View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11705_low_3 (Length: 598)

Name: NF11705_low_3
Description: NF11705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11705_low_3
NF11705_low_3
[»] chr5 (34 HSPs)
chr5 (367-579)||(34820783-34821010)
chr5 (178-299)||(10069969-10070088)
chr5 (183-299)||(35132522-35132637)
chr5 (164-296)||(19647708-19647841)
chr5 (182-299)||(34650903-34651018)
chr5 (182-299)||(13470151-13470267)
chr5 (182-299)||(13661808-13661924)
chr5 (184-299)||(35504312-35504426)
chr5 (182-299)||(21547464-21547579)
chr5 (182-299)||(12506296-12506412)
chr5 (175-299)||(6283562-6283686)
chr5 (182-299)||(8787339-8787455)
chr5 (182-299)||(11958037-11958153)
chr5 (175-270)||(9721669-9721765)
chr5 (182-270)||(31909659-31909747)
chr5 (178-265)||(40564470-40564557)
chr5 (186-299)||(4837258-4837369)
chr5 (190-299)||(10054430-10054538)
chr5 (175-298)||(20175228-20175351)
chr5 (190-264)||(11846106-11846180)
chr5 (190-298)||(2619635-2619742)
chr5 (183-274)||(40057331-40057422)
chr5 (175-271)||(19436900-19436995)
chr5 (209-299)||(39069381-39069469)
chr5 (187-271)||(39067010-39067095)
chr5 (201-271)||(6284822-6284892)
chr5 (182-275)||(10955974-10956067)
chr5 (182-240)||(4268620-4268677)
chr5 (207-299)||(21944954-21945047)
chr5 (207-274)||(6042142-6042210)
chr5 (197-299)||(40608619-40608722)
chr5 (207-299)||(39234831-39234923)
chr5 (178-247)||(25731440-25731508)
chr5 (203-251)||(22973732-22973780)
[»] chr8 (53 HSPs)
chr8 (182-299)||(27988569-27988685)
chr8 (182-299)||(28045871-28045987)
chr8 (182-299)||(168466-168582)
chr8 (175-299)||(11112639-11112763)
chr8 (182-299)||(34228682-34228798)
chr8 (178-299)||(4648195-4648314)
chr8 (182-272)||(33357199-33357289)
chr8 (182-298)||(16888614-16888728)
chr8 (182-299)||(30675642-30675758)
chr8 (182-299)||(16785087-16785202)
chr8 (175-296)||(29444202-29444323)
chr8 (182-299)||(4537814-4537930)
chr8 (182-271)||(36730471-36730560)
chr8 (175-299)||(43119217-43119341)
chr8 (178-277)||(28626789-28626888)
chr8 (175-299)||(9063114-9063237)
chr8 (175-272)||(42035043-42035141)
chr8 (175-296)||(13643015-13643135)
chr8 (175-296)||(13743440-13743560)
chr8 (182-275)||(16890550-16890643)
chr8 (182-298)||(21595848-21595962)
chr8 (182-265)||(7304588-7304671)
chr8 (182-297)||(20831623-20831737)
chr8 (182-268)||(32113938-32114024)
chr8 (175-299)||(37373206-37373329)
chr8 (178-270)||(9537890-9537982)
chr8 (175-273)||(40831302-40831401)
chr8 (182-299)||(12203855-12203970)
chr8 (182-299)||(12448283-12448398)
chr8 (182-271)||(2805330-2805419)
chr8 (182-275)||(9253972-9254064)
chr8 (182-299)||(16394131-16394247)
chr8 (193-299)||(9278212-9278317)
chr8 (182-274)||(3930303-3930395)
chr8 (189-264)||(34192809-34192884)
chr8 (193-296)||(10618021-10618123)
chr8 (175-269)||(42433606-42433700)
chr8 (182-268)||(10870382-10870468)
chr8 (189-299)||(29235235-29235344)
chr8 (182-271)||(17467630-17467719)
chr8 (221-299)||(12652630-12652707)
chr8 (182-274)||(22956730-22956821)
chr8 (189-247)||(22451835-22451892)
chr8 (182-235)||(39406905-39406958)
chr8 (187-244)||(30933397-30933453)
chr8 (189-268)||(33124570-33124650)
chr8 (182-226)||(24843349-24843393)
chr8 (231-273)||(36923782-36923824)
chr8 (175-299)||(39751533-39751658)
chr8 (231-298)||(30933451-30933517)
chr8 (233-275)||(35695569-35695611)
chr8 (201-254)||(34890647-34890700)
chr8 (201-299)||(4811557-4811656)
[»] chr2 (49 HSPs)
chr2 (182-299)||(31438646-31438762)
chr2 (182-299)||(561588-561704)
chr2 (182-299)||(20552931-20553047)
chr2 (173-299)||(32860102-32860228)
chr2 (178-299)||(38296178-38296297)
chr2 (178-299)||(43637165-43637284)
chr2 (182-299)||(31390012-31390128)
chr2 (183-271)||(2898098-2898186)
chr2 (182-272)||(4381821-4381911)
chr2 (175-299)||(34442594-34442717)
chr2 (182-299)||(6580189-6580305)
chr2 (182-299)||(22887750-22887866)
chr2 (182-275)||(30486233-30486326)
chr2 (182-299)||(44587902-44588018)
chr2 (175-266)||(26387126-26387218)
chr2 (165-299)||(26891714-26891849)
chr2 (182-271)||(3668183-3668272)
chr2 (182-275)||(27856466-27856559)
chr2 (175-299)||(38590936-38591060)
chr2 (182-274)||(8969477-8969569)
chr2 (189-271)||(22567629-22567711)
chr2 (182-275)||(22068390-22068482)
chr2 (178-270)||(13574095-13574187)
chr2 (182-277)||(27584759-27584854)
chr2 (178-277)||(28600988-28601086)
chr2 (182-277)||(35851821-35851916)
chr2 (175-268)||(1859192-1859286)
chr2 (190-272)||(5093617-5093699)
chr2 (183-272)||(11021293-11021382)
chr2 (182-299)||(32360939-32361055)
chr2 (182-296)||(5881221-5881337)
chr2 (175-271)||(25782895-25782989)
chr2 (182-299)||(34123095-34123210)
chr2 (182-270)||(4022549-4022636)
chr2 (182-254)||(15079029-15079100)
chr2 (175-254)||(39531868-39531947)
chr2 (183-268)||(29102354-29102439)
chr2 (189-271)||(25772137-25772220)
chr2 (189-247)||(15146683-15146740)
chr2 (207-299)||(44854434-44854526)
chr2 (178-270)||(28012020-28012113)
chr2 (211-267)||(30217662-30217719)
chr2 (207-297)||(16807318-16807409)
chr2 (207-297)||(16846599-16846690)
chr2 (201-254)||(40210252-40210306)
chr2 (238-272)||(43993180-43993214)
chr2 (220-269)||(44854338-44854387)
chr2 (207-254)||(20431482-20431530)
chr2 (207-254)||(30834456-30834504)
[»] chr1 (61 HSPs)
chr1 (164-299)||(29210413-29210549)
chr1 (182-299)||(17333352-17333467)
chr1 (182-299)||(5694321-5694437)
chr1 (182-299)||(15227739-15227855)
chr1 (175-299)||(18043162-18043286)
chr1 (182-299)||(19031885-19032001)
chr1 (178-268)||(30294447-30294537)
chr1 (182-299)||(48071483-48071598)
chr1 (182-299)||(29657771-29657887)
chr1 (182-299)||(38162850-38162966)
chr1 (182-299)||(47009993-47010109)
chr1 (182-299)||(51065818-51065934)
chr1 (183-299)||(30657608-30657723)
chr1 (175-269)||(3097688-3097783)
chr1 (182-273)||(9266798-9266889)
chr1 (175-297)||(38701995-38702117)
chr1 (175-272)||(3784775-3784873)
chr1 (182-292)||(6770344-6770453)
chr1 (175-296)||(12072124-12072245)
chr1 (175-299)||(38335170-38335293)
chr1 (182-275)||(24178533-24178626)
chr1 (182-299)||(42770060-42770176)
chr1 (182-273)||(36446395-36446485)
chr1 (182-271)||(35985691-35985780)
chr1 (182-265)||(45431311-45431394)
chr1 (182-268)||(8472984-8473070)
chr1 (182-299)||(29683195-29683312)
chr1 (182-299)||(13961212-13961327)
chr1 (182-299)||(51368855-51368971)
chr1 (182-299)||(14350347-14350463)
chr1 (189-270)||(15282591-15282672)
chr1 (182-271)||(43286749-43286838)
chr1 (182-265)||(50128242-50128325)
chr1 (182-275)||(41730328-41730424)
chr1 (186-299)||(12306918-12307029)
chr1 (189-299)||(47532748-47532855)
chr1 (182-296)||(48383181-48383294)
chr1 (182-275)||(23473534-23473627)
chr1 (191-272)||(26228219-26228300)
chr1 (189-265)||(39497340-39497416)
chr1 (182-268)||(45449314-45449400)
chr1 (189-270)||(35700728-35700808)
chr1 (175-254)||(37315330-37315409)
chr1 (183-299)||(28481844-28481954)
chr1 (196-275)||(39912363-39912442)
chr1 (178-275)||(52749625-52749722)
chr1 (224-298)||(19011108-19011180)
chr1 (175-274)||(30217784-30217886)
chr1 (201-271)||(3838866-3838936)
chr1 (201-252)||(37503260-37503311)
chr1 (201-247)||(52431632-52431678)
chr1 (218-298)||(10976008-10976087)
chr1 (201-299)||(39081803-39081898)
chr1 (202-240)||(19011057-19011095)
chr1 (182-270)||(14881049-14881124)
chr1 (189-299)||(52702221-52702332)
chr1 (207-299)||(28725999-28726092)
chr1 (204-273)||(49867454-49867524)
chr1 (201-296)||(33644423-33644517)
chr1 (207-299)||(38595846-38595939)
chr1 (207-297)||(9413973-9414062)
[»] chr7 (52 HSPs)
chr7 (175-275)||(30810678-30810779)
chr7 (183-299)||(8754656-8754771)
chr7 (183-298)||(47656981-47657095)
chr7 (178-299)||(5239285-5239405)
chr7 (178-296)||(11686390-11686507)
chr7 (182-299)||(24798473-24798588)
chr7 (182-299)||(34606261-34606377)
chr7 (182-299)||(47839493-47839608)
chr7 (182-299)||(1736980-1737096)
chr7 (190-275)||(29993565-29993650)
chr7 (175-267)||(34546376-34546469)
chr7 (182-274)||(27456183-27456275)
chr7 (175-275)||(4628589-4628690)
chr7 (182-299)||(12218506-12218622)
chr7 (182-299)||(18485961-18486077)
chr7 (182-299)||(24438477-24438593)
chr7 (175-271)||(28587936-28588033)
chr7 (190-299)||(34333284-34333392)
chr7 (182-271)||(43594106-43594195)
chr7 (182-272)||(23363237-23363327)
chr7 (175-299)||(7689262-7689386)
chr7 (182-299)||(37631612-37631728)
chr7 (178-266)||(18117175-18117263)
chr7 (182-269)||(45045799-45045886)
chr7 (182-267)||(47083086-47083171)
chr7 (184-299)||(18470012-18470126)
chr7 (189-299)||(5729346-5729455)
chr7 (175-248)||(37674166-37674240)
chr7 (182-271)||(525145-525234)
chr7 (175-274)||(42044355-42044455)
chr7 (189-268)||(13064954-13065033)
chr7 (182-296)||(28262034-28262142)
chr7 (183-272)||(4100595-4100684)
chr7 (178-271)||(33636479-33636572)
chr7 (175-271)||(4087650-4087745)
chr7 (189-268)||(46716668-46716747)
chr7 (178-268)||(29835770-29835860)
chr7 (175-270)||(36437405-36437500)
chr7 (201-253)||(22739868-22739920)
chr7 (188-267)||(3021922-3022000)
chr7 (176-267)||(18220503-18220593)
chr7 (182-266)||(23357780-23357861)
chr7 (205-274)||(18220624-18220693)
chr7 (201-254)||(18220759-18220812)
chr7 (178-236)||(13556474-13556531)
chr7 (175-248)||(20116940-20117013)
chr7 (229-275)||(22973621-22973667)
chr7 (182-223)||(47118059-47118100)
chr7 (243-299)||(47118095-47118150)
chr7 (201-254)||(5785509-5785563)
chr7 (207-299)||(32805538-32805631)
chr7 (207-254)||(41468726-41468774)
[»] chr4 (56 HSPs)
chr4 (182-299)||(43944507-43944623)
chr4 (175-275)||(32217068-32217168)
chr4 (178-299)||(42898812-42898932)
chr4 (182-299)||(789600-789716)
chr4 (178-299)||(4268888-4269008)
chr4 (182-299)||(15186243-15186359)
chr4 (182-298)||(19503175-19503289)
chr4 (182-275)||(32202550-32202643)
chr4 (182-299)||(54897308-54897424)
chr4 (175-299)||(24679705-24679827)
chr4 (187-299)||(54655951-54656062)
chr4 (173-299)||(4220195-4220321)
chr4 (182-297)||(54945848-54945962)
chr4 (182-299)||(28755621-28755736)
chr4 (182-299)||(4089142-4089258)
chr4 (182-299)||(16536048-16536164)
chr4 (182-275)||(29591212-29591305)
chr4 (164-299)||(54054548-54054684)
chr4 (175-299)||(55882684-55882807)
chr4 (182-268)||(39843937-39844023)
chr4 (182-275)||(7768961-7769054)
chr4 (182-299)||(18067949-18068065)
chr4 (175-299)||(43202445-43202569)
chr4 (182-270)||(12356272-12356360)
chr4 (181-296)||(42815113-42815226)
chr4 (175-268)||(36395129-36395223)
chr4 (182-296)||(50619089-50619202)
chr4 (175-299)||(3783563-3783687)
chr4 (182-299)||(6164094-6164209)
chr4 (182-299)||(33108743-33108858)
chr4 (182-299)||(47231942-47232058)
chr4 (182-268)||(37987965-37988051)
chr4 (164-273)||(46688255-46688371)
chr4 (178-299)||(46148941-46149059)
chr4 (182-248)||(30387204-30387270)
chr4 (182-272)||(49915185-49915275)
chr4 (182-275)||(30154233-30154325)
chr4 (182-271)||(52533855-52533944)
chr4 (202-299)||(50167591-50167685)
chr4 (189-271)||(53655955-53656037)
chr4 (182-271)||(31680533-31680622)
chr4 (178-271)||(50603254-50603347)
chr4 (182-275)||(5091680-5091773)
chr4 (175-273)||(1432612-1432703)
chr4 (182-234)||(39877319-39877371)
chr4 (183-247)||(41265510-41265573)
chr4 (187-254)||(53268764-53268830)
chr4 (189-267)||(52697083-52697160)
chr4 (189-246)||(31517217-31517274)
chr4 (178-268)||(17344725-17344814)
chr4 (175-223)||(8133782-8133831)
chr4 (193-238)||(16820912-16820957)
chr4 (192-299)||(8749878-8749985)
chr4 (175-299)||(10110061-10110188)
chr4 (189-254)||(20654719-20654784)
chr4 (175-275)||(34151143-34151245)
[»] chr3 (59 HSPs)
chr3 (182-299)||(272220-272336)
chr3 (182-299)||(48725271-48725387)
chr3 (182-272)||(41554010-41554100)
chr3 (175-299)||(4168183-4168307)
chr3 (182-299)||(20923992-20924108)
chr3 (182-299)||(49893331-49893447)
chr3 (182-299)||(52520681-52520797)
chr3 (183-298)||(42964320-42964434)
chr3 (182-299)||(43786871-43786987)
chr3 (182-299)||(46352634-46352750)
chr3 (182-272)||(858615-858705)
chr3 (173-273)||(2119456-2119557)
chr3 (190-299)||(39074419-39074527)
chr3 (175-299)||(40362642-40362766)
chr3 (178-299)||(52246582-52246702)
chr3 (182-275)||(53489894-53489987)
chr3 (183-299)||(13159897-13160012)
chr3 (178-277)||(29241658-29241757)
chr3 (182-299)||(41304005-41304119)
chr3 (175-271)||(7468438-7468535)
chr3 (175-274)||(22248910-22249010)
chr3 (182-297)||(43269809-43269923)
chr3 (182-271)||(10617354-10617443)
chr3 (182-275)||(18014695-18014788)
chr3 (182-268)||(2505379-2505465)
chr3 (182-299)||(11308280-11308396)
chr3 (190-271)||(28139336-28139417)
chr3 (189-273)||(42548120-42548204)
chr3 (178-270)||(50299011-50299103)
chr3 (182-275)||(49529336-49529432)
chr3 (183-273)||(50359257-50359347)
chr3 (178-275)||(24488389-24488486)
chr3 (182-270)||(2938110-2938198)
chr3 (183-266)||(38852246-38852332)
chr3 (182-266)||(41993689-41993773)
chr3 (190-271)||(50395640-50395721)
chr3 (176-260)||(31514829-31514913)
chr3 (175-246)||(33140937-33141009)
chr3 (182-241)||(6842676-6842735)
chr3 (217-275)||(2391630-2391688)
chr3 (217-275)||(2393391-2393449)
chr3 (166-250)||(2362880-2362965)
chr3 (213-271)||(52718194-52718252)
chr3 (178-254)||(21010041-21010113)
chr3 (175-223)||(52552549-52552597)
chr3 (199-237)||(6842604-6842642)
chr3 (238-299)||(2362801-2362861)
chr3 (219-275)||(23925303-23925359)
chr3 (184-265)||(53054834-53054918)
chr3 (190-254)||(25743854-25743918)
chr3 (178-273)||(34300680-34300775)
chr3 (201-275)||(17752707-17752783)
chr3 (201-275)||(19054027-19054103)
chr3 (203-241)||(6842636-6842674)
chr3 (207-267)||(16990728-16990789)
chr3 (207-270)||(26966523-26966588)
chr3 (207-275)||(27994394-27994463)
chr3 (175-247)||(31436313-31436386)
chr3 (206-254)||(40614474-40614523)
[»] chr6 (43 HSPs)
chr6 (182-297)||(2350654-2350768)
chr6 (175-299)||(1391240-1391363)
chr6 (182-299)||(392096-392212)
chr6 (164-299)||(20897948-20898084)
chr6 (178-299)||(21878413-21878533)
chr6 (182-299)||(23402138-23402254)
chr6 (182-274)||(18276685-18276777)
chr6 (164-274)||(34477600-34477712)
chr6 (182-272)||(12145187-12145277)
chr6 (182-299)||(3515766-3515882)
chr6 (182-275)||(26467194-26467287)
chr6 (182-267)||(34396597-34396682)
chr6 (182-299)||(29451185-29451300)
chr6 (182-296)||(32985263-32985376)
chr6 (182-299)||(7851229-7851345)
chr6 (182-299)||(32929578-32929694)
chr6 (182-275)||(4215718-4215811)
chr6 (182-299)||(12525719-12525835)
chr6 (182-299)||(27433492-27433608)
chr6 (199-299)||(13529455-13529554)
chr6 (175-268)||(25165475-25165569)
chr6 (182-275)||(23629646-23629739)
chr6 (175-271)||(35043917-35044013)
chr6 (183-274)||(3026080-3026171)
chr6 (189-299)||(2580952-2581061)
chr6 (189-295)||(34851926-34852030)
chr6 (175-274)||(13417021-13417124)
chr6 (183-299)||(29978233-29978347)
chr6 (182-299)||(31280321-31280437)
chr6 (175-267)||(28225252-28225344)
chr6 (175-273)||(11115159-11115256)
chr6 (182-272)||(1840317-1840407)
chr6 (182-297)||(9660988-9661102)
chr6 (182-256)||(961051-961125)
chr6 (182-272)||(5323426-5323516)
chr6 (175-297)||(1127817-1127940)
chr6 (227-299)||(14559922-14559993)
chr6 (189-265)||(11633951-11634028)
chr6 (207-254)||(10431780-10431827)
chr6 (207-272)||(3246181-3246247)
chr6 (207-299)||(34706720-34706813)
chr6 (189-265)||(11616208-11616285)
chr6 (239-299)||(34712252-34712312)
[»] scaffold0674 (1 HSPs)
scaffold0674 (164-274)||(7947-8059)
[»] scaffold0549 (1 HSPs)
scaffold0549 (164-274)||(7312-7424)
[»] scaffold0264 (1 HSPs)
scaffold0264 (174-299)||(22961-23086)
[»] scaffold0188 (1 HSPs)
scaffold0188 (182-298)||(6180-6295)
[»] scaffold0524 (1 HSPs)
scaffold0524 (190-299)||(825-933)
[»] scaffold0206 (1 HSPs)
scaffold0206 (165-271)||(11021-11129)
[»] scaffold0002 (1 HSPs)
scaffold0002 (183-299)||(146976-147091)
[»] scaffold0021 (1 HSPs)
scaffold0021 (182-296)||(116207-116320)
[»] scaffold0190 (1 HSPs)
scaffold0190 (182-299)||(14896-15012)
[»] scaffold0003 (1 HSPs)
scaffold0003 (182-299)||(53755-53871)
[»] scaffold1266 (1 HSPs)
scaffold1266 (182-274)||(316-408)
[»] scaffold0045 (2 HSPs)
scaffold0045 (187-271)||(53421-53505)
scaffold0045 (190-299)||(50548-50656)
[»] scaffold1152 (1 HSPs)
scaffold1152 (175-272)||(704-802)
[»] scaffold0014 (1 HSPs)
scaffold0014 (182-275)||(68360-68453)
[»] scaffold0050 (2 HSPs)
scaffold0050 (178-274)||(69250-69346)
scaffold0050 (201-272)||(33770-33841)
[»] scaffold0325 (1 HSPs)
scaffold0325 (175-273)||(17533-17631)
[»] scaffold0263 (1 HSPs)
scaffold0263 (182-267)||(19655-19740)
[»] scaffold0038 (1 HSPs)
scaffold0038 (175-267)||(25750-25842)
[»] scaffold0113 (1 HSPs)
scaffold0113 (182-265)||(40952-41035)
[»] scaffold0034 (1 HSPs)
scaffold0034 (190-270)||(95662-95742)
[»] scaffold0425 (1 HSPs)
scaffold0425 (182-237)||(10771-10826)
[»] scaffold0007 (1 HSPs)
scaffold0007 (182-233)||(233918-233969)
[»] scaffold0533 (1 HSPs)
scaffold0533 (201-267)||(5070-5136)
[»] scaffold1128 (1 HSPs)
scaffold1128 (207-254)||(1415-1462)
[»] scaffold0015 (1 HSPs)
scaffold0015 (175-270)||(74535-74632)


Alignment Details
Target: chr5 (Bit Score: 124; Significance: 2e-63; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 367 - 579
Target Start/End: Original strand, 34820783 - 34821010
Alignment:
Q  367 taatcaaaatgatcacatattatttgtctttattca-----------agagacaagcaactaaggaaggttgcattgggcttcaaatacttctgcatatt 455  Q
    ||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34820783 taatcaaaatgatcacatattatttgtctttattcagccacagtccaagagacaagcaactaaggaaggttgcattgggcttcaaatacttctgcatat- 34820881  T
Q  456 ctcatcatcatcattattattatttacnnnnnnnacatatgagatttgagatttgtatgatctc-------ttcacaagttacactttgaacacacactt 548  Q
      |||||||||||| || |||||||||       ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  34820882 --catcatcatcatcatcattatttactttttttacatatgagatttgagatttgtatgatctcttcacagttcacaagttacactttgaacacacactt 34820979  T
Q  549 tgagtgaggcactatactcaaacctgaggga 579  Q
    |||||||||||||||||||||||||||||||    
T  34820980 tgagtgaggcactatactcaaacctgaggga 34821010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 178 - 299
Target Start/End: Complemental strand, 10070088 - 10069969
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10070088 aaaagaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg-ccccg 10069991  T
Q  278 aaagcaccggttagcatttccc 299  Q
       |||||||||||||||||||    
T  10069990 ggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 35132637 - 35132522
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||   ||    
T  35132637 aaactgtttttgactttattataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaaccagtg-tcccgggggc 35132539  T
Q  283 accggttagcatttccc 299  Q
    |||||||||||||||||    
T  35132538 accggttagcatttccc 35132522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 19647708 - 19647841
Alignment:
Q  164 ggttaagcatac-ataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 261  Q
    |||||||||||| ||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19647708 ggttaagcataccataaaaggaaactgtttatgactttattatcaattaattatacaatttcaatgcattaactactatataatttcctttttcatatcc 19647807  T
Q  262 ttaaccagtgcccccgaaagcaccggttagcattt 296  Q
    |||||||||||||| || |  ||||||||||||||    
T  19647808 ttaaccagtgccccggaga-taccggttagcattt 19647841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 34650903 - 34651018
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |   |    
T  34650903 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcccgggg--g 34651000  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  34651001 caccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 13470267 - 13470151
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||  | |    
T  13470267 gaaactgtttttgactttattataaattaattatacaatttcaatgcattgactactatattatttcctttttcatatccttaaccagtg-ccccatagg 13470169  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  13470168 caccggttagcatttccc 13470151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 13661924 - 13661808
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |   |    
T  13661924 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggg-g 13661826  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  13661825 caccggttagcatttccc 13661808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 184 - 299
Target Start/End: Original strand, 35504312 - 35504426
Alignment:
Q  184 aactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagca 283  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||   |||    
T  35504312 aactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtg-tcccgggggca 35504410  T
Q  284 ccggttagcatttccc 299  Q
    ||||||||||||||||    
T  35504411 ccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 21547464 - 21547579
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||  | |      
T  21547464 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccgatgcccgggga-- 21547561  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  21547562 caccggttagcatttccc 21547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 12506412 - 12506296
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| || | | |    
T  12506412 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatactcttaacgagtgctccag-agg 12506314  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  12506313 caccggttagcatttccc 12506296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 6283686 - 6283562
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||| ||||| |||| |    
T  6283686 cataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaattattatataattttctttttcatatctttaactagtg-c 6283588  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    |||| | |||||||||||||||||||    
T  6283587 cccggaggcaccggttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 8787455 - 8787339
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||| |  |     
T  8787455 gaaactgtttttgatattattataaattaattacacaatttcaatgcattaactactatataatttcatttttcatacccttaaccaatgccccgggga- 8787357  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  8787356 caccggttagcatttccc 8787339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 11958037 - 11958153
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| ||| |||||   |    
T  11958037 gaaactgtttttgactttattatcaattaattacacaatttcattgcattaactactatataatttccttttttatatctttaacctgtg-ccccggggg 11958135  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  11958136 caccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 9721669 - 9721765
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  9721669 cataaaagaaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattactatataatttcctttttcatattcttaaccagt 9721765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 31909747 - 31909659
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  31909747 gaaactgtttttgactttattataaatcaattacacaatttcaatgcattaactactatataatttcccttttaatatccttaaccagt 31909659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 40564470 - 40564557
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaa 265  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40564470 aaaaaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcaaatccttaa 40564557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 186 - 299
Target Start/End: Complemental strand, 4837369 - 4837258
Alignment:
Q  186 ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcacc 285  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |   |||||    
T  4837369 ctgtatttgactttattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatattcttaaccggtgccccgg--ggcacc 4837272  T
Q  286 ggttagcatttccc 299  Q
    ||||| ||||||||    
T  4837271 ggttaacatttccc 4837258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 190 - 299
Target Start/End: Original strand, 10054430 - 10054538
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggtt 289  Q
    ||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| |||||   |||||||||    
T  10054430 ttttgacattattataaattaattacacaatttcaatgcattaattattatataatttcctttttcatacccttaaccagtg-ccccgggggcaccggtt 10054528  T
Q  290 agcatttccc 299  Q
    ||||||||||    
T  10054529 agcatttccc 10054538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 175 - 298
Target Start/End: Complemental strand, 20175351 - 20175228
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||| |    
T  20175351 cataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttctttttttatatttttaaccagtgtc 20175252  T
Q  274 cccgaaagcaccggttagcatttcc 298  Q
     | || | |||||||||||||||||    
T  20175251 tcggaga-caccggttagcatttcc 20175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 11846180 - 11846106
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctta 264  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  11846180 ttttgactttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatcctta 11846106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 190 - 298
Target Start/End: Original strand, 2619635 - 2619742
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggtt 289  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| |||| ||| || | |||| |||    
T  2619635 ttttaactttattataaattaattacacaatttcaatacattaactactaaataattttctttttcatatccttaacaagtgtcccggaga-caccagtt 2619733  T
Q  290 agcatttcc 298  Q
    |||||||||    
T  2619734 agcatttcc 2619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 40057422 - 40057331
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||||| |||||| |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||    
T  40057422 aaactgcttttgattttattataaattaattatactatttcaatgcactaactactatataatttcctttttcatatccttaatcggtgccc 40057331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 19436900 - 19436995
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||| ||||| ||||| ||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||    
T  19436900 cataaaaaaaactatttttaactttat-ataaattaattatacaatttcaatgctttaaccactatataatttcctttttcatatccttaacgagtg 19436995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 39069469 - 39069381
Alignment:
Q  209 taattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  39069469 taattacacaattttaatgcattaactactatataatttcc-ttttcatacccttaaccagtg-ccctggaagcaccggttagcatttccc 39069381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 39067010 - 39067095
Alignment:
Q  187 tgtttttgactttattataaattaattacacaatttcaatgcattaact-actatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||||| | ||||||||||| ||||||||||||||||||||||    
T  39067010 tgtttttgactttattataaattaattacataatttcaatatattaactaattatataatttcttttttcatatccttaaccagtg 39067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 6284892 - 6284822
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||||||||||||  |||||||||||||||    
T  6284892 ttataaattaattatacaatttcaatacattaattactatataatttcctttttagtatccttaaccagtg 6284822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 10956067 - 10955974
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttt-tcatatccttaaccagtgcccc 275  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |  ||| |||||||||||||||    
T  10956067 gaaattgtttttgactttgttataaattaatta-acaatttcaatgcattaactactttataattcccttttatggtatgcttaaccagtgcccc 10955974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 4268677 - 4268620
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactat 240  Q
    |||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||    
T  4268677 gaaactgttttttatttt-ttataaattaattacacaattttaatgcattaactactat 4268620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 299
Target Start/End: Original strand, 21944954 - 21945047
Alignment:
Q  207 attaattacacaatttc-aatgcattaactactatataattt-cctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||| |||||||  |||||| ||| || |||||||||| |||||||  ||||||||||||||| ||||| | |||||||||||||||||||    
T  21944954 attaattaaacaatttttaatgcaataattaatatataattttcctttttattatccttaaccagtg-ccccggaggcaccggttagcatttccc 21945047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 6042142 - 6042210
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||||||||||||||| ||||||| ||| |||||||||||||  |||||  |||| |||||||||||||    
T  6042142 attaattacacaattttcaatgcaataattactatataattttttttttagtatctttaaccagtgccc 6042210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 40608619 - 40608722
Alignment:
Q  197 tttattataaattaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgcccccgaaagcaccggttagcat 294  Q
    ||||||||  |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||| ||| | | ||||||||||||||    
T  40608619 tttattatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgtcccggga-gcaccggttagcat 40608717  T
Q  295 ttccc 299  Q
    |||||    
T  40608718 ttccc 40608722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 39234923 - 39234831
Alignment:
Q  207 attaattacacaatt-tcaatgcattaactactatataatttcctttttcat-atccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||| |||||| |||||||| ||| ||  ||||||||||| |||| || |||||||||| ||||||| ||  |||||||||||||||||||    
T  39234923 attaattaaacaattgtcaatgcaataattaacatataatttccctttttattatccttaacccgtgccccgga--gcaccggttagcatttccc 39234831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 25731440 - 25731508
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttc-aatgcattaactactatataattt 247  Q
    |||||||||| ||||||| ||| |||||| |||||||||||||||  |||||| |||||||||||||||||    
T  25731440 aaaagaaact-tttttgatttt-ttataacttaattacacaatttttaatgcaataactactatataattt 25731508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 22973780 - 22973732
Alignment:
Q  203 ataaattaattacacaatttcaatgcattaactactatataatttcctt 251  Q
    |||||||||||||||||||| ||| |||||  |||||||||| ||||||    
T  22973780 ataaattaattacacaattttaattcattagttactatataacttcctt 22973732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 6e-48; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 27988569 - 27988685
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | |    
T  27988569 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtg-ccccggagg 27988667  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  27988668 caccggttagcatttccc 27988685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 28045871 - 28045987
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | |    
T  28045871 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtg-ccccggagg 28045969  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  28045970 caccggttagcatttccc 28045987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 168582 - 168466
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | |    
T  168582 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtg-ccccggagg 168484  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  168483 caccggttagcatttccc 168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 11112763 - 11112639
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  11112763 cataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg-t 11112665  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    |||| | ||||| |||||||||||||    
T  11112664 cccggatgcaccagttagcatttccc 11112639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 34228798 - 34228682
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |    
T  34228798 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccg-ggg 34228700  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  34228699 caccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 178 - 299
Target Start/End: Complemental strand, 4648314 - 4648195
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  4648314 aaaagaaactgtttttgacattattataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaatcagtgccccgg 4648215  T
Q  278 aaagcaccggttagcatttccc 299  Q
     |  ||||||||||||||||||    
T  4648214 ga--caccggttagcatttccc 4648195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 33357199 - 33357289
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33357199 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 33357289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 298
Target Start/End: Original strand, 16888614 - 16888728
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |   |    
T  16888614 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgcccgggg--g 16888711  T
Q  282 caccggttagcatttcc 298  Q
    |||||||||||||||||    
T  16888712 caccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 30675642 - 30675758
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||   |    
T  30675642 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtg-ccccggggg 30675740  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  30675741 caccggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 16785202 - 16785087
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||  |  ||    
T  16785202 gaaactgtttttgactttattataaattaattacacaatttcaatacattaactgctatataatttcttttttcatatccttaaccagtgccctgg--ag 16785105  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  16785104 caccggttagcatttccc 16785087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 175 - 296
Target Start/End: Original strand, 29444202 - 29444323
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |    
T  29444202 cataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcgttaactactatataatttcctttttcatatccttaatcagtg-c 29444300  T
Q  274 cccgaaagcaccggttagcattt 296  Q
    ||||  ||||||||||| |||||    
T  29444301 cccgggagcaccggttaacattt 29444323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 4537814 - 4537930
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| | |    
T  4537814 gaaactgtttttgactttattatcaattaattacataatttcaatgcattaactactatataatttcctattttatatccttaaccagtg-ccccggagg 4537912  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  4537913 caccggttagcatttccc 4537930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 36730560 - 36730471
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36730560 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtg 36730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 43119341 - 43119217
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |    
T  43119341 cataaaagaaaactgtttttgactttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatctttaatcagtg-c 43119243  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    |||||  |||||||||||||||||||    
T  43119242 cccgagggcaccggttagcatttccc 43119217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 28626888 - 28626789
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  28626888 aaaagaaactgtttttgactttattataaattaatcacacaatttcaatacattaactactatataatttcctttttcacatccttaaccggtgcccccg 28626789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 9063114 - 9063237
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9063114 cataaaagaaaattgtttttgactttattataaattaattgcacgatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgct 9063213  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    || | |  ||||||||||||||||||    
T  9063214 ccggga--caccggttagcatttccc 9063237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 42035043 - 42035141
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42035043 cataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgc 42035141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 13643135 - 13643015
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  13643135 cataaaaggaattttttttgactttattataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtg-cc 13643037  T
Q  275 ccgaaagcaccggttagcattt 296  Q
    |||   ||||||||||||||||    
T  13643036 ccgggggcaccggttagcattt 13643015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 13743560 - 13743440
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  13743560 cataaaaggaattttttttgactttattataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtg-cc 13743462  T
Q  275 ccgaaagcaccggttagcattt 296  Q
    |||   ||||||||||||||||    
T  13743461 ccgggggcaccggttagcattt 13743440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 16890550 - 16890643
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  16890550 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactggtgcccc 16890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 298
Target Start/End: Complemental strand, 21595962 - 21595848
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  |   |    
T  21595962 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactcctatataatttcctttttcatacccttaaccagtgcccgggg--g 21595865  T
Q  282 caccggttagcatttcc 298  Q
    |||||||||||||||||    
T  21595864 caccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 7304588 - 7304671
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaa 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7304588 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 20831623 - 20831737
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||   |    
T  20831623 gaaactgcttttgactttattataaattaattatactatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg-tcccggggg 20831721  T
Q  282 caccggttagcatttc 297  Q
    ||||||||||||||||    
T  20831722 caccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 32114024 - 32113938
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32114024 gaaactgttttttactttattataaattaattaaacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 32113938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 37373329 - 37373206
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||      
T  37373329 cataaaagaaaactgttttcgactttattatcaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtg-- 37373232  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
     |||   |||||||||||||||||||    
T  37373231 tccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 9537890 - 9537982
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||  |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9537890 aaaagaaactccttttgaatttattataaattaattacacaattttaatgcattaactactatataatttcctttttcatatccttaaccagt 9537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 40831401 - 40831302
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  40831401 cataaaagaaaattgtttttgactttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatctttaaccagtgcc 40831302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 12203970 - 12203855
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||   ||||   |    
T  12203970 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggt--acccggggg 12203873  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  12203872 caccggttagcatttccc 12203855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 12448398 - 12448283
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||   ||||   |    
T  12448398 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggt--acccggggg 12448301  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  12448300 caccggttagcatttccc 12448283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 2805330 - 2805419
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2805330 gaaactgcttttgactttattataggttaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtg 2805419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 9253972 - 9254064
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  9253972 gaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgcccc 9254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 16394131 - 16394247
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||||   |    
T  16394131 gaaactgtttttgactttattatcaattaattacattatttcaatgcattaactattatataattttctttttcacatccttaaccagtg-ccccggggg 16394229  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  16394230 caccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 9278317 - 9278212
Alignment:
Q  193 tgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagc 292  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||| | | ||||| ||||||    
T  9278317 tgactttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatctttaacgagtgtccctg-aggcaccagttagc 9278219  T
Q  293 atttccc 299  Q
    |||||||    
T  9278218 atttccc 9278212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 3930303 - 3930395
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  3930303 gaaactgtttttgactttattatcaattaattacacaacttcaatgcattaactactatataatttcctctttcatattattaactagtgccc 3930395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 34192884 - 34192809
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctta 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  34192884 tttttgactttattataaattaattacacaatttcaatgcattaactagtatataatttcctttttcatattctta 34192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 10618123 - 10618021
Alignment:
Q  193 tgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagc 292  Q
    |||||||||||| ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||||  | | ||||||||||||    
T  10618123 tgactttattatcaattaattacacaatttaattgcattaactactatataattttctttttcatatccttaacctgtgccctag-aggcaccggttagc 10618025  T
Q  293 attt 296  Q
    ||||    
T  10618024 attt 10618021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 42433606 - 42433700
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccag 269  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||| |||||||||    
T  42433606 cataaaagaaaactgtttttgacttt-ttataaattaattacacaatttcaatgcattaactattatataatttcctttttagtatgcttaaccag 42433700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 10870468 - 10870382
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| ||||| |||||||    
T  10870468 gaaactgtttttgattttattataaattaattacacaatttcaatgtattaactattatataattttcttttttatatcattaacca 10870382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 29235344 - 29235235
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggt 288  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||| || ||| || | || |||||||    
T  29235344 tttttgattttattataaattaattacacaaatttaatgcattaactactatataatttctttttttatatccttaatcaatgctccgggaa-caccggt 29235246  T
Q  289 tagcatttccc 299  Q
    |||||||||||    
T  29235245 tagcatttccc 29235235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 17467719 - 17467630
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||||||||| ||||  |||||||||||||||||||| ||||| ||||    
T  17467719 gaaattgtttttgattttattatcaattaattacacaatttcaatgcattaattactgcataatttcctttttcatatcattaactagtg 17467630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 12652707 - 12652630
Alignment:
Q  221 ttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |   |||||||||||||||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccag-gggcaccggttagcatttccc 12652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 22956821 - 22956730
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |||| ||||||||| |||| | ||||||||| |||  ||||||||||||||    
T  22956821 gaaactgtttttgacattattataaattaattacataattttaatgtattaactaccatatga-ttccttttttatactcttaaccagtgccc 22956730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 22451892 - 22451835
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataattt 247  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22451892 tttttgacttt-ttataaattaattacacaatttcaatgcattaactgctatataattt 22451835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 39406958 - 39406905
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaact 235  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  39406958 gaaactgtttttgactttattataaattaattacacaattttaacgcattaact 39406905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 30933397 - 30933453
Alignment:
Q  187 tgtttttgactttattataaattaattacacaatttcaatgcattaactactatataa 244  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  30933397 tgtttttaacttt-ttataaattaattacacaatttcaatgcattaattactatataa 30933453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 33124570 - 33124650
Alignment:
Q  189 tttttgactttattataaattaattacacaattt-caatgcattaactactatataatttcctttttca-tatccttaacca 268  Q
    ||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||| | ||||||||||||    
T  33124570 tttttgacttt-ttataaattgattacacaattttcaatgcaataactactatataacttcctttttaagtatccttaacca 33124650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 24843349 - 24843393
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaat 226  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  24843349 gaaactgattttgactttattataaattaattacacaatttcaat 24843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 36923782 - 36923824
Alignment:
Q  231 taactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  36923782 taactattatataatttcctttttcatatccttaatcagtgcc 36923824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 39751533 - 39751658
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaatttc-aatgcattaactactatataattt-cctttttcatatccttaaccagtgc 272  Q
    |||||||| || | || |||||||  ||||| |||||||| |||||||  |||||| ||| || |||||||||| |||||||  |||||||||||||||     
T  39751533 cataaaaggaagttttgttgacttatttatagattaattaaacaatttttaatgcaataaataatatataattttcctttttattatccttaaccagtg- 39751631  T
Q  273 ccccgaaagcaccggttagcatttccc 299  Q
    |||||   |||||||||||||||||||    
T  39751632 ccccgggggcaccggttagcatttccc 39751658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 30933451 - 30933517
Alignment:
Q  231 taactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttcc 298  Q
    |||||||||||||||||||||||| ||||  ||||||||| |||| || | ||||||||| |||||||    
T  30933451 taactactatataatttcctttttaatatgtttaaccagtaccccagaga-caccggttaacatttcc 30933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 35695611 - 35695569
Alignment:
Q  233 actactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||||||||||||| ||||| |||||||||| |||||||||    
T  35695611 actactatataatttcattttttatatccttaatcagtgcccc 35695569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 34890647 - 34890700
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataatttccttttt 254  Q
    |||| |||| ||||||||||||||||| | ||| ||||||||||||| ||||||    
T  34890647 ttatgaattgattacacaatttcaatgtaataaatactatataattttcttttt 34890700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 4811656 - 4811557
Alignment:
Q  201 ttataaattaattacacaattt-caatgcattaactactatataatttcctttttca-tatccttaaccagtgcccccgaaagcaccggttagcatttcc 298  Q
    |||| ||||||||| ||||||| ||||||| ||| ||||||||||||| |||||| | ||| ||||||| ||||||  | | |||||| |||||||||||    
T  4811656 ttatgaattaattatacaattttcaatgcaataattactatataattttcttttttagtattcttaaccggtgcccttg-aggcaccgattagcatttcc 4811558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 6e-48; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 31438762 - 31438646
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  ||    
T  31438762 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtg-ccccgggag 31438664  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  31438663 caccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 561588 - 561704
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |    
T  561588 gaaactgattttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg-ccccggggg 561686  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  561687 caccggttagcatttccc 561704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 20553047 - 20552931
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |    
T  20553047 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccg-ggg 20552949  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  20552948 caccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 32860228 - 32860102
Alignment:
Q  173 tacataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||    
T  32860228 tacataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaaatactatataatttccttttttatatccttaacccgtg 32860129  T
Q  272 cccccgaaagcaccggttagcatttccc 299  Q
    ||||||   |||||||||| ||||||||    
T  32860128 cccccg-gggcaccggttaacatttccc 32860102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 178 - 299
Target Start/End: Complemental strand, 38296297 - 38296178
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||      
T  38296297 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgtattaattactatataattttctttttcatatctttaaccagtgcccc-- 38296200  T
Q  278 aaagcaccggttagcatttccc 299  Q
    ||  ||||||||||||||||||    
T  38296199 aagacaccggttagcatttccc 38296178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 178 - 299
Target Start/End: Complemental strand, 43637284 - 43637165
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | |    
T  43637284 aaaagaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttattcatatccttaaccagtgtctcgg 43637185  T
Q  278 aaagcaccggttagcatttccc 299  Q
       |||||||||||||||||||    
T  43637184 --ggcaccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 31390128 - 31390012
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| | |    
T  31390128 gaaactgtttttgactttattataaattaattacataatttcaatacattaactactatataatttcctttttcatatccttaactagtg-ccccggagg 31390030  T
Q  282 caccggttagcatttccc 299  Q
    |||| |||||||||||||    
T  31390029 caccagttagcatttccc 31390012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 2898186 - 2898098
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2898186 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaaccagtg 2898098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 4381911 - 4381821
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4381911 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgc 4381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 34442594 - 34442717
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||    
T  34442594 cataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatcttctttttcatatccttaacatgtgcc 34442693  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    || |   |||||||||||||||||||    
T  34442694 ccgg--ggcaccggttagcatttccc 34442717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 6580305 - 6580189
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||   |    
T  6580305 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccccg-ggg 6580207  T
Q  282 caccggttagcatttccc 299  Q
    ||| ||||||||||||||    
T  6580206 cactggttagcatttccc 6580189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 22887866 - 22887750
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||| | |    
T  22887866 gaaactgtttttaactttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatccttaaccactg-ccccggagg 22887768  T
Q  282 caccggttagcatttccc 299  Q
    || |||||||||||||||    
T  22887767 catcggttagcatttccc 22887750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 30486326 - 30486233
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30486326 gaaactgtttttgactttattatagtttaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgcccc 30486233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 44588018 - 44587902
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||| |||||   |    
T  44588018 gaaactgttttttactttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatccttaaccggtg-ccccggggg 44587920  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  44587919 caccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 26387126 - 26387218
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaac 266  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26387126 cataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaac 26387218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 26891714 - 26891849
Alignment:
Q  165 gttaagcatac-ataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcct 262  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  26891714 gttaagcataccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaactaatatataatttccttttttatatcct 26891813  T
Q  263 taaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    ||| |||||  ||||   |||||||||||||||||||    
T  26891814 taatcagtg-tcccgggggcaccggttagcatttccc 26891849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 3668183 - 3668272
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  3668183 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttccttttccatacccttaaccagtg 3668272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 27856466 - 27856559
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||    
T  27856466 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgcccc 27856559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 38590936 - 38591060
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||    
T  38590936 cataaaagaaaactgtttttgactttattatcaattaattacacaattttaatacattaactactgtataatttcctttttcatattcttaaccagtgcc 38591035  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    || |  | ||||||||||||||||||    
T  38591036 ccaggga-caccggttagcatttccc 38591060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 8969477 - 8969569
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  8969477 gaaactgcttttgactttattataaattaattacactatttcaatgcattaactactatataattttctttttcatatccttaactagtgccc 8969569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 22567711 - 22567629
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  22567711 tttttgactttattataaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtg 22567629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 22068390 - 22068482
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  22068390 gaaactgtttttgactttattatcaattaattatacaatttcaatgca-taactactatataattccctttttcatatccttaaccagtgcccc 22068482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 13574095 - 13574187
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |  |||||| ||||||||||||||||||||||||||    
T  13574095 aaaagaaactgtttttgactttattataaattaattacacaatttcaatacattaatttttatatattttcctttttcatatccttaaccagt 13574187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 27584854 - 27584759
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||||||    
T  27584854 gaaactgcttttgattttattataaattaattacacaatttcaatgctttaactactatataatttcccttttcatatccttaaccgatgcccccg 27584759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 28601086 - 28600988
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    |||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  28601086 aaaagaaactgtttttaactttattatcaattaattatacaatttcaatgca-taactactttataattccctttttcatatccttaaccagtgcccccg 28600988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 35851821 - 35851916
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  35851821 gaaactgtttttgactttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaaccggtgcccccg 35851916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 1859286 - 1859192
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  1859286 cataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactactatacaatttctttttttatatccttaacca 1859192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 5093617 - 5093699
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  5093617 ttttgactttattataaattaattacacaattttaatgcattaactactatttaatttcctttttcatatccttaactagtgc 5093699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 11021293 - 11021382
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||||||    
T  11021293 aaactgtttttgactttattatatattaattacacaatttcaatgcattaactaccatataatttcttttttcatatctttaatcagtgc 11021382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 32360939 - 32361055
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||||   |    
T  32360939 gaaactgtttttgactttattatcaattaattatattatttcaatgcattaactattatataattttctttttcacatccttaaccagtg-ccccggggg 32361037  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  32361038 caccggttagcatttccc 32361055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 5881337 - 5881221
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcat----taactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||| |||| || |    
T  5881337 gaaactctttttgactttattatcaattaattacacaatttcaatgcatgcattaactactatataatttcctttttcatatccttaacctgtgctccgg 5881238  T
Q  278 aaagcaccggttagcattt 296  Q
     |  |||||||||||||||    
T  5881237 ga--caccggttagcattt 5881221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 25782895 - 25782989
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||| |||||| ||||    
T  25782895 cataaaagaaaattgtttttgactttattataaaataattacacaatttcaatgcatta---actatataatttcctttttcatattcttaactagtg 25782989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 34123095 - 34123210
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||  ||| || |||||||  ||||| | |    
T  34123095 gaaactgtttttgacttt-ttataaattaattacacaaattcaaagcattaactattatataatttcttttttagtatgctcaaccagt-accccggagg 34123192  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  34123193 caccggttagcatttccc 34123210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 4022549 - 4022636
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||| ||||| ||||    
T  4022549 gaaactgtttctgactttattataaattaattacagaatttcaatacattaactactat-taatttcttttttcatattcttaatcagt 4022636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 15079029 - 15079100
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttt 254  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15079029 gaaattgtttttgacttt-ttataaattaattacacaatttcaatacattaactactatataatttccttttt 15079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 39531947 - 39531868
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttt 254  Q
    ||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39531947 cataaaagaaaactggttttgactct-ttataaattaattacacaatttcaatgcattaactactatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 29102354 - 29102439
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||||||  ||||||||||| |||||| |||| ||||||||    
T  29102354 aaactgtttttgactttattataaattaattataaaatttcaatgtattaaccgctatataattttctttttgatattcttaacca 29102439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 25772220 - 25772137
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaacta-ctatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||  | |||||||||||||||||||| |||||| ||||    
T  25772220 tttttgactttattataaattaattacacaatttcattgcattaattatttttataatttcctttttcatattcttaactagtg 25772137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 15146740 - 15146683
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataattt 247  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||    
T  15146740 tttttgacttt-ttataaattaattatacaatttcaatgtattaactattatataattt 15146683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 207 - 299
Target Start/End: Original strand, 44854434 - 44854526
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||||||||  ||||||||||||||| |||||  || |||||||||||||||||    
T  44854434 attaattaaacaattttcaatgcaataattaacatataatttcctttttattatccttaaccagtg-ccccgggagtaccggttagcatttccc 44854526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 28012020 - 28012113
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttc-aatgcattaactactatataattt-cctttttcatatccttaaccagt 270  Q
    |||||||||| || |||||||  ||||| ||||||| ||||||||  |||||| ||| ||||||||||||| ||||||| |||||||||||||||    
T  28012020 aaaagaaact-ttgttgacttatttatagattaattccacaattttgaatgcaataattactatataattttcctttttaatatccttaaccagt 28012113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 30217662 - 30217719
Alignment:
Q  211 attacacaatttcaatgcattaactactatataatttcctttttca-tatccttaacc 267  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||| | |||||||||||    
T  30217662 attacacaatttcaatgcaataaatactatataattttcttttttagtatccttaacc 30217719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 16807318 - 16807409
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttccttttt-catatccttaaccagtgcccccgaaagcaccggttagcatttc 297  Q
    |||||||||||| ||| ||||||| ||||||||||||||||| ||||||  | ||||||||||| || || || | |||||||||||||||||    
T  16807318 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatg-cctcggaggcaccggttagcatttc 16807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 16846599 - 16846690
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttccttttt-catatccttaaccagtgcccccgaaagcaccggttagcatttc 297  Q
    |||||||||||| ||| ||||||| ||||||||||||||||| ||||||  | ||||||||||| || || || | |||||||||||||||||    
T  16846599 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatg-cctcggaggcaccggttagcatttc 16846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 40210306 - 40210252
Alignment:
Q  201 ttataaattaattacacaattt-caatgcattaactactatataatttccttttt 254  Q
    |||| |||||||||||| |||| ||||||| ||||||||||| ||||||||||||    
T  40210306 ttatgaattaattacaccattttcaatgcaataactactataaaatttccttttt 40210252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 272
Target Start/End: Complemental strand, 43993214 - 43993180
Alignment:
Q  238 tatataatttcctttttcatatccttaaccagtgc 272  Q
    |||||||||||||||||||||||||||||| ||||    
T  43993214 tatataatttcctttttcatatccttaaccggtgc 43993180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 44854387 - 44854338
Alignment:
Q  220 tttcaatgcattaactactatataatttcctttttcatatccttaaccag 269  Q
    |||||||||| ||| || |||||||||||||||||  |||||||||||||    
T  44854387 tttcaatgcaataattaatatataatttcctttttattatccttaaccag 44854338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 20431530 - 20431482
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttccttttt 254  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||    
T  20431530 attaattacacagttttcaatgcaataactacaatataatttccttttt 20431482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 30834456 - 30834504
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttccttttt 254  Q
    |||||||||||| ||| ||||||| |||||| |||||||||||||||||    
T  30834456 attaattacacagttttcaatgcaataactattatataatttccttttt 30834504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 6e-48; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 164 - 299
Target Start/End: Complemental strand, 29210549 - 29210413
Alignment:
Q  164 ggttaagcatac-ataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 261  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29210549 ggttaagcataccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccc 29210450  T
Q  262 ttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||||| ||||| | |||||||||||||||||||    
T  29210449 ttaaccagtg-ccccggaggcaccggttagcatttccc 29210413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 17333352 - 17333467
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |   |    
T  17333352 gaaactgtttttgactttattatgaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccgggg--g 17333449  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  17333450 caccggttagcatttccc 17333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 5694437 - 5694321
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||| | |    
T  5694437 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttccctttttatatccttaaccagtg-ccccggagg 5694339  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  5694338 caccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 15227855 - 15227739
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |    
T  15227855 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccg-ggg 15227757  T
Q  282 caccggttagcatttccc 299  Q
     |||||||||||||||||    
T  15227756 taccggttagcatttccc 15227739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 18043286 - 18043162
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |    
T  18043286 cataaaagaaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttccttttttatacccttaaccagtg-c 18043188  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    |||| | |||||||||||||||||||    
T  18043187 cccggaggcaccggttagcatttccc 18043162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 19031885 - 19032001
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||||||  ||    
T  19031885 gaaactgtttttgactttattataaattaattacacaatttcaatgttttaactactatataatttcctttttcatatccttaactaatgcccccg-gag 19031983  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  19031984 caccggttagcatttccc 19032001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 30294447 - 30294537
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30294447 aaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 30294537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 48071598 - 48071483
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| |  ||    
T  48071598 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattatataatttccttttacatatccttaaccagtaccccgg--ag 48071501  T
Q  282 caccggttagcatttccc 299  Q
    || |||||||||||||||    
T  48071500 catcggttagcatttccc 48071483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 29657887 - 29657771
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||   |    
T  29657887 gaaactgtttttgactttattatcaattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtg-ccccggggg 29657789  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  29657788 caccggttagcatttccc 29657771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 38162966 - 38162850
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| | |    
T  38162966 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg-ccccggagg 38162868  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||| ||||||||    
T  38162867 caccggttaacatttccc 38162850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 47010109 - 47009993
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| | |    
T  47010109 gaaactgtttttgaatttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtg-ctccggatg 47010011  T
Q  282 caccggttagcatttccc 299  Q
    ||||| ||||||||||||    
T  47010010 caccgattagcatttccc 47009993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 51065818 - 51065934
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| |  |     
T  51065818 gaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttactttttcatatccttaaccagtgtcccgggga- 51065916  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  51065917 caccggttagcatttccc 51065934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 30657723 - 30657608
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagc 282  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||| |||||  |||    
T  30657723 aaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatgcttaactagtg-ccccgggagc 30657625  T
Q  283 accggttagcatttccc 299  Q
    |||||||||||||||||    
T  30657624 accggttagcatttccc 30657608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 3097783 - 3097688
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccag 269  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3097783 cataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcctttttcatatccttaaccag 3097688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 9266798 - 9266889
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9266798 gaaactgtttttgactttattatgaattaattacacaatttcaatgcattaaatactatataatttcctttttcatatccttaaccagtgcc 9266889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 38701995 - 38702117
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |    
T  38701995 cataaaagaaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-c 38702093  T
Q  274 cccgaaagcaccggttagcatttc 297  Q
    ||||  ||||||||||||||||||    
T  38702094 cccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 3784775 - 3784873
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3784775 cataaaagaaaattgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 3784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 182 - 292
Target Start/End: Complemental strand, 6770453 - 6770344
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||| | |    
T  6770453 gaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaattagtg-ccccggagg 6770355  T
Q  282 caccggttagc 292  Q
    |||||||||||    
T  6770354 caccggttagc 6770344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 175 - 296
Target Start/End: Original strand, 12072124 - 12072245
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |    
T  12072124 cataaaagaaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactacataatttcctttttcatatccttaaccggtg-c 12072222  T
Q  274 cccgaaagcaccggttagcattt 296  Q
    ||||   ||||||||||||||||    
T  12072223 cccgggggcaccggttagcattt 12072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 38335293 - 38335170
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| |    
T  38335293 cataaaagaaaactgtttttgactttattataaattaattacacaattacaatgcattaattactatataatttcctttttcatatctttaaccagtgtc 38335194  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    ||  ||  ||||||||||||||||||    
T  38335193 cc--aagacaccggttagcatttccc 38335170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 24178533 - 24178626
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24178533 gaaactgcttttgactttattatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgcccc 24178626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 42770060 - 42770176
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||   |    
T  42770060 gaaactgtttttgatattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtg-ccccggggg 42770158  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  42770159 caccggttagcatttccc 42770176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 36446395 - 36446485
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  36446395 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttt-atattcttaaccagtgcc 36446485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 35985691 - 35985780
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  35985691 gaaactgtttttcactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaacagtg 35985780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 45431394 - 45431311
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaa 265  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45431394 gaaactatttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaa 45431311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 8472984 - 8473070
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  8472984 gaaactgtttttgactttattataaattaattacacaattttaatgcattaactattatataatttccttttttatatccttaacca 8473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 29683312 - 29683195
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcct-ttttcatatccttaaccagtgcccccgaaa 280  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||| ||||| |||||||||| |||||       
T  29683312 gaaactgtttttgactttattataaattaattatacgatttcaatgcattaactactatataatttcctttttttatatctttaaccagtg-ccccgggg 29683214  T
Q  281 gcaccggttagcatttccc 299  Q
    |||||||||||||||||||    
T  29683213 gcaccggttagcatttccc 29683195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 13961327 - 13961212
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||| |||||   |    
T  13961327 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataattt-tttttttatatccttaacccgtg-ccccggggg 13961230  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  13961229 caccggttagcatttccc 13961212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 51368855 - 51368971
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| | | |    
T  51368855 gaaactatttttgacattattataaattaactacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagt-accctggagg 51368953  T
Q  282 caccggttagcatttccc 299  Q
     |||||||||||||||||    
T  51368954 taccggttagcatttccc 51368971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 14350347 - 14350463
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||| |||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| |||| || |   |    
T  14350347 gaaattgtttttgacattattataaattaattacacaattttaatgcattaactacaatataatttcctttttcatacccttaaccggtgctccgggg-g 14350445  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  14350446 caccggttagcatttccc 14350463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 15282591 - 15282672
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  15282591 tttttgactttattataaattaattacacaatttcaatatattaactactatataattttctttttcatatccttaaccagt 15282672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 43286838 - 43286749
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||| |||||||||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  43286838 gaaactatttttgactttattataaattaattacataatttcaaaacattaactattatataatttcctttttcatatccttaaccagtg 43286749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 50128242 - 50128325
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaa 265  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  50128242 gaaactgcttttaactttattataaattaattacacaatttcaatgcattaactactatgtaattttctttttcatatccttaa 50128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 41730424 - 41730328
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcatta---actactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||| |||||||||| ||||||| |||||||    
T  41730424 gaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattactactatataatttcttttttcatattcttaacccgtgcccc 41730328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 186 - 299
Target Start/End: Complemental strand, 12307029 - 12306918
Alignment:
Q  186 ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcacc 285  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||| ||||| || ||||| | | |||||    
T  12307029 ctgtttttgactttattataaattaattacacaatttcaatgtattaactac-atataattttctttttcgtatcattaactagagccccag-aggcacc 12306932  T
Q  286 ggttagcatttccc 299  Q
    ||||||||||||||    
T  12306931 ggttagcatttccc 12306918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 47532748 - 47532855
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggt 288  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | || || | |||||||    
T  47532748 tttttgactttattatca-ttaattacacaatttcaatgcattaactactatataattttctttttcatatccttaa-cagtactccggaga-caccggt 47532844  T
Q  289 tagcatttccc 299  Q
    |||||||||||    
T  47532845 tagcatttccc 47532855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 48383181 - 48383294
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||  |||||||| ||||||||   ||||||||| |||||||| |||||||||||||| |||||  ||    
T  48383181 gaaactgtttttgactttattatcaattaattacattatttcaatacattaactttcatataattttctttttcacatccttaaccagtg-ccccgggag 48383279  T
Q  282 caccggttagcattt 296  Q
    |||||||||||||||    
T  48383280 caccggttagcattt 48383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 23473534 - 23473627
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||| |||  |||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  23473534 gaaactgctttaaactttattataaattaattatacaatttcaatacattaactgctatataatctcctttttcatatccttaaccaatgcccc 23473627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 26228300 - 26228219
Alignment:
Q  191 tttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  26228300 tttgattttattataaattaattacataatttcaatgcattaactactatataatttcattttttatctccttaaccagtgc 26228219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 39497416 - 39497340
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaa 265  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  39497416 tttttgactttattataaattaattatataattttaatgcattaactactatataattttctttttcatatccttaa 39497340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 45449314 - 45449400
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    ||||||| ||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| |||||| ||||| |||||||    
T  45449314 gaaactgcttttgactttattataatttaattacactattttaatgcattaactactatataattttcttttttatatctttaacca 45449400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 35700728 - 35700808
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||  ||||||||||||||    
T  35700728 tttttgacttt-ttataaattaattacacaatttcaatgtattaactactgtataatttcctttttagtatccttaaccagt 35700808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 37315330 - 37315409
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttt 254  Q
    ||||||||||| |||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37315330 cataaaagaaaactgtctttgacttt-ttataaattaattacataatttcaatgcattaactactatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 28481954 - 28481844
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagc 282  Q
    ||||||||||| | |||||||||||||||||||||||||| |||||||||    || |||||||||||||||||||||||||||||| ||||  | | ||    
T  28481954 aaactgttttt-attttattataaattaattacacaattttaatgcatta----ctgtataatttcctttttcatatccttaaccagggcccaag-aggc 28481861  T
Q  283 accggttagcatttccc 299  Q
    |||||||||||||||||    
T  28481860 accggttagcatttccc 28481844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 196 - 275
Target Start/End: Original strand, 39912363 - 39912442
Alignment:
Q  196 ctttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||||    
T  39912363 cttttttataaattaatcacacaatttcaatgcattaactagtatataatttccctttttatatccttaatcagtgcccc 39912442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 52749722 - 52749625
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||| ||| ||||||| |||||||| |||||| | || ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  52749722 aaaaaaaattgtttttaactttattgtaaatttagtatacaatttcaatacattaactattatataatttcctttttcatatctttaaccaatgcccc 52749625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 19011108 - 19011180
Alignment:
Q  224 aatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttcc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | |  |||||||||||||||||    
T  19011108 aatgcattaactactatataatttcctttttcatatccttaacccgtgccccggga--caccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 175 - 274
Target Start/End: Complemental strand, 30217886 - 30217784
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcc--tttttcatatccttaaccagtg 271  Q
    ||||||||||| || |||||||||||||||||||||||||| | ||||| ||||||||||||||| | ||||| ||  ||||||||||||||| ||||||    
T  30217886 cataaaagaaaactatttttgactttattataaattaattaaataatttaaatgcattaactactctctaattccctttttttcatatccttagccagtg 30217787  T
Q  272 ccc 274  Q
    |||    
T  30217786 ccc 30217784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 3838866 - 3838936
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||  ||| |||||||||||    
T  3838866 ttataaattaattacacaattttaatgcattaactattatataatttcctttttagtatgcttaaccagtg 3838936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 37503311 - 37503260
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataatttccttt 252  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37503311 ttataaattaattacacaatttcaatgtattaactactatataatttccttt 37503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 52431678 - 52431632
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataattt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  52431678 ttataaattaattacacaatttcaatgcattaactactatataattt 52431632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 10976008 - 10976087
Alignment:
Q  218 aatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttcc 298  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| | || | |||||| ||||||||||    
T  10976008 aattttaatgcattaactactatataatctcctttttcatatccttaacaagtgcctcagaga-caccggctagcatttcc 10976087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 39081898 - 39081803
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||||||||| | ||||||||| ||||||||| ||||||||||| |||||  ||| ||||||||||||||  |||  ||||||||||||||||||    
T  39081898 ttataaattaattataaaatttcaatacattaactagtatataatttcatttttagtatgcttaaccagtgcccg-gaa--caccggttagcatttccc 39081803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 19011057 - 19011095
Alignment:
Q  202 tataaattaattacacaatttcaatgcattaactactat 240  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19011057 tataaattaattacacaatttcaatgcattaactactat 19011095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 14881049 - 14881124
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||||||||||||||||||||||||| ||||             |||| |||||||||||||||||||||||||||||||||    
T  14881049 gaaactgtttttgactttattataaattaattatacaa-------------actattatataatttcctttttcatatccttaaccagt 14881124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 52702221 - 52702332
Alignment:
Q  189 tttttgactttattataaattaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgcccccgaaagcaccg 286  Q
    ||||||||||  ||||  |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||| |||||  |||||||    
T  52702221 tttttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtg-ccccgggagcaccg 52702319  T
Q  287 gttagcatttccc 299  Q
    |||||||||||||    
T  52702320 gttagcatttccc 52702332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 299
Target Start/End: Original strand, 28725999 - 28726092
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttcctttttca-tatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||| ||||||| ||||||| ||| ||  |||||||||||||||| | ||||||||||||||| |||||   |||||||||||||||||||    
T  28725999 attaattaaacaattttcaatgcaataattaacatataatttccttttttattatccttaaccagtg-ccccgggggcaccggttagcatttccc 28726092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 49867524 - 49867454
Alignment:
Q  204 taaattaattacacaatttcaatgcattaactactatataa-tttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||||||||||||||  |||||| |||||||||| |||| |||||  |||| ||||||||||||    
T  49867524 taaattaattacacaatttcaaaacattaattactatataactttcttttttagtatcattaaccagtgcc 49867454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 201 - 296
Target Start/End: Original strand, 33644423 - 33644517
Alignment:
Q  201 ttataaattaattacacaa-tttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcattt 296  Q
    |||| |||||||||||||| |||||||||| ||| || |||||||||| |||||| ||| |||||||| |||| ||  | ||||| |||||||||||    
T  33644423 ttatgaattaattacacaattttcaatgcaataattattatataattttcttttttatagccttaacctgtgctcc--agagcactggttagcattt 33644517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 299
Target Start/End: Original strand, 38595846 - 38595939
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||| |||||   |||||||||||||||||||    
T  38595846 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtg-ccccgggggcaccggttagcatttccc 38595939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 9413973 - 9414062
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttc 297  Q
    |||||||||||| ||| |||| || ||| |||| |||||||| |||||| ||||| ||||||| |||||| |   |||||||||||||||||    
T  9413973 attaattacacagttttcaattcaataattactgtataattttctttttaatatctttaaccaatgccccggg--gcaccggttagcatttc 9414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 30810779 - 30810678
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30810779 cataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 30810680  T
Q  274 cc 275  Q
    ||    
T  30810679 cc 30810678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 183 - 299
Target Start/End: Original strand, 8754656 - 8754771
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |  ||    
T  8754656 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcatttttcatatccttaaccagtgctccc-agggc 8754754  T
Q  283 accggttagcatttccc 299  Q
    |||||||||||||||||    
T  8754755 accggttagcatttccc 8754771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 183 - 298
Target Start/End: Complemental strand, 47657095 - 47656981
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagc 282  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  47657095 aaactgcttttaactttattataaattaattacacaatttcaatgcattaattactatataattttctttttcatatccttaaccagtgcccccg-aagc 47656997  T
Q  283 accggttagcatttcc 298  Q
    ||||||||||||||||    
T  47656996 accggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 178 - 299
Target Start/End: Complemental strand, 5239405 - 5239285
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | |||    
T  5239405 aaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtg-ctccg 5239307  T
Q  278 aaagcaccggttagcatttccc 299  Q
     | |||||||||||||||||||    
T  5239306 gaggcaccggttagcatttccc 5239285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 178 - 296
Target Start/End: Original strand, 11686390 - 11686507
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   ||||    
T  11686390 aaaaaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagt-atcccg 11686488  T
Q  278 aaagcaccggttagcattt 296  Q
     ||||||| ||||||||||    
T  11686489 gaagcaccagttagcattt 11686507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 24798473 - 24798588
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||  |   |    
T  24798473 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctcaacaagtgcccgggg--g 24798570  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  24798571 caccggttagcatttccc 24798588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 34606377 - 34606261
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | |    
T  34606377 gaaactgcttttgactttattataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtg-ccccggagg 34606279  T
Q  282 caccggttagcatttccc 299  Q
    |||| |||||||||||||    
T  34606278 caccagttagcatttccc 34606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 47839608 - 47839493
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||| | |      
T  47839608 gaaactgtttttgactttattataaattaattacacaatttcaatgtattaactattatataaattcctttttcatatccttaaccagtaccccggga-- 47839511  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  47839510 caccggttagcatttccc 47839493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 1737096 - 1736980
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||| ||||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| | |||    
T  1737096 gaaaatgtttttaactttattatcaattaattacactatttcaatgcattaactattatataatttcatttttcatatccttaaccagtgccccag-aag 1736998  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  1736997 caccggttagcatttccc 1736980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 29993565 - 29993650
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29993565 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgcccc 29993650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 34546376 - 34546469
Alignment:
Q  175 cataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34546376 cataaaagtaaactgtttttgactttactataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 34546469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 27456183 - 27456275
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  27456183 gaaactgcttttgactttattataaattaattacacaatttcaatgcattaactactatataatttctttttccatatccttaaccagtgccc 27456275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 4628690 - 4628589
Alignment:
Q  175 cataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  4628690 cataaaagtaaactgtttctgactttattataaattaattaaacaatttcaatgtattaactactatataatttcctttttcatatccttaaccggtgcc 4628591  T
Q  274 cc 275  Q
    ||    
T  4628590 cc 4628589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 12218506 - 12218622
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||   |    
T  12218506 gaaactattttttattttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatacttatccagtg-ccccggggg 12218604  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  12218605 caccggttagcatttccc 12218622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 18486077 - 18485961
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||  |||||||||||||||| |||||   |    
T  18486077 gaaactgtttttaactttattataaattaattacacaatttcaatacattaattactatataatttccttttcaatatccttaaccagtg-ccccggggg 18485979  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  18485978 caccggttagcatttccc 18485961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 24438593 - 24438477
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |||| |||||   |    
T  24438593 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaactagtg-ccccggggg 24438495  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  24438494 caccggttagcatttccc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 28588033 - 28587936
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  28588033 cataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattgactactatataatttcctttttcatatccttaaccagtg 28587936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 34333392 - 34333284
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggtt 289  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||   |||||||||    
T  34333392 ttttgacattattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatacccttaaccagtg-ccccgggggcaccggtt 34333294  T
Q  290 agcatttccc 299  Q
    ||||||||||    
T  34333293 agcatttccc 34333284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 43594106 - 43594195
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  43594106 gaaactgtttttgactttattataaattaattatacaatttcaatgcattaactattatataatttccttttttatatccttaaccagtg 43594195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 23363237 - 23363327
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  23363237 gaaactgtttttaactttattataaattaattacacaatttcaatgcattaactactatacaatttcctttttcttatccttaacgagtgc 23363327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 7689262 - 7689386
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||| ||||| |    
T  7689262 cataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattactgtaaaatttccttttttatatccttaatcagtgtc 7689361  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    || || | ||||||||| ||||||||    
T  7689362 ccagaga-caccggttaacatttccc 7689386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 37631612 - 37631728
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||||||||| || ||||||||||||||||| |||||||||||| ||| ||||| |||    
T  37631612 gaaactgtttttgattttattataaattaattacataattttaatgcattaattattatataatttccttttttatatccttaacccgtg-ccccggaag 37631710  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||| ||||||||    
T  37631711 caccggttaacatttccc 37631728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 18117263 - 18117175
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaac 266  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  18117263 aaaaaaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctctttcatatacttaac 18117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 182 - 269
Target Start/End: Complemental strand, 45045886 - 45045799
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccag 269  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  45045886 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaattactatataatttcatttttcatacccttaaccag 45045799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 47083171 - 47083086
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  47083171 gaaactgtttttaactttattatcaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaacc 47083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 184 - 299
Target Start/End: Original strand, 18470012 - 18470126
Alignment:
Q  184 aactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagca 283  Q
    |||||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||||||||||||  ||| ||||||| |||||||||   |||    
T  18470012 aactgtttttgacttt-tcataaattaattacacaatttcaatgtattaactgctatataatttcctttttagtatgcttaaccggtgcccccgggggca 18470110  T
Q  284 ccggttagcatttccc 299  Q
    ||||||||||||||||    
T  18470111 ccggttagcatttccc 18470126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 5729455 - 5729346
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggt 288  Q
    |||||||||||||||| |||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| || | || |||||||    
T  5729455 tttttgactttattatcaattaattacattatttcaatacattaactattatataatttcctttttcatatccttaaccagtgctccgggaa-caccggt 5729357  T
Q  289 tagcatttccc 299  Q
    || ||||||||    
T  5729356 taacatttccc 5729346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 37674166 - 37674240
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttc 248  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37674166 cataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttc 37674240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 525145 - 525234
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||    
T  525145 gaaactgtttttgattttattataaattaattatacaatttcaatgcattaactactgtatacttttctttttcatatctttaaccagtg 525234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 175 - 274
Target Start/End: Original strand, 42044355 - 42044455
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||| | |||||| |||||    
T  42044355 cataaaagaaaactgtttttgacattattataaattaattacacaatttcaatctattaactactatataatttcttttttcatacctttaaccggtgcc 42044454  T
Q  274 c 274  Q
    |    
T  42044455 c 42044455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 13064954 - 13065033
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| || |||||||||||||||||||||||||||||||    
T  13064954 tttttgactttattataaattaattacacaaattcaatacattaaatattatataatttcctttttcatatccttaacca 13065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 28262142 - 28262034
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||     |||||||||||||||||||||||||||||||||||| |||  |||| | |    
T  28262142 gaaactgtttttgattttattatcaattaattacataatttcaat-----aactactatataatttcctttttcatatccttaaccggtg-acccggagg 28262049  T
Q  282 caccggttagcattt 296  Q
    |||||||||||||||    
T  28262048 caccggttagcattt 28262034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 4100595 - 4100684
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||||| || ||||||||||||| ||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||    
T  4100595 aaactgtttttgatttgattataaattaataacataattttaatacattaattactatataatttcctttttcatatccttaaccggtgc 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 33636572 - 33636479
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||| |||||| ||||    
T  33636572 aaaataaactattttttactttattataaattaattacacaatttcaatgaattaattattatataattttctttttcatattcttaactagtg 33636479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 4087745 - 4087650
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||||||||||||||   | |||||||||||| |||| ||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  4087745 cataaaagaaactgtttttgaaact-ttataaattaatcacactatttcaatgcattaactactatataatttcctttttagtatgcttaaccagtg 4087650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 46716747 - 46716668
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||||| ||||| |||||||    
T  46716747 tttttgactttattataaattaattacataatttcagtgcattaagtattatataatttccttttttatatctttaacca 46716668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 29835770 - 29835860
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    |||| ||||||||||| ||||||||| ||||||||||| |||||| ||| ||||||||| ||||||| ||||||||||||||| |||||||    
T  29835770 aaaaaaaactgtttttaactttattacaaattaattacgcaattttaatacattaactagtatataacttcctttttcatatctttaacca 29835860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 36437500 - 36437405
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||| || ||||||||||| |||||||||||||| |||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||    
T  36437500 cataaaagaaaactatttttgacttt-ttataaattaattaaacaatttcaatgaattacctactatataattacctttttagtatccttaaccagt 36437405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 22739920 - 22739868
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataatttcctttt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22739920 ttataaattaattacacaatttcaatgcattaactactatatactttcctttt 22739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 3022000 - 3021922
Alignment:
Q  188 gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    |||| ||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||| |||||||    
T  3022000 gtttatgacttt-ttataaattaattatacaatttcaatgtattaactagtatataatttcctttttaatatgcttaacc 3021922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 18220503 - 18220593
Alignment:
Q  176 ataaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    |||||||||| ||||||||||  | |||||||||||||||||||||| ||| |||||| ||||||||||||| ||||||  |||||||||||    
T  18220503 ataaaagaaattgtttttgacaat-ttataaattaattacacaattttaatacattaattactatataattttctttttagtatccttaacc 18220593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 23357780 - 23357861
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaac 266  Q
    |||||||||||||||||| |||||||||||||| ||   |  |||||||||||||||||| ||||| ||||||||||||||||||    
T  23357780 gaaactgtttttgacttttttataaattaattatac---tgaaatgcattaactactatacaattttctttttcatatccttaac 23357861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 18220624 - 18220693
Alignment:
Q  205 aaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||||||||||||||||||||| || ||| ||||||||||||||||||||  ||| ||||||||| ||||    
T  18220624 aaattaattacacaatttcaatacagtaattactatataatttcctttttagtattcttaaccagcgccc 18220693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 18220759 - 18220812
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataatttccttttt 254  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  18220759 ttataaattaattacacaatttctatacattaattactatataatttccttttt 18220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 13556531 - 13556474
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaacta 236  Q
    |||||| | |||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  13556531 aaaagatattgttattgacttt-ttataaattaattacacaatttcaatgcattgacta 13556474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 20117013 - 20116940
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttc 248  Q
    ||||||||||| ||||||||| | || ||| ||||| | ||||||||||||||||||||| ||||||||||||||    
T  20117013 cataaaagaaaactgtttttggcctt-ttaaaaatttactacacaatttcaatgcattaattactatataatttc 20116940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 22973667 - 22973621
Alignment:
Q  229 attaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  22973667 attaactactatataatttctttttttatatcattaaccagtgcccc 22973621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 47118059 - 47118100
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttc 223  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  47118059 gaaactgctcttgactttattataaattaattacacaatttc 47118100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 47118095 - 47118150
Alignment:
Q  243 aatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||||||||||||| |||||||||| ||||| | ||||| |||||||||||||    
T  47118095 aatttcctttttcatatctttaaccagtg-ccccggaggcaccagttagcatttccc 47118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 5785563 - 5785509
Alignment:
Q  201 ttataaattaattacacaa-tttcaatgcattaactactatataatttccttttt 254  Q
    ||||||||||||||||||| ||||| | |||||| ||||||| ||||||||||||    
T  5785563 ttataaattaattacacaattttcactacattaattactataaaatttccttttt 5785509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 32805631 - 32805538
Alignment:
Q  207 attaattacacaatttc-aatgcattaactactatataatttcctttttcat-atccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||| |||||||  |||||| ||| ||  ||||||||||| |||| || |||||||||||||||||| | || ||||||||||||||||||    
T  32805631 attaattaaacaatttttaatgcaataattaacatataatttccctttttattatccttaaccagtgccccgggaa-caccggttagcatttccc 32805538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 41468726 - 41468774
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttccttttt 254  Q
    |||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  41468726 attaattacacaattttcaatgtaataattactatataatttccttttt 41468774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 43944623 - 43944507
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | |    
T  43944623 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtg-ccccggagg 43944525  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  43944524 caccggttagcatttccc 43944507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 32217168 - 32217068
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32217168 cataaaaaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccc 32217069  T
Q  275 c 275  Q
    |    
T  32217068 c 32217068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 178 - 299
Target Start/End: Original strand, 42898812 - 42898932
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |    
T  42898812 aaaagaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtg-ccctg 42898910  T
Q  278 aaagcaccggttagcatttccc 299  Q
     |||||||| ||| ||||||||    
T  42898911 gaagcaccgattaacatttccc 42898932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 789600 - 789716
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||   |    
T  789600 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaacccgtg-ccccggggg 789698  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  789699 caccggttagcatttccc 789716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 178 - 299
Target Start/End: Original strand, 4268888 - 4269008
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  4268888 aaaagaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-ccccg 4268986  T
Q  278 aaagcaccggttagcatttccc 299  Q
       |||||||||||||||||||    
T  4268987 ggggcaccggttagcatttccc 4269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 15186359 - 15186243
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||   |    
T  15186359 gaaactgtttttgacattattataaattaattacacaatttcaatggattaactactatataatttcctttttcatacccttaaccagtg-ccccggggg 15186261  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  15186260 caccggttagcatttccc 15186243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 298
Target Start/End: Original strand, 19503175 - 19503289
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||   ||||  ||    
T  19503175 gaaactgtttttgactttattataaattaattacacaatttcaatgtattaactagtatataatttcctttttcatatccttaaccagt--acccgggag 19503272  T
Q  282 caccggttagcatttcc 298  Q
    |||||||||||||||||    
T  19503273 caccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 32202550 - 32202643
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  32202550 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaacccgtgcccc 32202643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 54897424 - 54897308
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||   |    
T  54897424 gaaattgtttttgactttattataaattaattatacaatttcaatgcattaactactatataatttcctttctcatatccttaaccagtg-ccccggggg 54897326  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  54897325 caccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 24679705 - 24679827
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||    
T  24679705 cataaaggaaattgtttttaactttattataaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtg-cc 24679803  T
Q  275 ccgaaagcaccggttagcatttccc 299  Q
    |||| | ||||||||||||||||||    
T  24679804 ccgaga-caccggttagcatttccc 24679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 187 - 299
Target Start/End: Original strand, 54655951 - 54656062
Alignment:
Q  187 tgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccg 286  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||     
T  54655951 tgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagtgcccccggaa-cacca 54656049  T
Q  287 gttagcatttccc 299  Q
    |||| ||||||||    
T  54656050 gttaacatttccc 54656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 4220321 - 4220195
Alignment:
Q  173 tacataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||     
T  4220321 tacataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaacccgt- 4220223  T
Q  272 cccccgaaagcaccggttagcatttccc 299  Q
     ||||||| ||| |||||| ||||||||    
T  4220222 accccgaaggcatcggttatcatttccc 4220195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 54945848 - 54945962
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||     
T  54945848 gaaattgtttttgactttattataaattaattacacaatttcaatacattaactgctatataatttcctttttcatatccttaaccagtgccccagaaa- 54945946  T
Q  282 caccggttagcatttc 297  Q
    || |||||| ||||||    
T  54945947 catcggttaacatttc 54945962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 28755736 - 28755621
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |      
T  28755736 gaaactgtttctaactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccctggga-- 28755639  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  28755638 caccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 4089258 - 4089142
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||| |   |    
T  4089258 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaatcagtgccccag-ggg 4089160  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  4089159 caccggttagcatttccc 4089142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 16536164 - 16536048
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||   |    
T  16536164 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaatccgtg-ccccggggg 16536066  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  16536065 caccggttagcatttccc 16536048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 29591305 - 29591212
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  29591305 gaaactgtttttgactttattataaattaagtacacaatttcaatgcattaactactatataatttccttattcatattcttaaccagtgcccc 29591212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 164 - 299
Target Start/End: Complemental strand, 54054684 - 54054548
Alignment:
Q  164 ggttaagcatac-ataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 261  Q
    |||||||||||| ||||||| ||| |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  54054684 ggttaagcataccataaaaggaaattgtttttgactttattatcaattaattacactatttcaatgcattaactattatataatttcttttttcatatcc 54054585  T
Q  262 ttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||| |||||||||   |||||||||||||||||||    
T  54054584 ttaaccggtgcccccg-gggcaccggttagcatttccc 54054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 55882807 - 55882684
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| ||||||    
T  55882807 cataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattactatataattt-ttttttcatatccttaacgagtgcc 55882709  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    || || | ||||||||||||||||||    
T  55882708 ccggaga-caccggttagcatttccc 55882684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 39844023 - 39843937
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39844023 gaaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcatttttcatatccttaacca 39843937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 7769054 - 7768961
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7769054 gaaactgtttttaacattattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaaccagtgcccc 7768961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 18067949 - 18068065
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||   |    
T  18067949 gaaactatttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtg-ccccggggg 18068047  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  18068048 caccggttagcatttccc 18068065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 43202445 - 43202569
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||| |    
T  43202445 cataaaagaaaactgtttttgacattattataaattaattacacaattttaatgcattaattactatataatttcctttttcatacccttaactagtg-c 43202543  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    ||||   |||||||||||||||||||    
T  43202544 cccgggggcaccggttagcatttccc 43202569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 12356360 - 12356272
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12356360 gaaactgtttttgactttattataaattaattatataatttcaatgtattaactactatataatttcctttttcatatccttaaccagt 12356272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 42815226 - 42815113
Alignment:
Q  181 agaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaa 280  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||| | ||  | |    
T  42815226 agaaactgtttttgactttattataaattaattacataatttcaatacattaactatgatataatttcctttttcatatccttaaccagtactcc--aga 42815129  T
Q  281 gcaccggttagcattt 296  Q
    ||||||||||||||||    
T  42815128 gcaccggttagcattt 42815113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 36395223 - 36395129
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  36395223 cataaaagaaaactgcttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatttttaacca 36395129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 50619202 - 50619089
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||  ||    
T  50619202 gaaactgttttttactttattataaattaagtacacaatttcaatgcattaactactatataattttctttttcatattcttaatcagtg-ccccgggag 50619104  T
Q  282 caccggttagcattt 296  Q
    |||| ||||||||||    
T  50619103 caccagttagcattt 50619089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 3783563 - 3783687
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||  |||||| ||| |    
T  3783563 cataaaagaaaactgtttttgactttattatcaattaattaaacaattttaatgcattaactactatataatttcatttttcatatgtttaaccggtg-c 3783661  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    |||| | |||||||||||||||||||    
T  3783662 cccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 6164209 - 6164094
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| |||| | ||    
T  6164209 gaaactgttttttgctttattataaattaattacacaatttcaatgcattaactactatataattttc-ttttgatatccttaaccagtg-ccccaagag 6164112  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||| ||||||||    
T  6164111 caccggttatcatttccc 6164094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 33108743 - 33108858
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||| | |    
T  33108743 gaaactgtttttgactttattatcaattaattatactatttcaatgcattaactattatataatttcctttttcatat-cttaaccagtg-ccccggagg 33108840  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||| ||||||||    
T  33108841 caccggttaacatttccc 33108858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 47231942 - 47232058
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| || |   |    
T  47231942 gaaactgtttttgactttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaaccagtgctccgggg-g 47232040  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  47232041 caccggttagcatttccc 47232058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 37988051 - 37987965
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  37988051 gaaactgtttttaacattattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaacca 37987965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 46688255 - 46688371
Alignment:
Q  164 ggttaagcatac-ataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcc-----tttttca 256  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |     |||||||    
T  46688255 ggttaagcataccataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactactgtataattttctttaatttttca 46688354  T
Q  257 tatccttaaccagtgcc 273  Q
    |||||||||||||||||    
T  46688355 tatccttaaccagtgcc 46688371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 178 - 299
Target Start/End: Complemental strand, 46149059 - 46148941
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| |||| | | |||||  |    
T  46149059 aaaagaaattgtttttgactttattataaattaattacacaatttcaatgtattaattattatataatttcctttttcatattcttatcaaatgcccggg 46148960  T
Q  278 aaagcaccggttagcatttccc 299  Q
       |||||||||||||||||||    
T  46148959 ---gcaccggttagcatttccc 46148941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 30387204 - 30387270
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30387204 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttc 30387270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 49915275 - 49915185
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||| || ||||||||||||||||| ||||||    
T  49915275 gaaactgttttttactttattataaattaattacacaatttcaatacattaattactatataaatttctttttcatatccttaatcagtgc 49915185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 30154233 - 30154325
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  30154233 gaaattgtttttgattttattataaattaattacataatttcaatacattaactactatataatttcctttttcatat-cttaactagtgcccc 30154325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 52533855 - 52533944
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||| ||||||||||| |||||||||  |||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  52533855 gaaactgttttcgactttattatcaattaattattcaatttcagtgcattaactactatataatttcctttttcatattcttaaccagtg 52533944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 202 - 299
Target Start/End: Complemental strand, 50167685 - 50167591
Alignment:
Q  202 tataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||| |||||||||| |||||| | ||||||||||||||||||    
T  50167685 tataaattaattacacaatttcaatgcattaactac--tataattttctttttcatatctttaaccagtg-ccccgagaacaccggttagcatttccc 50167591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 53655955 - 53656037
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||    
T  53655955 tttttaactttattataaattaattacacaatttcaatacattaactattatataatttcttttttcatatccttaacaagtg 53656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 31680533 - 31680622
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| || |||||||||| ||||||||||||    
T  31680533 gaaattgtttttgactttattataaattaattatacaatttcaatgcattaactattatgtaactttctttttcatacccttaaccagtg 31680622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 50603347 - 50603254
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| || |||| ||||||||||| || | ||||||||||||    
T  50603347 aaaaaaaactgtttttgacattattataaattaattacacaatttcaatgcattaattattatacaatttccttttccacacccttaaccagtg 50603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 5091680 - 5091773
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||||||| |||||||||||||||||||||||||||||| |||  ||||| || ||||||||||  |||||||||| |||||||||||||||    
T  5091680 gaaactgtttatgactttattataaattaattacacaattttaatatattaattattatataattttatttttcatattcttaaccagtgcccc 5091773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 1432612 - 1432703
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||||||||||| | |||||||||||||||||   ||    ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  1432612 cataaaagaaactgttttttattttattataaattaatt---ca----caatgtattaactattatataatttcctttttcatatccttaaccagtgcc 1432703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 39877319 - 39877371
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaac 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39877319 gaaactgtttttgactttattataaattaattacacaatttcaatacattaac 39877371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 41265573 - 41265510
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataattt 247  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  41265573 aaactgtttttgatttt-ttataaattaattacacaatttcactgcattaactactatataattt 41265510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 53268830 - 53268764
Alignment:
Q  187 tgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttt 254  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  53268830 tgtttttgacttt-ttataaattaattacacaattttaatgcattaactaatatataatttctttttt 53268764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 52697160 - 52697083
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    |||||||||||||||||||||| ||| | ||||| |||| |||||||||||||||||||  ||||||||||||||||||    
T  52697160 tttttgactttattataaatta-ttatataattttaatgtattaactactatataattttgtttttcatatccttaacc 52697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 31517274 - 31517217
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatt 246  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  31517274 tttttgactttattatcaattaattacactatttcaatgcattaactattatataatt 31517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 17344725 - 17344814
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    |||||||||| ||||| | ||| |||||| ||||||| | ||||| ||||||||||||| ||||||||||| |||||  ||| ||||||||    
T  17344725 aaaagaaactttttttaaattt-ttataatttaattatataatttaaatgcattaactattatataatttcatttttattatacttaacca 17344814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 8133831 - 8133782
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttc 223  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  8133831 cataaaagaaaactatttttgactttattataaattaattacacattttc 8133782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 16820957 - 16820912
Alignment:
Q  193 tgactttattataaattaattacacaatttcaatgcattaactact 238  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||    
T  16820957 tgactttattataagttaattacagaatttcaatgcattaattact 16820912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 299
Target Start/End: Original strand, 8749878 - 8749985
Alignment:
Q  192 ttgactttattataaattaattacacaattt-caatgcattaactactatataatttcctttttca-tatccttaaccagtgcccccgaaagcaccggtt 289  Q
    |||||||  ||||| |||||||||||||||| ||||| | ||| || |||| ||||| |||||| | || ||||| |||||||||| ||  |||||||||    
T  8749878 ttgacttatttatagattaattacacaattttcaatgtaataattattataaaattttcttttttagtaaccttagccagtgccccgga--gcaccggtt 8749975  T
Q  290 agcatttccc 299  Q
    ||||||||||    
T  8749976 agcatttccc 8749985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 10110061 - 10110188
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaa---tttcaatgcattaactactatataattt-cctttttcatatccttaaccagt 270  Q
    ||||||||||| | || |||||||  ||||| |||||||| ||||   |||||||||| ||| ||  ||||||||| |||||||  ||||||||| ||||    
T  10110061 cataaaagaaagttttgttgacttatttatagattaattaaacaattttttcaatgcaataattaacatataatttccctttttattatccttaatcagt 10110160  T
Q  271 gcccccgaaagcaccggttagcatttccc 299  Q
    |  |||| | |||||||||||||||||||    
T  10110161 g-tcccggaggcaccggttagcatttccc 10110188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 20654784 - 20654719
Alignment:
Q  189 tttttgactttattataaattaattacacaattt-caatgcattaactactatataatttccttttt 254  Q
    ||||||||||| ||||  |||||||||||||||| ||||||| || ||||| |||||||||||||||    
T  20654784 tttttgacttt-ttattgattaattacacaattttcaatgcaatagctactctataatttccttttt 20654719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 34151245 - 34151143
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaattt-caatgcattaactactatataattt-cctttttcatatccttaaccagtgc 272  Q
    ||||||||||| | || |||||||  ||||  |||||||| ||||||| ||||||| ||| ||  ||||||||| |||||||  ||||||||||||||||    
T  34151245 cataaaagaaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataattttcctttttattatccttaaccagtgc 34151146  T
Q  273 ccc 275  Q
    |||    
T  34151145 ccc 34151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 272336 - 272220
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |    
T  272336 gaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg-ccccggggg 272238  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  272237 caccggttagcatttccc 272220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 48725387 - 48725271
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |    
T  48725387 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccg-ggg 48725289  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  48725288 caccggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 41554010 - 41554100
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41554010 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 41554100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 4168307 - 4168183
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||  |    
T  4168307 cataaaagaaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagt-tc 4168209  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    |||| | |||||||||||||||||||    
T  4168208 cccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 20924108 - 20923992
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||| |||    
T  20924108 gaaactgtttttgatattattataaattaattacacaatttcaatgaattaactactatataatttcctttttcatacccttaaccagtg-ccccggaag 20924010  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  20924009 caccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 49893447 - 49893331
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||   |    
T  49893447 gaaactgtttttgactttattatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtg-ccccggggg 49893349  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  49893348 caccggttagcatttccc 49893331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 52520797 - 52520681
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||   |    
T  52520797 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtg-ccccggggg 52520699  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  52520698 caccggttagcatttccc 52520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 183 - 298
Target Start/End: Original strand, 42964320 - 42964434
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||    
T  42964320 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtg-ccccggaagc 42964418  T
Q  283 accggttagcatttcc 298  Q
    ||| |||| |||||||    
T  42964419 accagttaacatttcc 42964434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 43786987 - 43786871
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||| | |    
T  43786987 gaaactgtttttgatattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtg-ccccggagg 43786889  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  43786888 caccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 46352750 - 46352634
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||   |    
T  46352750 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtg-ccccggggg 46352652  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  46352651 caccggttagcatttccc 46352634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 858705 - 858615
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  858705 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtgc 858615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 273
Target Start/End: Complemental strand, 2119557 - 2119456
Alignment:
Q  173 tacataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2119557 tacataaaaggaaattgtttttgactttattataaattaattactcaatttcaatgcattaactactatataatttcctttttcatatctttaaccagtg 2119458  T
Q  272 cc 273  Q
    ||    
T  2119457 cc 2119456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 39074527 - 39074419
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggtt 289  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||   |||||||||    
T  39074527 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtg-ccccgggggcaccggtt 39074429  T
Q  290 agcatttccc 299  Q
    ||||||||||    
T  39074428 agcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 40362642 - 40362766
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| |    
T  40362642 cataaaagaaaactgtttttgactttattatcaattaattacacaattttaatgcattaactactatataatttcttttttcatatccttaatcagtg-c 40362740  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    |||| | |||| ||||||||||||||    
T  40362741 cccggaggcacgggttagcatttccc 40362766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 178 - 299
Target Start/End: Complemental strand, 52246702 - 52246582
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  52246702 aaaaaaaattgtttttgactttattataaattaattatacaatttcaatgcattaacaactatataatttcatttttcatatccttaaccagtg-ccccg 52246604  T
Q  278 aaagcaccggttagcatttccc 299  Q
     | ||||| |||||||||||||    
T  52246603 gaggcaccagttagcatttccc 52246582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 53489894 - 53489987
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53489894 gaaactgtttttgacattattataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgcccc 53489987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 13160012 - 13159897
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagc 282  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||| |  |||    
T  13160012 aaactgtttttgactttattatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaactagaaccccag-gagc 13159914  T
Q  283 accggttagcatttccc 299  Q
    |||||||||||||||||    
T  13159913 accggttagcatttccc 13159897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 29241757 - 29241658
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  29241757 aaaagaatctgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttccattttcatatccttaactggtgcccccg 29241658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 41304119 - 41304005
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||| | |    
T  41304119 gaaactgtttttgactttattatcaattaattaca--atttcaatgcattaattactatataatttcctttttcatatccttaaccactg-ccccggagg 41304023  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  41304022 caccggttagcatttccc 41304005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 7468535 - 7468438
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7468535 cataaaagaaaactgcttttgactttattataaattaattatacaatttcaatgcattaactactatataatttcctttttcatttccttaaccagtg 7468438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 175 - 274
Target Start/End: Complemental strand, 22249010 - 22248910
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  22249010 cataaaagaaaactgtttttgactttattatcaattaattacacaatttcaatacaataactactatataatttcctttttcatatccttaactagtgcc 22248911  T
Q  274 c 274  Q
    |    
T  22248910 c 22248910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 43269809 - 43269923
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||| |    
T  43269809 gaaactgtgtttgattttattataaattaattacataatttcaatgcattaactactatgtaatttcccttttcatatccttaaccagtg-ctccgaagg 43269907  T
Q  282 caccggttagcatttc 297  Q
    ||||||||| ||||||    
T  43269908 caccggttaacatttc 43269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 10617354 - 10617443
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  10617354 gaaattgtttttgactttattataaattaattacacaattttaatgcattaactactatataatttccttttttatatccttaatcagtg 10617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 18014788 - 18014695
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  18014788 gaaactgtttttaactttattatagtttaattacacaatttcaatgcattaactactatataatttactttttcatatccttaatcagtgcccc 18014695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 2505465 - 2505379
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  2505465 gaaactatttttgactttattatgaattaattacacaatttcaatgcactaactactatataatttcctttttcatatctttaacca 2505379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 11308280 - 11308396
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||| ||||||| |||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||| ||||     
T  11308280 gaaactatttttgattttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaatcagtgtcccggaaa- 11308378  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  11308379 caccggttagcatttccc 11308396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 28139417 - 28139336
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  28139417 ttttgactttattataaattaattatacaatttcaatgcattaactactatttaatttcttttttcatatccttaaccagtg 28139336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 189 - 273
Target Start/End: Complemental strand, 42548204 - 42548120
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  42548204 tttttgactttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatctttaagcagtgcc 42548120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 50299011 - 50299103
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||||| |||| ||||    
T  50299011 aaaagaaactgtttttgactttattataaattaattacacaatttcagtgcattaactactatataattttcctttttatatctttaatcagt 50299103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 49529336 - 49529432
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac---tatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||||||||| |||||||||    
T  49529336 gaaaatgtttttgactttattataaattaattacataatttcaatgcattaactactagtatataattttctttttcatatccttaatcagtgcccc 49529432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 50359257 - 50359347
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  |||||| || ||||||||||||||    
T  50359257 aaactgtttttgactttattatatattaattacccaatttcaatgcattaactactatataattttttttttcttaaccttaaccagtgcc 50359347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 24488486 - 24488389
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||| ||||||||||||||||| | || |||||||||||||||    
T  24488486 aaaagaaactgtttttgattttattatcaattaattacactatttccatgcattaactattatataatttccttttttacattcttaaccagtgcccc 24488389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 2938110 - 2938198
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||    
T  2938110 gaaattgtttttgactttattataaattaatcacacaatttcagtgcattaactactatataattttcttttttatatctttaaccagt 2938198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 38852332 - 38852246
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcatta---actactatataatttcctttttcatatccttaac 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||| |||||||||||    
T  38852332 aaactgtttttgactttattataaattaattacacaatttcaatgcattaattactactatataatttcattttttatatccttaac 38852246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 41993689 - 41993773
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaac 266  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||    
T  41993689 gaaactgtttttaactttattataaattaattacataatttcaatgcattaactactatataatttcatttttaatatacttaac 41993773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 50395640 - 50395721
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||||||    
T  50395640 ttttgactttattatcaattaattacacaatttctatgcattaactactgtataattttctttttcatatccctaaccagtg 50395721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 176 - 260
Target Start/End: Complemental strand, 31514913 - 31514829
Alignment:
Q  176 ataaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatc 260  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||  |||||||||||    
T  31514913 ataaaaaaaattgtttttgattttattataaattaattacacaattttaatacattaactactatataattttatttttcatatc 31514829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 33141009 - 33140937
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatt 246  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33141009 cataaaagaaaactgcttttgactttattataaattaattatacaatttcaatgcattaactactatataatt 33140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 6842735 - 6842676
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactata 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6842735 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattata 6842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 2391688 - 2391630
Alignment:
Q  217 caatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2391688 caatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgcccc 2391630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 2393449 - 2393391
Alignment:
Q  217 caatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2393449 caatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgcccc 2393391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 2362965 - 2362880
Alignment:
Q  166 ttaagcatac-ataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcct 250  Q
    |||||||||| |||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  2362965 ttaagcataccataaaagaaaactgtttttgattttattatcaattaattacactatttcaatgcattaacta-tatataatttcct 2362880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 52718252 - 52718194
Alignment:
Q  213 tacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  52718252 tacacaattttaatgtattaactactatataatttcctttttcatatccttaaccagtg 52718194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 21010113 - 21010041
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttt 254  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  21010113 aaaagaaact-tttttgacttt-ttataaattaattatacaatttcaatg--ttaactactatataatttccttttt 21010041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 52552597 - 52552549
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaatttc 223  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52552597 cataaaagatactgtttttgactttattataaattaattacacaatttc 52552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 6842642 - 6842604
Alignment:
Q  199 tattataaattaattacacaatttcaatgcattaactac 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6842642 tattataaattaattacacaatttcaatgcattaactac 6842604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 2362861 - 2362801
Alignment:
Q  238 tatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    ||||||||||||||||||||||||||||||| || | |||  ||||||||||||||||||||    
T  2362861 tatataatttcctttttcatatccttaaccattg-caccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 23925359 - 23925303
Alignment:
Q  219 atttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||| |||||||||| |||||||||||||||||||| |||| |||||||||| ||||    
T  23925359 attttaatgcattaattactatataatttccttttttatattcttaaccagttcccc 23925303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 53054918 - 53054834
Alignment:
Q  184 aactgtttttgactttattataaattaattacacaatttcaatgcatt---aactactatataatttcctttttcatatccttaa 265  Q
    |||| |||||| |||||||||| || ||||||||||| ||||||||||   || |||||||||||||| || |||||||| ||||    
T  53054918 aactatttttggctttattatagataaattacacaatctcaatgcattaagaattactatataatttcattattcatatcattaa 53054834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 25743918 - 25743854
Alignment:
Q  190 ttttgactttattataaattaattacacaatttc-aatgcattaactactatataatttccttttt 254  Q
    |||||||||| |||| |||||||||||||||||  |||||| ||| ||||||||||||||||||||    
T  25743918 ttttgacttt-ttatgaattaattacacaatttttaatgcaataattactatataatttccttttt 25743854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 34300680 - 34300775
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaa-tttcaatgcattaactactatataatttcctttttcat-atccttaaccagtgcc 273  Q
    |||||||||| || |||||||| |||| |||| ||||||||| |||||||| | |||||||| ||||||||| ||||| || ||||||||||||||||    
T  34300680 aaaagaaact-ttgttgacttt-ttatgaattgattacacaactttcaatgtaataactactgtataatttcattttttattatccttaaccagtgcc 34300775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 17752783 - 17752707
Alignment:
Q  201 ttataaattaattacacaa-tttcaatgcattaactactatataattt-cctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||| |||||| ||| ||| |||||||| |||| || ||||  |||||||||||||||||||    
T  17752783 ttataaattaattacacaattttcaacgcaataaatactatatgatttaccattttagtatccttaaccagtgcccc 17752707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 19054103 - 19054027
Alignment:
Q  201 ttataaattaattacacaa-tttcaatgcattaactactatataattt-cctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||||||| |||||| ||| ||| |||||||| |||| || ||||  |||||||||||||||||||    
T  19054103 ttataaattaattacacaattttcaacgcaataaatactatatgatttaccattttagtatccttaaccagtgcccc 19054027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 6842674 - 6842636
Alignment:
Q  203 ataaattaattacacaatttcaatgcattaactactata 241  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  6842674 ataaattaattacacaatttcaatgaattaactattata 6842636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 16990728 - 16990789
Alignment:
Q  207 attaattacacaatttcaatgcattaactactatataatttcctttttcat-atccttaacc 267  Q
    |||||||||||| ||| |||||| |||||| ||| ||||||||||||| || ||||||||||    
T  16990728 attaattacacatttttaatgcaataactattatctaatttccttttttatcatccttaacc 16990789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 26966588 - 26966523
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttcctttttca-tatccttaaccagt 270  Q
    |||||||| ||||||| ||||||| |||||||||||||||||| ||||| | ||||||||| ||||    
T  26966588 attaattaaacaattttcaatgcaataactactatataatttctttttttagtatccttaatcagt 26966523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 27994394 - 27994463
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||||||| ||||| || | |||||| ||||||| |||||| |||||  |||||||||||||||||||    
T  27994394 attaattacataattttcactacattaattactataaaatttcttttttagtatccttaaccagtgcccc 27994463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 31436386 - 31436313
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaa-tttcaatgcattaactactatataattt 247  Q
    ||||||||||| | || |||||||  |||| |||||||||||||| ||| |||||| ||| |||||||||||||    
T  31436386 cataaaagaaaattttgttgacttatttatgaattaattacacaatttttaatgcaataattactatataattt 31436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 40614523 - 40614474
Alignment:
Q  206 aattaattacacaattt-caatgcattaactactatataatttccttttt 254  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  40614523 aattagttacacaattttcaatgcaataactactatataatttccctttt 40614474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 2350768 - 2350654
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  ||    
T  2350768 gaaactatttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtg-ccccgggag 2350670  T
Q  282 caccggttagcatttc 297  Q
    ||||||||||||||||    
T  2350669 caccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 1391240 - 1391363
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  1391240 cataaaagaaaactgtttttgactttattataaattaattatacaatttcaatgcattaactactatataatttcctttttcatatccttaatcagtacc 1391339  T
Q  274 cccgaaagcaccggttagcatttccc 299  Q
    || |  ||||||||||||||||||||    
T  1391340 ccgg--agcaccggttagcatttccc 1391363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 392212 - 392096
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||   |    
T  392212 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtg-ccccggggg 392114  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  392113 caccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 164 - 299
Target Start/End: Complemental strand, 20898084 - 20897948
Alignment:
Q  164 ggttaagcatac-ataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 261  Q
    |||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20898084 ggttaagcataccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 20897985  T
Q  262 ttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||||||||  |   |||||||||||||||||||    
T  20897984 ttaaccagtgccctgggg-gcaccggttagcatttccc 20897948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 178 - 299
Target Start/End: Original strand, 21878413 - 21878533
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccg 277  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |    
T  21878413 aaaagaaactgtttttgactttattataaattaattaaataatttcaatgcattaactactatataatttcctttttcatatccttaacccgtg-cccgg 21878511  T
Q  278 aaagcaccggttagcatttccc 299  Q
     | |||||||||||||||||||    
T  21878512 gaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 23402254 - 23402138
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | |    
T  23402254 gaaactgtttttgactttattataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtg-ccccggagg 23402156  T
Q  282 caccggttagcatttccc 299  Q
    |||| |||||||||||||    
T  23402155 caccagttagcatttccc 23402138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 18276685 - 18276777
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18276685 gaaactgtttttgactttattataaattaattacacaaattcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 18276777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 34477600 - 34477712
Alignment:
Q  164 ggttaagcatac-ataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 261  Q
    |||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34477600 ggttaagcataccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 34477699  T
Q  262 ttaaccagtgccc 274  Q
    |||||||||||||    
T  34477700 ttaaccagtgccc 34477712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 12145187 - 12145277
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12145187 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtgc 12145277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 3515882 - 3515766
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |   |    
T  3515882 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccctgggg-g 3515784  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  3515783 caccggttagcatttccc 3515766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 26467194 - 26467287
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26467194 gaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgcccc 26467287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 34396597 - 34396682
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34396597 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 34396682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 29451185 - 29451300
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| | |    
T  29451185 gaaactgtgtttgactttattataatttaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtg--cccggagg 29451282  T
Q  282 caccggttagcatttccc 299  Q
    |||| |||||||||||||    
T  29451283 caccagttagcatttccc 29451300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 32985263 - 32985376
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || ||||||  |    
T  32985263 gaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccaatg-ccccgaggg 32985361  T
Q  282 caccggttagcattt 296  Q
    |||||||| ||||||    
T  32985362 caccggtttgcattt 32985376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 7851229 - 7851345
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||  |   |    
T  7851229 gaaactgtttttgactttattataaattaattacacaattttaatgcattaattactatataattttctttttcatatccttaaccagtgccctgggg-g 7851327  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  7851328 caccggttagcatttccc 7851345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 32929578 - 32929694
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| || |||||   |    
T  32929578 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaattaatatataatttcctttttcatacccttaaccattg-ccccggggg 32929676  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  32929677 caccggttagcatttccc 32929694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 4215811 - 4215718
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||    
T  4215811 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgcccc 4215718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 12525835 - 12525719
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||  ||||| | |    
T  12525835 gaaactgtgtttgacattattataaattaattacacattttcaatgtattaactactatataatttcctttttcatacccttaaccagt-accccggagg 12525737  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  12525736 caccggttagcatttccc 12525719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 27433608 - 27433492
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||   |    
T  27433608 gaaactatttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtg-ccccggggg 27433510  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  27433509 caccggttagcatttccc 27433492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 199 - 299
Target Start/End: Complemental strand, 13529554 - 13529455
Alignment:
Q  199 tattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttcc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||  ||||||||||||    
T  13529554 tattataaattaattacacaatttcaatgcattaactactatataatttcctttttcacatccttaaccagtg-ccccgaaggcacaagttagcatttcc 13529456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 25165475 - 25165569
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 268  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  25165475 cataaaagaaaactgtttttgactttattataaattaattacacaatttcaatatattaactactatataatttcttttttcatatccttaacca 25165569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 23629646 - 23629739
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  23629646 gaaattgtttttgactttattataaagtaattacacaatttcaatacattaactactatataattttctttttcatatccttaatcagtgcccc 23629739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 35044013 - 35043917
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  35044013 cataaaagaaaactgtttttgactttattataaattaat-acacaatttcaatgaattaactactatataatttcttttttcatatccttaaccagtg 35043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 3026080 - 3026171
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  3026080 aaactgtttttgacattattataaattaattatacaatttcaatgcattaactactgtataatttcatttttcatacccttaaccagtgccc 3026171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 2581061 - 2580952
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggt 288  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||  || | |  ||||||||    
T  2581061 tttttgactttattataaattaattacataatttcaatgcattaactactatataatttccttttttatatcattaaccagt-acctcaagggcaccggt 2580963  T
Q  289 tagcatttccc 299  Q
    |||||||||||    
T  2580962 tagcatttccc 2580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 34851926 - 34852030
Alignment:
Q  189 tttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggt 288  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| |  |||||||||    
T  34851926 tttttgactttattataaatcaattacacaatttcaatgcattaactactatataatttcctttttcatatctttaa-cagtgtcccag-gagcaccggt 34852023  T
Q  289 tagcatt 295  Q
    |||||||    
T  34852024 tagcatt 34852030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 175 - 274
Target Start/End: Original strand, 13417021 - 13417124
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttat---tataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||| ||||||||||||||||   ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||    
T  13417021 cataaaagaaaactgtttttgactttattattataaattaattacacaatttcaatacattaactaatatataatttcctttttcatatccttaactagt 13417120  T
Q  271 gccc 274  Q
    ||||    
T  13417121 gccc 13417124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 29978347 - 29978233
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagc 282  Q
    ||||||||||||||||||||||||||  |||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||   ||| | ||    
T  29978347 aaactgtttttgactttattataaatatattacataatttcaatacattaaatactatataatttcctttttcatatccttaactagtg--tccggaggc 29978250  T
Q  283 accggttagcatttccc 299  Q
    |||||||||||||||||    
T  29978249 accggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 31280437 - 31280321
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||| ||||| || ||  ||    
T  31280437 gaaaccgtttttgacattattataaattaattatacaatttcaatgcattaactactatataatttcctttttcattctcttaatcagtg-cctcgggag 31280339  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  31280338 caccggttagcatttccc 31280321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 28225344 - 28225252
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  28225344 cataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattactatataa-ttcctttttcatatccttaacc 28225252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 11115159 - 11115256
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| || |||||||  |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  11115159 cataaaagaaaactatttttga--ttattataaattaattacacaatttcaatgtattaactattatataatttccttttttatatccttaaccagtgcc 11115256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 1840317 - 1840407
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||||| || ||||||||||| ||||| |||||||||||||||||    
T  1840317 gaaactgtttttaactttattataaattaattacacaattttaatacattaattattatataatttctttttttatatccttaaccagtgc 1840407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 9661102 - 9660988
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||| |||| |||||||| ||||||||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||  ||| || |||  |    
T  9661102 gaaactgcttttaactttattttaaattaattatacaatttcaatgcattaactattatgtaatttcttttttcatatccttaactggtg-ccacgaggg 9661004  T
Q  282 caccggttagcatttc 297  Q
    ||||||||||||||||    
T  9661003 caccggttagcatttc 9660988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 961125 - 961051
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttca 256  Q
    |||| ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  961125 gaaattgtttctgactttattatcaattaattacacaattttaatgcattaactactatataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 5323516 - 5323426
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||| |||| ||||| ||||||    
T  5323516 gaaattgtttttgactttattataaattaattacataattttaatgctttaattactatataatttccttttttatattcttaatcagtgc 5323426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 1127940 - 1127817
Alignment:
Q  175 cataaaagaaactgtttttgactttattataaattaattacacaa-tttcaatgcattaactactatataattt-cctttttcatatccttaaccagtgc 272  Q
    ||||||| ||| | || |||||||  |||||||||||||| |||| |||||||||| ||| ||  ||||||||| |||||||  ||||||||||| ||||    
T  1127940 cataaaaaaaagttttgttgacttatttataaattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccggtgc 1127841  T
Q  273 ccccgaaagcaccggttagcatttc 297  Q
    |||||  ||||| ||||||||||||    
T  1127840 ccccg-gagcactggttagcatttc 1127817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 14559993 - 14559922
Alignment:
Q  227 gcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||||| |||||| |||| ||||||||||| |||| ||||  ||||||| |||||||||||||||||||    
T  14559993 gcattaactattatatattttcttttttcatatctttaatcagt-tccccgaaggcaccggttagcatttccc 14559922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 11634028 - 11633951
Alignment:
Q  189 tttttgactttattataaattaattacacaattt-caatgcattaactactatataatttcctttttcatatccttaa 265  Q
    |||||||| || ||||  |||||||||||||||| ||||||| |||||||||||||||| | |||||  |||||||||    
T  11634028 tttttgacatttttatgtattaattacacaattttcaatgcaataactactatataattacttttttagtatccttaa 11633951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 10431827 - 10431780
Alignment:
Q  207 attaattacacaatttcaatgcattaactactatataatttccttttt 254  Q
    ||||||||||||||||||||| | |||||| ||||||||||| |||||    
T  10431827 attaattacacaatttcaatgtaataactattatataatttctttttt 10431780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 3246181 - 3246247
Alignment:
Q  207 attaattacacaatttc-aatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||||||||  |||||| ||| |||| |||||||||||||||  ||||||||| ||||||    
T  3246181 attaattacacaatttttaatgcaataattactgtataatttcctttttagtatccttaatcagtgc 3246247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 34706813 - 34706720
Alignment:
Q  207 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||| |||||||||   |||||||||||||||||||    
T  34706813 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccggtgcccccggg-gcaccggttagcatttccc 34706720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 11616208 - 11616285
Alignment:
Q  189 tttttgactttattataaattaattacacaattt-caatgcattaactactatataatttcctttttcatatccttaa 265  Q
    |||||||| || ||||  |||||||| ||||||| ||||||| |||||||||||||||| | |||||  |||||||||    
T  11616208 tttttgacatttttatgtattaattatacaattttcaatgcaataactactatataattacttttttagtatccttaa 11616285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 34712252 - 34712312
Alignment:
Q  239 atataatttcctttttcat-atccttaaccagtgcccccgaaagcaccggttagcatttccc 299  Q
    ||||||||||| |||| || |||||||||||||| ||||| | |||||||||||||||||||    
T  34712252 atataatttccctttttattatccttaaccagtg-ccccggaggcaccggttagcatttccc 34712312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 7947 - 8059
Alignment:
Q  164 ggttaagcatac-ataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 261  Q
    |||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7947 ggttaagcataccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 8046  T
Q  262 ttaaccagtgccc 274  Q
    |||||||||||||    
T  8047 ttaaccagtgccc 8059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 164 - 274
Target Start/End: Complemental strand, 7424 - 7312
Alignment:
Q  164 ggttaagcatac-ataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 261  Q
    |||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7424 ggttaagcataccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcc 7325  T
Q  262 ttaaccagtgccc 274  Q
    |||||||||||||    
T  7324 ttaaccagtgccc 7312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 23086 - 22961
Alignment:
Q  174 acataaaag-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  23086 acataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaattactatataatttcctttttcatatccttaaccagtgc 22987  T
Q  273 ccccgaaagcaccggttagcatttccc 299  Q
     || |   |||||||||||||||||||    
T  22986 tccgggg-gcaccggttagcatttccc 22961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 182 - 298
Target Start/End: Original strand, 6180 - 6295
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |   |    
T  6180 gaaactgtttttgactttattataatttaattacacaattccaatgcattaactactatatagtttcctttttcatatccttaaccagtgccccag-ggg 6278  T
Q  282 caccggttagcatttcc 298  Q
    |||||||||||||||||    
T  6279 caccggttagcatttcc 6295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 933 - 825
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggtt 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||| ||||||||| |    
T  933 ttttgactttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaactagtg-ctccggaagcaccggct 835  T
Q  290 agcatttccc 299  Q
    ||||||||||    
T  834 agcatttccc 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 11021 - 11129
Alignment:
Q  165 gttaagcatac-ataaaa-gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcct 262  Q
    ||||||||||| |||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11021 gttaagcataccataaaatgaaactgtttttgactttattatagtttaattacacaatttcaatgcattaactaatatataatttcctttttcatatcct 11120  T
Q  263 taaccagtg 271  Q
    |||||||||    
T  11121 taaccagtg 11129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 183 - 299
Target Start/End: Original strand, 146976 - 147091
Alignment:
Q  183 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagc 282  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||| |  |||    
T  146976 aaactgtttttgactttattatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaactagaaccccag-gagc 147074  T
Q  283 accggttagcatttccc 299  Q
    |||||||||||||||||    
T  147075 accggttagcatttccc 147091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 116320 - 116207
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||   |    
T  116320 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatctttaacctgtg-ccccggggg 116222  T
Q  282 caccggttagcattt 296  Q
    |||||||||||||||    
T  116221 caccggttagcattt 116207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 15012 - 14896
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| |  |     
T  15012 gaaactgtttttgactttattataaattaactacacaatttcagtgcattaactactatataatttctttttttatatctttaaccagtgccccgggga- 14914  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  14913 caccggttagcatttccc 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 53755 - 53871
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaag 281  Q
    |||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||   |    
T  53755 gaaactatttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtg-ccccggggg 53853  T
Q  282 caccggttagcatttccc 299  Q
    ||||||||||||||||||    
T  53854 caccggttagcatttccc 53871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 408 - 316
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  408 gaaactgtttttgactttattataaatttattacacaatttcaatgcattaactattatataattttctttttcatatgcttaaccagtgccc 316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 53421 - 53505
Alignment:
Q  187 tgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 271  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53421 tgtttttgactttattataaattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtg 53505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 50656 - 50548
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccccgaaagcaccggtt 289  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||| ||||| | |||||||||    
T  50656 ttttgactttattataaattaattatacaatttcaaaacattaactactatataatttcctttttcatatctttaaccagtg-ccccggaggcaccggtt 50558  T
Q  290 agcatttccc 299  Q
    | ||||||||    
T  50557 aacatttccc 50548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 175 - 272
Target Start/End: Complemental strand, 802 - 704
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  802 cataaaagaaaacagtttttgactttattataaattaattacacaatttcaatggattaactactatataatttcctttttcatatctttaacccgtgc 704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 68360 - 68453
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 275  Q
    ||||||| |||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  68360 gaaactgattttaactttattataatttatttacacaattttaatgcattaactactatataatttcatttttcatatccttaaccagtgcccc 68453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 69346 - 69250
Alignment:
Q  178 aaaagaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 274  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  69346 aaaaaaaactgcttttgactttattataaattaattacataattttaatgtattaactactatataatttactttttcatatccttaacgagtgccc 69250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 33770 - 33841
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 272  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| |||| |||| |||||| |||||    
T  33770 ttataaattaattacacaatttcaatgtattaactattatataatttccattttaatatacttaacaagtgc 33841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 17533 - 17631
Alignment:
Q  175 cataaaagaaa-ctgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 273  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||| |||||||    
T  17533 cataaaagaaaactgtttttgactttattataaattaatt-cacaatttcaatgcattagctactatataattttctttttcatatccgtaaacagtgcc 17631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 19655 - 19740
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||| |||||||    
T  19655 gaaactgtttttgactttattataaattcattacacaatttcaatgcattaattattatataatttcttttttcatatgcttaacc 19740  T

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Target: scaffold0038 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 25842 - 25750
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  25842 cataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattactatataa-ttcctttttcatatccttaacc 25750  T

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Target: scaffold0113 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 41035 - 40952
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaa 265  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  41035 gaaactgtttttgacttcattataaattaattacataatttcaatgcattaactattatataatttcatttttcatattcttaa 40952  T

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Target: scaffold0034 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 95662 - 95742
Alignment:
Q  190 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| || |||||||||||||||||||||| ||||||||||    
T  95662 ttttgactttattataaattaattacataatttcaattcattaattattatataatttcctttttcatattcttaaccagt 95742  T

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Target: scaffold0425 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 10826 - 10771
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10826 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac 10771  T

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Target: scaffold0007 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 233969 - 233918
Alignment:
Q  182 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaa 233  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  233969 gaaactgcttttgactttattataaattaattacacaatttcaatgaattaa 233918  T

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Target: scaffold0533 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 5136 - 5070
Alignment:
Q  201 ttataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 267  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||  ||||| |||| |||||||    
T  5136 ttataaattaattacacaatttcaataaattaactactatataattttttttttaatattcttaacc 5070  T

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Target: scaffold1128 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 1462 - 1415
Alignment:
Q  207 attaattacacaatttcaatgcattaactactatataatttccttttt 254  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  1462 attaattacacaatttcaatgcaataactattatataatttctttttt 1415  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 74535 - 74632
Alignment:
Q  175 cataaaagaaact-gtttttgactttattataaattaattacacaatttcaatgcattaact-actatataatttcctttttcatatccttaaccagt 270  Q
    ||||||||||| | |||||| | |||||||| ||||||||| ||||||||| | |||||| | ||||||||||||  ||||||||||| |||| ||||    
T  74535 cataaaagaaatttgttttttaatttattatcaattaattatacaatttcactacattaatttactatataattttttttttcatatctttaatcagt 74632  T

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