View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11704_low_11 (Length: 352)
Name: NF11704_low_11
Description: NF11704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11704_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 17 - 333
Target Start/End: Original strand, 36659906 - 36660222
Alignment:
| Q |
17 |
gaagggacaaattgatctcccgtaaaaaggacaaactaatctctttatgtttagactaatgtgttgttctcattttctctaaactataaaattgcattgt |
116 |
Q |
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| T |
36659906 |
gaagggacaaattgatctcccgtaaaaaggacaaactaatccctttatgtttagaccaatgtgttgttcccattttctctaaactataaaattgcattgt |
36660005 |
T |
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| Q |
117 |
cgttccattcaaattaagtatgttcttttgcttcaagtccatttcattactgaattatacgttaaacaaggaataattggtgagaaataagaaccaaaac |
216 |
Q |
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| T |
36660006 |
cgttctattcaaattaagtatattcttttgcttcaagtccatttcattactgaattatatgttaaataaggaataattggtgagaaataagaaccaaaac |
36660105 |
T |
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| Q |
217 |
caaaatataatttagagaattttccaatataaatcacacctaatataatgggtttagcggtgagcatctactaatgagagaataaatatatccacgtctc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36660106 |
caaaatataatttagagaattttccaatataaatcacacctaatataatgagtttatcggtgagcatctactaatgagagaataaatatatccacgtctc |
36660205 |
T |
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| Q |
317 |
cacgggatgactcaatt |
333 |
Q |
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|||||||||| |||||| |
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| T |
36660206 |
cacgggatgagtcaatt |
36660222 |
T |
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