View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11704_high_7 (Length: 470)

Name: NF11704_high_7
Description: NF11704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11704_high_7
NF11704_high_7
[»] chr2 (20 HSPs)
chr2 (1-464)||(5699612-5700079)
chr2 (40-154)||(12324430-12324544)
chr2 (65-150)||(8485881-8485966)
chr2 (37-154)||(31380499-31380618)
chr2 (297-383)||(28770878-28770964)
chr2 (328-385)||(2869829-2869886)
chr2 (328-385)||(3277908-3277965)
chr2 (328-374)||(8390284-8390330)
chr2 (328-385)||(23078606-23078663)
chr2 (328-399)||(14699129-14699198)
chr2 (328-372)||(17865121-17865165)
chr2 (328-374)||(8039976-8040022)
chr2 (100-154)||(11183882-11183936)
chr2 (328-374)||(20522136-20522182)
chr2 (328-374)||(31055958-31056004)
chr2 (328-374)||(33528756-33528802)
chr2 (340-374)||(34388775-34388809)
chr2 (328-385)||(10445579-10445636)
chr2 (340-381)||(12632466-12632507)
chr2 (330-374)||(33118052-33118096)
[»] chr5 (10 HSPs)
chr5 (37-154)||(34272244-34272361)
chr5 (37-154)||(15027014-15027130)
chr5 (341-411)||(30899742-30899810)
chr5 (328-374)||(3880216-3880262)
chr5 (328-374)||(12084311-12084357)
chr5 (328-410)||(2630110-2630193)
chr5 (340-374)||(14520145-14520179)
chr5 (328-374)||(19588662-19588708)
chr5 (221-304)||(30793237-30793324)
chr5 (340-385)||(34842509-34842554)
[»] chr6 (11 HSPs)
chr6 (40-156)||(6919321-6919437)
chr6 (36-147)||(29181491-29181602)
chr6 (328-385)||(22963605-22963662)
chr6 (328-385)||(23824731-23824788)
chr6 (328-374)||(5017603-5017649)
chr6 (57-130)||(8171134-8171206)
chr6 (73-154)||(10086065-10086146)
chr6 (328-372)||(18232763-18232807)
chr6 (86-142)||(30062991-30063047)
chr6 (328-374)||(4629869-4629915)
chr6 (328-374)||(10077300-10077346)
[»] chr7 (11 HSPs)
chr7 (37-153)||(32471262-32471378)
chr7 (57-154)||(39773170-39773267)
chr7 (37-154)||(29367426-29367543)
chr7 (328-374)||(55864-55910)
chr7 (328-374)||(4796802-4796848)
chr7 (328-374)||(20284005-20284051)
chr7 (328-374)||(29159719-29159765)
chr7 (328-374)||(49091578-49091624)
chr7 (328-385)||(2647831-2647888)
chr7 (328-385)||(46516445-46516502)
chr7 (340-372)||(9190155-9190187)
[»] chr8 (10 HSPs)
chr8 (37-155)||(32848074-32848192)
chr8 (40-154)||(9617997-9618111)
chr8 (58-154)||(17011727-17011821)
chr8 (58-154)||(17545380-17545474)
chr8 (38-152)||(39721287-39721403)
chr8 (331-385)||(5990699-5990753)
chr8 (342-385)||(7493210-7493253)
chr8 (328-374)||(26403365-26403411)
chr8 (328-372)||(9765955-9765999)
chr8 (114-154)||(11364774-11364814)
[»] chr4 (14 HSPs)
chr4 (36-159)||(45610535-45610659)
chr4 (328-382)||(37781771-37781825)
chr4 (37-116)||(5842125-5842204)
chr4 (41-127)||(5198896-5198982)
chr4 (328-399)||(5269326-5269394)
chr4 (328-378)||(10047291-10047341)
chr4 (330-372)||(16630817-16630859)
chr4 (328-374)||(38152573-38152619)
chr4 (86-154)||(23406518-23406586)
chr4 (41-127)||(4848723-4848810)
chr4 (328-374)||(25862157-25862203)
chr4 (328-381)||(42599709-42599762)
chr4 (73-125)||(49272541-49272593)
chr4 (330-374)||(54867100-54867144)
[»] chr1 (14 HSPs)
chr1 (69-154)||(29274471-29274555)
chr1 (328-385)||(47704071-47704128)
chr1 (96-151)||(32897267-32897322)
chr1 (328-385)||(29651716-29651773)
chr1 (342-378)||(48382631-48382667)
chr1 (91-154)||(12900713-12900776)
chr1 (54-152)||(13399978-13400079)
chr1 (328-374)||(775588-775634)
chr1 (328-374)||(13598314-13598360)
chr1 (328-374)||(27104507-27104553)
chr1 (36-118)||(49138095-49138177)
chr1 (86-115)||(4625300-4625329)
chr1 (328-385)||(40816867-40816924)
chr1 (340-384)||(9023979-9024023)
[»] chr3 (10 HSPs)
chr3 (37-154)||(46505886-46506003)
chr3 (89-154)||(14594845-14594910)
chr3 (328-374)||(8370612-8370658)
chr3 (328-374)||(27026861-27026907)
chr3 (331-374)||(35925398-35925441)
chr3 (331-374)||(48438130-48438173)
chr3 (328-374)||(26298904-26298950)
chr3 (328-370)||(27038210-27038252)
chr3 (328-374)||(40592908-40592954)
chr3 (340-374)||(47924009-47924043)
[»] scaffold0012 (1 HSPs)
scaffold0012 (89-154)||(41910-41975)
[»] scaffold0148 (1 HSPs)
scaffold0148 (328-385)||(10634-10691)
[»] scaffold0076 (1 HSPs)
scaffold0076 (328-385)||(16124-16181)
[»] scaffold0006 (2 HSPs)
scaffold0006 (328-374)||(2408-2454)
scaffold0006 (328-374)||(5599-5645)


Alignment Details
Target: chr2 (Bit Score: 370; Significance: 0; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 464
Target Start/End: Complemental strand, 5700079 - 5699612
Alignment:
Q  1 caatcatttttcttcatacctt----tgattctcattggcctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttac 96  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||    
T  5700079 caatcatttttcttcataccttctgttgattctcattggcctatttatgcacagcccaaacttccttgattttaggatcactagtcacgtgttcatttac 5699980  T
Q  97 ctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataacaaaagatggtagaaattagggtttgttgcttgttgaaattagt 196  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |    
T  5699979 cttaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataactgaaaatggtagaaattagggtttgttgtttgttgaaattaat 5699880  T
Q  197 ttcttgtaatctttttgtatctcgttgatagtgaagtggagagatctctccccagagtatgttattgttggaccaaatcaagaaaatatttcttgtgtgt 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5699879 ttcttgtaatctttttgtatctcgttgatagtgaagtggagagatctctccccagagtatgttattgttggaccgaatcaagaaaatatttcttgtgtgt 5699780  T
Q  297 ttgtttcttttctcttctatcttatggttgctgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttgacttgttgttg 396  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5699779 ttgtttcttttctcttttatcttatcgttgctgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttgacttgttgttg 5699680  T
Q  397 cttaaggttactttgatannnnnnngacaaaggttactttgatattgattactacttttctctgctcc 464  Q
    ||||||||||||||||||       ||||||||||||||| ||||||||||||| |||||| ||||||    
T  5699679 cttaaggttactttgatatttttttgacaaaggttactttaatattgattactatttttctttgctcc 5699612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 12324544 - 12324430
Alignment:
Q  40 tttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgcta 139  Q
    |||||||||||| |||  || |||||||||| ||||||  | || || ||||||||||||||| |||||||||| | ||| |||||||||| ||||||||    
T  12324544 tttatgcacaactcaaggttacttgattttaagatcacacgccacgtctccatttacctcaactaattatgttaggtcaaatgtatttcctcatatgcta 12324445  T
Q  140 ttttgaatcataaca 154  Q
    |||||||||||||||    
T  12324444 ttttgaatcataaca 12324430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 8485881 - 8485966
Alignment:
Q  65 attttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcat 150  Q
    |||||| || ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| | |||||||| ||||||||    
T  8485881 attttaagaccactagtcatgtgtccatttacctcaatcaattatgttatgccaaatgtatatcctcaaatgctattctgaatcat 8485966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 31380618 - 31380499
Alignment:
Q  37 ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaacc--aattatgttatgccaagtgtatttcctaata 134  Q
    ||||||||||||||| |||  ||| ||||||||||||| | ||| || |||||||||||  ||||||  ||||||||||||| ||||||||||||  |||    
T  31380618 ctatttatgcacaactcaaggttcattgattttaggatgattagccacgtgtccatttatatcaaccccaattatgttatgctaagtgtatttccacata 31380519  T
Q  135 tgctattttgaatcataaca 154  Q
    ||||| ||||||||||||||    
T  31380518 tgctactttgaatcataaca 31380499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 383
Target Start/End: Original strand, 28770878 - 28770964
Alignment:
Q  297 ttgtttcttttctcttctatcttatggttgctgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgt 383  Q
    ||||||| |||||||||| | ||||  ||  |||||||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  28770878 ttgtttcctttctcttctttattatattttttgctttgattatgcttgtggtgttgcttcacacttagatctaggtctatttgttgt 28770964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 2869829 - 2869886
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    ||||||||||| |||| |||||||||| ||||||||||| ||||||||||||||||||    
T  2869829 tgctttgaatatgcttatggtgttgctctacacttagatttaggtctatttgttgttg 2869886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 3277965 - 3277908
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    ||||||||||| | |||| ||||||||| |||||||||||||| ||||||||||||||    
T  3277965 tgctttgaatatgtttgtagtgttgcttcacacttagatctagatctatttgttgttg 3277908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 8390284 - 8390330
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||    
T  8390284 tgctttgattatgcttgtggtgttgctctacacttagatctaggtct 8390330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 23078606 - 23078663
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| || ||||||||||||||| ||||||||||||||||| | ||| ||||||    
T  23078606 tgctttgattatgcttgtggtgttgctctacacttagatctaggtatgttttttgttg 23078663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 399
Target Start/End: Original strand, 14699129 - 14699198
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttgacttgttgttgctt 399  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||  || ||||||  ||||||||||||    
T  14699129 tgctttgattatgcttgtggtgttgctctacacttagatttaggtctgctttttgttg--ttgttgttgctt 14699198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 17865165 - 17865121
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggt 372  Q
    |||||||| || ||||||||||||||| |||||||||||||||||    
T  17865165 tgctttgattatgcttgtggtgttgctctacacttagatctaggt 17865121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 8040022 - 8039976
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  8040022 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 8039976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 11183936 - 11183882
Alignment:
Q  100 aaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    |||||||||  || |||||||||||||| || ||||||||||| |||||||||||    
T  11183936 aaccaattacattttgccaagtgtattttctcatatgctatttagaatcataaca 11183882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 20522182 - 20522136
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| |||||||||||||| ||||    
T  20522182 tgctttgattatgcttgtggtgttgctctacacttagatctatgtct 20522136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 31056004 - 31055958
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  31056004 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 31055958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 33528756 - 33528802
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| |||| ||||||||||||||    
T  33528756 tgctttgattatgcttgtggtgttgctctacatttagatctaggtct 33528802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 374
Target Start/End: Complemental strand, 34388809 - 34388775
Alignment:
Q  340 gcttgtggtgttgctttacacttagatctaggtct 374  Q
    ||||||||||||||| |||||||||||||||||||    
T  34388809 gcttgtggtgttgctctacacttagatctaggtct 34388775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 10445579 - 10445636
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| || ||||||||| ||||| ||||||||||| ||||||| ||| ||||||    
T  10445579 tgctttgattatgcttgtggttttgctctacacttagatttaggtctgttttttgttg 10445636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 381
Target Start/End: Complemental strand, 12632507 - 12632466
Alignment:
Q  340 gcttgtggtgttgctttacacttagatctaggtctatttgtt 381  Q
    |||||||||||||||| ||||||| |||||||||| ||||||    
T  12632507 gcttgtggtgttgcttgacacttatatctaggtctgtttgtt 12632466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 33118096 - 33118052
Alignment:
Q  330 ctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||| || ||||||||||||||| ||||||||||| |||||||    
T  33118096 ctttgattatgcttgtggtgttgctctacacttagatttaggtct 33118052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 34272361 - 34272244
Alignment:
Q  37 ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg 136  Q
    |||||||||||||| | || | |||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||| ||||||| || |||||    
T  34272361 ctatttatgcacaatctaagcatccttgattttaggatcactagtcacatgtccatttacctaaaccaattatgttatgccaaatgtattttctcatatg 34272262  T
Q  137 ctattttgaatcataaca 154  Q
    ||||||||||||||||||    
T  34272261 ctattttgaatcataaca 34272244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 15027014 - 15027130
Alignment:
Q  37 ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg 136  Q
    |||| ||||||||||  ||  ||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||| ||||||| || || ||    
T  15027014 ctatatatgcacaacttaaggttccttgattttaggatcactagccgagtgtc-atttacctcaaccaattatgttatgccaaatgtattttctcatgtg 15027112  T
Q  137 ctattttgaatcataaca 154  Q
     ||||||| |||||||||    
T  15027113 ttattttggatcataaca 15027130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 411
Target Start/End: Complemental strand, 30899810 - 30899742
Alignment:
Q  341 cttgtggtgttgctttacacttagatctaggtctatttgttgttgacttgttgttgcttaaggttactttg 411  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||  |||||||||||| ||| |||||||    
T  30899810 cttgtggtgttgcttaacactttgatctaggtctatgtgttgttg--ttgttgttgcttgaggctactttg 30899742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 3880262 - 3880216
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||    
T  3880262 tgctttgattatgcttgtggtgttgctttacacttagatttaggtct 3880216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 12084311 - 12084357
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||    
T  12084311 tgctttgattatgcttgtggtgttgctctacacttagatctaggtct 12084357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 2630193 - 2630110
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg-acttgttgttgcttaaggttacttt 410  Q
    |||||| |||| ||||||||||||||| | ||||||||| |||| ||||||||| |||   |||||||||||| ||| ||||||    
T  2630193 tgctttaaatatgcttgtggtgttgctctgcacttagatttaggcctatttgtttttgttgttgttgttgcttgaggctacttt 2630110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 374
Target Start/End: Complemental strand, 14520179 - 14520145
Alignment:
Q  340 gcttgtggtgttgctttacacttagatctaggtct 374  Q
    ||||||||||||||| |||||||||||||||||||    
T  14520179 gcttgtggtgttgctctacacttagatctaggtct 14520145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 19588708 - 19588662
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  19588708 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 19588662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 30793237 - 30793324
Alignment:
Q  221 ttgatagtgaagtggagagatctct---ccccagagtatgttattgttggaccaaatcaagaaaatatttctt-gtgtgtttgtttct 304  Q
    |||||||||||||||||||||||||   ||| |||||| || ||||||||||| ||  | | ||| ||||||| ||||||||||||||    
T  30793237 ttgatagtgaagtggagagatctctctcccctagagtaagtcattgttggaccgaacaaggtaaacatttcttggtgtgtttgtttct 30793324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 34842554 - 34842509
Alignment:
Q  340 gcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||||||||||| |||||||||||||||| | ||| ||||||    
T  34842554 gcttgtggtgttgcttcacacttagatctaggtttgtttattgttg 34842509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 9e-31; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 40 - 156
Target Start/End: Complemental strand, 6919437 - 6919321
Alignment:
Q  40 tttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgcta 139  Q
    ||||||||||| |||||||| ||| ||||||| |||||||| ||  ||||||||| |||||||||||||||||||||||||||||||| |  ||||||||    
T  6919437 tttatgcacaatccaaactttcttaattttagtatcactagccacatgtccatttgcctcaaccaattatgttatgccaagtgtattttcccatatgcta 6919338  T
Q  140 ttttgaatcataacaaa 156  Q
    | |||||||||||||||    
T  6919337 tattgaatcataacaaa 6919321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 29181602 - 29181491
Alignment:
Q  36 cctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatat 135  Q
    |||||||||||| | |||||||||| ||||||||||||||||||| ||  ||| ||||| ||||||||| | |||  |||||||||||||||| | ||||    
T  29181602 cctatttatgcatatcccaaacttctttgattttaggatcactagccacttgttcatttgcctcaaccagtaatgacatgccaagtgtatttcttcatat 29181503  T
Q  136 gctattttgaat 147  Q
    ||||||||||||    
T  29181502 gctattttgaat 29181491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 22963662 - 22963605
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  22963662 tgctttgattatgcttgtggtgttgctctacacttagatctaggtctgttttttgttg 22963605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 23824731 - 23824788
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  23824731 tgctttgattatgcttgtggtgttgctctacacttagatctaggtctgttttttgttg 23824788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 5017603 - 5017649
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||    
T  5017603 tgctttgattatgcttgtggtgttgctctacacttagatctaggtct 5017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 8171206 - 8171134
Alignment:
Q  57 cttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcct 130  Q
    ||||||||||||||| |||||||| ||  |||| |||| | ||||||||||| |||||| ||||||||||||||    
T  8171206 cttccttgattttag-atcactagccacatgtcaatttgcttcaaccaattaagttatgacaagtgtatttcct 8171134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 10086146 - 10086065
Alignment:
Q  73 atcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    |||||||| ||  |||||||||| ||||||||||||| || | | | |||||||| || || ||||||||||||||||||||    
T  10086146 atcactagccacatgtccatttatctcaaccaattatatttttcaatgtgtattttctcatgtgctattttgaatcataaca 10086065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 18232807 - 18232763
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggt 372  Q
    |||||||| || ||||||||||||||| |||||||||||||||||    
T  18232807 tgctttgattatgcttgtggtgttgctctacacttagatctaggt 18232763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 30063047 - 30062991
Alignment:
Q  86 tgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattt 142  Q
    |||||||||||||||||||||||  || |||||||||||||| || || ||||||||    
T  30063047 tgtccatttacctcaaccaattacattttgccaagtgtattttctcatgtgctattt 30062991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 4629915 - 4629869
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  4629915 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 4629869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 10077300 - 10077346
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  10077300 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 10077346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 32471262 - 32471378
Alignment:
Q  37 ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg 136  Q
    |||||||||||||| |||| |||||||||||||||||||||||   |  ||||||||| ||||||||||| || |||||||||| ||||||||| ||||     
T  32471262 ctatttatgcacaatccaagcttccttgattttaggatcactaactacatgtccatttgcctcaaccaataatattatgccaagcgtatttcctcatatt 32471361  T
Q  137 ctattttgaatcataac 153  Q
    |||||||||||||||||    
T  32471362 ctattttgaatcataac 32471378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 39773267 - 39773170
Alignment:
Q  57 cttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    ||||||| |||||||||||||||| ||  |||||||||  |||||||||||||||||||||| ||||| ||||| |||||  ||||||||||||||||    
T  39773267 cttccttaattttaggatcactagccacatgtccatttttctcaaccaattatgttatgccatgtgtaattccttatatgtcattttgaatcataaca 39773170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 29367426 - 29367543
Alignment:
Q  37 ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg 136  Q
    ||||||||| | |||||||| ||| || |||||||||| ||||| |  ||  |||||||| |||||||||||| |||| | ||||||||||||| ||||     
T  29367426 ctatttatgtataacccaaagttctttaattttaggattactagccgcgtacccatttacttcaaccaattatattatactaagtgtatttcctcatata 29367525  T
Q  137 ctattttgaatcataaca 154  Q
     |||||||||||||||||    
T  29367526 ttattttgaatcataaca 29367543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 55910 - 55864
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| || ||||||||||||||||    
T  55910 tgctttgattatgcttgtggtgttgctctatacttagatctaggtct 55864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 4796802 - 4796848
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  4796802 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 4796848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 20284051 - 20284005
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  20284051 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 20284005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 29159765 - 29159719
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  29159765 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 29159719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 49091624 - 49091578
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| |||||||| ||||||||||    
T  49091624 tgctttgattatgcttgtggtgttgctctacacttaaatctaggtct 49091578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 2647831 - 2647888
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| || ||||||||||||||| || |||||||| ||||||| ||| ||||||    
T  2647831 tgctttgattatgcttgtggtgttgctctaaacttagatttaggtctgttttttgttg 2647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 46516445 - 46516502
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| || |||| |||||||||||||||||||||| || |||| ||| ||||||    
T  46516445 tgctttgattatgcttttggtgttgctttacacttagatttaagtctgttttttgttg 46516502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 9190155 - 9190187
Alignment:
Q  340 gcttgtggtgttgctttacacttagatctaggt 372  Q
    ||||||||||||||| |||||||||||||||||    
T  9190155 gcttgtggtgttgctctacacttagatctaggt 9190187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 8e-25; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 32848074 - 32848192
Alignment:
Q  37 ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatg 136  Q
    |||||||||||||| |||||||||||||||||||||||||  || ||  ||| ||||||||||||||||| |||||||||||| |||| ||  | |||||    
T  32848074 ctatttatgcacaatccaaacttccttgattttaggatcatgagccacatgttcatttacctcaaccaatgatgttatgccaaatgtaattttttatatg 32848173  T
Q  137 ctattttgaatcataacaa 155  Q
    | | |||||||||||||||    
T  32848174 caaatttgaatcataacaa 32848192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 9617997 - 9618111
Alignment:
Q  40 tttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgcta 139  Q
    ||||||||||| ||||||||| |||||| |||||||||||| ||  | ||| ||| ||||||||||||||| |||| ||| |||||||| | ||||||||    
T  9617997 tttatgcacaatccaaacttcattgattctaggatcactagccacatctccctttgcctcaaccaattatgatatgtcaaatgtatttcttcatatgcta 9618096  T
Q  140 ttttgaatcataaca 154  Q
    ||||  |||||||||    
T  9618097 ttttagatcataaca 9618111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 17011727 - 17011821
Alignment:
Q  58 ttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    ||||||||||||||||||||||| || ||| |   ||||||||||||||||||||||||||||||||| | || || |||||||||| |||||||||    
T  17011727 ttccttgattttaggatcactagccaagtgaca--ttacctcaaccaattatgttatgccaagtgtatcttctcatttgctattttggatcataaca 17011821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 17545474 - 17545380
Alignment:
Q  58 ttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    ||||||||||||||||||||||| || ||| |   ||||||||||||||||||||||||||||||||| | || || |||||||||| |||||||||    
T  17545474 ttccttgattttaggatcactagccaagtgaca--ttacctcaaccaattatgttatgccaagtgtatcttctcatttgctattttggatcataaca 17545380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 39721287 - 39721403
Alignment:
Q  38 tatttatgcacaacccaaacttccttgattttaggatcact--agtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatat 135  Q
    |||||||||||||| |||  || |||||||||| ||||| |  || ||||| |||||||||||| ||||||||| ||||| |||||||||||  | || |    
T  39721287 tatttatgcacaactcaagttttcttgattttaagatcattgtagccatgtatccatttacctcgaccaattatattatgtcaagtgtattttttcatgt 39721386  T
Q  136 gctattttgaatcataa 152  Q
    |||||||||||||||||    
T  39721387 gctattttgaatcataa 39721403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 5990699 - 5990753
Alignment:
Q  331 tttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| ||||||||| ||| | ||||||||||| ||||||||||||||||||    
T  5990699 tttgaatatgcttgtggttttgttctacacttagatttaggtctatttgttgttg 5990753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 7493210 - 7493253
Alignment:
Q  342 ttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  7493210 ttgtggtgttgctctacacttagatttagatctatttgttgttg 7493253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 26403365 - 26403411
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  26403365 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 26403411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 9765955 - 9765999
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggt 372  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||    
T  9765955 tgctttgattatgcttgtggtgttgctctacacttagatttaggt 9765999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 11364774 - 11364814
Alignment:
Q  114 tgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    |||||||||||||| || ||||||| |||||||||||||||    
T  11364774 tgccaagtgtattttctcatatgctgttttgaatcataaca 11364814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 45610659 - 45610535
Alignment:
Q  36 cctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatat 135  Q
    ||||||||||||||||| || |||||||||| |||| ||||||||| |  |||| |||| ||||||| |||||| |||||||||||||| || ||  |||    
T  45610659 cctatttatgcacaaccaaaccttccttgatcttagaatcactagttacatgtctatttgcctcaacaaattatattatgccaagtgtaattacttctat 45610560  T
Q  136 g-ctattttgaatcataacaaaaga 159  Q
    | | | |||||||||||||||||||    
T  45610559 gtccaatttgaatcataacaaaaga 45610535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 37781825 - 37781771
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttg 382  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  37781825 tgctttgaatatgcttgtggtgttgcttcacacttagatctaggtctatttgttg 37781771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 5842125 - 5842204
Alignment:
Q  37 ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgc 116  Q
    ||||||||| |||| | |||||||||| ||||||| |||| |||||||||| ||||||||||||| ||| ||||| ||||    
T  5842125 ctatttatgtacaatctaaacttccttcattttagtatcaatagtcatgtgcccatttacctcaatcaaatatgtgatgc 5842204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 5198896 - 5198982
Alignment:
Q  41 ttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtattt 127  Q
    ||||||| || |||| ||||| |||||||   |||||||| ||  ||||||||| |||||||||||||||||||||| |||||||||    
T  5198896 ttatgcataatccaagcttccatgattttttaatcactagccacatgtccatttgcctcaaccaattatgttatgccgagtgtattt 5198982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 399
Target Start/End: Original strand, 5269326 - 5269394
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttgacttgttgttgctt 399  Q
    |||||||| || ||||||||||||||| ||||||||||||||||| ||||| ||||||  ||||||||||||    
T  5269326 tgctttgattatgcttgtggtgttgctctacacttagatctaggtatattt-ttgttg--ttgttgttgctt 5269394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 10047341 - 10047291
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctattt 378  Q
    |||||||| || ||||||||||||||| |||||||||||||| ||||||||    
T  10047341 tgctttgattatgcttgtggtgttgctctacacttagatctatgtctattt 10047291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 16630817 - 16630859
Alignment:
Q  330 ctttgaataagcttgtggtgttgctttacacttagatctaggt 372  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  16630817 ctttgattatgcttgtggtgttgctttacacttagatctaggt 16630859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 38152573 - 38152619
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||    
T  38152573 tgctttgattatgcttgtggtgttgctatacacttagatctaggtct 38152619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 23406586 - 23406518
Alignment:
Q  86 tgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    |||| ||||| ||||||||||||  || | |||||||||||| || || ||||||||||||||||||||    
T  23406586 tgtctatttagctcaaccaattacatttttccaagtgtattttctcatgtgctattttgaatcataaca 23406518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 4848810 - 4848723
Alignment:
Q  41 ttatgcacaacccaaacttccttgattttagga-tcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtattt 127  Q
    ||||||| || |||| |||||||||||||   | ||||||| ||  ||||||||| | |||||||||||||||||||||| |||||||    
T  4848810 ttatgcataatccaagcttccttgatttttttaatcactagccacatgtccatttgcgtcaaccaattatgttatgccaaatgtattt 4848723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 25862157 - 25862203
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  25862157 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 25862203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 381
Target Start/End: Original strand, 42599709 - 42599762
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgtt 381  Q
    |||||||| || ||||||||||||||| |||| |||||||||||| | ||||||    
T  42599709 tgctttgattatgcttgtggtgttgctctacatttagatctaggtttgtttgtt 42599762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 49272593 - 49272541
Alignment:
Q  73 atcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtat 125  Q
    ||||||| |||  |||||||||||||||||||||||  || ||||||||||||    
T  49272593 atcactaatcacatgtccatttacctcaaccaattacattttgccaagtgtat 49272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 54867144 - 54867100
Alignment:
Q  330 ctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||| || ||||||||||||||| |||||||||||||| ||||    
T  54867144 ctttgattatgcttgtggtgttgctctacacttagatctatgtct 54867100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 154
Target Start/End: Complemental strand, 29274555 - 29274471
Alignment:
Q  69 taggatcactagtcatgtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    |||||||||| | ||  |||||||||  ||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  29274555 taggatcactggccacatgtccatttgtctcaaccaaatatgttatgccaagtgtatttccttata-gatattttgaatcataaca 29274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 47704071 - 47704128
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| ||| |||||||||||||| ||||||||||| ||||||||||| ||||||    
T  47704071 tgctttgattaaacttgtggtgttgctctacacttagatttaggtctattttttgttg 47704128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 32897322 - 32897267
Alignment:
Q  96 cctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcata 151  Q
    |||||||||||| ||||||||||||||||||| || ||||  ||||||||||||||    
T  32897322 cctcaaccaattctgttatgccaagtgtattttctcatatagtattttgaatcata 32897267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 29651773 - 29651716
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| || ||||||||||||||| |||||||||||||| |||| ||| ||||||    
T  29651773 tgctttgattatgcttgtggtgttgctctacacttagatctaagtctgttttttgttg 29651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 378
Target Start/End: Original strand, 48382631 - 48382667
Alignment:
Q  342 ttgtggtgttgctttacacttagatctaggtctattt 378  Q
    |||||||||||||| ||||||||||||||||||||||    
T  48382631 ttgtggtgttgcttcacacttagatctaggtctattt 48382667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 12900776 - 12900713
Alignment:
Q  91 atttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    ||||| ||||||||||||  || |||||||||||||| || || |||||| |||||||||||||    
T  12900776 atttagctcaaccaattacattttgccaagtgtattttctcatgtgctatcttgaatcataaca 12900713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 13400079 - 13399978
Alignment:
Q  54 aaacttccttgattttaggatcactagtcat---gtgtccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcat 150  Q
    ||||||||||||||||| | | ||||| |||   || || ||||| ||||| |||||||||||| |||| |||| || || | |||||||||||||||||    
T  13400079 aaacttccttgattttatgtttactagccatatagtatcgatttatctcaaacaattatgttataccaaatgtactttcttaaatgctattttgaatcat 13399980  T
Q  151 aa 152  Q
    ||    
T  13399979 aa 13399978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 775634 - 775588
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  775634 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 775588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 13598360 - 13598314
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || |||||||||||| || |||||||||||||||||||    
T  13598360 tgctttgattatgcttgtggtgtttctctacacttagatctaggtct 13598314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 27104507 - 27104553
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  27104507 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 27104553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 49138177 - 49138095
Alignment:
Q  36 cctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacctcaaccaattatgttatgcca 118  Q
    |||||||||| |||| |||| ||||||| |||||||||| | |||  |  |||| |||| |||| ||||||||||||||||||    
T  49138177 cctatttatgtacaatccaagcttcctttattttaggatgaatagctacatgtcaatttgcctcgaccaattatgttatgcca 49138095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 115
Target Start/End: Complemental strand, 4625329 - 4625300
Alignment:
Q  86 tgtccatttacctcaaccaattatgttatg 115  Q
    ||||||||||||||||||||||||||||||    
T  4625329 tgtccatttacctcaaccaattatgttatg 4625300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 40816867 - 40816924
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| || ||| ||||||||||| ||||||||||| ||||||| ||| ||||||    
T  40816867 tgctttgattatgctcgtggtgttgctctacacttagatttaggtctgttttttgttg 40816924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 9023979 - 9024023
Alignment:
Q  340 gcttgtggtgttgctttacacttagatctaggtctatttgttgtt 384  Q
    ||||||||||||||| ||||||||||| ||||| | |||||||||    
T  9023979 gcttgtggtgttgctatacacttagatttaggtatgtttgttgtt 9024023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 46506003 - 46505886
Alignment:
Q  37 ctatttatgcacaacccaaacttccttgattttaggatcactagtcatgtgtccatttacct-caaccaattatgttatgccaagtgtatttcctaatat 135  Q
    ||||||||||||| || ||  |||||| ||||||||||||| || |||||||||||| |  | |||| ||| || ||||||||||||| |||||| | ||    
T  46506003 ctatttatgcacatcc-aaggttcctttattttaggatcaccagacatgtgtccattcaatttcaactaataatattatgccaagtgtgtttcctcaaat 46505905  T
Q  136 gctattttgaatcataaca 154  Q
    ||||| |||||||||||||    
T  46505904 gctatattgaatcataaca 46505886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 14594845 - 14594910
Alignment:
Q  89 ccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    |||||||| |||||||||| |||||| |||||| |||||  | |||||||||||||||||||||||    
T  14594845 ccatttacttcaaccaattctgttatcccaagtctattttttcatatgctattttgaatcataaca 14594910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 8370612 - 8370658
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||    
T  8370612 tgctttgattatgcttgtggtgttgctctacacttagatctaggtct 8370658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 27026907 - 27026861
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||    
T  27026907 tgctttgattatgcttgtggtgttgctctacacttagatctaggtct 27026861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 35925441 - 35925398
Alignment:
Q  331 tttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    ||||| || ||||||||||||||| |||||||||||||||||||    
T  35925441 tttgattatgcttgtggtgttgctctacacttagatctaggtct 35925398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 48438173 - 48438130
Alignment:
Q  331 tttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    ||||| || ||||||||||||||| |||||||||||||||||||    
T  48438173 tttgattatgcttgtggtgttgctctacacttagatctaggtct 48438130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 26298950 - 26298904
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  26298950 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 26298904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 27038252 - 27038210
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctag 370  Q
    |||||||| || ||||||||||||||| |||||||||||||||    
T  27038252 tgctttgattatgcttgtggtgttgctctacacttagatctag 27038210  T

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Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 40592908 - 40592954
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  40592908 tgctttgattatgcttgtggtgttgctctacacttagatttaggtct 40592954  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 374
Target Start/End: Original strand, 47924009 - 47924043
Alignment:
Q  340 gcttgtggtgttgctttacacttagatctaggtct 374  Q
    ||||||||||||||| |||||||||||||||||||    
T  47924009 gcttgtggtgttgctctacacttagatctaggtct 47924043  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 41975 - 41910
Alignment:
Q  89 ccatttacctcaaccaattatgttatgccaagtgtatttcctaatatgctattttgaatcataaca 154  Q
    |||||||| |||||||||| |||||| |||||| |||||  | |||||||||||||||||||||||    
T  41975 ccatttacttcaaccaattctgttatcccaagtctattttttcatatgctattttgaatcataaca 41910  T

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Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 10691 - 10634
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    |||||||| || ||||||||||||||| ||||||||||| ||||||| ||| ||||||    
T  10691 tgctttgattatgcttgtggtgttgctctacacttagatttaggtctgttttttgttg 10634  T

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Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 16124 - 16181
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtctatttgttgttg 385  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||  |||||||||||    
T  16124 tgctttgaatatgtttgtggtgttgtttcacacttagatctaggtaaatttgttgttg 16181  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 2454 - 2408
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || ||||||||||||| | |||||||||||||||||||    
T  2454 tgctttgattatgcttgtggtgttgttctacacttagatctaggtct 2408  T

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Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 5645 - 5599
Alignment:
Q  328 tgctttgaataagcttgtggtgttgctttacacttagatctaggtct 374  Q
    |||||||| || |||||||||||| || |||||||||||||||||||    
T  5645 tgctttgattatgcttgtggtgtttctctacacttagatctaggtct 5599  T

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