View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11704_low_18 (Length: 255)

Name: NF11704_low_18
Description: NF11704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11704_low_18
NF11704_low_18
[»] chr5 (37 HSPs)
chr5 (97-245)||(33044962-33045110)
chr5 (1-96)||(39054673-39054768)
chr5 (9-96)||(7552857-7552944)
chr5 (1-95)||(2972410-2972504)
chr5 (1-96)||(5168269-5168364)
chr5 (1-96)||(39591766-39591861)
chr5 (1-96)||(39592158-39592253)
chr5 (1-96)||(7287079-7287174)
chr5 (1-104)||(13168608-13168711)
chr5 (1-96)||(33037606-33037701)
chr5 (1-90)||(27487973-27488062)
chr5 (7-95)||(13309975-13310063)
chr5 (1-96)||(1671628-1671723)
chr5 (2-93)||(8686978-8687069)
chr5 (13-96)||(17626084-17626167)
chr5 (1-96)||(26791134-26791229)
chr5 (1-96)||(28306022-28306117)
chr5 (1-96)||(36739034-36739129)
chr5 (1-90)||(7076464-7076553)
chr5 (1-69)||(14051232-14051300)
chr5 (1-96)||(35634725-35634821)
chr5 (1-96)||(1274444-1274538)
chr5 (1-96)||(41321341-41321436)
chr5 (2-96)||(1764311-1764405)
chr5 (2-96)||(18258683-18258777)
chr5 (1-53)||(8097338-8097390)
chr5 (1-65)||(33958180-33958244)
chr5 (14-65)||(2429106-2429157)
chr5 (1-96)||(14923159-14923254)
chr5 (1-96)||(15479555-15479650)
chr5 (1-96)||(18660845-18660939)
chr5 (1-96)||(21156074-21156169)
chr5 (1-96)||(22972203-22972298)
chr5 (2-44)||(21943637-21943679)
chr5 (2-59)||(1079879-1079936)
chr5 (32-101)||(42478075-42478144)
chr5 (12-76)||(24468201-24468265)
[»] chr8 (35 HSPs)
chr8 (1-96)||(37133752-37133847)
chr8 (1-95)||(36816507-36816601)
chr8 (1-96)||(29025346-29025441)
chr8 (1-93)||(27854661-27854753)
chr8 (1-96)||(11253432-11253527)
chr8 (1-96)||(36660340-36660435)
chr8 (2-96)||(4054176-4054270)
chr8 (15-96)||(24479323-24479404)
chr8 (1-96)||(10902791-10902880)
chr8 (1-96)||(27325844-27325939)
chr8 (1-96)||(37449315-37449410)
chr8 (1-59)||(10731632-10731690)
chr8 (1-93)||(10839375-10839467)
chr8 (1-96)||(22719526-22719621)
chr8 (1-96)||(23754596-23754691)
chr8 (17-96)||(32133425-32133504)
chr8 (1-92)||(34639619-34639710)
chr8 (1-96)||(39856124-39856219)
chr8 (1-95)||(32501087-32501181)
chr8 (1-65)||(7271936-7272000)
chr8 (1-45)||(45405618-45405662)
chr8 (1-92)||(12898823-12898914)
chr8 (1-96)||(13106566-13106661)
chr8 (1-96)||(34186693-34186788)
chr8 (1-96)||(42768290-42768385)
chr8 (14-92)||(36251425-36251503)
chr8 (1-63)||(43397867-43397929)
chr8 (2-96)||(44976894-44976990)
chr8 (2-96)||(7598796-7598889)
chr8 (8-49)||(2883281-2883322)
chr8 (4-45)||(6440171-6440212)
chr8 (1-45)||(3413133-3413177)
chr8 (2-94)||(12734903-12734995)
chr8 (1-45)||(33100411-33100455)
chr8 (1-45)||(41639738-41639782)
[»] chr6 (29 HSPs)
chr6 (1-96)||(277077-277172)
chr6 (1-96)||(4820453-4820548)
chr6 (1-96)||(22079453-22079548)
chr6 (1-96)||(11612274-11612369)
chr6 (1-96)||(26595435-26595530)
chr6 (1-87)||(3853206-3853292)
chr6 (2-96)||(33603170-33603264)
chr6 (1-96)||(32316818-32316913)
chr6 (1-95)||(2241917-2242010)
chr6 (7-95)||(3552046-3552134)
chr6 (2-86)||(11014890-11014974)
chr6 (13-96)||(16199548-16199631)
chr6 (2-96)||(14818019-14818113)
chr6 (2-95)||(30423443-30423536)
chr6 (1-65)||(34047473-34047537)
chr6 (1-96)||(552879-552974)
chr6 (1-96)||(1156806-1156901)
chr6 (1-96)||(5694041-5694136)
chr6 (2-93)||(18737460-18737551)
chr6 (6-96)||(33430252-33430342)
chr6 (8-96)||(30457598-30457686)
chr6 (1-96)||(15974694-15974789)
chr6 (1-96)||(24900860-24900955)
chr6 (1-49)||(13689931-13689979)
chr6 (1-96)||(17551269-17551363)
chr6 (1-96)||(31077880-31077975)
chr6 (1-96)||(31883193-31883288)
chr6 (1-59)||(5080494-5080552)
chr6 (55-96)||(91801-91842)
[»] chr3 (58 HSPs)
chr3 (1-96)||(35376971-35377066)
chr3 (1-96)||(28539630-28539725)
chr3 (1-96)||(37503637-37503732)
chr3 (7-97)||(44463449-44463539)
chr3 (1-96)||(5114164-5114259)
chr3 (1-96)||(41309203-41309298)
chr3 (4-96)||(42889074-42889166)
chr3 (1-95)||(42358529-42358623)
chr3 (12-96)||(44383286-44383370)
chr3 (1-92)||(13348028-13348119)
chr3 (1-96)||(35201324-35201419)
chr3 (1-96)||(46623993-46624088)
chr3 (5-96)||(55151607-55151698)
chr3 (1-59)||(44413849-44413907)
chr3 (13-96)||(21217610-21217693)
chr3 (13-96)||(23592556-23592639)
chr3 (13-96)||(37056947-37057030)
chr3 (2-96)||(24256661-24256755)
chr3 (2-96)||(32924171-32924265)
chr3 (2-96)||(44413285-44413379)
chr3 (2-96)||(51465631-51465725)
chr3 (1-94)||(5244315-5244408)
chr3 (1-94)||(11630642-11630735)
chr3 (1-65)||(8847196-8847260)
chr3 (1-96)||(27541392-27541487)
chr3 (1-96)||(36670904-36670999)
chr3 (1-96)||(38926714-38926809)
chr3 (1-96)||(42356974-42357069)
chr3 (8-53)||(14226638-14226683)
chr3 (1-65)||(20547911-20547975)
chr3 (1-96)||(288812-288907)
chr3 (32-95)||(23155329-23155392)
chr3 (29-96)||(23600707-23600774)
chr3 (1-96)||(33939324-33939419)
chr3 (5-96)||(34627771-34627862)
chr3 (1-96)||(35597248-35597343)
chr3 (29-96)||(52326133-52326200)
chr3 (1-96)||(52939737-52939832)
chr3 (2-96)||(19149077-19149171)
chr3 (2-96)||(31157567-31157661)
chr3 (31-92)||(39630511-39630572)
chr3 (1-65)||(45711360-45711424)
chr3 (1-96)||(16969456-16969551)
chr3 (1-44)||(32587739-32587782)
chr3 (1-44)||(35299816-35299859)
chr3 (1-96)||(44813222-44813317)
chr3 (1-96)||(44856039-44856134)
chr3 (29-92)||(47472443-47472506)
chr3 (1-96)||(49780630-49780725)
chr3 (1-96)||(52254028-52254123)
chr3 (1-44)||(55361175-55361218)
chr3 (1-59)||(41505577-41505635)
chr3 (1-47)||(50876301-50876347)
chr3 (1-50)||(33791706-33791755)
chr3 (2-94)||(12762581-12762673)
chr3 (2-94)||(34532276-34532368)
chr3 (1-45)||(36755991-36756035)
chr3 (1-65)||(37302632-37302696)
[»] chr2 (45 HSPs)
chr2 (1-96)||(8848587-8848682)
chr2 (1-96)||(27490620-27490715)
chr2 (1-96)||(2076655-2076750)
chr2 (1-96)||(41195670-41195765)
chr2 (7-92)||(29349598-29349683)
chr2 (1-96)||(3838770-3838865)
chr2 (1-96)||(9647218-9647313)
chr2 (13-96)||(13333060-13333143)
chr2 (1-96)||(37737861-37737956)
chr2 (2-96)||(22888707-22888801)
chr2 (1-102)||(9207676-9207777)
chr2 (4-96)||(19633371-19633464)
chr2 (4-96)||(19830272-19830365)
chr2 (1-96)||(1248772-1248867)
chr2 (4-95)||(6049236-6049327)
chr2 (1-96)||(7698257-7698352)
chr2 (1-96)||(18254099-18254194)
chr2 (1-92)||(18846697-18846788)
chr2 (13-96)||(41056637-41056720)
chr2 (2-96)||(32477419-32477513)
chr2 (1-94)||(19642684-19642777)
chr2 (13-96)||(3097751-3097834)
chr2 (1-96)||(9990777-9990872)
chr2 (13-96)||(25270472-25270555)
chr2 (1-96)||(44654710-44654805)
chr2 (2-94)||(39147853-39147945)
chr2 (1-96)||(1907653-1907748)
chr2 (1-96)||(7663957-7664051)
chr2 (1-96)||(16011518-16011613)
chr2 (1-96)||(43487465-43487560)
chr2 (2-96)||(42421788-42421882)
chr2 (1-95)||(42091393-42091489)
chr2 (1-45)||(12070934-12070978)
chr2 (1-96)||(34944980-34945075)
chr2 (1-92)||(41042340-41042431)
chr2 (9-44)||(42821465-42821500)
chr2 (1-59)||(6511337-6511395)
chr2 (1-34)||(10521309-10521342)
chr2 (1-50)||(16973697-16973746)
chr2 (13-50)||(33273523-33273560)
chr2 (43-96)||(42434247-42434300)
chr2 (1-49)||(1352475-1352523)
chr2 (8-44)||(7667204-7667240)
chr2 (8-96)||(28494953-28495041)
chr2 (4-96)||(31414999-31415091)
[»] chr1 (57 HSPs)
chr1 (1-96)||(26207928-26208022)
chr1 (2-96)||(18434882-18434976)
chr1 (1-96)||(31827037-31827132)
chr1 (1-96)||(44519041-44519136)
chr1 (1-96)||(50149032-50149127)
chr1 (2-95)||(45333798-45333891)
chr1 (1-96)||(19947634-19947729)
chr1 (1-92)||(26020970-26021061)
chr1 (1-96)||(30467423-30467518)
chr1 (1-96)||(30570610-30570705)
chr1 (12-90)||(51137547-51137625)
chr1 (8-96)||(21401491-21401579)
chr1 (1-96)||(3981916-3982011)
chr1 (1-96)||(9566850-9566945)
chr1 (13-96)||(25672440-25672523)
chr1 (1-96)||(33100894-33100989)
chr1 (1-96)||(45640388-45640482)
chr1 (13-96)||(46907293-46907376)
chr1 (1-96)||(48470725-48470820)
chr1 (1-96)||(49065254-49065349)
chr1 (1-92)||(50932390-50932481)
chr1 (13-95)||(43775304-43775386)
chr1 (1-94)||(35369786-35369879)
chr1 (1-96)||(649855-649950)
chr1 (1-69)||(8846060-8846130)
chr1 (1-96)||(19055649-19055744)
chr1 (1-96)||(26469445-26469540)
chr1 (1-96)||(27464947-27465042)
chr1 (1-96)||(31088267-31088362)
chr1 (1-92)||(37685415-37685506)
chr1 (1-92)||(37700012-37700103)
chr1 (37-92)||(40328663-40328718)
chr1 (1-96)||(50726138-50726233)
chr1 (3-92)||(6809668-6809757)
chr1 (7-64)||(51436601-51436658)
chr1 (1-65)||(37274954-37275018)
chr1 (1-96)||(52576191-52576287)
chr1 (1-96)||(45121371-45121465)
chr1 (1-59)||(6693243-6693301)
chr1 (12-96)||(2571732-2571817)
chr1 (1-50)||(29359723-29359772)
chr1 (1-62)||(50775080-50775141)
chr1 (1-53)||(15082983-15083035)
chr1 (2-50)||(27533420-27533468)
chr1 (1-96)||(9988038-9988133)
chr1 (1-96)||(18512233-18512328)
chr1 (1-92)||(37619630-37619721)
chr1 (1-96)||(51571236-51571331)
chr1 (31-96)||(48103252-48103318)
chr1 (3-96)||(2269462-2269555)
chr1 (32-93)||(8447854-8447914)
chr1 (8-69)||(44517878-44517939)
chr1 (1-62)||(44914496-44914557)
chr1 (8-65)||(51718547-51718604)
chr1 (1-65)||(23645497-23645561)
chr1 (1-96)||(26208120-26208218)
chr1 (17-92)||(37186948-37187023)
[»] chr7 (42 HSPs)
chr7 (1-96)||(24614206-24614301)
chr7 (1-96)||(31445404-31445499)
chr7 (1-96)||(35072252-35072347)
chr7 (1-96)||(40417860-40417955)
chr7 (1-96)||(41189431-41189528)
chr7 (29-96)||(9428530-9428597)
chr7 (1-96)||(35098593-35098688)
chr7 (13-96)||(46022157-46022240)
chr7 (13-96)||(7701642-7701725)
chr7 (1-95)||(35207587-35207679)
chr7 (1-96)||(38956508-38956603)
chr7 (1-96)||(48062143-48062238)
chr7 (1-63)||(30064525-30064587)
chr7 (2-96)||(35627910-35628004)
chr7 (2-96)||(47391215-47391309)
chr7 (1-93)||(4292514-4292607)
chr7 (31-96)||(38944913-38944978)
chr7 (1-45)||(36352525-36352569)
chr7 (1-96)||(25192807-25192902)
chr7 (1-96)||(39110951-39111044)
chr7 (1-96)||(41018750-41018845)
chr7 (2-77)||(41863538-41863613)
chr7 (1-96)||(43025426-43025521)
chr7 (7-93)||(44649221-44649307)
chr7 (12-96)||(6522163-6522250)
chr7 (2-96)||(41989630-41989726)
chr7 (1-65)||(22918090-22918154)
chr7 (2-50)||(22925220-22925268)
chr7 (1-96)||(38259148-38259244)
chr7 (1-45)||(41430092-41430136)
chr7 (1-69)||(44189227-44189295)
chr7 (1-65)||(44895493-44895557)
chr7 (1-96)||(3937013-3937108)
chr7 (8-95)||(42552991-42553078)
chr7 (29-96)||(43942746-43942813)
chr7 (2-96)||(32529746-32529840)
chr7 (1-59)||(38073306-38073364)
chr7 (31-96)||(38347660-38347726)
chr7 (15-67)||(11326001-11326053)
chr7 (14-98)||(32803788-32803872)
chr7 (1-45)||(35822915-35822959)
chr7 (1-45)||(42584889-42584933)
[»] chr4 (64 HSPs)
chr4 (1-96)||(38376380-38376475)
chr4 (2-96)||(39195144-39195238)
chr4 (1-96)||(2575680-2575775)
chr4 (13-96)||(34616659-34616742)
chr4 (1-96)||(39440570-39440665)
chr4 (1-96)||(39654910-39655005)
chr4 (1-94)||(37997340-37997433)
chr4 (2-94)||(27050978-27051070)
chr4 (4-96)||(29175314-29175406)
chr4 (8-95)||(19473847-19473934)
chr4 (1-96)||(43175070-43175165)
chr4 (1-95)||(42395928-42396022)
chr4 (1-94)||(11672015-11672108)
chr4 (3-96)||(31641455-31641548)
chr4 (8-96)||(21777459-21777547)
chr4 (2-70)||(39478524-39478592)
chr4 (1-96)||(26492093-26492188)
chr4 (13-96)||(38382419-38382502)
chr4 (1-96)||(42853663-42853758)
chr4 (1-96)||(44539820-44539915)
chr4 (13-96)||(47181939-47182022)
chr4 (13-96)||(48402087-48402170)
chr4 (1-96)||(53801649-53801744)
chr4 (1-95)||(11068774-11068868)
chr4 (1-95)||(24575742-24575836)
chr4 (14-96)||(56363935-56364017)
chr4 (1-65)||(40348880-40348944)
chr4 (4-95)||(46038752-46038841)
chr4 (13-96)||(515535-515618)
chr4 (1-96)||(21775232-21775327)
chr4 (1-96)||(26732311-26732406)
chr4 (1-96)||(36177992-36178087)
chr4 (1-96)||(56474657-56474752)
chr4 (1-95)||(10250406-10250500)
chr4 (1-89)||(35897787-35897874)
chr4 (1-49)||(50608561-50608609)
chr4 (32-105)||(3316471-3316546)
chr4 (1-96)||(7632351-7632446)
chr4 (1-88)||(10474010-10474097)
chr4 (1-96)||(23369222-23369317)
chr4 (1-96)||(26724862-26724957)
chr4 (1-96)||(37297135-37297229)
chr4 (1-96)||(50831645-50831740)
chr4 (1-96)||(51986128-51986223)
chr4 (1-59)||(2268434-2268492)
chr4 (4-96)||(1627445-1627540)
chr4 (1-90)||(38134439-38134528)
chr4 (1-45)||(31574880-31574924)
chr4 (16-56)||(39447848-39447888)
chr4 (1-96)||(5622544-5622639)
chr4 (1-80)||(32130145-32130224)
chr4 (5-96)||(50721634-50721725)
chr4 (2-44)||(12387607-12387649)
chr4 (32-94)||(19748752-19748814)
chr4 (32-94)||(19790992-19791054)
chr4 (31-96)||(38510663-38510726)
chr4 (22-96)||(39606079-39606153)
chr4 (35-96)||(5233560-5233621)
chr4 (3-96)||(31090593-31090686)
chr4 (32-96)||(47744402-47744467)
chr4 (13-65)||(31995836-31995888)
chr4 (1-49)||(46634186-46634234)
chr4 (1-53)||(49449096-49449148)
chr4 (1-44)||(52895314-52895358)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-96)||(20791-20886)
[»] scaffold0519 (1 HSPs)
scaffold0519 (1-96)||(11868-11963)
[»] scaffold0087 (2 HSPs)
scaffold0087 (13-96)||(53251-53334)
scaffold0087 (5-85)||(24439-24519)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-59)||(35609-35667)
[»] scaffold0199 (1 HSPs)
scaffold0199 (4-96)||(8757-8849)
[»] scaffold0098 (1 HSPs)
scaffold0098 (8-92)||(49388-49472)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-96)||(76509-76604)
[»] scaffold0019 (1 HSPs)
scaffold0019 (32-96)||(71478-71542)


Alignment Details
Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 33045110 - 33044962
Alignment:
Q  97 atatatagagaagaatagagtgaatgatgatttatttattattcacactgattcaaatggtggtacaaatgtacaatagtta----tatagcccgtgatt 192  Q
    ||||| ||||||||||||||||||||| ||||||||    ||||||||||||| ||||||||||||||||||||||||||||    ||||||||||||||    
T  33045110 atatagagagaagaatagagtgaatgacgatttatt----attcacactgattgaaatggtggtacaaatgtacaatagttaattatatagcccgtgatt 33045015  T
Q  193 ttgagaacccaaacacaagacacaatcattcatatgctcaaggtttccctttg 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33045014 ttgagaacccaaacacaagacacaatcattcatatgctcaaggtttccctttg 33044962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39054673 - 39054768
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  39054673 ctattgctttgatttttgtgcaaatatatcattttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaataacacaac 39054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 7552944 - 7552857
Alignment:
Q  9 ttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||| ||||||||||  ||||||||||||||||||    
T  7552944 ttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaac 7552857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 2972410 - 2972504
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||||||||||||||||||  |||||| ||| || ||||||||||| ||||||||||| |||  || |||||||||||||||||||||    
T  2972410 ctattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5168269 - 5168364
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||| || ||  |||||||||||||||||||||  || ||||||||||| |||| || || |||||||||||||||||||    
T  5168269 ctattgctttgatttttgtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaac 5168364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39591766 - 39591861
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||| ||||||||| | ||||||||||||||||| |||| || ||||||| ||| |||| |||||| ||||||||||||||||||    
T  39591766 ctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaac 39591861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39592158 - 39592253
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||| ||||||||| | ||||||||||||||||| |||| || ||||||| ||| |||| |||||| ||||||||||||||||||    
T  39592158 ctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaac 39592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7287174 - 7287079
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||| ||  |||||||||||||||||||||| || ||||||||||| |||  || || |||||||||||||||||||    
T  7287174 ctattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 7287079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13168608 - 13168711
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaacatat 100  Q
    ||||| ||||| |||||||| || ||| |||||| |||||||||||||||||| ||||||||||| |||  || || |||||| |||||||||||| |||    
T  13168608 ctattactttggtttttgtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaacttat 13168707  T
Q  101 atag 104  Q
    ||||    
T  13168708 atag 13168711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 33037606 - 33037701
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  33037606 ctattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 33037701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27487973 - 27488062
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataa 90  Q
    ||||||||||| |||||||| |||||| | |||||||||||||||||||  ||||| ||||| |||||||  ||||| ||||||||||||    
T  27487973 ctattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttatctcaaaaattatcataaaaatagatgttcaaataa 27488062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 13309975 - 13310063
Alignment:
Q  7 ctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||| ||||||||| ||||  ||||||||||||||||| ||||||| || ||||| || ||||||||||  |||||||||||||||||    
T  13309975 ctttggtttttgtgttaatacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaa 13310063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1671628 - 1671723
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||| ||  |||||| |||||||||||||||||| ||||||||||| |||  || ||  ||||||||||||||||||    
T  1671628 ctattgttttggtttttgtgtcagtacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaac 1671723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 8686978 - 8687069
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 93  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||||| | | ||||||| |||  || || ||||||||||||||||    
T  8686978 tattgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacac 8687069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 17626084 - 17626167
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  17626084 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 17626167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26791229 - 26791134
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  26791229 ctattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 26791134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28306117 - 28306022
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| | |||||| || ||  |||||||||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  28306117 ctattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 28306022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36739034 - 36739129
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  ||||||  |||||||||||||| || |||||||| ||||||  || ||  ||||||||||||||||||    
T  36739034 ctattgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaac 36739129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7076553 - 7076464
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataa 90  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || || |||||||||||||    
T  7076553 ctattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14051300 - 14051232
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatca 69  Q
    |||||| |||| |||||||| || ||  |||||||||||||||||||||| || |||||||||||||||    
T  14051300 ctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatca 14051232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35634821 - 35634725
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttc-tttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| |||||||| |||||  |||||||| |||||||||||||| |||||| ||||||| |||  || ||  ||||||||||||||||||    
T  35634821 ctattgttttggtttttgtgccaataattcattttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaac 35634725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1274444 - 1274538
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||| |||||  ||||||||||||||| ||  || ||||||| |||  || ||  ||||||||||||||||||    
T  1274444 ctattgctttggtttttgtgtcaatatctcattccctttgtaaaattttggtt-gcataaaagttgtcacatatatggatgttcaaataacacaac 1274538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41321341 - 41321436
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| ||||| ||||||||||||||  |||||| ||||||||||||||| || |||||||| || |||  || ||  || |||||||||||||||    
T  41321341 ctattactttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaac 41321436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 1764311 - 1764405
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| ||||| || || ||  |||||| |||| |||||||||| || ||||||||||| |||  || || |||||||||||||||||||    
T  1764311 tattgctttggtttttatgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 1764405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 18258777 - 18258683
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||| ||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  18258777 tatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 18258683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8097338 - 8097390
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgatt 53  Q
    ||||||||||||||||||||||||||  || |||||||| ||||||| |||||    
T  8097338 ctattgctttgatttttgtgtcaatacttctttttctttataaaattatgatt 8097390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33958244 - 33958180
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||||||||| ||||||||||||||| || ||||||||||||| || || || ||| |||||||    
T  33958244 ctattgctttggtttttgtgtcaatatctctttttctttgtaaatttatggttgtcataaaagtt 33958180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 2429106 - 2429157
Alignment:
Q  14 ttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||||||||||||||| |||||||||||||||| | ||| || ||||||||    
T  2429106 ttttgtgtcaatatatctttttctttgtaaaattataattgtctcaaaagtt 2429157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14923159 - 14923254
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  ||||||  |||||||||||||| || |||| |||||| |||  || ||  ||||||||||||||||||    
T  14923159 ctattgctttggtttttgtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaac 14923254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15479555 - 15479650
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| || || ||||||||  ||||||| ||||||||||||| ||| ||||||||||| |||  |  ||  ||||||||||||||||||    
T  15479555 ctattgttttggttattttgtcaatacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaac 15479650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18660845 - 18660939
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| |||||  |||||| |||||||||| ||||||| | ||||||||||| |  || || ||||||| ||||| |||||    
T  18660845 ctattgctttggtttttgtgccaatacttcatttcctttgtaaaagtttgattgt-acaaaagttatgacatatatgaatgttcgaataatacaac 18660939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21156074 - 21156169
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| ||||   | |||||||||||||||||||| || |  |||  |||||||| ||||   ||||||||||||||||||    
T  21156074 ctattgctttggtttttgtgccaatcacttattttctttgtaaaattttgtttgttgcaagggttatcatataaaatgatgttcaaataacacaac 21156169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22972203 - 22972298
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||| | ||||  | |||||||||||||||||||  || || |||||||| | || |||||  ||||||||||||||||||    
T  22972203 ctattgttttggtttttgtattaataccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaac 22972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 21943679 - 21943637
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaa 44  Q
    |||||||||||||||| ||||||||| | ||||||||||||||    
T  21943679 tattgctttgatttttctgtcaatatcttattttctttgtaaa 21943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 1079936 - 1079879
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    ||||||||||  ||||||| |||||  ||||||||||||||||||||| ||| |||||    
T  1079936 tattgctttggattttgtgccaatacctcattttctttgtaaaattttaattgtcaca 1079879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 42478144 - 42478075
Alignment:
Q  32 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaacatata 101  Q
    |||| ||||||||||| ||||| || ||||||||||||   ||||||||||| |||||||| ||| ||||    
T  42478144 ttttttttgtaaaattatgattgtcgcaaaagttatcaatcaaataaatgtttaaataacataacttata 42478075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 24468265 - 24468201
Alignment:
Q  12 atttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaat 76  Q
    ||||||||||||||||||| ||||||  ||||| || || |||||| ||||||| ||| ||||||    
T  24468265 atttttgtgtcaatatatctttttctcagtaaatttatggttatcataaaagttttcacctaaat 24468201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37133847 - 37133752
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||  ||||| ||||||||||||    
T  37133847 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaac 37133752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36816601 - 36816507
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||| |||  || ||| |||||||||||||||||    
T  36816601 ctattgctttgatttttgtgttaatacgtcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29025346 - 29025441
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||| || || |||||||| |||| |||||  ||||| ||||||||||||    
T  29025346 ctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaac 29025441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 27854753 - 27854661
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 93  Q
    |||||| ||||||||||||| |||||| | ||||||||||||||||||| ||| ||  ||||||||||||  |||| ||||||||||||||||    
T  27854753 ctattgttttgatttttgtgccaatatttaattttctttgtaaaattttaattgtcttaaaagttatcatgaaaatgaatgttcaaataacac 27854661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 11253527 - 11253432
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||| |  ||||||||||| |||| |  ||| |||||||||||| |||||    
T  11253527 ctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaac 11253432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36660435 - 36660340
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| || |||||||||||  ||||||||||| ||||||||||||| |||||||||||||||  |  ||  ||||||||||||||||||    
T  36660435 ctattgctttggttattgtgtcaatacttcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaac 36660340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 4054270 - 4054176
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| ||||||||||| ||  ||||||  |||||||| |||||||| ||||||||||| |||  || ||||||||||||||||||||||    
T  4054270 tattgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaac 4054176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 24479323 - 24479404
Alignment:
Q  15 tttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||| |||||| ||||||||||||||  || |||||||||||||||| || || |||| ||||||||||||||    
T  24479323 tttgtgtcaatatctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaac 24479404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 10902791 - 10902880
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||      |||||||| || ||||||||||  || |||||||||||||||    
T  10902791 ctattgctttgatttttgtgccaatacatcattttctttgtaaaattt------tcacaaaaattgtcatctaaatggatattcaaataacacaac 10902880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27325844 - 27325939
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||||||||||| |||||| |||  || ||  ||||||||||||||||||    
T  27325844 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaac 27325939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37449410 - 37449315
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||  | ||  |||||| ||||||||||||||||||||||||||||||||||  || ||  || |||||||||||||||    
T  37449410 ctattgctttggtttttgtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaac 37449315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10731632 - 10731690
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||||||||| |||||    
T  10731632 ctattgctttgatttttgtgtcaatacttcatttcctttgtaaaattttgattgtcaca 10731690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 10839467 - 10839375
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 93  Q
    ||||||||||| |||||||| |||||| | |||||||||||||||||||  || || ||||| |||||||  ||||  |||||||||||||||    
T  10839467 ctattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttgtctcaaaaattatcataaaaatggatgttcaaataacac 10839375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22719526 - 22719621
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||  | ||  |||||||||||||||||||||| |||||||||||||| |||  || ||   |||||||||||||||||    
T  22719526 ctattgctttggtttttgtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaac 22719621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23754691 - 23754596
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| |||||||||||||   |||||||||||||||||||||| || |  |||| ||| |||| ||||  |||||||||||||||||||    
T  23754691 ctattgttttggtttttgtgtcaatcactcattttctttgtaaaattttggttgttgcaaaggttgtcatataaaataatgttcaaataacacaac 23754596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 32133425 - 32133504
Alignment:
Q  17 tgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||  | ||||| |||||||||||||| ||||| ||||| ||||||| |||||  ||||||||||||||||||    
T  32133425 tgtgtcaataccttattttatttgtaaaattttggttatctcaaaatttatcatataaatggatgttcaaataacacaac 32133504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34639619 - 34639710
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||| ||||| || |||||||| ||  ||||||| ||||||||||||||||| || ||||| ||||||| |||||  ||||||||||||||    
T  34639619 ctattactttggttattgtgtcactacctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataaca 34639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39856124 - 39856219
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||||||| |  |||||||||| || |  ||||| ||  ||||||||||||  |||||  |||||||||||||||||    
T  39856124 ctattgctttgatttttgtgtcaatatctatttttctttgttaattcatgattgtcttaaaagttatcattaaaatagttgttcaaataacacaac 39856219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 32501181 - 32501087
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||| ||||||||||||||||| ||  |||||| ||||||||||||||| || |||||||| || |||  || ||  |||||||||||||||||    
T  32501181 ctattactttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7271936 - 7272000
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||||||||| ||||||||||| ||| ||||||  |||| |||||||||||| |||||||||||    
T  7271936 ctattgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgtcacaaaagtt 7272000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45405618 - 45405662
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    |||||||||||||||| |||||||||||| |||||||||||||||    
T  45405618 ctattgctttgattttcgtgtcaatatatgattttctttgtaaaa 45405662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12898914 - 12898823
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||||||||| |||||| | || ||| |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||    
T  12898914 ctattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 12898823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13106566 - 13106661
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||  || ||||||||||||| || || || | | ||||||| ||| ||||||   |||||||||||||||||    
T  13106566 ctattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgttcaaataacacaac 13106661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34186693 - 34186788
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| ||||| ||||||||||| ||  |||||| ||||| |||||||||||| ||||||||||| |||  |  ||  ||||||||||||||||||    
T  34186693 ctattactttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaac 34186788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42768290 - 42768385
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| |   |||||| ||||||||||||||  || |||||||| ||||||  || ||  ||||||||||||||||||    
T  42768290 ctattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaac 42768385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 36251425 - 36251503
Alignment:
Q  14 ttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    |||||||||| ||  |||||| |||||||||||||||||| |||| ||||||||||  || ||  ||||||||||||||    
T  36251425 ttttgtgtcactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43397867 - 43397929
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaag 63  Q
    ||||| ||||| |||||||| || ||| |||||||||||||||||||||| || |||||||||    
T  43397867 ctattactttggtttttgtgccactatctcattttctttgtaaaattttggttgtcacaaaag 43397929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 44976990 - 44976894
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatca-ttttctttgtaaaattttgattatc-acaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| ||||| |||||||||||||| ||| |||||||| ||||||||||||| || | |||| ||||||| ||| ||| | ||||||||| |||||    
T  44976990 tattgttttgaattttgtgtcaatatttcatttttctttataaaattttgattgtctaaaaaaattatcatataagtaattattcaaataatacaac 44976894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 7598796 - 7598889
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| |||| ||||| ||||||||  | ||||||| |||||| ||||| || || |||||||| |||| ||| | |||||||||||||||||||    
T  7598796 tattgttttggtttttatgtcaataccttattttctatgtaaa-ttttggttgtctcaaaagttttcatataattgaatgttcaaataacacaac 7598889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 2883281 - 2883322
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaatttt 49  Q
    |||||||||||||| ||||  |||||||||||||||||||||    
T  2883281 tttgatttttgtgttaatacttcattttctttgtaaaatttt 2883322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 6440171 - 6440212
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  6440171 ttgctttgatttttgtgtcaatacatacttttctttgtaaaa 6440212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3413177 - 3413133
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    ||||||||||| |||||||| ||||| || |||||||||||||||    
T  3413177 ctattgctttggtttttgtgccaatacatgattttctttgtaaaa 3413133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 12734995 - 12734903
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    |||| ||||||||||||||||||||  |  ||||| ||||||| ||||  || ||||| || |||||||  |||| | |||||||||||||||    
T  12734995 tattactttgatttttgtgtcaatacctacttttcattgtaaatttttagttgtcacataaattatcatacaaattattgttcaaataacaca 12734903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33100455 - 33100411
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    ||||| |||||||||||||||||||| ||  ||||||||||||||    
T  33100455 ctattactttgatttttgtgtcaatacatacttttctttgtaaaa 33100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41639782 - 41639738
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    |||||||||||||||||||||||| | ||  ||||||||||||||    
T  41639782 ctattgctttgatttttgtgtcaacacatacttttctttgtaaaa 41639738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 277077 - 277172
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||||||  |||||| ||||||||||||    
T  277077 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaac 277172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 4820453 - 4820548
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| || ||||||||||||| ||||||  |||||||||||||||||    
T  4820453 ctattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaac 4820548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22079548 - 22079453
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||  ||||||||||  ||||||||||||||||||    
T  22079548 ctattgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaac 22079453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11612274 - 11612369
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| |||||||||  ||||  |||||||||||||||||||||||||||||||||| ||||||  || |||||| |||||||||||||||    
T  11612274 ctattgctttaatttttgtgcaaatacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaac 11612369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26595435 - 26595530
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||| || |  |||||||| |||| |||||  ||||||||||||||||||    
T  26595435 ctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaac 26595530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3853292 - 3853206
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaa 87  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||  || || |||||||| |||| ||||| ||||||||||    
T  3853292 ctattgctttgatttttgtgtcaatatctcattttctttgtaaaatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 33603264 - 33603170
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||  |||  ||||||| |||| |||||  ||||||||| ||||||||    
T  33603264 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttgacaatcttaaaagttgtcatataaatggatgttcaaaaaacacaac 33603170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 32316913 - 32316818
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  |||||||||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  32316913 ctattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 32316818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2242010 - 2241917
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||| |||||||||||||   ||||||||||||||  |||||| || |||||||||||||||| |||| ||| |||||||||||||||    
T  2242010 ctattgctttggtttttgtgtcaatgcctcattttctttgtattattttggttgtcacaaaagttatcatgtaaagaaa-gttcaaataacacaa 2241917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 3552134 - 3552046
Alignment:
Q  7 ctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||| || |||||||||||  | |||||||||||||| || ||||||||||||||||||||||| ||||   ||||||||||||||||    
T  3552134 ctttgcttattgtgtcaataccttattttctttgtaaatttatgattatcacaaaagttatcatccaaatggttgttcaaataacacaa 3552046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 11014974 - 11014890
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaa 86  Q
    ||||| ||| |||||||||||||||  ||||||||||  ||||||||||||| || ||||||||||||| |||||| ||||||||    
T  11014974 tattgatttaatttttgtgtcaatacctcattttcttcataaaattttgattgtctcaaaagttatcatataaatagatgttcaa 11014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 16199548 - 16199631
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  16199548 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 16199631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 14818019 - 14818113
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| |||| |||||||| || ||  |||||| |||| |||||||||| || ||||||||||| |||| || ||||||||||||||||||||||    
T  14818019 tattgttttggtttttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaac 14818113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 30423536 - 30423443
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||| |||||| ||||||  ||||||||||| ||||  ||||||| |  ||||||||||||  |||||| |||||||||||||||||    
T  30423536 tattgctttgaattttgtatcaatacctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacacaa 30423443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34047473 - 34047537
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||||||||| |||||||| |||||| || ||||||||||||||||||| || |||||||||||    
T  34047473 ctattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgtcacaaaagtt 34047537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 552879 - 552974
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  552879 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 552974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1156806 - 1156901
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| ||||| |||||||| || ||| |||||| ||||  |||||||||||| |||||||||||||||  || ||  ||||||||||||||||||    
T  1156806 ctattactttggtttttgtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaac 1156901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 5694136 - 5694041
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||||||||||||||||||  |||||| ||||||||||||| | || || |||||||| |||  || || |||||| ||||||||||||    
T  5694136 ctattgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaac 5694041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 18737551 - 18737460
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 93  Q
    ||||| |||| |||||||| |||||  |||||||||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||    
T  18737551 tattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 33430342 - 33430252
Alignment:
Q  6 gctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  || || ||||| |||||||||||||    
T  33430342 gctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaac 33430252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 30457598 - 30457686
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||| ||||||||||||||  ||||||||| ||| |||||||| ||||| |||||||| |||| |||||  ||||| || |||||||||    
T  30457598 tttggtttttgtgtcaatacctcattttctatgtgaaattttggttatctcaaaagttgtcatataaatggatgttgaattaacacaac 30457686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15974694 - 15974789
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||| | ||  |||||| ||||||||||||||| || ||||||||||| | |  || ||  ||||||||||||||||||    
T  15974694 ctattgctttggtttttgtgttactacttcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaac 15974789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24900860 - 24900955
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| ||||   ||||||||||||||||||||| ||| |  |||| ||| |||| ||||   ||||||||||||||||||    
T  24900860 ctattgctttggtttttgtgccaatcactcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaac 24900955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13689979 - 13689931
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 49  Q
    ||||||||||||||||||||||||||  |||||| |||| |||||||||    
T  13689979 ctattgctttgatttttgtgtcaatacctcatttcctttataaaatttt 13689931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17551363 - 17551269
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| |||||||||||||   ||||||||||| |||| ||||| || ||||||| | | ||||  ||||| ||||||||||||||||||    
T  17551363 ctattgttttggtttttgtgtcaatccctcattttctttataaa-ttttggttgtcacaaatgctgtcataaaaatagatgttcaaataacacaac 17551269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31077880 - 31077975
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||| ||  ||| || ||||||||||||||| || ||||||||||| |||  |  || ||| |||||||||||||||    
T  31077880 ctattgttttggtttttgtgtcactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaac 31077975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 31883288 - 31883193
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||| |  || |||||||||||||||| || || || ||||| || |||   |||||  ||||||||||| |||||    
T  31883288 ctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatagttgttcaaataatacaac 31883193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5080552 - 5080494
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    ||||||||||  ||||||||||| ||  |||||| ||||||||||||||| ||||||||    
T  5080552 ctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttggttatcaca 5080494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 91801 - 91842
Alignment:
Q  55 tcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| | ||||||||||||||||||||||||||||    
T  91801 tcacaacagttgtaatctaaataaatgttcaaataacacaac 91842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35377066 - 35376971
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||  ||||||||||||||||||    
T  35377066 ctattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaac 35376971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28539725 - 28539630
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||| ||||||| ||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  28539725 ctattgctttgacttttgtgccaaaacatcattttctttgcaaaattttggttatcacaaaagttatcatctaaatggatgttcaaataacacaac 28539630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37503732 - 37503637
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||||||| || |||||||||||||||  || ||||||||||||||||||||||    
T  37503732 ctattgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaac 37503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 44463449 - 44463539
Alignment:
Q  7 ctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaaca 97  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||| ||| |  |||||||||||||||||||    
T  44463449 ctttgatttttgtatcaatatcacattttctttgtaaaattttgattatctcaaaagttatcatataatttgatgttcaaataacacaaca 44463539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5114164 - 5114259
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||| |||| || |||  |||||| ||||||||||||||||||    
T  5114164 ctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaac 5114259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41309203 - 41309298
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||   || ||  ||||||||||||||||||    
T  41309203 ctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaac 41309298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 42889074 - 42889166
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||| |||||||| |||||  |||||||||||||||||||||| ||||  |||||||| ||||||||||| ||||| ||||||||||||    
T  42889074 ttgctttggtttttgtgccaataactcattttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaac 42889166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 42358623 - 42358529
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||||||||| ||||||||||| |||  || ||  |||||||||||||||||    
T  42358623 ctattgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 44383286 - 44383370
Alignment:
Q  12 atttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||  ||||||||||| ||||||||||||| || |||||||| |||| |||||  ||||||||||||||||||    
T  44383286 atttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaac 44383370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13348119 - 13348028
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||||||||| ||||||| ||||||  |||||||||||||||||||||| || || |||||||| |||| |||||  ||||||||||||||    
T  13348119 ctattgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 13348028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35201419 - 35201324
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||||||| | |||||||||||| |||||| ||| || |||||||| |||| |||||  ||||||||||||||||||    
T  35201419 ctattgttttggtttttgtgtcaatatcttattttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacacaac 35201324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 46623993 - 46624088
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||  |  ||  ||||||||||||||||||    
T  46623993 ctattgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaac 46624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 55151698 - 55151607
Alignment:
Q  5 tgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||| ||||||||||||||  |||||| |||||||||||||| ||| | ||||||||| |||  || ||||||||||||||||||||||    
T  55151698 tgctttggtttttgtgtcaatacttcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaac 55151607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 44413907 - 44413849
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  44413907 ctattgctttggtttttgtgtcaatatctcattttctttgtaaaattttgattgtcaca 44413849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 21217610 - 21217693
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  21217610 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 21217693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 23592556 - 23592639
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  23592556 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 23592639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 37057030 - 37056947
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  |||||||||||||||||| ||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  37057030 tttttgtgtcaatacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 37056947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 24256755 - 24256661
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| |||||||||||| ||||||  |||||| |||||||||||||| ||| ||||||||||| |||  || ||| || |||||||||||||||    
T  24256755 tattgttttgatttttgtatcaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaac 24256661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 32924265 - 32924171
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  32924265 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 32924171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 44413379 - 44413285
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||| | |||||||| |||||  |||||| |||||||||||||| ||| ||||||||||| |||  || ||| ||||||||||||||||||    
T  44413379 tattgcttcggtttttgtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaac 44413285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 51465725 - 51465631
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||||| ||||||| ||| ||| | |||| || ||  |||| ||||||| |||||||||||| |||| |||||||    
T  51465725 tattgctttgatttttgtgtcaatatttcattttttttttaagactttggttgtctaaaaaattatcatataaataaatgtttaaatgacacaac 51465631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5244315 - 5244408
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || |||||||| || |||  || ||||||||||||||||||||    
T  5244315 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11630735 - 11630642
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||| ||||| ||||| | ||||||  ||||||||||||||||||||| ||| || ||||| || |||| ||||| |||||||||||||||||    
T  11630735 ctattactttggtttttatatcaatacttcattttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8847196 - 8847260
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    |||||| |||| |||||||| |||||  ||||||| |||||||||||||||||||||||||||||    
T  8847196 ctattgttttggtttttgtgccaatacctcattttatttgtaaaattttgattatcacaaaagtt 8847260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27541487 - 27541392
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  27541487 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 27541392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36670999 - 36670904
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  ||||||  |||||||||||||| || |||||||||||||||  || ||  ||||||||||||||||||    
T  36670999 ctattgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaac 36670904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38926714 - 38926809
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  | |||| ||||||||||||||| || |||| |||||| |||  || ||| ||||||||||||||||||    
T  38926714 ctattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaac 38926809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 42357069 - 42356974
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || |||||||| || |||  || ||  ||||||||||||||||||    
T  42357069 ctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaac 42356974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 14226683 - 14226638
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgatt 53  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||    
T  14226683 tttggtttttgtgtcaatatttcattttctttgtaaaattttgatt 14226638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20547975 - 20547911
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    |||||||||||||||||||| || ||  |||||| ||||||||||||||| || |||||||||||    
T  20547975 ctattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagtt 20547911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 288812 - 288907
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||| ||||||  ||||||||||||||||| | |||| |||| |||  || ||  || |||||||||||||||    
T  288812 ctattgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaac 288907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 23155392 - 23155329
Alignment:
Q  32 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    |||||||||||||||| ||||||||  |||||||||||  ||||||  ||||||||||||||||    
T  23155392 ttttctttgtaaaattatgattatcttaaaagttatcaattaaatagttgttcaaataacacaa 23155329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 23600707 - 23600774
Alignment:
Q  29 tcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  23600707 tcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 23600774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 33939324 - 33939419
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  |||||| ||||| | ||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  33939324 ctattgctttggtttttgtgtcactacttcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 33939419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 34627862 - 34627771
Alignment:
Q  5 tgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||| | ||||| | |||||||||||||| || || || ||  | ||||||||||  |||||| |||||||||||||||||    
T  34627862 tgctttgatttttgtataaatatcttattttctttgtaaatttatggttgtcttataagttatcataaaaataattgttcaaataacacaac 34627771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35597248 - 35597343
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||| ||  || ||| ||||||||||||||| || ||||||||||| |||  || || ||| |||||||||||||||    
T  35597248 ctattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaac 35597343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 52326133 - 52326200
Alignment:
Q  29 tcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||||||||||||||||| ||| ||||||| |||| || ||  ||||||||||||||||||    
T  52326133 tcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaac 52326200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 52939737 - 52939832
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || |||| |||||| |||  || ||  ||||||||||||||||||    
T  52939737 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaac 52939832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 19149077 - 19149171
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| |||| |||||||| || ||  |||||| |||||||||||||||||| |||||||| || |||  || ||  ||||||||||||||||||    
T  19149077 tattgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaac 19149171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 31157661 - 31157567
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| ||||||||||||  |||||  | |||| |||||||||||||||||  ||||| |||||||||  || ||  ||||||||||||||||||    
T  31157661 tattgttttgatttttgtaccaatacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaac 31157567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 39630572 - 39630511
Alignment:
Q  31 attttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||||||||||||||||||||| ||  |||| |||| || |||||| ||||||||||||||    
T  39630572 attttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataaca 39630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45711424 - 45711360
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    |||||| |||| || |||||||||||  |||||||||||||||||||||| || | |||||||||    
T  45711424 ctattgttttggttattgtgtcaatacttcattttctttgtaaaattttggttgttacaaaagtt 45711360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 16969551 - 16969456
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||||||||| || || ||  |||||| ||||||||||||||  || ||||||||||| |||  || ||  ||||||||||||||||||    
T  16969551 ctattgttttgatttttatgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 16969456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32587782 - 32587739
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaa 44  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||    
T  32587782 ctattgctttggtttttgtgccaatatttcattttctttgtaaa 32587739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35299859 - 35299816
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaa 44  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||    
T  35299859 ctattgctttgatttttgtgtcaatacctcattttctttataaa 35299816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44813222 - 44813317
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||| | |||||||| || ||  | |||| ||||||||||||||||||  |||||||||| |||  || ||| |||||||||| |||||||    
T  44813222 ctattgcttgggtttttgtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaac 44813317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44856039 - 44856134
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| |||||||||||||| || ||  |||||| ||||||||||||||| || ||| | ||||| |||  || ||  ||||||||||||||||||    
T  44856039 ctatttctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaac 44856134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 47472443 - 47472506
Alignment:
Q  29 tcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    |||||| ||||||||||||||| || ||||||||||| |||  || ||| ||||||||||||||    
T  47472443 tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataaca 47472506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 49780725 - 49780630
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| |||||  || ||||||||||||| || || || ||| |||| ||||||  ||||||  | |||||||||||||||    
T  49780725 ctattgctttggtttttgtgccaatacctccttttctttgtaaatttatggttgtcataaaaattatcacttaaatagttattcaaataacacaac 49780630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 52254123 - 52254028
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  |||||| ||||||||||||||  || |||||||| || |||  || ||  |||||||||| |||||||    
T  52254123 ctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaac 52254028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 55361218 - 55361175
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaa 44  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||    
T  55361218 ctattgctttggtttttgtgtcaatacttcattttctttgtaaa 55361175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41505577 - 41505635
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    ||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || |||||    
T  41505577 ctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 41505635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50876347 - 50876301
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaatt 47  Q
    ||||||||||||||||||| ||||||  || ||||||||||||||||    
T  50876347 ctattgctttgatttttgtatcaatacctctttttctttgtaaaatt 50876301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33791755 - 33791706
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 50  Q
    |||||| ||||| |||||||||||||  ||||||||||||| ||||||||    
T  33791755 ctattgttttgacttttgtgtcaatacctcattttctttgtgaaattttg 33791706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 12762673 - 12762581
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    |||| ||||||||||||||||||||  |  ||||||||||||| || || || || || || || |||| ||||| | |||||||||||||||    
T  12762673 tattactttgatttttgtgtcaataactatttttctttgtaaatttatggttgtcccataaattgtcatgtaaatgattgttcaaataacaca 12762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 34532276 - 34532368
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||||||| |||||||| ||||| | |  |||||||||||||  | || || ||||| || ||||||| ||||| | |||||||||||||||    
T  34532276 tattgctttaatttttgtatcaatgtctacttttctttgtaaatatatggttgtcacataaattatcatgtaaatgattgttcaaataacaca 34532368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36756035 - 36755991
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||||    
T  36756035 ctattgctttgatttttgtgccaacatatacttttctttgtaaaa 36755991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37302632 - 37302696
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||| ||||| |||||||| || ||  |||||| ||||| |||||||||||| |||||||||||    
T  37302632 ctattactttggtttttgtgccactacctcatttcctttgcaaaattttgattgtcacaaaagtt 37302696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8848682 - 8848587
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||  ||||| ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  8848682 ctattgctttgatttttgtaccaatacatcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaac 8848587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27490715 - 27490620
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| ||||  ||||||||||||||||||    
T  27490715 ctattgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaac 27490620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2076655 - 2076750
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||| |||  |  ||  ||||||||||||||||||    
T  2076655 ctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaac 2076750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41195670 - 41195765
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||||||| || ||||||||||| | |  || || |||||||||||||||||||    
T  41195670 ctattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaac 41195765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 29349598 - 29349683
Alignment:
Q  7 ctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    |||||||||||||| | ||| || ||||||||||||||||||||||| ||||||||||| ||||||||||  ||||| ||||||||    
T  29349598 ctttgatttttgtgccgatacattattttctttgtaaaattttgattgtcacaaaagttgtcatctaaatggatgttgaaataaca 29349683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3838865 - 3838770
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||||||||||||||| |   |||||| |||||||||||||| ||||||||||||||| |||  || ||| ||||||||||||||||||    
T  3838865 ctattgttttgatttttgtgtcactgcttcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaac 3838770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9647218 - 9647313
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||||||   || || |||||||||||||||||||    
T  9647218 ctattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaac 9647313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 13333143 - 13333060
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||| |||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  13333143 tttttgtgtcaatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaac 13333060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37737956 - 37737861
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| ||||| || ||||||||||| |||  || ||  | ||||||||||||||||    
T  37737956 ctattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaac 37737861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 22888801 - 22888707
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| |||||||| |||||  |||||| |||||||||||||||||| ||||||||||| |||  || ||  ||||||||||||||||||    
T  22888801 tattgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaac 22888707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9207676 - 9207777
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaacatat 100  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || |||||||| ||||||  || ||| |||||||||||||||||| |||    
T  9207676 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaacttat 9207775  T
Q  101 at 102  Q
    ||    
T  9207776 at 9207777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 19633371 - 19633464
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatc-taaataaatgttcaaataacacaac 96  Q
    |||||||| ||||||| ||| ||  |||||| |||||||||||||||||| ||||||||||||||| | || |||||||||||||||| |||||    
T  19633371 ttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaac 19633464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 19830272 - 19830365
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatc-taaataaatgttcaaataacacaac 96  Q
    |||||||| ||||||| ||| ||  |||||| |||||||||||||||||| ||||||||||||||| | || |||||||||||||||| |||||    
T  19830272 ttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaac 19830365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1248772 - 1248867
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| |||||||||||||| ||||||||||||||| |||  || ||  ||||||||||||||||||    
T  1248772 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaac 1248867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 6049327 - 6049236
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    |||||||| |||||||| |||||  |||||| |||||||||||||||||| ||||||||||| |||  || ||  |||||||||||||||||    
T  6049327 ttgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7698257 - 7698352
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||| || ||  | |||| |||||||||||||| |||||||||||||||||||  |  ||| |||||| |||||||||||    
T  7698257 ctattgctttgatttttgtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaac 7698352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18254194 - 18254099
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||| |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  18254194 ctattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 18254099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 18846697 - 18846788
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||| |||||||||||||  ||||| |||||||| |||| |||||||||||| ||| |||| || ||||||||||  ||||||||||||||    
T  18846697 ctattactttgatttttgtaccaatacatcattttttttgcaaaattttgattgtcataaaaattgtcatctaaatggatgttcaaataaca 18846788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 41056720 - 41056637
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  41056720 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 41056637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 32477419 - 32477513
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||| | ||||  |||||| |||||| |||||||| || ||||||||||| |||  || || |||||||||||||||||||    
T  32477419 tattgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 32477513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 19642684 - 19642777
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    |||||||||||||||||||||||||   |||||||||||| |||||| || || || |||||||| |||| |||||  ||||| ||||||||||    
T  19642684 ctattgctttgatttttgtgtcaatgcttcattttctttgcaaaattgtggttgtctcaaaagttctcatataaatggatgtttaaataacaca 19642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 3097834 - 3097751
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||| ||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  3097834 tttttgtgtaaataactcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 3097751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9990777 - 9990872
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||  || ||  |||||| |||||||||||||| ||| |||||||||||||||  || ||  ||||||||||||||||||    
T  9990777 ctattgctttggtttttgtaccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaac 9990872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 25270555 - 25270472
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || | |||||| |||| |||||  ||||||||||||||||||    
T  25270555 tttttgtgtcaatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaac 25270472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44654710 - 44654805
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| ||||||||||||||| || | ||||||||||| |||||||||  || ||  |||||||||||| ||||| | | |||||||||||||||    
T  44654710 ctattgttttgatttttgtgtcgatttctcattttctttataaaattttagttgtcttaaaagttatcatataaattatttttcaaataacacaac 44654805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 39147853 - 39147945
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||| |||||||||||||||||||  ||||||| |||||||| || ||||| || |||||||| ||||  ||||   |||||||||||||||    
T  39147853 tattgttttgatttttgtgtcaatacctcattttttttgtaaatttatgattgtcccaaaagttgtcattaaaatggttgttcaaataacaca 39147945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1907748 - 1907653
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| ||||||||||||||||||    | ||||||||||||| || || || ||| | ||||| |||||||||| | |||||||||||||||||    
T  1907748 ctattgttttgatttttgtgtcaattccgctttttctttgtaaatttatggttgtcatacaagttgtcatctaaatgattgttcaaataacacaac 1907653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7664051 - 7663957
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||  || ||||||||||||| || || || ||| |||| || ||| |||||| | |||||||||||||||||    
T  7664051 ctattgctttggtttttgtgtcaatacctctttttctttgtaaatttatggttgtcataaaa-ttgtcacctaaatgattgttcaaataacacaac 7663957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16011518 - 16011613
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| ||||||| |||||||| ||| || |||| |||||||||||||  || || ||| ||||||||   |||||| |||||||||||||||||    
T  16011518 ctattgttttgattcttgtgtcactatctctttttttttgtaaaattttagttgtctcaagagttatcaatcaaataattgttcaaataacacaac 16011613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43487465 - 43487560
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || | |||||| || |||  || ||  ||||||||||||||||||    
T  43487465 ctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaac 43487560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 42421882 - 42421788
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| | |||||| || ||  |||||| |||| |||||||||| || ||||||||||| |||  || || |||||||||||||||||||    
T  42421882 tattgctttggtgtttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 42421788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 42091489 - 42091393
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttat--catctaaataaatgttcaaataacacaa 95  Q
    ||||||||||| ||||||||||| ||  || ||| ||||||||||||||| || |||||||| || |  ||| || ||| |||||||||||||||||    
T  42091489 ctattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaataacacaa 42091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12070934 - 12070978
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    |||||||||||||||| ||||||||| || |||||||||||||||    
T  12070934 ctattgctttgattttcgtgtcaatacatgattttctttgtaaaa 12070978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34945075 - 34944980
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||| || ||  ||||||  |||||||||||||| || |||| |||||| |||  || || ||| ||||| |||||||||    
T  34945075 ctattgctttgatttttgtgccactacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaac 34944980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 41042340 - 41042431
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||||||||| ||||| ||||||||| |||||| |||| |||||||||| || ||| |||| || |||  || ||  ||||||||||||||    
T  41042340 ctattgctttggtttttatgtcaatatctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataaca 41042431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 42821465 - 42821500
Alignment:
Q  9 ttgatttttgtgtcaatatatcattttctttgtaaa 44  Q
    |||||||||||||||||| |||||||||||||||||    
T  42821465 ttgatttttgtgtcaatacatcattttctttgtaaa 42821500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6511337 - 6511395
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    ||||||||||| ||||||||||| ||  |||||| |||| ||||||||||||| |||||    
T  6511337 ctattgctttggtttttgtgtcactacctcatttcctttataaaattttgattgtcaca 6511395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10521342 - 10521309
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattt 34  Q
    |||||||||||||||||||||| |||||||||||    
T  10521342 ctattgctttgatttttgtgtctatatatcattt 10521309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16973746 - 16973697
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 50  Q
    ||||| |||||||||||| |||||| | ||||||| ||||||||||||||    
T  16973746 ctattactttgatttttgggtcaatttctcattttatttgtaaaattttg 16973697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 33273560 - 33273523
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttg 50  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  33273560 tttttgtgtcaatatctcattttctttataaaattttg 33273523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 42434247 - 42434300
Alignment:
Q  43 aaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||  || |||||||| |||| |||||| ||||||||||||||||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaac 42434300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1352475 - 1352523
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 49  Q
    ||||||||||| |||||||| ||||   |||||||||||||||||||||    
T  1352475 ctattgctttggtttttgtgccaatcactcattttctttgtaaaatttt 1352523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 7667204 - 7667240
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaa 44  Q
    |||||||||||||||||||| | ||||||||||||||    
T  7667204 tttgatttttgtgtcaatatttaattttctttgtaaa 7667240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 28494953 - 28495041
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||| ||||||||||||||  | ||||||| |||||| || || || ||||||||||| | || |||||   |||||||||||||||||    
T  28494953 tttggtttttgtgtcaatacctaattttctgtgtaaatttatggttgtcacaaaagttgtaatttaaatggttgttcaaataacacaac 28495041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 31414999 - 31415091
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||| ||| ||||||||||||||| ||  ||||||| ||||||| || || || ||||||||||||   |||| | ||||||||||| |||||    
T  31414999 ttgcattggtttttgtgtcaatatctctctttctttttaaaattatggttgtctcaaaagttatcaataaaatgattgttcaaataatacaac 31415091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26207928 - 26208022
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  26207928 ctattgctttgatttta-tgtcaatacatcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaac 26208022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 18434882 - 18434976
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| ||||||||||||| ||||| ||||||||||||| ||||||||| || ||||||||||| ||||||||||| || |||||||||||||||    
T  18434882 tattgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaac 18434976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31827037 - 31827132
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||||||  ||||||| |||||||||||||| || |  |||||||| ||||||||||| ||||||||||||||||||    
T  31827037 ctattgatttggtttttgtgtcaataactcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaac 31827132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44519136 - 44519041
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||  ||||  |||||| ||||||||||||||| |||||||||||||| |||  || || |||||||||||||||||||    
T  44519136 ctattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaac 44519041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 50149032 - 50149127
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||||| |  |||||||| |||| ||||   ||||||||||||||||||    
T  50149032 ctattgctttggtttttgtgtcaatcaatcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaac 50149127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 45333798 - 45333891
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    |||||||||||||||||||||| ||  |||||| |||||||||||||| ||| |||||||| ||||||  || ||| |||||||||||||||||    
T  45333798 tattgctttgatttttgtgtcactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacacaa 45333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19947729 - 19947634
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||  |||||  || |||||||| |||||||||| || || |||||||| |||| |||||||||||||||||||||||||    
T  19947729 ctattgctttggtttttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaac 19947634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 26021061 - 26020970
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    |||||| ||||||| |||||||||||| || |||| ||||||||||||||||| || |||||| | |||| ||||| |||||||||||||||    
T  26021061 ctattgatttgattattgtgtcaatatctctttttttttgtaaaattttgattgtctcaaaagatgtcatataaatgaatgttcaaataaca 26020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30467518 - 30467423
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||| ||||||||| | || |||||||||||||| |||  || ||||||||||| |||| ||| || ||||||||||||||||||    
T  30467518 ctattgctttgatttgtgtgtcaatctctcgttttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaac 30467423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 30570610 - 30570705
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||||||||||||  ||||| ||  ||||||||||||||||||||| |  ||||| ||||||| ||||| |||||||||||||||||||    
T  30570610 ctattgttttgatttttgtgctaatatctcgatttctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaac 30570705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 51137625 - 51137547
Alignment:
Q  12 atttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataa 90  Q
    |||||| ||||||||| ||||| |||||||||||||||| ||||||||||  ||||||| ||||||||| |||||||||    
T  51137625 atttttatgtcaatatctcattctctttgtaaaattttgtttatcacaaatattatcatataaataaatattcaaataa 51137547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 21401491 - 21401579
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||| |  |||||||| |||  |||||  ||||||||||||||||||    
T  21401491 tttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaac 21401579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3982011 - 3981916
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| || |||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||  |  ||  ||||||||||||||||||    
T  3982011 ctattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaac 3981916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9566945 - 9566850
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||    ||||||| |||||||||||| || || |||||||| |||| ||| | |||||||||||||||||||    
T  9566945 ctattgctttggtttttgtgtcaataccctattttctatgtaaaattttggttgtctcaaaagttgtcatataattgaatgttcaaataacacaac 9566850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 25672440 - 25672523
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||| ||||||  |||||| |||| |||||    
T  25672440 tttttgtgtcaatactttattttctttgtaaaattttgattatatcaaaagttatcatataaatagttgttcagataatacaac 25672523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 33100894 - 33100989
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||||||||||||||| ||  |||||| |||| |||||||||| || ||||||||||| |||  || || |||||||||||||||||||    
T  33100894 ctattgttttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 33100989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 45640388 - 45640482
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||||| ||   ||||||||| |||  || ||| ||||||||||||||||||    
T  45640388 ctattgctttgatttttgtgccaatatctcattt-ctttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaac 45640482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 46907293 - 46907376
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| ||||||||||||| || |||||||| || | |||||  ||||||||||||||||||    
T  46907293 tttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaac 46907376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 48470725 - 48470820
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||| |||| |||||| |||||| |||||||||||||||||| ||||||||||| |||  || ||  ||||||||||||||||||    
T  48470725 ctattgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaac 48470820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 49065349 - 49065254
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||   ||| || |||| |||||| || |||||||||||||||    
T  49065349 ctattgctttggtttttgtgccaatacttcattttctttgtaaaattttggttatctttaaaattgtcatataaatagatattcaaataacacaac 49065254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 50932390 - 50932481
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||| || | ||||||||| |||  || ||  ||||||||||||||    
T  50932390 ctattgctttgatttttgtgtcaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 43775304 - 43775386
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||| |||  || || ||| ||||||||||||||    
T  43775304 tttttgtatcaatatctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaa 43775386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 35369786 - 35369879
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||||||||||||||||||||| ||  |||||| |||| |||||||||| || ||||||||||| |||  || ||  ||||||||||||||||    
T  35369786 ctattgctttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 649855 - 649950
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  ||  |  ||||||||||||||||||    
T  649855 ctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaac 649950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8846060 - 8846130
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgt--aaaattttgattatcacaaaagttatca 69  Q
    ||||||||||| |||||||||||||| ||| ||||||||||  |||||| ||||||||| |||||||||||    
T  8846060 ctattgctttggtttttgtgtcaatacatctttttctttgtaaaaaattatgattatcataaaagttatca 8846130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19055744 - 19055649
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| |||||||| |||||| |||||| ||||||||||||||  || ||||||||||| |||  || ||  ||||||||||||||||||    
T  19055744 ctattgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 19055649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26469445 - 26469540
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||| | ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  26469445 ctattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 26469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27465042 - 27464947
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  27465042 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 27464947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31088267 - 31088362
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  ||||||| |||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  31088267 ctattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 31088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37685415 - 37685506
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||||||||||||||||||||| ||  ||||||  ||||||||||||| ||| |||||||| ||||||  |  || |||||||||||||||    
T  37685415 ctattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataaca 37685506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37700103 - 37700012
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||||||||||||||||||||| ||  ||||||  ||||||||||||| ||| |||||||| ||||||  |  || |||||||||||||||    
T  37700103 ctattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataaca 37700012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 40328718 - 40328663
Alignment:
Q  37 tttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    |||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||    
T  40328718 tttgtaaaattttggttatatcaaaagttatcatctaaatagatgttcaaataaca 40328663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 50726233 - 50726138
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| ||||||||||||| || ||  |||||||||||| ||||||||| || |||||||| ||||||  || ||  ||||||||||||||||||    
T  50726233 ctattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaac 50726138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 6809668 - 6809757
Alignment:
Q  3 attgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    |||| |||||||||||||  ||| ||||||||||| | |||||||||| || || |||||||| |||| |||||  ||||||||||||||    
T  6809668 attgttttgatttttgtgctaatgtatcattttctatataaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 6809757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 51436658 - 51436601
Alignment:
Q  7 ctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagt 64  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||| || |||||||    
T  51436658 ctttgatttttgtgtcaatatctcgttttctttgtaaaactttgattctctcaaaagt 51436601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37275018 - 37274954
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||||||||| ||||||||||| ||  |||||| ||||| |||||||||||| |||||||||||    
T  37275018 ctattgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagtt 37274954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 52576287 - 52576191
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaat-aaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| |  ||  |||||| ||||||||||||||| || ||||||||||| ||| ||| || || |||||||||||||||||    
T  52576287 ctattgctttggtttttgtgccggtacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaac 52576191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 45121465 - 45121371
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  45121465 ctattgctttggtttttgtgccactac-tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 45121371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6693243 - 6693301
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    |||||| |||| ||||| ||||||||  |||||| ||||||||||||||||||||||||    
T  6693243 ctattgttttggtttttatgtcaatacctcatttcctttgtaaaattttgattatcaca 6693301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 2571732 - 2571817
Alignment:
Q  12 atttttgtgtcaatatatcattttctttg-taaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||| ||  |||||||||||| |||||||||| || ||||||||||| |||| |  ||  ||||||||||||||||||    
T  2571732 atttttgtgtcactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaac 2571817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29359723 - 29359772
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 50  Q
    ||||||||||| |||||||| || || |||||||||||||||||||||||    
T  29359723 ctattgctttggtttttgtgccattacatcattttctttgtaaaattttg 29359772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50775141 - 50775080
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaa 62  Q
    ||||||||||| |||||||||||| | ||| |||||||||||||||| || || ||||||||    
T  50775141 ctattgctttggtttttgtgtcaacacatctttttctttgtaaaattatggttgtcacaaaa 50775080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15083035 - 15082983
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgatt 53  Q
    ||||||||||| ||||||||||||||  |||||| |||||||||| |||||||    
T  15083035 ctattgctttggtttttgtgtcaatacttcatttcctttgtaaaagtttgatt 15082983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 27533468 - 27533420
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 50  Q
    ||||| |||||||||| ||||||||  ||||||||||||||||||||||    
T  27533468 tattgttttgatttttatgtcaatacctcattttctttgtaaaattttg 27533420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9988038 - 9988133
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||| ||||   ||||||| |||||||||||||| || |  |||| ||| | || ||||   ||||||||||||||||||    
T  9988038 ctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgttgcaaaggttgtaatataaaatgatgttcaaataacacaac 9988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18512328 - 18512233
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||  ||||| ||||||||  ||||||||||| |||||||||  || ||  |||| ||||||| |||||  ||||| ||||||||||||    
T  18512328 ctattgctttagtttttatgtcaatacctcattttctttataaaattttagttgtcttaaaaattatcatataaattgatgttgaaataacacaac 18512233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37619630 - 37619721
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||||| |||||||||||| |||||  |||||| ||||||||||||||| || | | ||||||| |||  || ||  ||||||||||||||    
T  37619630 ctattgcgttgatttttgtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataaca 37619721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 51571331 - 51571236
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||  || |||||||||||||||| || || || ||||| || |||   ||||   |||||||||||||||||    
T  51571331 ctattgctttggtttttgtgtcaatacctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggttgttcaaataacacaac 51571236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 48103318 - 48103252
Alignment:
Q  31 attttctttgtaaaattttgattatcacaaaagttatcatctaaataaatg-ttcaaataacacaac 96  Q
    |||||||||||||||||||| || || |||||||| |||| |||||| ||| |||||||| ||||||    
T  48103318 attttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaac 48103252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 2269555 - 2269462
Alignment:
Q  3 attgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||| ||||||||||||||  | |||||||   |||||||||| || |  |||||||| |||| ||| | ||| |||||||||||||||    
T  2269555 attgctttggtttttgtgtcaataccttattttctaaataaaattttggttgtatcaaaagttgtcatataattgaatattcaaataacacaac 2269462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 8447854 - 8447914
Alignment:
Q  32 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 93  Q
    ||||||||||||| || ||||| ||||| ||||||||| |||||| | ||||||||||||||    
T  8447854 ttttctttgtaaa-ttatgattgtcacataagttatcaactaaatgattgttcaaataacac 8447914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 44517939 - 44517878
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatca 69  Q
    ||||||||||||||||||| ||  ||||||||||||| || |  ||||| ||||||||||||    
T  44517939 tttgatttttgtgtcaatacatatttttctttgtaaatttatagttatcccaaaagttatca 44517878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44914557 - 44914496
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaa 62  Q
    ||||||||||  ||||||||||| ||  |||||| |||||||||||||||||| || |||||    
T  44914557 ctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcgcaaaa 44914496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 51718604 - 51718547
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    |||||||||||||||| ||  |||||| ||||||||| ||||  ||||||||||||||    
T  51718604 tttgatttttgtgtcactacttcatttcctttgtaaagttttagttatcacaaaagtt 51718547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23645497 - 23645561
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    |||||| |||| |||||||| || ||  |||||| ||||||||||||||| || |||||||||||    
T  23645497 ctattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagtt 23645561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26208218 - 26208120
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatc---taaataaatgttcaaataacacaac 96  Q
    |||||| |||||||||||||||||||  || |||||||| ||||||| |  ||||| ||||  |||| |||   ||||||  |||||||||||||||||    
T  26208218 ctattgttttgatttttgtgtcaatacttctttttctttataaaattatagttatcccaaatattattatcaattaaatagttgttcaaataacacaac 26208120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 37186948 - 37187023
Alignment:
Q  17 tgtgtcaatatatcattttctttgtaaaattttgattatca-caaaagttatcatctaaataaatgttcaaataaca 92  Q
    ||||||||||  ||||||||||| ||||||||||  ||||| |||||||||| ||  |||||| |||||||||||||    
T  37186948 tgtgtcaatacctcattttctttataaaattttg-gtatcatcaaaagttattattaaaataattgttcaaataaca 37187023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24614301 - 24614206
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  |||||| ||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||    
T  24614301 ctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaac 24614206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31445404 - 31445499
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| |  ||||| ||||||| ||||   ||||||||||||||||||    
T  31445404 ctattgctttgatttttgtgtcaatcactcattttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaac 31445499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35072347 - 35072252
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||| || |  |||||||| |||| |||||  ||||||| ||||||||||    
T  35072347 ctattgctttgatttttgtgtcaatgtctcattttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacacaac 35072252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40417860 - 40417955
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||| ||||||||  ||| |||||||||||||||||| || || |||||||| || | |||||| ||||||||||||||||||    
T  40417860 ctattgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaac 40417955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41189528 - 41189431
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttat--catctaaataaatgttcaaataacacaac 96  Q
    ||||||||||  ||||||||||||||  |||||| |||||||||||||||||| ||| |||||||||  ||| || || |||||||||||||||||||    
T  41189528 ctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaac 41189431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 9428530 - 9428597
Alignment:
Q  29 tcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| | ||||||||||||||  ||| |||||||| |||||||||||||||||||||||||    
T  9428530 tcattttctttattaaattttgattatctaaaatgttatcatataaataaatgttcaaataacacaac 9428597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35098688 - 35098593
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||||| | ||||||||| | |||||||||| || |  |||||||| |||| |||||  || |||||||||||||||    
T  35098688 ctattgctttgatttttgtgtcaatgtctcattttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacacaac 35098593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 46022240 - 46022157
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  46022240 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 46022157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 7701642 - 7701725
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| ||||| |||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  7701642 tttttgtgtcaatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 7701725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 35207587 - 35207679
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||||| || || ||||  ||||| | |||||  |||||||||||||||||    
T  35207587 ctattgctttgatatttgtgtcaatacttcattttatttgtaaaattttggttgtctcaaa--ttatcctataaatggatgttcaaataacacaa 35207679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38956603 - 38956508
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  38956603 ctattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 38956508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 48062143 - 48062238
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||| || ||||| ||||||   |||   ||||||||||||||||||    
T  48062143 ctattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaac 48062238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30064525 - 30064587
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaag 63  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||||| ||| || ||||||    
T  30064525 ctattgctttgattttcatgtcaatacatcattttctttgtaaaattttaattgtctcaaaag 30064587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 35628004 - 35627910
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| ||||||||||||||  || |||||||| ||||||| || ||||| ||||||||||||   | |||  |||||||||||||||||    
T  35628004 tattgctttggtttttgtgtcaatacctctttttctttataaaattatggttatctcaaaagttatcaatcagatagttgttcaaataacacaac 35627910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 47391309 - 47391215
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| |||||||||||||||||||| |||||| |||| |||||| |||||| ||  ||||||||| |  || || ||||||||| |||||||||    
T  47391309 tattgttttgatttttgtgtcaatatttcatttcctttataaaatattgattgtcttaaaagttattacatatatgaatgttcaactaacacaac 47391215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4292514 - 4292607
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgt-aaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 93  Q
    |||||||||||||||||||  |||||| | ||||||||||| |||||||| |||||| |||||||| ||||  ||||  ||||| |||||||||    
T  4292514 ctattgctttgatttttgtaccaatatttaattttctttgtaaaaattttaattatctcaaaagttgtcatgaaaatggatgtttaaataacac 4292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 38944913 - 38944978
Alignment:
Q  31 attttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||| ||  ||||||| |||| ||||| |||||| ||||||||||||    
T  38944913 attttctttgtaaaattttgattgtcttaaaagttgtcatataaatgaatgtttaaataacacaac 38944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36352569 - 36352525
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    |||||||||||||||| |||||||||||| |||||||||||||||    
T  36352569 ctattgctttgattttcgtgtcaatatatgattttctttgtaaaa 36352525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25192902 - 25192807
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||| ||  |||||||||||||||||||||  || ||||||||||| |||  |  || ||| |||||||||||||||    
T  25192902 ctattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaac 25192807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39110951 - 39111044
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||| ||||||||  |||||||| ||||||| || ||||| || || ||||| ||||  |||||| |||||||||||||||||    
T  39110951 ctattgctttgattttt-tgtcaatacttcattttcattgtaaa-ttatgattgtctcataagttgtcattaaaataattgttcaaataacacaac 39111044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41018750 - 41018845
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| ||||| ||||||||| ||||  || ||||||||||||| || ||||| ||| ||||||| ||| |||||||  | |||||||||||||||    
T  41018750 ctattactttggtttttgtgttaatacctctttttctttgtaaatttatgattgtcataaaagttgtcacctaaatagttattcaaataacacaac 41018845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 41863613 - 41863538
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaata 77  Q
    |||||||||| |||||||| |||||  ||||||| ||||||||||||||||| ||  ||||||| |||| ||||||    
T  41863613 tattgctttgttttttgtgccaatacctcattttatttgtaaaattttgattgtcttaaaagttgtcatataaata 41863538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43025426 - 43025521
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||| |||||| ||||||||||||||  || | ||||||||| |||  || ||| |||||| |||||||||||    
T  43025426 ctattgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaac 43025521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 44649307 - 44649221
Alignment:
Q  7 ctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 93  Q
    ||||| ||||||||||||||| | ||||||||| |||||||||  || || |||||||| ||||  ||||| ||||| |||||||||    
T  44649307 ctttggtttttgtgtcaatatttaattttctttataaaattttagttgtctcaaaagttgtcatgaaaatagatgtttaaataacac 44649221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 6522250 - 6522163
Alignment:
Q  12 atttttgtgtcaatatatcattttctttgtaaaattttga---ttatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||  ||||||| |||||||||||||||   || | | |||| ||||||| ||||| | |||||||||||||||||    
T  6522250 atttttgtgtcaatacttcattttttttgtaaaattttgatcttttttaaaaaaattatcatataaatgattgttcaaataacacaac 6522163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 41989726 - 41989630
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttcttt--gtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| |||||||| || ||  ||||||| |||  ||||||||||| || |||||||||||||||  || ||  ||||||||||||||||||    
T  41989726 tattgctttggtttttgtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaac 41989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22918154 - 22918090
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||||||||| |||||||| || ||  |||||| |||||||||||||||||| || ||||||||    
T  22918154 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagtt 22918090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 22925268 - 22925220
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 50  Q
    ||||||||| |||||||||||||||| | |||||| |||||||||||||    
T  22925268 tattgctttaatttttgtgtcaatatcttattttccttgtaaaattttg 22925220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38259148 - 38259244
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttc-tttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||||||||||||||||||  || ||||| ||| |||| || ||||||||| |||||||||||  |||||   | |||||||||||||||    
T  38259148 ctattgttttgatttttgtgtcaatacctctttttcttttataaatttatgattatcataaaagttatcaattaaattgttattcaaataacacaac 38259244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41430136 - 41430092
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||    
T  41430136 ctattgctttggttttcgtgtcaatatatgattttctttgtaaaa 41430092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44189295 - 44189227
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatca 69  Q
    ||||| ||||| ||||||||||| ||  |||||| ||||| ||| |||||||| |||||||||||||||    
T  44189295 ctattactttggtttttgtgtcactaactcatttcctttgaaaatttttgattgtcacaaaagttatca 44189227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44895557 - 44895493
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || |||||||||||    
T  44895557 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagtt 44895493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3937108 - 3937013
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| ||||| |||||||| |||||  |||||| |||| |||||||||| || ||||||||||| |||  |  ||  ||||||||||||||||||    
T  3937108 ctattactttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaac 3937013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 42552991 - 42553078
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    |||| |||||||| |||||  || |||||||||||||||| || || || ||||||||||||  |||||   ||||||||||||||||    
T  42552991 tttggtttttgtgccaatacctctttttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataacacaa 42553078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 43942746 - 43942813
Alignment:
Q  29 tcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||| ||  ||||||| ||||||  || ||  ||||||||||||||||||    
T  43942746 tcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaac 43942813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 32529840 - 32529746
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| ||||| | ||| ||  |||||| |||||||||||||||||| |||||||| || |||  || ||  ||| ||||||||||||||    
T  32529840 tattgctttggtttttttatcactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaac 32529746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38073306 - 38073364
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    ||||||||||| |||||||| |||||  |||||| ||||||||||||||| || |||||    
T  38073306 ctattgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgtcaca 38073364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 38347660 - 38347726
Alignment:
Q  31 attttctttgtaaaattttgattatcac-aaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||||| | |||| |||| |  |||||  ||||||||||||||||||    
T  38347660 attttctttgtaaaattttgattatctcaaaaaattattagataaatgtatgttcaaataacacaac 38347726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 11326001 - 11326053
Alignment:
Q  15 tttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttat 67  Q
    ||||||||||||| || |||||||||||||||| | ||| || ||||||||||    
T  11326001 tttgtgtcaatatctctttttctttgtaaaattataattgtctcaaaagttat 11326053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 32803788 - 32803872
Alignment:
Q  14 ttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaacat 98  Q
    |||| ||||||||  | ||||| | ||||||||||| ||| |  |||||||| |||| |||||  ||||||||||||||||||||    
T  32803788 ttttatgtcaatactttattttttatgtaaaattttaattgtttcaaaagttgtcatataaatggatgttcaaataacacaacat 32803872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35822959 - 35822915
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||    
T  35822959 ctattgctttgatttttgtgccaatacatatttttctttgtaaaa 35822915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42584889 - 42584933
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    |||||||||||||| | ||||||||| || |||||||||||||||    
T  42584889 ctattgctttgattctcgtgtcaatagatgattttctttgtaaaa 42584933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38376475 - 38376380
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| |||||||||||||| || ||| ||||||||||||||||||||||||| |||||||| ||||||  || ||| ||||||||||||||||||    
T  38376475 ctattactttgatttttgtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaac 38376380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 39195144 - 39195238
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||| ||| |||| |||| | ||||||||||||||||| ||||||||||||||| ||| |||| |||||| ||||||||||||||||||    
T  39195144 tattgctttggtttgtgtgccaatctctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaac 39195238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2575775 - 2575680
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||| ||||||||| | ||||||||||||||||| |||  || ||||||||||| |||| |||||| ||||||||||||||||||    
T  2575775 ctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaac 2575680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 34616659 - 34616742
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||| ||||||||||| |||||||||| || || |||||||| |||| |||||| ||||||||||||||||||    
T  34616659 tttttgtgtcaatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaac 34616742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39440570 - 39440665
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||| ||  |||||| |||| ||||||||||||| ||||||||||| |||  || || |||||||||||||||||||    
T  39440570 ctattgctttgatttttgtgtcactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 39440665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39654910 - 39655005
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||||||||  |||||||||||||||| || || || ||  |||| ||||||||||||||  |||||||||||||||||    
T  39654910 ctattgctttgatttttgtgtcaatacctcattttctttgtaaatttatggttgtcttaaaaattatcatctaaatagttgttcaaataacacaac 39655005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37997340 - 37997433
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| || | |||||| ||||||  || ||| ||||||||||| ||||    
T  37997340 ctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcaca 37997433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 27051070 - 27050978
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||  |  || |||||||||||||||||    
T  27051070 tattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacaca 27050978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 29175314 - 29175406
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||| ||||||||||||||  |||||| ||||||||||||||| || ||||||||||| |||  || || |||||||||||||||||||    
T  29175314 ttgctttggtttttgtgtcaatagctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 29175406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 19473934 - 19473847
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||| || |||||||| |||| |||||  || ||||||||||||||    
T  19473934 tttggtttttgtgtcaatacttcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaa 19473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43175070 - 43175165
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||| |||||| ||||||||||| ||  |||||| |||||||||||||||||||||||||||||| |||  || ||  ||||||||||||||||||    
T  43175070 ctatggctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaac 43175165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 42396022 - 42395928
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||||||||||||  ||||  ||||||| ||||||||| ||| |||||| ||||| ||||||| ||| || |||||||||||||||||    
T  42396022 ctattgctttgatttttgtgcaaatacctcattttttttgtaaaactttaattatctcaaaaattatcatataagtagatgttcaaataacacaa 42395928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11672108 - 11672015
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||||||||||||||||||||||||  | ||||||||| ||||||||| | | ||||||||||| | || |||||| || |||||||||||||    
T  11672108 ctattgctttgatttttgtgtcaataatttattttctttataaaattttaagtgtcacaaaagttgtaatataaatagattttcaaataacaca 11672015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 31641548 - 31641455
Alignment:
Q  3 attgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||||| ||  | |||| |||| |||||||||| || |||||||||||||||  || || |||||||||||||||||||    
T  31641548 attgctttgatttttgtgtcactaccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaac 31641455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 21777459 - 21777547
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||| |||||| ||| |||||||| |||||| |||||||||  |||| ||||||| ||||||| |||| ||||||||||||    
T  21777459 tttgatttttgtatcaatacatctttttctttataaaatcttgattatctaaaaaattatcatataaataattgtttaaataacacaac 21777547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 39478524 - 39478592
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcat 70  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||| ||||    
T  39478524 tattactttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcat 39478592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26492093 - 26492188
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| |||||||||||||||||| |||||||| || |||  || ||| ||||||||||||||||||    
T  26492093 ctattgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaac 26492188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 38382419 - 38382502
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  38382419 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 38382502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42853663 - 42853758
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||  ||||||||||| ||||||||||||| || ||||| || |||   ||||  ||||||||||||||||||    
T  42853663 ctattgctttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaac 42853758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44539820 - 44539915
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || || |||||||||||||||||||    
T  44539820 ctattgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 44539915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 47181939 - 47182022
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  47181939 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 47182022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 48402170 - 48402087
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  48402170 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 48402087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 53801744 - 53801649
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||  ||||||||||||||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  53801744 ctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 53801649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11068774 - 11068868
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||||||||||||||| |   |||||| ||||||||||||||| ||  |||||||||| |||  || || ||||||||||||||||||    
T  11068774 ctattgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaa 11068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24575836 - 24575742
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||| |||||||| |||||  |||||| |||| |||||||||| || ||||||||||| |||  || ||| |||||||||||||||||    
T  24575836 ctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 56364017 - 56363935
Alignment:
Q  14 ttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaac 56363935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40348880 - 40348944
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||||||||| ||||||||||| ||| |||||||||||  |||||||||||| |||||||||||    
T  40348880 ctattgctttggtttttgtgtcactatctcattttctttaaaaaattttgattgtcacaaaagtt 40348944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 46038752 - 46038841
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    |||||||| |||||||  |||||  |||||||||||||||| || ||||||||| ||||||| |||  ||||||| ||||||||||||||||    
T  46038752 ttgctttggtttttgtaacaatacctcattttctttgtaaatttatgattatcataaaagttgtca--taaataattgttcaaataacacaa 46038841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 515618 - 515535
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||   |||||||||| |||| || |||||||  |||||||| |||| ||||||||| |||||||||||||||    
T  515618 tttttgtgtcaataccacattttctttataaatttatgattatttcaaaagttgtcatataaataaatattcaaataacacaac 515535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21775327 - 21775232
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||| ||||||||||| |||||||| || |||| || ||||| |||||||| || ||||| |||||| | ||| |||||||||||    
T  21775327 ctattgctttggtttctgtgtcaatatttcattttccttataaatttatgattgtcacaaaaattgtcatccaaataattattctaataacacaac 21775232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26732311 - 26732406
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| |||||||| || ||  |||||||||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  26732311 ctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 26732406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36177992 - 36178087
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||  || ||  |||||| |||| |||||||||  || |||||||||||||||  || ||||||||||||||||||||||    
T  36177992 ctattgctttggtttttgtaccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaac 36178087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 56474752 - 56474657
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||||||  |||||||||||||||| ||||| || || ||||| || | || | |||| ||||||||||||||||||    
T  56474752 ctattgttttggtttttgtgtcaatacctcattttctttgtaaagttttggttgtctcaaaaattgttatgtgaatagatgttcaaataacacaac 56474657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10250500 - 10250406
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 95  Q
    ||||||||||| |||||||| || ||  |||||||||||||||||||||| || ||||||||||| ||   || ||  |||||||||||||||||    
T  10250500 ctattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaa 10250406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35897787 - 35897874
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaata 89  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||| | | || || ||||||||||||| |||||   ||||||||||    
T  35897787 ctattgctttgatttttgtgtcaatacttcattttcattgtaaaatatag-ttgtcccaaaagttatcatataaatggttgttcaaata 35897874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50608609 - 50608561
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 49  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||    
T  50608609 ctattactttgatttttgtgtcaatatctcatttcctttgtaaaatttt 50608561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 3316471 - 3316546
Alignment:
Q  32 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaat-aacacaaca-tatataga 105  Q
    |||| ||||||||||||||||| || |||||||| ||||||||||  |||||||||| ||||||||| ||||||||    
T  3316471 ttttttttgtaaaattttgattgtctcaaaagttgtcatctaaatggatgttcaaataaacacaacactatataga 3316546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7632446 - 7632351
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||| ||||   ||||||| |||||||||||||| || |  |||| ||| |||| ||||   ||||||||||||||||||    
T  7632446 ctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgttgcaaaggttgtcatataaaatgatgttcaaataacacaac 7632351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10474097 - 10474010
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaat 88  Q
    ||||| ||||||||||||||||||||  || ||||||||||||| || || || ||| ||||||| | |||||||| | |||||||||    
T  10474097 ctattactttgatttttgtgtcaatacttctttttctttgtaaatttatggttgtcataaaagttgtaatctaaatgagtgttcaaat 10474010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23369317 - 23369222
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| |||||||| |||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  23369317 ctattgctttggtttttgtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 23369222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26724957 - 26724862
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||| ||||||||||| ||  |||||| ||||||||||||||  || | |||||||||||||  || ||  ||||||||||||||||||    
T  26724957 ctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaac 26724862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 37297135 - 37297229
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||| ||  |||||| ||| ||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  37297135 ctattgctttggtttttgtgtcactacctcatttcctt-gtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaac 37297229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 50831740 - 50831645
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||||||||||| |  || |||||||||||||||| || || || |||||||| |||   ||||   |||||||||||||||||    
T  50831740 ctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaac 50831645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 51986128 - 51986223
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||| ||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  51986128 ctatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 51986223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2268492 - 2268434
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    |||||| |||| ||||||||||||||| |||||| ||||||||||||||| || |||||    
T  2268492 ctattgttttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcaca 2268434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 1627540 - 1627445
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatc---acaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||| |||||||| |||||  |||||||||||||||| || || || ||   ||||||||| ||||| |||||  |||||||||||||||||    
T  1627540 ttgctttggtttttgtgccaatacctcattttctttgtaaatttatggttgtcacaacaaaagttgtcatccaaatagttgttcaaataacacaac 1627445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 38134439 - 38134528
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataa 90  Q
    |||||| |||| ||||||||||| |   |||||| ||||||||||||||| |||||||||||||| |||  |  || |||||||||||||    
T  38134439 ctattgttttggtttttgtgtcactgcctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31574924 - 31574880
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 45  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  31574924 ctattgctttgatttttgtatcaatacatgattttctttgtaaaa 31574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 39447848 - 39447888
Alignment:
Q  16 ttgtgtcaatatatcattttctttgtaaaattttgattatc 56  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  39447848 ttgtgtcaatacctcattttctttgtaaaattttgattatc 39447888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5622544 - 5622639
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||  | ||  |||||| ||||||||||||||  |||||||||||||| | |  || ||| || |||||||||||||||    
T  5622544 ctattgctttggtttttgtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaac 5622639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32130224 - 32130145
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaat 80  Q
    ||||| |||| |||||||| |||||| ||||||||||||||| ||||||| || |  ||||||||  ||| |||||||||    
T  32130224 ctatttctttaatttttgtatcaatacatcattttctttgtataattttggttgtttcaaaagttgacatataaataaat 32130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 50721725 - 50721634
Alignment:
Q  5 tgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||| |||||||||||||   |||||||||||||||||||||  || |  |||| ||| |||| ||||   ||||||||||||||||||    
T  50721725 tgctttggtttttgtgtcaatcactcattttctttgtaaaattttagttgttgcaaaggttgtcatataaaatgatgttcaaataacacaac 50721634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 12387649 - 12387607
Alignment:
Q  2 tattgctttgatttttgtgtcaatatatcattttctttgtaaa 44  Q
    ||||| |||||||||||||||||||  ||||||||||||||||    
T  12387649 tattgttttgatttttgtgtcaatacctcattttctttgtaaa 12387607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 19748752 - 19748814
Alignment:
Q  32 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||||||||||| || ||||| |  |||||||||||| | |||||| |||||||||||||||    
T  19748752 ttttctttgtaaatttatgattgtttcaaaagttatcaccaaaataattgttcaaataacaca 19748814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 19791054 - 19790992
Alignment:
Q  32 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 94  Q
    ||||||||||||| || ||||| |  |||||||||||| | |||||| |||||||||||||||    
T  19791054 ttttctttgtaaatttatgattgtttcaaaagttatcaccaaaataattgttcaaataacaca 19790992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 38510726 - 38510663
Alignment:
Q  31 attttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||| |||| ||||||||||||| |||||||| ||||||  || ||||||||| ||||||||||||    
T  38510726 atttcctttataaaattttgattgtcacaaaaattatca--tatataaatgttgaaataacacaac 38510663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 39606079 - 39606153
Alignment:
Q  22 caatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||| |||||| |||| |||||||||| |||||  ||||||| |||  || |||||||||||||||| |||||    
T  39606079 caatatttcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataatacaac 39606153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 5233621 - 5233560
Alignment:
Q  35 tctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||||| |  |||||||| | |  |||||| ||||||||||||||||||    
T  5233621 tctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaac 5233560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 31090686 - 31090593
Alignment:
Q  3 attgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||| |||||||||||||||||| | || |||||||| ||||||||| ||| ||   ||| ||||||| |||||  ||||| ||||| ||||||    
T  31090686 attgttttgatttttgtgtcaatgtctcgttttctttttaaaattttaattgtcttcaaaattatcatataaatggatgtttaaatatcacaac 31090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 47744467 - 47744402
Alignment:
Q  32 ttttctttgtaaaattttgattatcacaaaagttatc-atctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||| || || || ||||||||||| ||| |||||  |||||||||||||||||    
T  47744467 ttttctttgtaaaattatggttgtcccaaaagttatcaatcaaaatagttgttcaaataacacaac 47744402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 31995888 - 31995836
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 65  Q
    ||||||||||||||  ||||||||||| ||||||||| ||| || ||||||||    
T  31995888 tttttgtgtcaatacctcattttctttctaaaattttaattgtctcaaaagtt 31995836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46634186 - 46634234
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 49  Q
    ||||| ||||||||||||||||| ||  |||||| ||||||||||||||    
T  46634186 ctattactttgatttttgtgtcactacctcatttcctttgtaaaatttt 46634234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49449148 - 49449096
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgatt 53  Q
    |||||| |||| ||||||||  ||||  |||||||||||||||||||||||||    
T  49449148 ctattgttttggtttttgtgctaatacctcattttctttgtaaaattttgatt 49449096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52895314 - 52895358
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatat-cattttctttgtaaa 44  Q
    |||||||||||||||| |||||||||| | |||||||||||||||    
T  52895314 ctattgctttgattttcgtgtcaatatctacattttctttgtaaa 52895358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20886 - 20791
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||||| |  ||||| || |||||| ||| ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||    
T  20886 ctattgctttgatttttctaccaatacataattttccttgcaaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaac 20791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11868 - 11963
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||| |  ||||||||||| |||| |  ||| |||||||||||| |||||    
T  11868 ctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaac 11963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 53334 - 53251
Alignment:
Q  13 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||||||| ||||||||||| |||| ||||| || ||  |||| ||||||| |||||||||||||||||||||||||    
T  53334 tttttgtgtcaatatctcattttctttataaatttttggttgtctaaaaacttatcatataaataaatgttcaaataacacaac 53251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 24519 - 24439
Alignment:
Q  5 tgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttca 85  Q
    |||||||  |||||||||||||| ||||||| ||| |||| |||||||| ||  |||| | ||||| ||||||||| ||||    
T  24519 tgctttggattttgtgtcaatatctcattttttttataaacttttgattgtctaaaaaataatcatataaataaatattca 24439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35609 - 35667
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 59  Q
    ||||||||||| ||||||||||| ||  ||||||||||||||||||||||||| |||||    
T  35609 ctattgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcaca 35667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 8757 - 8849
Alignment:
Q  4 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||| ||||||||||| ||  |||||| ||||||||||||||| || ||| ||||||| |||  || ||  ||||||||||||||||||    
T  8757 ttgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaac 8849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 49388 - 49472
Alignment:
Q  8 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 92  Q
    |||| ||||||||||| ||  |||||| ||||||||||||||| |||||||||||||| |||  || ||  ||||||||||||||    
T  49388 tttggtttttgtgtcactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataaca 49472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 76604 - 76509
Alignment:
Q  1 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    ||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||| ||||||||||||    
T  76604 ctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaac 76509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 71542 - 71478
Alignment:
Q  32 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 96  Q
    |||||||||||||||| | ||| |  ||||||||||||   |||||| |||||||||||||||||    
T  71542 ttttctttgtaaaattataattttatcaaaagttatcaaacaaataattgttcaaataacacaac 71478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University