View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11708_high_25 (Length: 242)

Name: NF11708_high_25
Description: NF11708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11708_high_25
NF11708_high_25
[»] chr4 (16 HSPs)
chr4 (5-186)||(10755002-10755188)
chr4 (5-186)||(10968771-10968957)
chr4 (1-151)||(10970446-10970601)
chr4 (5-151)||(10757279-10757430)
chr4 (2-140)||(27789083-27789229)
chr4 (1-186)||(23878743-23878934)
chr4 (5-140)||(23882395-23882537)
chr4 (105-186)||(722875-722956)
chr4 (77-186)||(22751834-22751942)
chr4 (148-225)||(12324818-12324902)
chr4 (93-186)||(20494706-20494799)
chr4 (44-140)||(22763078-22763176)
chr4 (41-140)||(7202741-7202842)
chr4 (43-140)||(28924663-28924763)
chr4 (105-152)||(726449-726496)
chr4 (77-140)||(30953280-30953345)
[»] scaffold1778 (1 HSPs)
scaffold1778 (5-186)||(877-1063)
[»] chr1 (17 HSPs)
chr1 (5-186)||(15157986-15158172)
chr1 (5-182)||(19749554-19749736)
chr1 (1-146)||(15142600-15142750)
chr1 (5-186)||(24280851-24281038)
chr1 (5-151)||(19751780-19751931)
chr1 (5-186)||(20442544-20442731)
chr1 (5-151)||(36910420-36910571)
chr1 (4-153)||(20435184-20435328)
chr1 (5-139)||(20514405-20514546)
chr1 (5-139)||(24276784-24276925)
chr1 (5-139)||(12020180-12020321)
chr1 (106-186)||(555328-555408)
chr1 (5-139)||(18433227-18433364)
chr1 (41-186)||(20194925-20195071)
chr1 (106-186)||(19913718-19913798)
chr1 (76-186)||(33295689-33295798)
chr1 (106-164)||(546065-546123)
[»] chr8 (30 HSPs)
chr8 (5-225)||(20134805-20135031)
chr8 (5-186)||(21408397-21408583)
chr8 (5-186)||(21802889-21803075)
chr8 (5-186)||(14673401-14673586)
chr8 (5-195)||(3300127-3300323)
chr8 (5-151)||(21834860-21835011)
chr8 (5-151)||(14676607-14676758)
chr8 (5-151)||(3303194-3303345)
chr8 (5-187)||(31708941-31709128)
chr8 (5-140)||(36281244-36281384)
chr8 (5-139)||(31711161-31711301)
chr8 (5-153)||(20131752-20131908)
chr8 (5-186)||(14366177-14366356)
chr8 (44-186)||(2277-2418)
chr8 (41-186)||(17007863-17008009)
chr8 (41-186)||(17540941-17541087)
chr8 (105-186)||(26908449-26908530)
chr8 (105-183)||(18973331-18973409)
chr8 (105-186)||(25502719-25502800)
chr8 (5-154)||(14369766-14369913)
chr8 (5-153)||(14370317-14370463)
chr8 (106-169)||(25548052-25548115)
chr8 (6-95)||(21938648-21938742)
chr8 (41-124)||(44754261-44754344)
chr8 (44-140)||(753411-753508)
chr8 (95-139)||(21945924-21945968)
chr8 (105-151)||(18977846-18977892)
chr8 (105-151)||(25560321-25560367)
chr8 (105-151)||(26905214-26905260)
chr8 (77-140)||(32231449-32231514)
[»] chr7 (22 HSPs)
chr7 (5-225)||(44357040-44357266)
chr7 (5-186)||(23532419-23532606)
chr7 (5-186)||(15932193-15932379)
chr7 (5-186)||(11527363-11527549)
chr7 (5-153)||(44360160-44360316)
chr7 (5-139)||(11544768-11544908)
chr7 (94-186)||(362055-362147)
chr7 (55-139)||(23517841-23517927)
chr7 (105-183)||(12538389-12538467)
chr7 (105-186)||(15834898-15834979)
chr7 (105-186)||(37282813-37282896)
chr7 (94-165)||(357345-357416)
chr7 (106-186)||(5332462-5332542)
chr7 (43-140)||(9214540-9214638)
chr7 (93-185)||(6198784-6198872)
chr7 (105-153)||(12529368-12529416)
chr7 (39-100)||(11100223-11100285)
chr7 (105-151)||(21627507-21627553)
chr7 (105-151)||(37278662-37278708)
chr7 (127-186)||(783721-783777)
chr7 (77-140)||(6202041-6202106)
chr7 (77-140)||(30096785-30096850)
[»] chr3 (35 HSPs)
chr3 (5-186)||(8856869-8857046)
chr3 (5-186)||(18556682-18556870)
chr3 (5-151)||(8854057-8854208)
chr3 (5-151)||(26900539-26900690)
chr3 (43-186)||(26907113-26907256)
chr3 (5-186)||(17593716-17593904)
chr3 (5-183)||(16082706-16082891)
chr3 (5-186)||(103312-103499)
chr3 (5-186)||(10776778-10776964)
chr3 (5-151)||(17601724-17601877)
chr3 (39-186)||(15417803-15417950)
chr3 (76-186)||(20012389-20012499)
chr3 (5-186)||(14566168-14566352)
chr3 (5-139)||(94496-94637)
chr3 (5-151)||(16091882-16092035)
chr3 (5-140)||(8368205-8368347)
chr3 (43-186)||(12209017-12209160)
chr3 (41-186)||(15926629-15926775)
chr3 (105-197)||(33484754-33484847)
chr3 (94-182)||(2689138-2689226)
chr3 (94-198)||(11137131-11137238)
chr3 (78-144)||(20008610-20008676)
chr3 (5-140)||(14561027-14561168)
chr3 (84-140)||(12206649-12206706)
chr3 (39-153)||(14789661-14789776)
chr3 (106-183)||(19808294-19808371)
chr3 (77-186)||(14429933-14430040)
chr3 (5-95)||(38700208-38700303)
chr3 (8-95)||(10815905-10815997)
chr3 (94-151)||(11133947-11134004)
chr3 (5-95)||(10813004-10813099)
chr3 (39-152)||(19767616-19767730)
chr3 (94-151)||(2692813-2692870)
chr3 (132-186)||(10815811-10815867)
chr3 (94-151)||(19790105-19790162)
[»] chr6 (21 HSPs)
chr6 (5-198)||(8650086-8650284)
chr6 (5-151)||(8668116-8668267)
chr6 (5-145)||(16688593-16688738)
chr6 (5-153)||(22467573-22467726)
chr6 (5-186)||(19577189-19577379)
chr6 (5-186)||(11231345-11231531)
chr6 (5-151)||(19573604-19573757)
chr6 (5-151)||(20090415-20090567)
chr6 (5-151)||(23606959-23607111)
chr6 (5-139)||(19011614-19011755)
chr6 (94-186)||(4282699-4282791)
chr6 (94-183)||(11694869-11694958)
chr6 (105-186)||(34336039-34336120)
chr6 (5-71)||(19019315-19019386)
chr6 (106-186)||(22622504-22622584)
chr6 (42-103)||(13727255-13727317)
chr6 (5-73)||(19008533-19008606)
chr6 (94-152)||(4279451-4279509)
chr6 (39-100)||(17996840-17996902)
chr6 (105-151)||(26460048-26460094)
chr6 (5-73)||(18929433-18929506)
[»] chr2 (15 HSPs)
chr2 (5-183)||(29603690-29603874)
chr2 (5-151)||(7310827-7310978)
chr2 (5-151)||(5771894-5772045)
chr2 (5-186)||(23692770-23692956)
chr2 (5-151)||(26126026-26126177)
chr2 (5-151)||(45278978-45279129)
chr2 (5-120)||(45286277-45286397)
chr2 (5-153)||(23696557-23696710)
chr2 (5-139)||(4876821-4876961)
chr2 (105-186)||(8164798-8164879)
chr2 (105-186)||(8998189-8998270)
chr2 (5-103)||(3071646-3071750)
chr2 (55-151)||(41325812-41325909)
chr2 (105-153)||(8168731-8168779)
chr2 (93-151)||(7395020-7395078)
[»] scaffold0130 (2 HSPs)
scaffold0130 (1-154)||(14921-15079)
scaffold0130 (1-186)||(18907-19078)
[»] scaffold0045 (1 HSPs)
scaffold0045 (5-186)||(78715-78901)
[»] chr5 (15 HSPs)
chr5 (5-152)||(26857381-26857533)
chr5 (5-182)||(26863602-26863776)
chr5 (5-188)||(38836792-38836981)
chr5 (2-151)||(38840708-38840862)
chr5 (5-160)||(40933242-40933404)
chr5 (5-140)||(8460203-8460345)
chr5 (5-151)||(40936637-40936790)
chr5 (106-186)||(40572212-40572292)
chr5 (41-140)||(20680114-20680216)
chr5 (126-186)||(20679850-20679908)
chr5 (105-151)||(43041974-43042020)
chr5 (77-140)||(20671143-20671208)
chr5 (93-156)||(20675682-20675744)
chr5 (93-140)||(20675366-20675414)
chr5 (105-153)||(35415788-35415836)
[»] scaffold0202 (2 HSPs)
scaffold0202 (1-151)||(10315-10470)
scaffold0202 (1-147)||(13806-13957)
[»] scaffold1505 (1 HSPs)
scaffold1505 (5-151)||(365-516)
[»] scaffold0264 (1 HSPs)
scaffold0264 (5-186)||(12914-13101)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-183)||(194633-194816)
[»] scaffold0369 (1 HSPs)
scaffold0369 (5-139)||(7590-7730)
[»] scaffold0179 (2 HSPs)
scaffold0179 (5-185)||(24872-25057)
scaffold0179 (5-140)||(27531-27673)
[»] scaffold0878 (1 HSPs)
scaffold0878 (5-139)||(4281-4421)
[»] scaffold0023 (2 HSPs)
scaffold0023 (5-189)||(146715-146905)
scaffold0023 (5-139)||(149922-150063)
[»] scaffold0071 (1 HSPs)
scaffold0071 (39-186)||(44288-44435)
[»] scaffold0208 (1 HSPs)
scaffold0208 (5-164)||(1442-1607)
[»] scaffold0076 (1 HSPs)
scaffold0076 (77-207)||(36986-37117)
[»] scaffold0139 (1 HSPs)
scaffold0139 (5-139)||(2856-2996)
[»] scaffold0013 (3 HSPs)
scaffold0013 (44-186)||(135693-135834)
scaffold0013 (41-140)||(133414-133514)
scaffold0013 (41-140)||(137943-138043)
[»] scaffold0716 (1 HSPs)
scaffold0716 (93-198)||(2259-2366)
[»] scaffold0320 (1 HSPs)
scaffold0320 (5-140)||(12061-12203)
[»] scaffold0010 (1 HSPs)
scaffold0010 (105-186)||(245305-245387)
[»] scaffold0167 (1 HSPs)
scaffold0167 (5-140)||(10407-10549)
[»] scaffold0074 (1 HSPs)
scaffold0074 (5-73)||(56527-56600)
[»] scaffold0037 (1 HSPs)
scaffold0037 (5-95)||(20539-20634)
[»] scaffold0888 (1 HSPs)
scaffold0888 (41-184)||(4146-4289)
[»] scaffold0009 (1 HSPs)
scaffold0009 (41-140)||(96209-96310)
[»] scaffold0064 (1 HSPs)
scaffold0064 (80-140)||(25713-25775)


Alignment Details
Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 10755002 - 10755188
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  10755002 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcaaggatccaatattcagtctaaaccct 10755101  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||    
T  10755102 aatagacgattcttaaccctagaatctttattgtactttttttgcaagtacagttggcgccgtctgtgggaaacggtaaaactaacc 10755188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 10968771 - 10968957
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  10968771 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcaaggatccaatattcagtctaaaccct 10968870  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||    
T  10968871 aatagacgattcttaaccctagaatctttattgtactttttttgcaagtacagttggcgccgtctgtgggaaacggtaaaactaacc 10968957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10970446 - 10970601
Alignment:
Q  1 cccttattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    |||||||||||||||||||||||||||||||| |||||     |||||||| ||||| ||||||||||||||| ||||  ||||||||||||||||||||    
T  10970446 cccttattacttggagactaagcaaccaaaacccaagcccatagaaggctacaaataccacccttgagaacacactcaaggatccaatattcagtctaaa 10970545  T
Q  96 ccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  10970546 ccctaatagacgattcttaaccctagaatctttattgtactttttctgcaagtaca 10970601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 10757279 - 10757430
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||| ||||| ||||||||||||||| ||||  ||||||||||||||||||||||||    
T  10757279 tattacttggagactaagcaaccaaaacccaagcccatagaaggctacaaataccacccttgagaacacactcaaggatccaatattcagtctaaaccct 10757378  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  10757379 aatagacgattcttaaccctagaatctttattgtactttttctgcaagtaca 10757430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 27789083 - 27789229
Alignment:
Q  2 ccttattacttggagactaagcaaccaaaactcaagcg------aaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aa 94  Q
    |||||||||||||||||||||||||| |||| |||||       ||||||||||||| ||||||||||||||||||||   |||||||| ||||||| ||    
T  27789083 ccttattacttggagactaagcaaccgaaacccaagcctaaaaaaaggctataaataccacccttgagaacactctcaagtatccaataatcagtctaaa 27789182  T
Q  95 accctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    |||||| || ||||||||||||||||||||  |||||||||||||||    
T  27789183 accctagtatacgattcttaaccctagaatcccttattgtacttttt 27789229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 23878743 - 23878934
Alignment:
Q  1 cccttattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aa 94  Q
    ||||||||||||||||||||||||||| |||| |||||     |||| ||||||||| |||||||||||||| |||||   |||||||| ||||||| ||    
T  23878743 cccttattacttggagactaagcaaccgaaacccaagctcatagaag-ctataaataccacccttgagaacagtctcaggtatccaatagtcagtctaaa 23878841  T
Q  95 acccta--atagacgattcttaaccctagaat-gcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||  ||| |||||||||||| |||||||  |||||||| |||||  ||||| ||| |||||| |||||| |||||| ||||||||||||||    
T  23878842 accctaatatacacgattcttaacactagaatctcttattgtgctttt--tgcaagtaccgttggcaccgtctgtgggaaacggtaaaactaacc 23878934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 23882395 - 23882537
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||| |||||||||| |||| |||||     |||||||||||||| ||||||||| ||||||||||   |||||||| ||| ||| ||||||    
T  23882395 tattacttggagtctaagcaaccgaaacccaagcccatagaaggctataaataccacccttgacaacactctcaggtatccaatagtcaatctaaaaccc 23882494  T
Q  99 taatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    ||||| ||||||||||||||||||||  |||||||| ||||||    
T  23882495 taatatacgattcttaaccctagaatctcttattgtgcttttt 23882537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 722875 - 722956
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  722875 acgattcttaaccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 722956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 22751834 - 22751942
Alignment:
Q  77 atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccgg 175  Q
    |||||||| | |||||||| ||||| || |||||||||||||||||||| ||||||||||||||  | ||| |||||||||||| |||| ||||||  ||    
T  22751834 atccaataataagtctaaaaccctagtatacgattcttaaccctagaatccttattgtactttt--ttcaagtacagttggcgctgtctgtgggaaaagg 22751931  T
Q  176 taaaactaacc 186  Q
    |||||||||||    
T  22751932 taaaactaacc 22751942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 12324818 - 12324902
Alignment:
Q  148 tacagttggcgccgtctatgggaaccggtaaaa------ctaacccgg-ccacacctctcaatcgcagttgagaaaacacaaacc 225  Q
    ||||||||||||||||| |||||||||||||||      ||||||||| |||||||||||||| |||||| ||||||||||||||    
T  12324818 tacagttggcgccgtctgtgggaaccggtaaaagtaaaactaacccgggccacacctctcaattgcagttcagaaaacacaaacc 12324902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 20494706 - 20494799
Alignment:
Q  93 aaaccctaatagacgattcttaa-ccctagaatgc-ttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||||| ||||||||||| ||||||||| | ||||||||||||||  |||| ||||||||||||||||| | ||||  |||||||||||||    
T  20494706 aaaccctaatatacgattcttaaaccctagaatcccttattgtacttttt--gcaagtacagttggcgccgtctgtaggaagaggtaaaactaacc 20494799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 22763078 - 22763176
Alignment:
Q  44 ctataaatatcacccttgagaacactctcatcg-atccaatattcagtctaaac-cctaatagacgattcttaaccctagaatgcttattgtacttttt 140  Q
    ||||||||| ||| ||||||| || |||||  | |||||||| ||||||||||  |||| || |||||||||||||||||||| |||||||||||||||    
T  22763078 ctataaataccactcttgagatcattctcagggcatccaataatcagtctaaaatcctagtatacgattcttaaccctagaatccttattgtacttttt 22763176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 7202842 - 7202741
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccctaatagacgattcttaaccctagaat-gcttattgtacttt 138  Q
    |||||||||||| ||| || |||| || |||||   |||||||| |||||||||| |||||||| ||||||||||||||||||||  |||||||| ||||    
T  7202842 aggctataaataccactctagagatcattctcagatatccaatagtcagtctaaaaccctaatatacgattcttaaccctagaatcccttattgtgcttt 7202743  T
Q  139 tt 140  Q
    ||    
T  7202742 tt 7202741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 28924763 - 28924663
Alignment:
Q  43 gctataaatatcacccttgagaacactctcatcg-atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaat-gcttattgtactttt 139  Q
    ||||||||||  ||| ||||||||| |||||  | |||||||| |||||||||| ||||| || |||||||||||||| |||||  ||||||||||||||    
T  28924763 gctataaatactacctttgagaacattctcaaggcatccaataatcagtctaaaaccctagtatacgattcttaaccccagaatcccttattgtactttt 28924664  T
Q  140 t 140  Q
    |    
T  28924663 t 28924663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 726449 - 726496
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacag 152  Q
    |||||||||||||||||||| ||||  ||||||||||||||| |||||    
T  726449 acgattcttaaccctagaatccttaccgtactttttctgcaagtacag 726496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 30953280 - 30953345
Alignment:
Q  77 atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    |||||||| ||||| |||| ||||| || ||||||||||||||||||||  |||||||||||||||    
T  30953280 atccaataatcagtataaaaccctagtatacgattcttaaccctagaatcccttattgtacttttt 30953345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1778 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold1778
Description:

Target: scaffold1778; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 1063 - 877
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  1063 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatccaatattcagtctaaaccct 964  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  963 aatagacgattcttaaccctagaatccttagtgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 15158172 - 15157986
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   ||||||||| |||||||||||||    
T  15158172 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatccaatatacagtctaaaccct 15158073  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  15158072 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 15157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 182
Target Start/End: Original strand, 19749554 - 19749736
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||||| || |||||     |||||||||||||| |||| ||||||||||||||    ||| ||||||||||| |||||||    
T  19749554 tattacttggagactaagcaaccaagacccaagcccatagaaggctataaataccacctttgagaacactctcgagtatctaatattcagtcaaaaccct 19749653  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaact 182  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||    
T  19749654 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaact 19749736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 15142750 - 15142600
Alignment:
Q  1 cccttattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    |||||||||||||||||||||||||||||||| |||||     |||||||||||||| |||||||||||||||||| |   ||||||||| |||||||||    
T  15142750 cccttattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactcttaagtatccaatatacagtctaaa 15142651  T
Q  96 ccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaa 146  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  15142650 ccctaatatacgattcttaaccctagaatccttattgtactttttctgcaa 15142600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 24281038 - 24280851
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||||||||||||||||||| |||||     ||||||||||||||||||||||||||||||| |||   ||| |||| ||||||| ||||||    
T  24281038 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatatcacccttgagaacactttcaagtatcgaataatcagtcttaaaccc 24280939  T
Q  99 taataga-cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    || || | ||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||| ||||||  |||||||||||||    
T  24280938 tagtataacgattcttaaccctagaatccttattgtac-ttttgtgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 24280851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 19751780 - 19751931
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||| |||||| || |||||     |||||||||||||| |||| ||||||||||||||    ||||||||||||||| |||||||    
T  19751780 tattacttggagactaagaaaccaagacccaagcccatagaaggctataaataccacctttgagaacactctcgagtatccaatattcagtcaaaaccct 19751879  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  19751880 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 19751931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 20442544 - 20442731
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    ||||||||||| |||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| ||||||||||  ||    
T  20442544 tattacttggaaactaagcaaccaaaacccaagctcatagaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaacc 20442643  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||| || |||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||| | ||||||  |||||||||||||    
T  20442644 ctagtatacgattcttaaccctagaatccttattgtac-ttttatgcaagtacagttggcgccgtttgtgggaaaaggtaaaactaacc 20442731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 36910571 - 36910420
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagcg-----aaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||| |||||||||||||||||||||||      ||||||||||||| |||| |||||||||||||||  ||   |||||| | ||||||||||    
T  36910571 tattacttggggactaagcaaccaaaactcaagcccacgaaaggctataaataccacctttgagaacactctcagggagggaatattgattctaaaccct 36910472  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  36910471 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 36910420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 20435328 - 20435184
Alignment:
Q  4 ttattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccc 98  Q
    ||||||||||||||||||||||| ||||| |||||     |||||||||||||| |||| |||||| ||          |||||||||||||||||||||    
T  20435328 ttattacttggagactaagcaactaaaacccaagcccatagaaggctataaataccaccattgagagca----------tccaatattcagtctaaaccc 20435239  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagt 153  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  20435238 taatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagt 20435184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 20514405 - 20514546
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    ||||||||||| | |||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| ||||||||||  ||    
T  20514405 tattacttggaaagtaagcaaccaaaacccaagctcatagaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaacc 20514504  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    ||| || |||||||||||||||||||| ||||||||||||||    
T  20514505 ctagtatacgattcttaaccctagaatccttattgtactttt 20514546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 24276925 - 24276784
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||||||||||||||||||| ||| |     |||||||||||||| ||||||||||||||||||||   ||| |||| ||||||| ||||||    
T  24276925 tattacttggagactaagcaaccaaaacccaaacccatagaaggctataaataccacccttgagaacactctcaagtatcgaataatcagtcttaaaccc 24276826  T
Q  99 taataga-cgattcttaaccctagaatgcttattgtactttt 139  Q
    || || | ||||||||||||||||||| ||||||||||||||    
T  24276825 tagtataacgattcttaaccctagaatccttattgtactttt 24276784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 12020321 - 12020180
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| ||||||||||  ||    
T  12020321 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaacc 12020222  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttt 139  Q
     ||  | |||||||||||||||||||| ||||||||||||||    
T  12020221 atagaatacgattcttaaccctagaatccttattgtactttt 12020180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 555408 - 555328
Alignment:
Q  106 cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  555408 cgattcttaaccctagaatctttaccgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 555328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 18433227 - 18433364
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||  ||| |||||     |||| ||||||||| ||||  ||||||||||||||   ||| |||| | |||||||| |||    
T  18433227 tattacttggagactaagcaaccggaacccaagcccatagaagactataaataccacc--tgagaacactctcaggtatctaataattagtctaaaacct 18433324  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    | || |||||||||||||||||||| ||||||||||||||    
T  18433325 agtatacgattcttaaccctagaatccttattgtactttt 18433364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 20194925 - 20195071
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcg-atccaatattcagtctaaa--ccctaatagacgattcttaaccctagaatgcttattgtactt 137  Q
    |||||||||||| || ||||||||||| |||||  | |||||||||||||||||||  ||||| || ||||||||||||| |||||| ||||||||   |    
T  20194925 aggctataaataccagccttgagaacattctcaaggcatccaatattcagtctaaaaaccctagtacacgattcttaaccatagaatccttattgt--gt 20195022  T
Q  138 tttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||| | ||| || |||||||||||||||||| ||  | |||||||||||    
T  20195023 ttttttcaagtatagttggcgccgtctatggaaaaagttaaaactaacc 20195071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 19913798 - 19913718
Alignment:
Q  106 cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||  |||  ||||||||||||||| |||||||||||||| || |||| | ||||||||||||||    
T  19913798 cgattcttaaccctagaatctttaccgtactttttctgcaagtacagttggcgccgactgtggggaacggtaaaactaacc 19913718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 33295689 - 33295798
Alignment:
Q  76 gatccaatattcagtctaaaccctaatagacgattcttaaccctagaatgct-tattgtactttttctgcaactacagttggcgccgtctatgggaaccg 174  Q
    ||||||||| |||||||||||||||  | ||||| || |||||||| || || |||||| ||||||  |||| ||||||||||||||||| ||||||  |    
T  33295689 gatccaataatcagtctaaaccctagaatacgatactgaaccctagtatcctctattgtgcttttt--gcaagtacagttggcgccgtctgtgggaaaag 33295786  T
Q  175 gtaaaactaacc 186  Q
    ||||||||||||    
T  33295787 gtaaaactaacc 33295798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 546123 - 546065
Alignment:
Q  106 cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtct 164  Q
    |||||||||||||||||||  |||  ||||||||||||||| |||||||||||||||||    
T  546123 cgattcttaaccctagaatctttaccgtactttttctgcaagtacagttggcgccgtct 546065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 20135031 - 20134805
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    ||||| ||||||||||||||||||| || |||||     |||||||||||||| |||||||||||||| |||||   ||| |||| ||||||||||  ||    
T  20135031 tattatttggagactaagcaaccaagacccaagcccatagaaggctataaataccacccttgagaaca-tctcaagtatctaataatcagtctaaaaacc 20134933  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacccggccacacct 197  Q
    ||| || |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  20134932 ctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacagttggcgccatctgtgggaaccggtaaaactaacccggccacacct 20134833  T
Q  198 ctcaatcgcagttgagaaaacacaaacc 225  Q
    ||||||||||||| ||||||||||||||    
T  20134832 ctcaatcgcagttcagaaaacacaaacc 20134805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 21408397 - 21408583
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||||||||||||||   ||||||||||||||| |||||||    
T  21408397 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatccaatattcagtcaaaaccct 21408496  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  21408497 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 21408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 21802889 - 21803075
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||||||||||||||   ||||||||||||||| |||||||    
T  21802889 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatccaatattcagtcaaaaccct 21802988  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  21802989 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 21803075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 14673401 - 14673586
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||| ||||||||||||   |||||||||||||| ||||||||    
T  14673401 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttcagaacactctcaggtatccaatattcagtataaaccct 14673500  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    || ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  14673501 aagagacgattcttaa-cctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 14673586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 3300127 - 3300323
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     ||||  |||||||| ||||||||||||||||  ||   |||||||||||||||||||||||    
T  3300127 tattacttggagactaagcaaccaaaacccaagcccatagaagagtataaataccacccttgagaacacttccaagtatccaatattcagtctaaaccct 3300226  T
Q  100 aatagacgattcttaaccc-tagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacccggccacac 195  Q
    |||| |||||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  3300227 aataaacgattcttaacccctagaatccttatggtactttttctgcaagtacagttggcgccgtctgtgggaaccggtaaaactgaccgggccacac 3300323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 21834860 - 21835011
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||||||||||||||   ||||||||||||||| |||||||    
T  21834860 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatccaatattcagtcaaaaccct 21834959  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  21834960 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 21835011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 14676607 - 14676758
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||| ||||||||||||   |||||||||||||| ||||||||    
T  14676607 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttcagaacactctcaagtatccaatattcagtataaaccct 14676706  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    || |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  14676707 aagagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 14676758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 3303194 - 3303345
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||| |||||||||| ||| |||||     |||||||||||||| ||| ||||||||||||||||   |||||||||||||||||||||||    
T  3303194 tattacttggagattaagcaaccacaacccaagctcatagaaggctataaataccacacttgagaacactctcaagtatccaatattcagtctaaaccct 3303293  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  3303294 aataaacgattcttaaccctagaatccttattgtactttttctgcaagtaca 3303345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 31708941 - 31709128
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccc 98  Q
    |||||||||||||||||||||||||||| |||||     |||| ||||||||| ||||||||||||||||||||   ||| |||| |||||||||| |||    
T  31708941 tattacttggagactaagcaaccaaaacccaagcccattgaagactataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaccc 31709040  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaaccc 187  Q
    || || ||||||||||||||||||||  ||||||||| |||| ||||| ||||||||||||||||| |||| |  ||||||||||||||    
T  31709041 tagtatacgattcttaaccctagaatctttattgtac-ttttatgcaagtacagttggcgccgtctgtggggaaaggtaaaactaaccc 31709128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 36281384 - 36281244
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||| |||||| |||||     || ||||||||||||||||||||||||||||||||   ||  |||  ||||||||||||||    
T  36281384 tattacttggagactaagcaatcaaaacccaagcccatagagggctataaatatcacccttgagaacactctcaggcatggaattatcagtctaaaccct 36281285  T
Q  100 aatagacgattcttaaccctagaatgcttattgtacttttt 140  Q
    |||||||||||||||||||||||||  ||||| ||||||||    
T  36281284 aatagacgattcttaaccctagaatcattattatacttttt 36281244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 31711161 - 31711301
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| ||||||| ||||||    
T  31711161 tattacttggagactaagcaaccaaaacccaagctcattgaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaccc 31711260  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    || || |||||||||||||||| |||  |||||||||||||    
T  31711261 tagtatacgattcttaaccctaaaatctttattgtactttt 31711301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 20131908 - 20131752
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa---c 96  Q
    ||||| ||||||||||||||||||| || |||||     |||| ||||||||| ||||||||||||||||||||   ||| |||| ||||||||||   |    
T  20131908 tattatttggagactaagcaaccaagacccaagcccatagaagactataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaacc 20131809  T
Q  97 cctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagt 153  Q
    |||| || |||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  20131808 cctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacagt 20131752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 14366177 - 14366356
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagcg-----aaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccc 98  Q
    |||||||||||||||||||||||||||  |||||      ||||||||||||| ||||||||||||||||||||   ||  ||||  ||||| ||| |||    
T  14366177 tattacttggagactaagcaaccaaaatccaagcccatataaggctataaataccacccttgagaacactctcaagtatgtaataaacagtcaaaaaccc 14366276  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||| |||||||        ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  14366277 taatatacgattc--------agaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 14366356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 2418 - 2277
Alignment:
Q  44 ctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccctaatagacgattcttaaccctagaat-gcttattgtactttttct 142  Q
    ||||||||| ||| || |||| || |||||   |||||||| |||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||  |    
T  2418 ctataaataccactctagagatcattctcaagcatccaataatcagtcaaaaccctaatatacgattcttaaccctagaatcacctattgtactttt--t 2321  T
Q  143 gcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||| ||||||||||||||||| ||||||  |||||||||||||    
T  2320 gcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 2277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 17007863 - 17008009
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcg-atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaatgc-ttattgtactt 137  Q
    ||||||||||||  || ||||||| || |||||  | |||||||| |||||||||| ||||||||  ||||||||||||||||||| | |||||||||||    
T  17007863 aggctataaatagtactcttgagatcattctcagggcatccaataatcagtctaaaaccctaatatccgattcttaaccctagaatcccttattgtactt 17007962  T
Q  138 tttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||  |||| ||||||||| ||||||| |||||| ||||||||||||||    
T  17007963 ttt--gcaagtacagttggggccgtctgtgggaaacggtaaaactaacc 17008009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 186
Target Start/End: Complemental strand, 17541087 - 17540941
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcg-atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaatgc-ttattgtactt 137  Q
    ||||||||||||  || ||||||| || |||||  | |||||||| |||||||||| ||||||||  ||||||||||||||||||| | |||||||||||    
T  17541087 aggctataaatagtactcttgagatcattctcagggcatccaataatcagtctaaaaccctaatatccgattcttaaccctagaatcccttattgtactt 17540988  T
Q  138 tttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||  |||| ||||||||| ||||||| |||||| ||||||||||||||    
T  17540987 ttt--gcaagtacagttggggccgtctgtgggaaacggtaaaactaacc 17540941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 26908530 - 26908449
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  26908530 acgattcttaaccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 26908449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 18973331 - 18973409
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaacta 183  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  18973331 acgattcttaaccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaacta 18973409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 25502719 - 25502800
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||| |||| |  |||||||||||||    
T  25502719 acgattcttaaccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtggggagaggtaaaactaacc 25502800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 14369766 - 14369913
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtc-taaaccc 98  Q
    |||||||||||||||||||||||||||  |||||     |||||||||||||| ||||||||||||||||||||   ||| ||||  |||||  ||||||    
T  14369766 tattacttggagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaacactctcaagtatctaataaacagtcaaaaaccc 14369865  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagtt 154  Q
    ||||| |||||||        ||||| ||||||||||||||||||||| |||||||    
T  14369866 taatatacgattc--------agaatccttattgtactttttctgcaagtacagtt 14369913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 14370317 - 14370463
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtc-taaaccc 98  Q
    |||||||||||||||||||||||||||  |||||     |||||||||||||| ||||||||||||||||||||   ||| ||||  |||||  ||||||    
T  14370317 tattacttggagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaacactctcaagtatctaataaacagtcaaaaaccc 14370416  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagt 153  Q
    ||||| |||||||        ||||| ||||||||||||||||||||| ||||||    
T  14370417 taatatacgattc--------agaatccttattgtactttttctgcaagtacagt 14370463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 25548052 - 25548115
Alignment:
Q  106 cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatggg 169  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||||| ||||    
T  25548052 cgattcttaaccctagaatctttaccgtactttttctgcaagtacagttggcgccgtctgtggg 25548115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 21938648 - 21938742
Alignment:
Q  6 attacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    |||||||||||||||||||||| |||  |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| ||||||||||    
T  21938648 attacttggagactaagcaaccgaaatccaagcccatagaaggctataaataccacccttgagaacactctcaggtatctaataatcagtctaaa 21938742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 44754261 - 44754344
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccctaatagacgattcttaaccctagaat 124  Q
    |||||||||||| ||| || |||| || |||||   |||||||| |||||||||||||||||| || ||||| |||||||||||    
T  44754261 aggctataaataccactctagagatcattctcagatatccaataatcagtctaaaccctaatatacaattctgaaccctagaat 44754344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 753411 - 753508
Alignment:
Q  44 ctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    ||||||||| ||| || |||| || |||||   |||||| | |||||| ||||||||||| ||||||||||||||||||||  | |||||||||||||    
T  753411 ctataaataccactctagagatcattctcaagcatccaacaatcagtcaaaaccctaatatacgattcttaaccctagaatcacctattgtacttttt 753508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 21945924 - 21945968
Alignment:
Q  95 accctaatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    |||||| || |||||||||||||||||||| ||||||||||||||    
T  21945924 accctagtatacgattcttaaccctagaatccttattgtactttt 21945968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 18977846 - 18977892
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  18977846 acgattcttaaccctagaatccttaccgtactttttctgcaagtaca 18977892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 25560321 - 25560367
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  25560321 acgattcttaaccctagaatccttaccgtactttttctgcaagtaca 25560367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 26905260 - 26905214
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  26905260 acgattcttaaccctagaatccttaccgtactttttctgcaagtaca 26905214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 32231514 - 32231449
Alignment:
Q  77 atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    |||||||| ||| |||||| |||||||| ||||||||||||||||||||  | |||||||||||||    
T  32231514 atccaatagtcaatctaaaaccctaatatacgattcttaaccctagaatcacctattgtacttttt 32231449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 44357040 - 44357266
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    ||||| ||||||||||||||||||| || |||||     |||||||||||||| |||||||||||||| |||||   ||| |||| ||||||||||  ||    
T  44357040 tattatttggagactaagcaaccaagacccaagcccatagaaggctataaataccacccttgagaaca-tctcaagtatctaataatcagtctaaaaacc 44357138  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacccggccacacct 197  Q
    ||| || |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  44357139 ctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacagttggcgccatctgtgggaaccggtaaaactaacccggccacacct 44357238  T
Q  198 ctcaatcgcagttgagaaaacacaaacc 225  Q
    ||||||||||||| ||||||||||||||    
T  44357239 ctcaatcgcagttcagaaaacacaaacc 44357266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 23532606 - 23532419
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtcta--aacc 97  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||||||||||||||   |||||||| ||||||||  ||||    
T  23532606 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagcatccaatagtcagtctataaacc 23532507  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||||| ||||||  |||||||||||||    
T  23532506 ctaatagacgattcttaaccctagaatccttattgtac-ttttctgcaagtacagttggtgccgtctgtgggaaaaggtaaaactaacc 23532419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 15932379 - 15932193
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagcg-----aaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    ||||||||||||||||||||||||| || |||||      ||||||||||||| ||||||||||||||||||||   |||||||| ||||||| ||||||    
T  15932379 tattacttggagactaagcaaccaagacccaagcccataaaaggctataaataccacccttgagaacactctcaagtatccaataatcagtctaaaaccc 15932280  T
Q  99 taatagacgattcttaaccctagaatgc-ttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||| |||||||||||||||||||| | ||| ||| |||||  ||||| ||||||||||||||||| ||||||  |||||||||||||    
T  15932279 taatatacgattcttaaccctagaatcctttactgtgctttt--tgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 15932193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 11527363 - 11527549
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| |||||||| |||||||||||  ||||  ||| ||||||| ||||||    
T  11527363 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgggaacactctcaaggatctgataatcagtctaaaaccc 11527462  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    || || |||||||||||| ||| ||| |||||||||| |||| ||||| |||| |||||||||||| ||||||  |||||||||||||    
T  11527463 tagtatacgattcttaacactataatccttattgtac-ttttgtgcaagtacaattggcgccgtctgtgggaaaaggtaaaactaacc 11527549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 44360160 - 44360316
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa---c 96  Q
    ||||| ||||||||||||||||||| || |||||     |||| ||||||||| ||||||||||||||||||||   ||| |||| ||||||||||   |    
T  44360160 tattatttggagactaagcaaccaagacccaagcccatagaagactataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaacc 44360259  T
Q  97 cctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagt 153  Q
    |||| || |||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  44360260 cctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacagt 44360316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 11544768 - 11544908
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaac-cc 98  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| |||||||| |||||||||||  ||||  ||| ||||||||||  ||    
T  11544768 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgggaacactctcaaggatctgataatcagtctaaaatcc 11544867  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    || || |||||||||||||||||||| ||||||||||||||    
T  11544868 tagtatacgattcttaaccctagaatccttattgtactttt 11544908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 362147 - 362055
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||  |||||||||| ||||||||| ||||  ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  362147 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaaacggtaaaactaacc 362055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 23517927 - 23517841
Alignment:
Q  55 acccttgagaacactctcatcgatccaatattcagtctaaa--ccctaatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    |||||||||||||||||||   |||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||    
T  23517927 acccttgagaacactctcaagcatccaatagtcagtctaaaaaccctaatagacgattcttaaccctagaatccttattatactttt 23517841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 12538467 - 12538389
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaacta 183  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  12538467 acgattcttaaccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaacta 12538389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 15834979 - 15834898
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  15834979 acgattcttaaccctagaatctttaccgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 15834898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 37282896 - 37282813
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttct-gcaactacagttggcgccgtctatgggaac-cggtaaaactaacc 186  Q
    |||||||||||||||||||| ||||  ||||||||| | |||| ||||||||||||||||| ||||||| ||||||||||||||    
T  37282896 acgattcttaaccctagaatccttaccgtacttttttttgcaagtacagttggcgccgtctgtgggaactcggtaaaactaacc 37282813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 357416 - 357345
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtcta 165  Q
    |||||||||  |||||||||| ||||||||| ||||   |||||||||||||| ||||||||||||||||||    
T  357416 aaccctaatctacgattcttagccctagaatccttaccttactttttctgcaagtacagttggcgccgtcta 357345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 5332542 - 5332462
Alignment:
Q  106 cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||  |||  |||||||||| || | |||||||| |||||||| ||||||  |||||||||||||    
T  5332542 cgattcttaaccctagaatctttaccgtactttttcggctagtacagttgacgccgtctgtgggaagaggtaaaactaacc 5332462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 9214638 - 9214540
Alignment:
Q  43 gctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    |||||||||| ||| ||||||| || |||||  ||||  ||| ||||||||||||||| |  ||||||||||||||||||||  |||||||| ||||||    
T  9214638 gctataaataccactcttgagatcattctcaaggatcggataatcagtctaaaccctagtttacgattcttaaccctagaatctcttattgtgcttttt 9214540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 6198784 - 6198872
Alignment:
Q  93 aaaccctaatagacgattcttaaccctagaat-gcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaac 185  Q
    ||||||||||| ||||||||||| | ||||||  ||||||||||||||  ||||| |||||||||||| |||   ||||| |||||||||||||    
T  6198784 aaaccctaatatacgattcttaatcttagaatcccttattgtactttt--tgcaagtacagttggcgctgtc---gggaaacggtaaaactaac 6198872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 12529416 - 12529368
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagt 153  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||||    
T  12529416 acgattcttaaccctagaatccttaccgtactttttctgcaagtacagt 12529368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 11100223 - 11100285
Alignment:
Q  39 gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaacccta 100  Q
    |||||||||||||| |||||||| |||||||||||   |||||||| ||||||| ||||||||    
T  11100223 gaaggctataaataccacccttgggaacactctcaggtatccaataatcagtctgaaacccta 11100285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 21627507 - 21627553
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  21627507 acgattcttaaccctagaatccttaccgtactttttctgcaagtaca 21627553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 37278708 - 37278662
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  37278708 acgattcttaaccctagaatccttatcgtactttttttgcaagtaca 37278662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 783777 - 783721
Alignment:
Q  127 ttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||   |||| ||||||||||||||||| ||| || ||||||||||||||    
T  783777 ttattgtactttt---gcaagtacagttggcgccgtctgtggaaaacggtaaaactaacc 783721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 6202041 - 6202106
Alignment:
Q  77 atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    |||||||| |||||||||| |||||||| ||||||| |||||||| |||  |||||||||||||||    
T  6202041 atccaataatcagtctaaaaccctaatatacgattcataaccctataatctcttattgtacttttt 6202106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 30096785 - 30096850
Alignment:
Q  77 atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    |||| ||| |||||||||| |||||||| ||||||||||||||||||||  ||||| |||||||||    
T  30096785 atccgataatcagtctaaaaccctaatatacgattcttaaccctagaatctcttatcgtacttttt 30096850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 4e-62; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 8857046 - 8856869
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagcgaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccctaatag 104  Q
    |||||||||||||||||||||||||||||||||| |    |||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  8857046 tattacttggagactaagcaaccaaaactcaagcca----tataaataccacccttgagaacactctcaagtatccaatattcagtctaaaccctaatag 8856951  T
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  8856950 atgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 8856869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 18556682 - 18556870
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  18556682 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatccaatattcagtctaaaccct 18556781  T
Q  100 aatagacgattcttaaccctagaatgc-ttattgtactttttctgcaactacagttggcgccgtctatgg-gaaccggtaaaactaacc 186  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| |||  || ||||||||||||||    
T  18556782 aatagacgattcttaaccctagaatcctttattgtactttttctgcaagtacagttggcgccgtctgtggaaaatcggtaaaactaacc 18556870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 8854208 - 8854057
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  8854208 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatccaatattcagtctaaaccct 8854109  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  8854108 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 8854057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 26900690 - 26900539
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||| ||||||||||||||||||||||||     ||| |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  26900690 tattacttgaagactaagcaaccaaaactcaagcccatagaaagctataaataccacccttgagaacactctcaagtatccaatattcagtctaaaccct 26900591  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26900590 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 26900539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 26907256 - 26907113
Alignment:
Q  43 gctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccctaatagacgattcttaaccctagaatgcttattgtactttttct 142  Q
    |||||||||| ||| ||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26907256 gctataaataccactcttgagaacactctcaagtatccaattttcagtctaaaccctaatagacgattcttaaccctagaattcttattgtactttttct 26907157  T
Q  143 gcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||| ||||||||||||||||| ||||||  |||||||||||||    
T  26907156 gcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 26907113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 17593716 - 17593904
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccc 98  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||| ||||||||||   |||||||| |||||||||| |||    
T  17593716 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgacaacactctcagatatccaataatcagtctaaaaccc 17593815  T
Q  99 taatagacgattcttaaccctagaatgc-ttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  17593816 taatatacgattcttaaccctagaatcccttattgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 17593904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 183
Target Start/End: Original strand, 16082706 - 16082891
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    ||||||||||| ||||||||||||| || |||||     |||||||||||||| ||||||||||||||||||||   ||| ||||  |||||||||  ||    
T  16082706 tattacttggaaactaagcaaccaagacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatctaataaccagtctaaaaacc 16082805  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaacta 183  Q
    ||| || |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||    
T  16082806 ctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacagttggcgccgtctgtgggaaacggtaaaacta 16082891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 103499 - 103312
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| || |||||||||||||||||   ||| |||| ||||||||||  ||    
T  103499 tattacttggagactaagcaaccaaaacccaagcccatggaaggctataaataccatccttgagaacactctcaagtatctaataatcagtctaaaaacc 103400  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||| |||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||  |||||||||||||    
T  103399 ctaatatacgattcttaaccctagaatccttattgtac-ttttatgcaagtacagttggcgccgtctgtaggaagaggtaaaactaacc 103312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 10776964 - 10776778
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||| ||||||||||||  | |||||     ||||| |||||||| ||||||||||||||||||    ||   ||||||||||| |||||||    
T  10776964 tattacttggaggctaagcaaccaaggcccaagcccatagaaggttataaataccacccttgagaacactctagaggaggaaatattcagtcaaaaccct 10776865  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||| ||||||||||||||||| |||  |||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||    
T  10776864 aatagacaattcttaaccctagaatcctttctgtactttttctgcaagtacagatggcgccgtctgtgggaaacggtaaaactaacc 10776778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 17601724 - 17601877
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    ||||||||||||||||||||||| |||| |||||     ||||||||||||||  |||||||||||||||||||   |||||||| ||||||| ||||||    
T  17601724 tattacttggagactaagcaaccgaaacccaagcacatagaaggctataaatactacccttgagaacactctcaaatatccaataatcagtctaaaaccc 17601823  T
Q  99 taatagacgattcttaaccctagaat-gcttattgtactttttctgcaactaca 151  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  17601824 taatatacgattcttaaccctagaatcccttattgtactttttctgcaagtaca 17601877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 186
Target Start/End: Original strand, 15417803 - 15417950
Alignment:
Q  39 gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccctaatagacgattcttaaccctagaatgcttattgtactt 137  Q
    ||||| |||||||| ||||||||||||||||||||   |||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||      
T  15417803 gaaggttataaataccacccttgagaacactctcaagtatccaatagtcagtctaaaaccctaatatacgattcttaaccctagaatccttattgtac-c 15417901  T
Q  138 tttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||| |||||||||||||| || |||| |  |||||||||||||    
T  15417902 tttctgcaagtacagttggcgccgactgtggggaaaggtaaaactaacc 15417950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 20012499 - 20012389
Alignment:
Q  76 gatccaatattcagtctaaaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccgg 175  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||  ||||||||||||| | ||||||||||||||||| ||||||  ||    
T  20012499 gatccaatattgagtctaaaccctaatagacgattcttaaccctagaatctttaccgtactttttctgccagtacagttggcgccgtctgtgggaagagg 20012400  T
Q  176 taaaactaacc 186  Q
    |||||||||||    
T  20012399 taaaactaacc 20012389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 14566352 - 14566168
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||| |||| ||||||||| ||||      |||||||||||||| |||||||||||||| |||||  |||| |||  ||||||||||||||    
T  14566352 tattacttggagaataagaaaccaaaacccaagtccatagaaggctataaataccacccttgagaacaatctcaaggatcgaatgatcagtctaaaccct 14566253  T
Q  100 aatagacgattcttaaccctagaat-gcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    | || | |||||||| |||||||||  ||||||||||||||  ||||| ||||||||||||||||| |||||| ||||||||||||||    
T  14566252 agtatatgattcttagccctagaatctcttattgtactttt--tgcaagtacagttggcgccgtctgtgggaa-cggtaaaactaacc 14566168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 94637 - 94496
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    |||||||||||||||||||||||||||| |||||     |||| ||||||||| || |||||||||||||||||   ||| |||| ||||||||||  ||    
T  94637 tattacttggagactaagcaaccaaaacccaagcccatggaagactataaataccatccttgagaacactctcaagtatctaataatcagtctaaaaacc 94538  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    |||||| |||||||||||||||||||| ||||||||||||||    
T  94537 ctaatatacgattcttaaccctagaatccttattgtactttt 94496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 16091882 - 16092035
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    ||||||||||| ||||||||||||| || |||||     |||||||||||||| ||||||||||||||||||||   ||| ||||  |||||||||  ||    
T  16091882 tattacttggatactaagcaaccaagacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatctaataaccagtctaaaaacc 16091981  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||| || |||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  16091982 ctagtatacgattcttaaccctagaattcttattgtactttttatgcaagtaca 16092035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 8368347 - 8368205
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||||||||| |||| |||| |||||     |||||||||||||| ||||||||||||||||||||   |||||||| ||||||| ||| ||    
T  8368347 tattacttggagactaagtaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcaaatatccaatagtcagtctaaaatcc 8368248  T
Q  99 taatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    ||||| ||||||||||| ||||||||  |||||||||||||||    
T  8368247 taatatacgattcttaaacctagaatcccttattgtacttttt 8368205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 12209160 - 12209017
Alignment:
Q  43 gctataaatatcacccttgagaacactctcatcgatccaata-ttcagtctaaaccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    |||||||||| ||| || |||| || |||||  ||||||| | ||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||     
T  12209160 gctataaataccactctagagatcattctcaaggatccaagaattcagtctaaaccctaatatacgattcctaaccctagaatcccttattgtactttt- 12209062  T
Q  141 ctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
     ||||| || |||||||||||||| ||||||  |||||||||||||    
T  12209061 -tgcaagtatagttggcgccgtctgtgggaaaaggtaaaactaacc 12209017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 186
Target Start/End: Complemental strand, 15926775 - 15926629
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcg-atccaatattcagtctaaa--ccctaatagacgattcttaaccctagaatgcttattgtactt 137  Q
    |||||||||||| ||||||||||| || |||||  | |||||||||||||||||||  ||||| || |||||||||||||||||||| ||||||||||||    
T  15926775 aggctataaataccacccttgagagcattctcagggcatccaatattcagtctaaaaaccctagtatacgattcttaaccctagaatccttattgtactt 15926676  T
Q  138 tttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||  | ||| ||||||||||||  | | ||||||  |||||||||||||    
T  15926675 tt--ttcaagtacagttggcgctttatgtgggaaaaggtaaaactaacc 15926629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 33484847 - 33484754
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaaccc-ggccacacct 197  Q
    ||||||||||||||||||||  |||   |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  33484847 acgattcttaaccctagaatctttaccatactttttctgcaagtacagttggcgccgtctgtgggaaccggtaaaactgacccgggccacacct 33484754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 2689138 - 2689226
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaact 182  Q
    |||||||||  |||||||||||||||||||| ||||  ||||||||||| ||| ||||||||||||||||| |||||| ||||||||||    
T  2689138 aaccctaatctacgattcttaaccctagaatccttaccgtactttttctacaagtacagttggcgccgtctgtgggaaacggtaaaact 2689226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 11137238 - 11137131
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaac--cggtaaaactaacc-cggc 190  Q
    ||||||||| || |||||||| ||||||||| ||||  ||||||||||||||| ||||||||||||||||| |||||||  ||||||||||||||  |||    
T  11137238 aaccctaatcgatgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaacctcggtaaaactaacctaggc 11137139  T
Q  191 cacacctc 198  Q
    ||||||||    
T  11137138 cacacctc 11137131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 20008676 - 20008610
Alignment:
Q  78 tccaatattcagtctaaaccctaatagacgattcttaaccctagaatgcttattgtactttttctgc 144  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  |||  |||||||||||||    
T  20008676 tccaatattgagtctaaaccctaatagacgattcttaaccctagaatctttaccgtactttttctgc 20008610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 14561168 - 14561027
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||| |||||||||||||| ||||      |||||||||||||| |||||| |||||||||||||  |||| |||  ||||||||||||||    
T  14561168 tattacttggagaataagcaaccaaaacccaagtccatagaaggctataaataccaccctcgagaacactctcaaggatcgaatgatcagtctaaaccct 14561069  T
Q  100 aatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    | || | |||||||| ||||| |||  ||||||||| |||||    
T  14561068 agtatatgattcttagccctaaaatctcttattgtatttttt 14561027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 12206706 - 12206649
Alignment:
Q  84 attcagtctaaaccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  12206706 attcagtctaaaccctaatatacgattcttaaccctagaatcccttattgtacttttt 12206649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 14789776 - 14789661
Alignment:
Q  39 gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct--aaaccctaatagacgattcttaaccctagaatgcttattgtact 136  Q
    |||||||||||||| || | ||||||| ||||||||| |||||||| |||||||  ||| ||||||  |||||||| ||||||||||| ||||  ||||     
T  14789776 gaaggctataaataccatcgttgagaagactctcatctatccaataatcagtctaaaaatcctaatttacgattctcaaccctagaatccttaccgtac- 14789678  T
Q  137 ttttctgcaactacagt 153  Q
    |||||||||| ||||||    
T  14789677 ttttctgcaagtacagt 14789661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 19808371 - 19808294
Alignment:
Q  106 cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaacta 183  Q
    |||||||||||| ||||||  |||  ||||||||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  19808371 cgattcttaaccttagaatctttaccgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaacta 19808294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 14429933 - 14430040
Alignment:
Q  77 atccaatattcagtctaaaccctaatagacgattcttaaccctagaatgctt-attgtactttttctgcaactacagttggcgccgtctatgggaaccgg 175  Q
    |||||||| ||||||||||||||| |  ||||||||||| | |||||| ||| ||||| |||||   |||| ||||||||||||||||| ||||||  ||    
T  14429933 atccaataatcagtctaaaccctagtttacgattcttaatcttagaatcctttattgtgctttt---gcaagtacagttggcgccgtctgtgggaagagg 14430029  T
Q  176 taaaactaacc 186  Q
    |||||||||||    
T  14430030 taaaactaacc 14430040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 38700208 - 38700303
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagcgaa-----ggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    |||||||||||||||||||||||||||| |||||  |     ||||||||||| ||||||| |||||||||||| | ||| |||| ||||||||||    
T  38700208 tattacttggagactaagcaaccaaaacccaagcccataagaggctataaataccacccttaagaacactctcacctatcgaataatcagtctaaa 38700303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 10815997 - 10815905
Alignment:
Q  8 tacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    ||||||||||||||||||| ||||| ||||      |||||||||||||| ||||||||||||||||||||   |||||||| ||| ||||||    
T  10815997 tacttggagactaagcaactaaaacccaagtccatagaaggctataaataccacccttgagaacactctcaggtatccaataatcaatctaaa 10815905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 11134004 - 11133947
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||| ||||||||||| ||||||||| ||||  ||||||||||||||| ||||    
T  11134004 aaccctaatcgacgattcttagccctagaatccttaccgtactttttctgcaagtaca 11133947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 10813099 - 10813004
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    ||||||||| |||||||| ||||||||| |||||     |||||||||||||| | |||||||||| |||||||   |||||||| ||| ||||||    
T  10813099 tattacttgaagactaagaaaccaaaacccaagcccatagaaggctataaataccgcccttgagaatactctcaggtatccaataatcaatctaaa 10813004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 152
Target Start/End: Complemental strand, 19767730 - 19767616
Alignment:
Q  39 gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccctaatagacgattcttaaccctagaat-gcttattgtact 136  Q
    |||||||||||||| || ||||||||| ||||||    ||| |||| ||||||| ||||||||| | | |||||||||||||| |||  ||||||||||     
T  19767730 gaaggctataaataccatccttgagaagactctcgattatcgaataatcagtctaaaaccctaagatatgattcttaaccctataatcccttattgtac- 19767632  T
Q  137 ttttctgcaactacag 152  Q
    |||||||||| |||||    
T  19767631 ttttctgcaagtacag 19767616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 2692813 - 2692870
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||  |||||||||||||||||||| ||||  ||||||||||| ||| ||||    
T  2692813 aaccctaatctacgattcttaaccctagaatccttaccgtactttttctacaagtaca 2692870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 10815867 - 10815811
Alignment:
Q  132 gtactttttctgcaactacagttggcgccgtctatgggaac--cggtaaaactaacc 186  Q
    ||||||||||  ||| ||||||||||||||||| |||||||  ||||||||||||||    
T  10815867 gtactttttcgacaagtacagttggcgccgtctgtgggaacctcggtaaaactaacc 10815811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 19790105 - 19790162
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||  |||||||||||||||||||  |||  ||||||||||||||| ||||    
T  19790105 aaccctaatatgcgattcttaaccctagaatctttaccgtactttttctgcaagtaca 19790162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 6e-55; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 8650086 - 8650284
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||| ||||||||||||||||||||||||||||     |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  8650086 tattatttggagactaagcaaccaaaactcaagctcatagaaggctataaataccacccttgagaacactctcacgtatccaatattcagtctaaaccct 8650185  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaac--cggtaaaactaacc-cggccacacc 196  Q
    ||||||||||||||||||||||||| ||||   |||||||||||||| ||||||||||| ||||| |||||||  ||||||||||||||  |||||||||    
T  8650186 aatagacgattcttaaccctagaatcctta---tactttttctgcaagtacagttggcgtcgtctgtgggaacctcggtaaaactaacctaggccacacc 8650282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 8668116 - 8668267
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||| ||||||||| |||||||||||||| |||||   |||||||||||||||||||||||    
T  8668116 tattacttggagactaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaacattctcaagtatccaatattcagtctaaaccct 8668215  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  8668216 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 8668267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 16688593 - 16688738
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||| |||||||||||||  |||||     |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  16688593 tattacttggagattaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaacactctcaggcatccaatattcagtctaaaccct 16688692  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgca 145  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  16688693 aatagacgattcttaaccctagaatccttattgtactttttctgca 16688738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 22467573 - 22467726
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||| |||||||||||||| |||| |||||     |||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||    
T  22467573 tattactttgagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcaaggatcgaatattcagtctaaaccct 22467672  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagt 153  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||| ||||||    
T  22467673 aatagacgattcttaacactagaatctttattgtactttttctgcaagtacagt 22467726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 19577379 - 19577189
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctca--tcgatccaatattcagtctaaa-- 95  Q
    ||||||||||||||||||||||||| || ||||      |||||||||||||| ||||||||||||||||||||  |  || ||||| ||||||||||      
T  19577379 tattacttggagactaagcaaccaagacccaagtccatagaaggctataaataccacccttgagaacactctcaagtatatacaataatcagtctaaaaa 19577280  T
Q  96 ccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||| || ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||| |||| |  |||||||||||||    
T  19577279 ccctagtatacgattcttaaccctagaatctttattgtactttttctgcaagtacagttggcgccgtctgtgggtaatggtaaaactaacc 19577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 11231345 - 11231531
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||||| || |||||     |||| ||||||||| |||||||||||| |||||||   ||| |||||||| || |||||||    
T  11231345 tattacttggagactaagcaaccaagacccaagcccatagaagactataaataccacccttgagaagactctcagtaatctaatattcaatcaaaaccct 11231444  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    | || |||||||||||||||| |||  |||||||||||||| ||||| ||||||||||| ||||| ||||||  ||||||| |||||    
T  11231445 agtatacgattcttaaccctaaaatctttattgtactttttatgcaagtacagttggcgtcgtctgtgggaaaaggtaaaattaacc 11231531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 19573757 - 19573604
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa--cc 97  Q
    ||||||||||||||||||||||||| || |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| ||||||||||  ||    
T  19573757 tattacttggagactaagcaaccaagacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaacc 19573658  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||| || |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  19573657 ctagtatacgattcttaaccctagaatccttattgtactttttctgcaagtaca 19573604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 20090567 - 20090415
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    ||||||||||||||||||||||| |||| |||||     | |||||||||||| |||||||||||||||||||||| |||||| | ||||||| ||||||    
T  20090567 tattacttggagactaagcaaccgaaacccaagcccataggaggctataaataccacccttgagaacactctcatctatccaagaatcagtctaaaaccc 20090468  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |   | |||||||| ||||||||||| ||||||||||||||| ||||| ||||    
T  20090467 tcgcatacgattctcaaccctagaatccttattgtactttttttgcaagtaca 20090415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 23607111 - 23606959
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagt-ctaaaccc 98  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| | ||||||||||||||||||   ||| |||| |||||   ||||||    
T  23607111 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatacctcccttgagaacactctcaggtatctaataatcagtaaaaaaccc 23607012  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||  | |||||||||||||||||||| |||| |||||||||||||||| ||||    
T  23607011 tagcatacgattcttaaccctagaatccttactgtactttttctgcaagtaca 23606959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 19011755 - 19011614
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct--aaacc 97  Q
    ||||||||||| |||||| ||||||||| |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| |||||||  |||||    
T  19011755 tattacttggacactaagaaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaacc 19011656  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    |||  | |||||||||||||||||||| ||||||||||||||    
T  19011655 ctagaatacgattcttaaccctagaatccttattgtactttt 19011614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 4282791 - 4282699
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||  |||||||||| ||||||||| ||||  ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  4282791 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaaacggtaaaactaacc 4282699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 11694869 - 11694958
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaacta 183  Q
    |||||||||  |||||||||| ||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  11694869 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaacta 11694958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 34336120 - 34336039
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||| || |||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  34336120 acgattcttagccttagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 34336039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 19019386 - 19019315
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactct 71  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||    
T  19019386 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactct 19019315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 22622584 - 22622504
Alignment:
Q  106 cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||| ||||||||  |||  ||||||||||||||| ||||||||||||||||| |||| |  |||||||||||||    
T  22622584 cgattcttaatcctagaatctttaccgtactttttctgcaagtacagttggcgccgtctgtggggagaggtaaaactaacc 22622504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 13727317 - 13727255
Alignment:
Q  42 ggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccctaata 103  Q
    ||||||||||| ||||||||||||||||||||   |||||||| ||||||| |||||||||||    
T  13727317 ggctataaataccacccttgagaacactctcaggtatccaataatcagtctaaaaccctaata 13727255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 19008606 - 19008533
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctca 73  Q
    |||||||||||| |||||||||||| || |||||     |||||||||||||| |||| |||||||||||||||    
T  19008606 tattacttggaggctaagcaaccaagacccaagcccatagaaggctataaataccacctttgagaacactctca 19008533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 4279509 - 4279451
Alignment:
Q  94 aaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacag 152  Q
    |||||||||  |||||||||| ||||||||| ||||  ||||||||||||||| |||||    
T  4279509 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacag 4279451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 17996902 - 17996840
Alignment:
Q  39 gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaacccta 100  Q
    |||||||||||||| |||||||| |||||||||||   |||||||| ||||||| ||||||||    
T  17996902 gaaggctataaataccacccttgggaacactctcaggtatccaataatcagtctgaaacccta 17996840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 26460048 - 26460094
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  26460048 acgattcttaaccctagaatccttaccgtactttttctgcaagtaca 26460094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 18929506 - 18929433
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctca 73  Q
    ||||| |||||| |||||||||||| || |||||     |||||||||||||| |||| |||||||||||||||    
T  18929506 tattatttggaggctaagcaaccaagacccaagcccatagaaggctataaataccacctttgagaacactctca 18929433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 29603874 - 29603690
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccc 98  Q
    |||||||||||||||||||||||||||| || ||     |||||||||||||| |||||||||||||||||||||| |||||||  |||||| ||| |||    
T  29603874 tattacttggagactaagcaaccaaaacccatgcccatagaaggctataaataccacccttgagaacactctcatctatccaattatcagtcaaaaaccc 29603775  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaacta 183  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||  ||||||||||    
T  29603774 taatagacgattctgaaccctagaatccttattgtactttttctgcaagtacaattggcgccgtctgtgggaaaaggtaaaacta 29603690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 7310978 - 7310827
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  7310978 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcaggtatccaatattcagtctaaaccct 7310879  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  7310878 aatagacgtttcttaaccctagaatccttattgtactttttctgcaagtaca 7310827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 5771894 - 5772045
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||||| ||||||||   |||||||||||||||||||||||    
T  5771894 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagagcactctcaagtatccaatattcagtctaaaccct 5771993  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  5771994 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 5772045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 23692770 - 23692956
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaa-accc 98  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| |||||||||||||||||||||  |||||||| ||||||||| ||||    
T  23692770 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcatttatccaatagtcagtctaataccc 23692869  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    || || |||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  23692870 tattatacgattcttaaccctagaatccttgttgtac-ttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 23692956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 26126177 - 26126026
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||| ||||||||||     |||||||||||||| ||||||||||| ||||||||   || ||||||||||||||||||||    
T  26126177 tattacttggagactaagcaaccgaaactcaagcccatagaaggctataaataccacccttgagagcactctcaagcattcaatattcagtctaaaccct 26126078  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26126077 aatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 26126026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 45278978 - 45279129
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||    
T  45278978 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcagagatcgaatattcagtctaaaccct 45279077  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||||| || ||||||||||||| ||||||| ||||    
T  45279078 aatagacgattcttaaccctaggatccttattgtactttatctgcaagtaca 45279129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 45286277 - 45286397
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||    
T  45286277 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcagagatcgaatattcagtctaaaccct 45286376  T
Q  100 aatagacgattcttaacccta 120  Q
    |||||||||||||||||||||    
T  45286377 aatagacgattcttaacccta 45286397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 23696557 - 23696710
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaa-accc 98  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| |||||||||||||||||||||  |||||||| ||||||||| ||||    
T  23696557 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcatttatccaatagtcagtctaagaccc 23696656  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagt 153  Q
    ||||| |||||||||||||||||||| ||| |||||| |||||||||| ||||||    
T  23696657 taatatacgattcttaaccctagaatccttgttgtac-ttttctgcaagtacagt 23696710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 4876821 - 4876961
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| ||||||| ||||||    
T  4876821 tattacttggagactaagcaaccaaaacccaagctcattgaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaccc 4876920  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    || || |||||||||||||||| |||  |||||||||||||    
T  4876921 tagtatacgattcttaaccctaaaatctttattgtactttt 4876961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 8164798 - 8164879
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  8164798 acgattcttaaccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 8164879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 8998189 - 8998270
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  8998189 acgattcttaaccctagaatctttaccgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 8998270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 3071646 - 3071750
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||||||||||||||   |||||||| ||||||| ||||||    
T  3071646 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcaggtatccaataatcagtctaaaaccc 3071745  T
Q  99 taata 103  Q
    |||||    
T  3071746 taata 3071750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 41325909 - 41325812
Alignment:
Q  55 acccttgagaacactctcatcgatccaatattcagtctaaacc-ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||   ||| |||||| ||||||||   ||||||||||||||| |||||||||||  ||||| |||||||||||||| ||||    
T  41325909 acccttgagaacactctcaggtatctaatatttagtctaaaattctaatagacgattctgaaccctagaatctttattatactttttctgcaagtaca 41325812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 8168731 - 8168779
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagt 153  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||||    
T  8168731 acgattcttaaccctagaatccttaccgtactttttctgcaagtacagt 8168779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 7395078 - 7395020
Alignment:
Q  93 aaaccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||  |||||||||| ||||||||| ||||  ||||||||||||||| ||||    
T  7395078 aaaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 7395020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 15079 - 14921
Alignment:
Q  1 cccttattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    |||||||||||||| ||||||||||||||||| |||||     |||||||||||||| ||||||||||| ||||||||   |||||||||||||||||||    
T  15079 cccttattacttggtgactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagagcactctcaagtatccaatattcagtctaaa 14980  T
Q  96 ccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagtt 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  14979 ccctaatagacgattcttaaccctagaatccttattgtactttttctacaagtacagtt 14921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 19078 - 18907
Alignment:
Q  1 cccttattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    |||||||||||||||||||||||||||||||| |||||     ||||||||||||||          || ||||||||   |||||||||||||||||||    
T  19078 cccttattacttggagactaagcaaccaaaacccaagctcatagaaggctataaatac---------gagcactctcaagtatccaatattcagtctaaa 18988  T
Q  96 ccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||||||||| ||||||         ||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  18987 ccctaatagacgattcttaacc-tagaat---------actttttctgcaagtacagttggcgccgtctatgggaagaggtaaaactaacc 18907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 78715 - 78901
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| |||||  |||||||    
T  78715 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatctaataatcagtaaaaaccct 78814  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    | || |||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||| ||||||  |||||||||||||    
T  78815 agtatacgattcttaaccctagaatccttactgtactttttgtgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 78901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 26857533 - 26857381
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||| |||||||||||||| |||||     |||||||||||||| |||||||||| |||||||||   |||||||||||||||||||||||    
T  26857533 tattacttggagattaagcaaccaaaacccaagcccatagaaggctataaataccacccttgaggacactctcaagtatccaatattcagtctaaaccct 26857434  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacag 152  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| |||||    
T  26857433 aatagacgattcttaaccctagaatccttactgtactttttctgcaagtacag 26857381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 26863776 - 26863602
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||| |||||||||||||| |||||     |||||||||||||| |||||||||| |||||||||        |||||||||| |||||||    
T  26863776 tattacttggagattaagcaaccaaaacccaagcccatagaaggctataaataccacccttgaggacactctca--------atattcagtccaaaccct 26863685  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaact 182  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||| ||||||  |||||||||    
T  26863684 aatagacgattcttaaccctagaatccttactgtactttttatgcaaatacagttggcgccgtctgtgggaagaggtaaaact 26863602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 38836792 - 38836981
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    |||||||||||||||||||||  ||||| |||||     || ||||||||||||||||||||||| ||||||||  ||   |||  ||||||||||||||    
T  38836792 tattacttggagactaagcaataaaaacccaagcccatagagggctataaatatcacccttgagagcactctcagggagggaattatcagtctaaaccct 38836891  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctat-gggaaccggtaaaactaacccg 188  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| | | ||||| |||||||||| |||||    
T  38836892 aatagacgattcttaaccctagaatcattattgtactttttctgcaagtacagttggcgccgtatgtggggaaacggtaaaactgacccg 38836981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 38840708 - 38840862
Alignment:
Q  2 ccttattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaac 96  Q
    |||||||||||||||||||||||| |||||| ||||      || ||||||||||||||||||||||||||||||||  ||   |||  |||||||||||    
T  38840708 ccttattacttggagactaagcaatcaaaacccaagtccatagagggctataaatatcacccttgagaacactctcagggagggaattatcagtctaaac 38840807  T
Q  97 cctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  38840808 cctaatagacgattcttaaccctagaatcattattgtactttttctgcaagtaca 38840862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 40933242 - 40933404
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||| ||||||||||||||| |||||     |||||||||||||| |||||||||||||||||| |   |||||||| ||||||| ||||||    
T  40933242 tattacttggaggctaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactcttaagtatccaataatcagtctaaaaccc 40933341  T
Q  99 taatagacgattcttaaccctagaa-tgcttattgtactttttctgcaactacagttggcgcc 160  Q
    ||| | || ||||||||||||| || | ||||||||||||||||||||| |||||||||||||    
T  40933342 taacatactattcttaaccctataattccttattgtactttttctgcaagtacagttggcgcc 40933404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 8460203 - 8460345
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||||||||| ||||||||| |||||     |||||||||||||| ||||||||||||||||||||   |||||||| | ||||| ||||||    
T  8460203 tattacttggagactaagaaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcagatatccaataatgagtctaaaaccc 8460302  T
Q  99 taatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    ||||| ||||||||||||||||||||  |||||||||||||||    
T  8460303 taatatacgattcttaaccctagaataccttattgtacttttt 8460345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 40936637 - 40936790
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||| ||||||||| ||||| |||||     |||||||||||||| |||||||||||||| |||||   |||||||| ||||||| ||||||    
T  40936637 tattacttggaggctaagcaacaaaaacccaagcccatagaaggctataaataccacccttgagaacagtctcaagtatccaataatcagtctaaaaccc 40936736  T
Q  99 taatagacgattcttaaccctagaat-gcttattgtactttttctgcaactaca 151  Q
    ||||| || ||||||||||||| |||  ||||||||||||||||||||| ||||    
T  40936737 taatatactattcttaaccctataatcccttattgtactttttctgcaagtaca 40936790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 40572292 - 40572212
Alignment:
Q  106 cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||||||||| |||  |||  ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  40572292 cgattcttaaccctaaaatctttaccgtactttttctgcaagtacagttggcgccgtctgtgggaaacggtaaaactaacc 40572212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 20680216 - 20680114
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcg-atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaat-gcttattgtactt 137  Q
    ||||||||||||  || ||||||| || |||||  | |||||||| |||||||||| ||||| || ||||||||||||||||||||  ||||||||||||    
T  20680216 aggctataaatactactcttgagatcattctcaaggcatccaataatcagtctaaaaccctagtatacgattcttaaccctagaatcccttattgtactt 20680117  T
Q  138 ttt 140  Q
    |||    
T  20680116 ttt 20680114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 20679908 - 20679850
Alignment:
Q  126 cttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||||||||||||||  |||| ||||||||||||||||| ||||||  |||||||||||||    
T  20679908 cttattgtacttttt--gcaagtacagttggcgccgtctgtgggaagaggtaaaactaacc 20679850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 43041974 - 43042020
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  43041974 acgattcttaaccctagaatccttaccgtactttttctgcaagtaca 43042020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 20671208 - 20671143
Alignment:
Q  77 atccaatattcagtctaa-accctaatagacgattcttaaccctagaatgc-ttattgtacttttt 140  Q
    |||||||| ||||||||| |||||| || ||||||||||||| |||||| | ||||||||||||||    
T  20671208 atccaataatcagtctaagaccctagtatacgattcttaaccttagaatccattattgtacttttt 20671143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 20675744 - 20675682
Alignment:
Q  93 aaaccctaatagacgattcttaaccctagaat-gcttattgtactttttctgcaactacagttgg 156  Q
    |||||||| || ||||||||||||||||||||  ||||||||||||||  ||||| |||||||||    
T  20675744 aaaccctagtatacgattcttaaccctagaatcccttattgtactttt--tgcaagtacagttgg 20675682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 20675414 - 20675366
Alignment:
Q  93 aaaccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    |||||||| || ||||||||||||||||||||  |||||||||||||||    
T  20675414 aaaccctagtatacgattcttaaccctagaatcccttattgtacttttt 20675366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 35415788 - 35415836
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagt 153  Q
    |||||||||||||||||||| ||||  ||||||||| ||||| ||||||    
T  35415788 acgattcttaaccctagaatccttaccgtactttttttgcaagtacagt 35415836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10470 - 10315
Alignment:
Q  1 cccttattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    ||||||||||||||| |||||||||||||||| |||||     |||||||||||||| ||||||| ||| ||||||||   ||| |||||||||||||||    
T  10470 cccttattacttggatactaagcaaccaaaacccaagcccatagaaggctataaataccacccttaagagcactctcaaatatctaatattcagtctaaa 10371  T
Q  96 ccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  10370 ccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 10315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 13957 - 13806
Alignment:
Q  1 cccttattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    ||||||||||||||| |||||||||||||||| |||||     |||||||||||||| ||||||||||| ||||||||   ||| |||||||||||||||    
T  13957 cccttattacttggatactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagagcactctcaaatatctaatattcagtctaaa 13858  T
Q  96 ccctaatagacgattcttaaccctagaatgcttattgtactttttctgcaac 147  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  13857 ccctaatagacgattcttaaccctagaatccttattgtactttttttgcaac 13806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1505 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 516 - 365
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||| || | |||||     |||| ||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  516 tattacttggagactaagcaaccgaagcccaagcccatagaagactataaataccacccttgagaacactctcaagcatccaatattcagtctaaaccct 417  T
Q  100 aatagacgattcttaaccctagaatgcttattgtactttttctgcaactaca 151  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  416 aatagacgattcttaaccctataatccttattgtactttttctgcaagtaca 365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 13101 - 12914
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccc 98  Q
    ||||||||||||||||||||||| |||| |||||     | |||||||||||| |||||||||||||||||||||| |||||| | | |||||||| |||    
T  13101 tattacttggagactaagcaaccgaaacccaagcccataggaggctataaataccacccttgagaacactctcatctatccaagaattagtctaaaaccc 13002  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||  | |||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||||  |||||||||||||    
T  13001 tagcatacgattctcaaccctagaatccttattgtactttttttgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 12914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 183
Target Start/End: Original strand, 194633 - 194816
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||||||||||||||||||| |||||     ||  |||||||||| |||| ||||||||||||||||| |||||||| ||||||| ||||||    
T  194633 tattacttggagactaagcaaccaaaacccaagcccatagagagctataaataccaccattgagaacactctcatctatccaataatcagtctaaaaccc 194732  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaacta 183  Q
    || || |||||||||||||||||||| |||||||||| |||| ||| | ||||||||||||||||| ||||||  ||||||||||    
T  194733 tagtatacgattcttaaccctagaatccttattgtac-ttttatgcgagtacagttggcgccgtctgtgggaaaaggtaaaacta 194816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 7590 - 7730
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||||||||||||||||||| |||||     || ||||||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||    
T  7590 tattacttggagactaagcaaccaaaacccaagcccatagagggctataaataccacccttgagaacactctcatctatccaataatcagtctaaaaccc 7689  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    || || |||||||||||||||||||| ||||||||||||||    
T  7690 tagtatacgattcttaaccctagaatccttattgtactttt 7730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 24872 - 25057
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    ||||||||||| |||||| |||| |||| |||||     |||||||||||||| ||||||||||||||||||||   |||||||| ||||||| ||||||    
T  24872 tattacttggaaactaagtaaccgaaacccaagcccatagaaggctataaataccacccttgagaacactctcaagtatccaataatcagtctaaaaccc 24971  T
Q  99 taatagacgattcttaaccctagaatgc-ttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaac 185  Q
    ||| | ||| |||||||||||||||| | |||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||    
T  24972 taagatacgtttcttaaccctagaatcctttattgtactttt--tgcaagtacagttggcgccgtctgtgggaaccggtaaaactaac 25057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 27531 - 27673
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    ||||||||||| |||||| |||| |||| |||||     |||||||||||||| || |||||||||||||||||   |||||||| ||| ||| ||||||    
T  27531 tattacttggaaactaagtaaccgaaacccaagcccatagaaggctataaataccatccttgagaacactctcaaatatccaataatcaatctaaaaccc 27630  T
Q  99 taatagacgattcttaaccctagaatgc-ttattgtacttttt 140  Q
    ||||| ||| |||||||||||||||| | ||| ||||||||||    
T  27631 taatatacgtttcttaaccctagaatcctttactgtacttttt 27673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 4281 - 4421
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    |||||||||||||||||||||||||||| |||||     || ||||||||||| |||||||||||||||||||||| ||| |||| ||||||| ||||||    
T  4281 tattacttggagactaagcaaccaaaacccaagcccatagagggctataaataccacccttgagaacactctcatctatctaataatcagtctaaaaccc 4380  T
Q  99 taatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    || || |||||||||||||||||||| ||||||||||||||    
T  4381 tagtatacgattcttaaccctagaatccttattgtactttt 4421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 146715 - 146905
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct--aaacc 97  Q
    ||||||||| |||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| |||||||  |||||    
T  146715 tattacttgaagactaagcaaccaaaacccaagctcatagaaggctataaataccacccttgagaacactctcagatatctaataatcagtctaaaaacc 146814  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacccgg 189  Q
    ||| || |||||  ||| ||||||||| |||||||||| |||| ||||| ||||||||||||||||| |||||| |||||||||| ||||||    
T  146815 ctagtatacgatatttatccctagaatccttattgtac-ttttatgcaagtacagttggcgccgtctgtgggaatcggtaaaactgacccgg 146905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 149922 - 150063
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaa--acc 97  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||   ||| |||| |||||||||  |||    
T  149922 tattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaacactctcagatatctaataatcagtctaaatacc 150021  T
Q  98 ctaatagacgattcttaaccctagaatgcttattgtactttt 139  Q
    ||| || ||||||||||||| |||||| ||||||||||||||    
T  150022 ctagtatacgattcttaaccatagaatccttattgtactttt 150063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 186
Target Start/End: Complemental strand, 44435 - 44288
Alignment:
Q  39 gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccctaatagacgattcttaaccctagaatgcttattgtactt 137  Q
    ||||| |||||||| ||||||||||||||||||||   |||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||      
T  44435 gaaggttataaataccacccttgagaacactctcaagtatccaatagtcagtctaaaaccctaatatacgattcttaaccctagaatccttattgtac-c 44337  T
Q  138 tttctgcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    ||||||||| |||||||||||||| || |||| |  |||||||||||||    
T  44336 tttctgcaagtacagttggcgccgactgtggggaaaggtaaaactaacc 44288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 1607 - 1442
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccc 98  Q
    ||||||||||||||||||||||| ||||||||||     |||||||||||||| ||||||| ||||||||||||   ||| |||| |||||||||| |||    
T  1607 tattacttggagactaagcaaccgaaactcaagcccatagaaggctataaataccacccttaagaacactctcaagtatctaataatcagtctaaaaccc 1508  T
Q  99 taataga-cgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtct 164  Q
    || || | ||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||    
T  1507 tagtataacgattcttaaccctagaatccttattgtac-ttttgtgcaagtacagttggcgccgtct 1442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 207
Target Start/End: Original strand, 36986 - 37117
Alignment:
Q  77 atccaatattcagtctaaa-ccctaatagacgattcttaaccctagaatgc-ttattgtactttttctgcaactacagttggcgccgtctatgggaaccg 174  Q
    |||||||| |||||||||| ||| |||| |||||||||||||||||||| | ||||||||||||||  |||| ||||||||||||||| | |||||||||    
T  36986 atccaataatcagtctaaagcccgaatatacgattcttaaccctagaatcccttattgtacttttt--gcaagtacagttggcgccgtttgtgggaaccg 37083  T
Q  175 gtaaaactaac-ccggccacacctctcaatcgca 207  Q
    ||||||||||| | ||| ||||||||||||||||    
T  37084 gtaaaactaactcgggctacacctctcaatcgca 37117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 2996 - 2856
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagcg-----aaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||| |||  |||||      ||||||||||||| | |||||||||| ||||||    ||| |||| ||||||||||||||    
T  2996 tattacttggagactaagcaaccgaaatccaagcccatacaaggctataaatacctcccttgagaagactctcgggcatcgaataatcagtctaaaccct 2897  T
Q  100 aatagacgattcttaaccctagaat-gcttattgtactttt 139  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  2896 aatagacgattcttaaccctagaatcccttattgtactttt 2856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 135834 - 135693
Alignment:
Q  44 ctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccctaatagacgattcttaaccctagaat-gcttattgtactttttct 142  Q
    ||||||||| ||| || |||| || |||||   |||||||| ||| || ||||||||||| ||||||||||||||||||||  | ||||||||||||  |    
T  135834 ctataaataccactctagagatcattctcaagcatccaataatcactcaaaaccctaatatacgattcttaaccctagaatcacctattgtactttt--t 135737  T
Q  143 gcaactacagttggcgccgtctatgggaaccggtaaaactaacc 186  Q
    |||| ||||||||||||||||| ||||||  |||||||||||||    
T  135736 gcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacc 135693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 133514 - 133414
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccctaatagacgattcttaaccctagaat-gcttattgtactttt 139  Q
    |||||||||||| ||| || |||| || |||||   |||||||| ||| || ||||||||||| ||||||||||||||||||||  | ||||||||||||    
T  133514 aggctataaataccactctagagatcattctcaagcatccaataatcattcaaaaccctaatatacgattcttaaccctagaatcacctattgtactttt 133415  T
Q  140 t 140  Q
    |    
T  133414 t 133414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 138043 - 137943
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccctaatagacgattcttaaccctagaat-gcttattgtactttt 139  Q
    |||||||||||| ||| || |||| || |||||   |||||||| ||| || ||||||||||| ||||||||||||||||||||  | ||||||||||||    
T  138043 aggctataaataccactctagagatcattctcaagcatccaataatcattcaaaaccctaatatacgattcttaaccctagaatcacctattgtactttt 137944  T
Q  140 t 140  Q
    |    
T  137943 t 137943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 2259 - 2366
Alignment:
Q  93 aaaccctaatagacgattcttaaccctagaat-gcttattgtactttttctgcaactacagttggcgccgtctatgggaac--cggtaaaactaacc-cg 188  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||  ||||| ||||||||||||||||| |||||||  ||||||||||||||  |    
T  2259 aaaccctaatatacgattcttaaccctagaatcccttattgtactttt--tgcaagtacagttggcgccgtctttgggaacctcggtaaaactaacctag 2356  T
Q  189 gccacacctc 198  Q
    ||||||||||    
T  2357 gccacacctc 2366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 12061 - 12203
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtct-aaaccc 98  Q
    ||||||||||||||||||||||| |||  |||||     |||||||||||||| || ||||||  |||||||||   |||||||| ||||||| ||||||    
T  12061 tattacttggagactaagcaaccgaaatccaagcccatagaaggctataaataccatccttgaacacactctcagatatccaataatcagtctaaaaccc 12160  T
Q  99 taatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    ||||| | ||||||||||||||||||  |||||||||||||||    
T  12161 taatatatgattcttaaccctagaatcccttattgtacttttt 12203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 245305 - 245387
Alignment:
Q  105 acgattcttaaccctagaatgcttattgtactttttctgcaactacagttggcgccgtctatgggaac-cggtaaaactaacc 186  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||| |||| || ||||||||||||||    
T  245305 acgattcttaaccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtggggactcggtaaaactaacc 245387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 10549 - 10407
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaaccct 99  Q
    ||||||||||||||||||||||| |||  ||| |     |||||| ||||||| || ||||||  |||||||||   |||||||| |||||||||| |||    
T  10549 tattacttggagactaagcaaccgaaatccaatcccatagaaggccataaataccatccttgaacacactctcagatatccaataatcagtctaaaacct 10450  T
Q  100 -aatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
     |||| ||||||||||||||||||||  |||||||||||||||    
T  10449 taatatacgattcttaaccctagaatcccttattgtacttttt 10407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 56527 - 56600
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctca 73  Q
    |||||||||||||||||||||||||||  |||||     |||||||||||||| ||||||||||||||||||||    
T  56527 tattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccacccttgagaacactctca 56600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 20634 - 20539
Alignment:
Q  5 tattacttggagactaagcaaccaaaactcaagc-----gaaggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa 95  Q
    ||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||||||||| ||||   ||| |||| ||||||||||    
T  20634 tattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaacaccctcaggtatctaataatcagtctaaa 20539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 4146 - 4289
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcgatcc-aatattcagtctaaaccctaatagacgattcttaaccctagaatg-cttattgtacttt 138  Q
    |||||||||||| ||| || |||| || |||||  ||||| |||| | |||| ||||||||| | | ||||||||||||||||||  | |||||||||||    
T  4146 aggctataaataccactctagagatcattctcaaagatccgaatagttagtcaaaaccctaaaataagattcttaaccctagaatcacctattgtacttt 4245  T
Q  139 ttctgcaactacagttggcgccgtctatgggaaccggtaaaactaa 184  Q
    ||  |||| ||||||||||||||||| |||| |  |||||||||||    
T  4246 tt--gcaagtacagttggcgccgtctgtggggaaaggtaaaactaa 4289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 96310 - 96209
Alignment:
Q  41 aggctataaatatcacccttgagaacactctcatcgatccaatattcagtctaaa-ccctaatagacgattcttaaccctagaa-tgcttattgtacttt 138  Q
    |||||||||||| ||| || |||| || |||||   |||| ||| |||| ||||| |||||||| ||||||||||||||||||| | |||||||||||||    
T  96310 aggctataaataccactctagagatcattctcaagcatccgatagtcagcctaaaaccctaatatacgattcttaaccctagaatttcttattgtacttt 96211  T
Q  139 tt 140  Q
    ||    
T  96210 tt 96209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 25775 - 25713
Alignment:
Q  80 caatattcagtctaaa-ccctaatagacgattcttaaccctagaat-gcttattgtacttttt 140  Q
    ||||| |||||||||| ||||| || ||||||||||||||||||||  |||||||||||||||    
T  25775 caataatcagtctaaaaccctagtatacgattcttaaccctagaatcacttattgtacttttt 25713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University