc 117  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||||||||||||| ||| ||| |||| ||||||| ||  ||||||||||  ||||||||    
T  4578364 ggtatgaaaaaaaatgat-gaagtctctcctctccctctttggtactctctagtagagcaatagcttaagtctta-gagatagtcttctttaatcttttc 4578461  T
Q  118 c-ttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaatt 198  Q
    | ||  |  || ||| ||| | ||||| ||| |||||||| ||||| ||| ||||||||||  ||| |||||||||||||||    
T  4578462 catttctcatt-tatttactacgaacaccaactttaattgtgttctcatcaatcaatttta-ttttgatttaacaatcaatt 4578541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 5349905 - 5349845
Alignment:
Q  263 tgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 324  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||||||||| |||||||||    
T  5349905 tgaacaagacactcaaagattttcaatcatccaaggtgtttacaaatgtttc-caacccaaa 5349845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 23406633 - 23406698
Alignment:
Q  21 tatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta 86  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||||    |||||||||||||    
T  23406633 tatgaagaaaaatgatgaaagtctctcctctctctctttggtactctctttgagagtaatggctta 23406698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 23407625 - 23407678
Alignment:
Q  99 agtcttcttctatcttttccttaatgtttctatgtacgaagaacatcaatttta 152  Q
    ||||||||||||||||||| |||||  |||||||||| ||||||||||||||||    
T  23407625 agtcttcttctatcttttctttaatagttctatgtaccaagaacatcaatttta 23407678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 53345233 - 53345156
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||||||||||| || |||||||||||||||| |||||| ||||  || ||||| |||||| ||||||| |||||    
T  53345233 tttctcaatctctccgataaacaagacactcaatgattttcactcacttaaagtgttaacaaatttttctcaccccaa 53345156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 54883036 - 54882964
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  54883036 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 54882964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 3913464 - 3913408
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtt 302  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||    
T  3913464 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtt 3913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 37740635 - 37740566
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||| ||||||||||||||||||| || |||||| ||| ||||||||||||| |||||||| ||||||||    
T  37740635 aatctcaccaatgaacaagacactcagtgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 37740566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 21688264 - 21688192
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||| || ||||||||||||||| ||| |||||| || ||||||||||||| || |||||| ||||    
T  21688264 tttctcaatctcaccgatgaacaagacactc-atgattttcactcccccaaggtgtttagaattgtttcccaac 21688192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 29999958 - 30000018
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||| | |||||| ||| |||||||||||||||    
T  29999958 tttcccaatctcaccaatgaacaagacactcaacgattttcactca-ccaaggtgtttacaa 30000018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 45687335 - 45687411
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| ||||||||||||||| ||||    ||||| ||||||||||||||||| |||||||| ||||||||    
T  45687335 tttcccaatctcaccaatgaacaagacaatcaaaaaatttcactcacccaaggtgtttac-aatgtttcccaacccaa 45687411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 46703516 - 46703443
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||||    |||||| || |||||||||||||||| |||||| ||||    
T  46703516 tttcccaatctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaattgtttcccaac 46703443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 5370244 - 5370299
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| |||||||||||||||||||||| |||||| ||| |||| ||||||||||    
T  5370244 caatctcaccaatgaacaagacactcaatgattttcactca-ccaaagtgtttacaa 5370299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 12119549 - 12119481
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||| || |||||||||||||||| || |||||| || |||||||| ||||||| |||||| ||||    
T  12119549 caatctcacctatgaacaagacactcattgattttcactctcccaaggtatttacaattgtttcccaac 12119481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 50673998 - 50674064
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    |||||||||||| | |||||||| ||||||| ||| |||||| || |||||||||||||||| |||||    
T  50673998 tttctcaatctcacaaatgaacacgacactc-atgattttcactctcccaaggtgtttacaattgttt 50674064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 2209729 - 2209669
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| |||||||  ||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  2209729 tttcccaatctcaacaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 2209669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 6655968 - 6655900
Alignment:
Q  250 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||| | | ||||||||||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  6655968 tcaatctcacaagtgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 6655900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 35662453 - 35662384
Alignment:
Q  250 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||| |||||||||||||||||||   |||||||  | | |||||||||||||| |||||| ||||    
T  35662453 tcaatctcaccaatgaacaagacactcatgatttttcacactctcaaggtgtttacaattgtttcccaac 35662384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 49272623 - 49272660
Alignment:
Q  23 tgaagaaaaatgattgaagtctctcctctctccctttg 60  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  49272623 tgaagaaaaatgatgaaagtctctcctctctccctttg 49272660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 13992459 - 13992513
Alignment:
Q  267 caagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  13992459 caagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 13992513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 33089893 - 33089837
Alignment:
Q  248 tctcaatctct-ccaatgaacaagacactcaatgtttttcattcacccaaggtgttt 303  Q
    ||||||||||| || ||||||||||||||||||| |||||| ||  |||||||||||    
T  33089893 tctcaatctcttcccatgaacaagacactcaatgattttcactcttccaaggtgttt 33089837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 48142551 - 48142603
Alignment:
Q  267 caagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||||| |||||| |||||| | ||||||| ||||||||| ||||    
T  48142551 caagacactcaatgattttcactcacccgaagtgtttaaaaatgtttcccaac 48142603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 4552789 - 4552865
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||||    
T  4552789 tttctcaatctcaccaatgaacaagacactcaatgattttccctcacccaaggtgtttac-aatgtttctcaacccaa 4552865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 44650315 - 44650382
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 313  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||    
T  44650315 tttctcaatctctccaatgaacaagacactcaataattttcactcacccaaagtgtttacaaatgttt 44650382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 197060 - 197136
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  197060 tttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 197136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 10925235 - 10925163
Alignment:
Q  250 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  10925235 tcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 10925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 44455176 - 44455100
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  44455176 tttcccaatctcaccaatgaacaagacactcaatggttttcactcacccaaggtgtttac-aatgtttcccaacccaa 44455100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 50167327 - 50167403
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  50167327 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 50167403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 28265706 - 28265779
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||    
T  28265706 tttcccaatctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacc 28265779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 1833538 - 1833477
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  1833538 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 1833477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 3847273 - 3847349
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  3847273 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 3847349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 13138130 - 13138187
Alignment:
Q  250 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  13138130 tcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 13138187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 37503706 - 37503767
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  37503706 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 37503767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 49918366 - 49918309
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgttt 303  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||    
T  49918366 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttt 49918309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 928142 - 928206
Alignment:
Q  259 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| |||||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||    
T  928142 ccaaagaacaagacactcattgattttcactcacccaaggtgtttacaaatgtttcccaacccaa 928206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 31659249 - 31659193
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  31659249 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 31659193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 50169367 - 50169438
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||| ||||||||    
T  50169367 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtatttac-aatgtttcccaacccaa 50169438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 834319 - 834395
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| ||||||  |||||||||||||||| |||||||| ||||||||    
T  834319 tttcccaatctcacaaatgaacaagacactcaatgattttcacgcacccaaggtgtttac-aatgtttcccaacccaa 834395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 8550939 - 8551015
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |||||||| |||||||| ||||||||| |||||||    
T  8550939 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcttaacccaa 8551015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 20762687 - 20762612
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||||||||| ||||||||||||| |||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  20762687 tttctcaatctcaccaatgaacaagatactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 20762612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 28223573 - 28223649
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||| | | |||||||| ||||||||    
T  28223573 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtcttc-aatgtttcccaacccaa 28223649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 37282847 - 37282920
Alignment:
Q  250 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||||||||||||||||||||||||||| |||||| |||  ||||||||||| ||| ||||  ||||||||    
T  37282847 tcaatctctccaatgaacaagacactcaatggttttcactcatacaaggtgtttaaaaaagttttccaacccaa 37282920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 45644507 - 45644568
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| ||||||||||||||||| |||| |||||| ||||||||| |||||||||    
T  45644507 tttctcaatctcaccaatgaacaagacacttaatgattttcactcacccaagatgtttacaa 45644568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 46064934 - 46064873
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |||||||||||||||||||    
T  46064934 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 46064873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 23555422 - 23555493
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||| ||| ||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||    
T  23555422 caatctcaccaaagaataagacactcaataattttcattcacccaaggtgtttac-aatgtttcccaacccaa 23555493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 44646936 - 44646999
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaat 309  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||| |||| || |||||||||    
T  44646936 tttctcaatctctccaatgaacaagacactcaataattttcactcatccaaagtatttacaaat 44646999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 13659488 - 13659561
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |  |||||||||||||| ||||||||||||||    
T  13659488 tttcccaatctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttac-aatgtttctcaacc 13659561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 29274575 - 29274719
Alignment:
Q  19 ggtatgaagaaaaatgattgaagtctctcctctctc-cctttggtactctctagtcgagtaatggctt-agtcttatgacttagtcttcttctatctttt 116  Q
    |||||||| || |||||| ||||||||||||||| | |||||| ||||||||||| ||||||||| || |||| |  ||||||| |||||||||||||||    
T  29274575 ggtatgaaaaataatgat-gaagtctctcctctccctcctttgatactctctagtagagtaatggtttaagtccttggacttagccttcttctatctttt 29274673  T
Q  117 ccttaatgtttctatgtacgaagaacatcaattttaattgagttcta 163  Q
     ||| || ||| ||||||| || || | || ||||||||| ||||||    
T  29274674 tctttatcttt-tatgtactaaaaataccagttttaattgggttcta 29274719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 193627 - 193555
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||| |||||||||||||||||| ||| ||||||  | |||||||||||||||| |||||| ||||    
T  193627 tttctcaatctcaccaatgaacaagacactc-atgattttcaccctcccaaggtgtttacaattgtttcccaac 193555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 3156881 - 3156821
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||| ||| |||||||||||    
T  3156881 tttctcaatctcaccaatgaacaagacactcaatgattttcactca-ccagggtgtttacaa 3156821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 11348714 - 11348642
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  11348714 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 11348642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 19754510 - 19754438
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||||||| |||||||||||||||||| ||| |||||| || | |||||||||||| |||||||| ||||    
T  19754510 tttctcaatctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacgaatgtttcccaac 19754438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 29136263 - 29136191
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  29136263 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcacaac 29136191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 37033225 - 37033297
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  37033225 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 37033297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 37879063 - 37879135
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  37879063 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 37879135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 13547241 - 13547308
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| ||||||    
T  13547241 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttc 13547308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 13549152 - 13549219
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| ||||||    
T  13549152 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttc 13549219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 15820310 - 15820262
Alignment:
Q  259 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  15820310 ccaaagaacaagacactcaatgattttcactcacccaaggtgtttacaa 15820262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 16455633 - 16455585
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggt 299  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  16455633 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggt 16455585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 3189340 - 3189271
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||| ||||||||||||||||||| || |||||| ||| ||||||||||||| |||||||| ||||||||    
T  3189340 aatctcaccaatgaacaagacactcagtgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 3189271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 3198157 - 3198088
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||| ||||||||||||||||||| || |||||| ||| ||||||||||||| |||||||| ||||||||    
T  3198157 aatctcaccaatgaacaagacactcagtgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 3198088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 3206996 - 3206927
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||||| ||||||||||||||||||| || |||||| ||| ||||||||||||| |||||||| ||||||||    
T  3206996 aatctcaccaatgaacaagacactcagtgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 3206927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 28220384 - 28220435
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgttt 303  Q
    |||||| |||||||| ||||||||||||| |||||| |||||||||||||||    
T  28220384 aatctcaccaatgaataagacactcaatgattttcactcacccaaggtgttt 28220435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 37560027 - 37560082
Alignment:
Q  252 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||||| |||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  37560027 aatctcaccaatgaacaagacactcaatgattttcactcacctaatgtgtttacaa 37560082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 37168313 - 37168241
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || | |||||||||||||| |||||| ||||    
T  37168313 tttcccaatctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacaattgtttcccaac 37168241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 42298127 - 42298199
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||| | || |||||||||||||||| |||||| ||||    
T  42298127 tttcccaatctcaccaatgaacaagacactc-atgatttttactctcccaaggtgtttacaattgtttcacaac 42298199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 47115187 - 47115115
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||| ||||||||| |||||| ||||    
T  47115187 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaagatgtttacaattgtttcccaac 47115115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 40122355 - 40122411
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    ||||||| | ||||||||||||| |||||| |||| | |||||||||||||||||||    
T  40122355 caatctcacaaatgaacaagacattcaatgatttttactcacccaaggtgtttacaa 40122411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 305
Target Start/End: Complemental strand, 41360930 - 41360872
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttac 305  Q
    |||| ||||||| |||||||||||||||||||||  |||||| ||||||||| |||||||    
T  41360930 tttcccaatctcaccaatgaacaagacactcaat-attttcactcacccaagatgtttac 41360872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 6808446 - 6808389
Alignment:
Q  262 atgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    ||||||||||||||||||  |||||| || ||||| |||||| | |||||||||||||    
T  6808446 atgaacaagacactcaataattttcactctcccaaagtgtttcccaatgtttctcaac 6808389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 31925867 - 31925919
Alignment:
Q  254 tctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| |||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  31925867 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 31925919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 34603588 - 34603519
Alignment:
Q  250 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 319  Q
    |||||||| |||||||||||||||||||    |||||| |  |||||||||||||||| |||||| ||||    
T  34603588 tcaatctcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaac 34603519  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 19752698 - 19752643
Alignment:
Q  249 ctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttac 305  Q
    ||||||||| |||||||||||||||||| ||| |||||| || | ||||||||||||    
T  19752698 ctcaatctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttac 19752643  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 323
Target Start/End: Original strand, 30476618 - 30476676
Alignment:
Q  263 tgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||||| |||||||| ||||||  |||||||||||||||| |||||||| ||||||||    
T  30476618 tgaacaaga-actcaatgattttcacccacccaaggtgtttac-aatgtttcccaacccaa 30476676  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 114618 - 114543
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  114618 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 114543  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 149249 - 149322
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 320  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |  |||||||||||||| ||||||||||||||    
T  149249 tttcccaatctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttac-aatgtttctcaacc 149322  T

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Target: scaffold0286 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 11573 - 11513
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  11573 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 11513  T

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Target: scaffold0466 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 7338 - 7276
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| ||||||    
T  7338 caatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttc 7276  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 16548 - 16415
Alignment:
Q  37 tgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatcttttccttaatgtttctatgtacg 136  Q
    ||||||| || ||||||||||||| || |||||||| || ||||| |||||||||| ||||||    |||||||||||||||||  |  ||  ||||||     
T  16548 tgaagtcactactctctccctttgatattctctagtagactaatgacttagtcttaggactta---atcttctatcttttcctttcttctttcatgtact 16452  T
Q  137 aagaacatcaattttaattgagttctaatctatcaat 173  Q
    ||||||| ||| | ||||||  |||| ||||||||||    
T  16451 aagaacaccaactctaattggattctcatctatcaat 16415  T

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Target: scaffold1519 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 931 - 857
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    |||| ||||||| |||| ||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  931 tttcccaatctcaccaa-gaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 857  T

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Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 20567 - 20628
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 307  Q
    |||| ||||||| |||||||| || | |||||||| |||||| |||||||||||||||||||    
T  20567 tttcccaatctcaccaatgaataataaactcaatgattttcactcacccaaggtgtttacaa 20628  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 19117 - 19167
Alignment:
Q  272 cactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||||| |||||| ||||||||| |||||||||||||||| ||||||||    
T  19117 cactcaatgattttcactcacccaag-tgtttacaaatgtttcccaacccaa 19167  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 434543 - 434501
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacc 293  Q
    ||||||| |||||||||||||||||||||| |||||| |||||    
T  434543 caatctcaccaatgaacaagacactcaatgattttcactcacc 434501  T

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Target: scaffold0491 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 11320 - 11389
Alignment:
Q  251 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 323  Q
    ||||||| |||| ||||||||||||||||| ||| || ||| ||||||||||||| |||||||| ||||||||    
T  11320 caatctcaccaa-gaacaagacactcaatgatttacactca-ccaaggtgtttac-aatgtttcccaacccaa 11389  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 80435 - 80502
Alignment:
Q  246 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 314  Q
    |||| |||||||  ||||||||||||||||| ||| |||||| || ||||||||||| |||| ||||||    
T  80435 tttcccaatctcagcaatgaacaagacactc-atgattttcactctcccaaggtgttcacaattgtttc 80502  T

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