View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11705_low_17 (Length: 241)
Name: NF11705_low_17
Description: NF11705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11705_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 41 - 223
Target Start/End: Complemental strand, 37879744 - 37879562
Alignment:
| Q |
41 |
ttgacgatgtttggacggacatcgtcgctgatggtggtgcaaaccatcttcatcatcaacaacattatcatcatccttcttctgatgaaggtttttctgc |
140 |
Q |
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| T |
37879744 |
ttgacgatgtttggacggacatcgtcgctgatggtggtgcaaaccatcttcatcatcaacaacattatcatcatccttcttctgatgaaggtttttctgc |
37879645 |
T |
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| Q |
141 |
ttgcggtgccggtggtggtgatgaagttactcttgaagatttcttggtgaaagctggtgctgttccttaccctcataatcaat |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37879644 |
ttgcggtgccggtggtggtgatgaagttactcttgaagatttcttggtgaaagctggtgctgttccttaccctcatcatcaat |
37879562 |
T |
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