View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11705_low_19 (Length: 222)
Name: NF11705_low_19
Description: NF11705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11705_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 50214358 - 50214571
Alignment:
| Q |
7 |
caatgagatggacatcaagtctagtaacaatttacataagggctagttctatatgctttgctacacatcgtatatcaatttcagagcattcaatttcaat |
106 |
Q |
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|||| |||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50214358 |
caattagatagacagcaagtctagtaacaatttacataagggctagttcaatatgctttgctacacatcgtatatcaatttcagagcattcaatttcaat |
50214457 |
T |
|
| Q |
107 |
tctctcttctaaaactccattgttgcaacaagtattatatcagagatatatattattcatggtcacttaatataacaaacccgcacttcaattttacctt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50214458 |
tctctcttctaaaactccattgttgcaacaagtattatatcagagatatatattattcatggtcacttaatataacaaacccgcacttcaattttacctt |
50214557 |
T |
|
| Q |
207 |
tgcttctccactag |
220 |
Q |
| |
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| |||| |||||| |
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| T |
50214558 |
tatttctgcactag |
50214571 |
T |
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