View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11708_low_3 (Length: 749)
Name: NF11708_low_3
Description: NF11708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11708_low_3 |
 | |
|
| [»] scaffold0006 (1 HSPs) |
| | |
|
| [»] scaffold0842 (1 HSPs) |
| | |
|
| [»] scaffold0197 (1 HSPs) |
| | |
|
| [»] scaffold0028 (1 HSPs) |
| | |
|
| [»] scaffold0188 (1 HSPs) |
| | |
|
| [»] scaffold0078 (1 HSPs) |
| | |
|
| [»] scaffold0355 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 318; Significance: 1e-179; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 5 - 423
Target Start/End: Original strand, 10446411 - 10446831
Alignment:
| Q |
5 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10446411 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttcaagaaggattgcctggataaagg |
10446510 |
T |
|
| Q |
105 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
204 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10446511 |
gggcaatggtagtcattccgttcaagttgcggaggcaaccaatgacgatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaag |
10446610 |
T |
|
| Q |
205 |
agttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaa |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
10446611 |
agttgggttttggactcgggatgctcttatcacatgtgtcccaggaaggaatattttgatactttggctctaaaagaaagaggagttgttcgactcggaa |
10446710 |
T |
|
| Q |
305 |
ataaccggttctttatgaagacaccaggattctagcaaaatccagtcttgaagcca--acaatgtctttatcaaaatcctgaaagtccccatatttggaa |
402 |
Q |
| |
|
|||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10446711 |
ataacccattcttgatgaagacactaggattctagcaaaatccagtcttgaagccaacacagtgtcttcatcaaaatcctgaaagtccccatatttggaa |
10446810 |
T |
|
| Q |
403 |
cccaaaagtttgaaaaaagat |
423 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10446811 |
cccaaaagtttgaaaaaagat |
10446831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 19348370 - 19348075
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
19348370 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataa-gggggcgatg |
19348272 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||| ||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
19348271 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcaggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
19348172 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
19348171 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcagaaataac |
19348075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 25402743 - 25402481
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||| ||||||| |||||| || |
|
|
| T |
25402743 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaggattgtccggataaggggggcgatg |
25402644 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| || |||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||| |
|
|
| T |
25402643 |
gtagtccttcggtccaagttgcggaggcatcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccagagaagagttgggt |
25402544 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctct |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||| |
|
|
| T |
25402543 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgactct |
25402481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 2737384 - 2737474
Alignment:
| Q |
154 |
ggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||||| || |||||| || | |||||||||||| || || || ||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
2737384 |
ggttatgagagtgctggagcactaactgtgacaagttgggaacctgaaaagagctgggtcttggactctgggtgctcttatcacatttgtc |
2737474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 39681225 - 39681315
Alignment:
| Q |
154 |
ggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||||| || |||||| || | |||||||||||| || || || ||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
39681225 |
ggttatgagagtgctggagcactaactgtgacaagttgggaacctgaaaagagctgggtcttggactctgggtgctcttatcacatttgtc |
39681315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 5 - 309
Target Start/End: Original strand, 16624979 - 16625283
Alignment:
| Q |
5 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
16624979 |
gcaaggggaagtcgaggtccaagggctttgaaaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaagaaggattgcccggataaagg |
16625078 |
T |
|
| Q |
105 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
204 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
16625079 |
gggcaatcgtagtccttccgttcaagttgcggaggcgtccaatgaagatggttctgagagtgcgggtgcactagtggttacaagttgggaaccggagaag |
16625178 |
T |
|
| Q |
205 |
agttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaa |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
16625179 |
agttgggttttggactcgggatgctcttatcacatgtgtcctaggaaggaatattttgagactttggctctaaaagaaggaggagttgttcgaatcggaa |
16625278 |
T |
|
| Q |
305 |
ataac |
309 |
Q |
| |
|
||||| |
|
|
| T |
16625279 |
ataac |
16625283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 9225398 - 9225694
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
9225398 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
9225497 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| || ||||||||| ||||| | || ||||||| ||||||||||||| ||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
9225498 |
gtagtccctcggttcaagttacggagacttcaaatgaagaaggttatgagagtgagggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
9225597 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9225598 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgtttgactcggaaataac |
9225694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 19 - 309
Target Start/End: Complemental strand, 5146988 - 5146701
Alignment:
| Q |
19 |
aggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtc |
118 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
5146988 |
aggtccaaaggctttgacaaataaaagtataagtgttttctttgtcataagcaaggtcacttcaagaaggattgtccggataaagggggtgatggtagtc |
5146889 |
T |
|
| Q |
119 |
attccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttgga |
218 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| || ||||||| |
|
|
| T |
5146888 |
cgtccgttcaagttgcggaggcatcaaatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaactggagaagagtcggtttttgga |
5146789 |
T |
|
| Q |
219 |
ctcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
||| ||||||||||||| |||||||| |||||| ||||||||||| |||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
5146788 |
ctcaggatgctcttatcgcatgtgtcctaggaaggaatattttga---tttggctctaaattaaggaggagttgttcgactcggaaataac |
5146701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 18241734 - 18241801
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcactt |
80 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |
|
|
| T |
18241734 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaatgtcactt |
18241801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 228; Significance: 1e-125; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 5 - 308
Target Start/End: Original strand, 3324522 - 3324825
Alignment:
| Q |
5 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| || ||||||| |
|
|
| T |
3324522 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttcaagaaggattgcccgaataaagg |
3324621 |
T |
|
| Q |
105 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
204 |
Q |
| |
|
||||||| ||| || |||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3324622 |
gggcaatggtaatccttccgtgcaagttgcgaaggcgtccaatgaagatggttatgagagggcgggtgcactagtggtcacaagttgggaaccggagaag |
3324721 |
T |
|
| Q |
205 |
agttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaa |
304 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3324722 |
agttgggtgttggactcgggatgctcttattacatgtgtcctaggaaggaatattttgatactttggctctaaaagaaggaggagttgtttgactcggaa |
3324821 |
T |
|
| Q |
305 |
ataa |
308 |
Q |
| |
|
|||| |
|
|
| T |
3324822 |
ataa |
3324825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 309
Target Start/End: Original strand, 9602842 - 9603137
Alignment:
| Q |
14 |
agtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatag |
113 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| || ||||||| | |
|
|
| T |
9602842 |
agtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttcaagaaggattttccggatagagagggcaatgg |
9602941 |
T |
|
| Q |
114 |
tagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggtt |
213 |
Q |
| |
|
| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
9602942 |
ttgtccttccgttcaagttgcggaggcgtcaaatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaagagttgggtt |
9603041 |
T |
|
| Q |
214 |
ttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||| |
|
|
| T |
9603042 |
ttggactcgggatgctcttatcatatgtgtcctagaaaggaatattttgagactttggctctaagagaaggagaagttgttcgactcagaaataac |
9603137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 16263456 - 16263159
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcactt-caagaaggattgctcggataaagggggcaat |
111 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||| |
|
|
| T |
16263456 |
aagtctaggtcccagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcattttcaagaaggattgccaggataaagggggcaat |
16263357 |
T |
|
| Q |
112 |
agtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttggg |
211 |
Q |
| |
|
|||||| ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||| ||||||| |
|
|
| T |
16263356 |
ggtagtccttccgttcaagttgcggaggcttcaaatgaagatggttttgagagtgcgggtgcactagtggttacaagttgggaatcggagaagagttggg |
16263257 |
T |
|
| Q |
212 |
ttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |
|
|
| T |
16263256 |
ttttggactcgggatgctcttatcacatgtgtcctaggaagaaatattttgagactttggctctaaaataaggaggagttgttcgactcagaaataac |
16263159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 8516187 - 8515891
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
8516187 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
8516088 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||| |
|
|
| T |
8516087 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagttaggt |
8515988 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||| | | ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8515987 |
tttggactcgggatgctcttatcacatgagccctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
8515891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 32479433 - 32479137
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
32479433 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
32479334 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
32479333 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
32479234 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||| | | ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
32479233 |
tttggactcgggatgctcttatcacatgagccctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
32479137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 28490168 - 28490463
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| |||| ||||||| |||||| || |
|
|
| T |
28490168 |
aagtctagatccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattttccggataa-gggggcgatg |
28490266 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||| ||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || || || |
|
|
| T |
28490267 |
gtagtccttcggttcaagttacggaggcttcaaatgaagagggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgagt |
28490366 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||||||| |
|
|
| T |
28490367 |
tttggactcgggatgctcttatcacatgtgtcctagaaatgaatattttgagactttgattcttaaagaaggaggagttgttcgacttggaaataac |
28490463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 124 - 309
Target Start/End: Original strand, 2673325 - 2673510
Alignment:
| Q |
124 |
gttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgg |
223 |
Q |
| |
|
||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
2673325 |
gttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttaggttttggactcgg |
2673424 |
T |
|
| Q |
224 |
gatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
||||||||||||||||| | | ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2673425 |
gatgctcttatcacatgagccctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
2673510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 10898184 - 10898274
Alignment:
| Q |
154 |
ggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||||| || |||||| || | |||||||||||| || || | ||||| |||||||| ||||||||||||||||| |||| |
|
|
| T |
10898184 |
ggttatgagagtgctggagcactaactgtgacaagttgggaacctgaaaagggctgggtcttggactctggatgctcttatcacatttgtc |
10898274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 5 - 308
Target Start/End: Complemental strand, 49090790 - 49090487
Alignment:
| Q |
5 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
104 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| ||||||| | |||| ||||| |
|
|
| T |
49090790 |
gcaatgggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaataaggatttcccggacaaagg |
49090691 |
T |
|
| Q |
105 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
204 |
Q |
| |
|
||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
49090690 |
gggaaatggtagtccttccgttcaagttgcggaggcgtccaatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaag |
49090591 |
T |
|
| Q |
205 |
agttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaa |
304 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
49090590 |
agttgagttttggactcgggatgctctgatcacatgtgtcttaggaaggaatattttgagactttggctctaaaagaaggaggagttgctcgactcggaa |
49090491 |
T |
|
| Q |
305 |
ataa |
308 |
Q |
| |
|
|||| |
|
|
| T |
49090490 |
ataa |
49090487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 21988013 - 21987717
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || |
|
|
| T |
21988013 |
aagtctaggtccaagggctttgacaaatcaaagtataagtattttctttgtcataagcaaggtcatttcaagaaggattgctcggataaagggggcgatg |
21987914 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||| ||| |
|
|
| T |
21987913 |
gtagtccgtccgttcaagttgcggaggcgtcaaatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccagagaagagttaggt |
21987814 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
21987813 |
tttggactcaggatgctcttatcacatgtgtcctaggaaggaatattttgagactttggctctaaaagaaggaggagttgttcgactcggaaataac |
21987717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 5 - 309
Target Start/End: Original strand, 9186131 - 9186435
Alignment:
| Q |
5 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
104 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||| ||||| |
|
|
| T |
9186131 |
gcaaggggcagtcgagatccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaagaaggattgcccggacaaagg |
9186230 |
T |
|
| Q |
105 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
204 |
Q |
| |
|
||||||| |||||| |||||||||||||| |||||| || ||||||| |||||||||||| |||||||||||||||| | |||||||||||||||||| |
|
|
| T |
9186231 |
gggcaatggtagtccttccgttcaagttgtggaggcttcaaatgaagaaggttatgagagtacgggtgcactagtggttacaagttgggaaccggagaag |
9186330 |
T |
|
| Q |
205 |
agttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaa |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9186331 |
agttgggttttggactcgggatgctcttatcacatgtgtcctagaaagaaatattttgagactttggctctaaaagaaggaggagttgtttgactcggaa |
9186430 |
T |
|
| Q |
305 |
ataac |
309 |
Q |
| |
|
||||| |
|
|
| T |
9186431 |
ataac |
9186435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 5 - 309
Target Start/End: Complemental strand, 21645138 - 21644834
Alignment:
| Q |
5 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||| ||||||| || |
|
|
| T |
21645138 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaggattgtccggataaggg |
21645039 |
T |
|
| Q |
105 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
204 |
Q |
| |
|
||| || |||||| ||| || |||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||| |
|
|
| T |
21645038 |
cggcgatggtagtccttcggtccaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaactggagaag |
21644939 |
T |
|
| Q |
205 |
agttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaa |
304 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
21644938 |
agttgggttttggactcgggatgctcttaccacatgtgtcctagaaaggaatattttgagactttgactctaaaagaaggaggagttgttcgactcggaa |
21644839 |
T |
|
| Q |
305 |
ataac |
309 |
Q |
| |
|
||||| |
|
|
| T |
21644838 |
ataac |
21644834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 18412751 - 18412455
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||||||||| || |
|
|
| T |
18412751 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaggattgtccggataaagggggcgatg |
18412652 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| || |||||||||||||| || ||||||| |||||||||||| |||||||||||||||| | ||||||| || ||||||| |||||||| |
|
|
| T |
18412651 |
gtagtccttcggtccaagttgcggaggcttcaaatgaagaaggttatgagagtacgggtgcactagtggttacaagttggaaatcggagaagagttgggt |
18412552 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18412551 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgactctaaaagaaggaggagttgttcgactcggaaataac |
18412455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 16884020 - 16883724
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
16884020 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
16883921 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
16883920 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
16883821 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||| | | ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16883820 |
tttggactcgggatgctcttatcacatgagccctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
16883724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 24262317 - 24262613
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
24262317 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
24262416 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
24262417 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
24262516 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||| | | ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
24262517 |
tttggactcgggatgctcttatcacatgagccctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
24262613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 13 - 292
Target Start/End: Complemental strand, 12405430 - 12405151
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
12405430 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
12405331 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||| || |
|
|
| T |
12405330 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgtgggtgcactagtggtaacaagttgggaaccggagaagagttgagt |
12405231 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttg |
292 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12405230 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttg |
12405151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 21 - 309
Target Start/End: Original strand, 5818188 - 5818475
Alignment:
| Q |
21 |
gtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtcat |
120 |
Q |
| |
|
||||||||| ||||||||||| || |||| ||||||||||||| || ||| ||||||| |||||||| ||| |||||||||| | || || | |
|
|
| T |
5818188 |
gtccaaggggcttgacaaatcattgttacaatgctttctttgtcataagcccggtgacttcaacaaggattgtctggacaaagggggcagtggtggttct |
5818287 |
T |
|
| Q |
121 |
tccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggact |
220 |
Q |
| |
|
||||||||| || || | |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||| |
|
|
| T |
5818288 |
tccgttcaaactgtggtgacgtctaatgaagatggttatgagagtgcgggtgcattagtggtcacaagttgggaaccggagaagaggtgggttttggact |
5818387 |
T |
|
| Q |
221 |
cgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||| || | || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5818388 |
cggggtg-ttttttcacatgtgtcctaggaagaaatattttgagactttggctctaaaagaaggaggagttgttcgactcggaaataac |
5818475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 25352531 - 25352621
Alignment:
| Q |
154 |
ggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||||| || |||||| || | |||||||||||| || || || ||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
25352531 |
ggttatgagagtgctggagcactaactgtgacaagttgggaacctgaaaagagctgggtcttggactctgggtgctcttatcacatttgtc |
25352621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 25406593 - 25406683
Alignment:
| Q |
154 |
ggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||||| || |||||| || | |||||||||||| || || || ||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
25406593 |
ggttatgagagtgctggagcactaactgtgacaagttgggaacctgaaaagagctgggtcttggactctgggtgctcttatcacatttgtc |
25406683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 213; Significance: 1e-116; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 1600 - 1304
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| | || |||||||||||||| |
|
|
| T |
1600 |
aagtctaggtcccagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttaaagaaggatttcccgaataaagggggcaatg |
1501 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
1500 |
gtagtccttccgttcaagttgttgtggcgtccgatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaagagttgggt |
1401 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||| |
|
|
| T |
1400 |
tttggactcgggatgctcttatcacatgtgtcttagaaatgaatattttgagactttggctctaaaagaaggaggagtagctcgactcggaaataac |
1304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 213; Significance: 1e-116; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 5 - 309
Target Start/End: Complemental strand, 26300451 - 26300147
Alignment:
| Q |
5 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
26300451 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaggattgttcggataaagg |
26300352 |
T |
|
| Q |
105 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
204 |
Q |
| |
|
|||| || |||||| ||| || |||||||||||||| || |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
26300351 |
gggcgatggtagtccttcggtccaagttgcggaggcttcaagtgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaag |
26300252 |
T |
|
| Q |
205 |
agttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaa |
304 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
26300251 |
agttgggttttggacttgggatgctcttatcacatgtgtcatagaaaggaatattttgagactttgactctaaaagaaggaggagttgttcgactcggaa |
26300152 |
T |
|
| Q |
305 |
ataac |
309 |
Q |
| |
|
||||| |
|
|
| T |
26300151 |
ataac |
26300147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 23800511 - 23800808
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg-gggcaat |
111 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
23800511 |
aagtctaggtccaagggcttttacaaatcaaagtataaatgctttctttgtcataagcaaggccacttcaagaaggattgcctggataaaggagggcaat |
23800610 |
T |
|
| Q |
112 |
agtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttggg |
211 |
Q |
| |
|
|||||| ||||||||||||||| | || |||| || || ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
23800611 |
ggtagtccttccgttcaagttgcagtggtgtccgattaacatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaagagttggg |
23800710 |
T |
|
| Q |
212 |
ttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
23800711 |
ttttgaactcgggatgctcttatcacatgtgtcttaggaaggaatattttgagactttggttctaaaagaaggaagagttgttcgactcggaaataac |
23800808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 5 - 309
Target Start/End: Original strand, 18856261 - 18856565
Alignment:
| Q |
5 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| || |
|
|
| T |
18856261 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggg |
18856360 |
T |
|
| Q |
105 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
204 |
Q |
| |
|
|||| || |||||| ||| || |||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
18856361 |
gggcgatggtagtccttcggtccaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaag |
18856460 |
T |
|
| Q |
205 |
agttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaa |
304 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
18856461 |
agctgggttttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaa |
18856560 |
T |
|
| Q |
305 |
ataac |
309 |
Q |
| |
|
||||| |
|
|
| T |
18856561 |
ataac |
18856565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 5 - 309
Target Start/End: Original strand, 18866656 - 18866960
Alignment:
| Q |
5 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| | ||||| || |
|
|
| T |
18866656 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccagataaggg |
18866755 |
T |
|
| Q |
105 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
204 |
Q |
| |
|
|||| || |||||| ||| || |||||||||||||| || ||||||| |||||||||||||| |||||||||||||| | |||||||||||||||||| |
|
|
| T |
18866756 |
gggcgatggtagtccttcggtccaagttgcggaggcttcaaatgaagaaggttatgagagtgcaggtgcactagtggttacaagttgggaaccggagaag |
18866855 |
T |
|
| Q |
205 |
agttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaa |
304 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
18866856 |
agctgggttttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaa |
18866955 |
T |
|
| Q |
305 |
ataac |
309 |
Q |
| |
|
||||| |
|
|
| T |
18866956 |
ataac |
18866960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 10685258 - 10685554
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
10685258 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
10685357 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
10685358 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
10685457 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||| | | ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10685458 |
tttggactcgggatgctcttatcacatgagccctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
10685554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 35744483 - 35744186
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
35744483 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
35744384 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
35744383 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
35744284 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaagg-aggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||| || |||||||||||||||||| |||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
35744283 |
tttggactcgggatgctcatatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaaggagttgttcgactcggaaataac |
35744186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 16756262 - 16756172
Alignment:
| Q |
154 |
ggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||||| || |||||| || | |||||||||||| || || || ||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
16756262 |
ggttatgagagtgctggagcactaactgtgacaagttgggaacctgaaaagagctgggtcttggactctgggtgctcttatcacatttgtc |
16756172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 21038609 - 21038699
Alignment:
| Q |
154 |
ggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||||| || |||||| || | |||||||||||| || || ||||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
21038609 |
ggttatgagagtgctggagcactaactgtgacaagttgggaacctgaaaagggttgggtcttggactctgggtgctcttatcacatctgtc |
21038699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 28329087 - 28329177
Alignment:
| Q |
154 |
ggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||||| || |||||| || | |||||||||||| || || || ||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
28329087 |
ggttatgagagtgctggagcactaactgtgacaagttgggaacctgaaaagagctgggtcttggactctgggtgctcttatcacatttgtc |
28329177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0842 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0842
Description:
Target: scaffold0842; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 4188 - 4484
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
4188 |
aagtctaggtccaagagctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaagaaggattgcccggataaagggggcaatg |
4287 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| |||||||| |
|
|
| T |
4288 |
gtagtccttccgttcaatttgcagaggcgtcaaatgaagatggttatgagagtgcgggtgcactagtggttacaagttggaaatcggagaagagttgggt |
4387 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
4388 |
tttggactcgggatgctcttatcacatgtgtcctaggaagaaatattttgagactttggctttaaaagaaggaggagttgttcgactcggaaataac |
4484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 47099812 - 47100108
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
47099812 |
aagtctaggtccaaggggtttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttcaagaaggattacccggataaagggggcaatg |
47099911 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| || |
|
|
| T |
47099912 |
gtagtccttccgttcaagttgtggaggcttccaatgaagatggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaagagttgagt |
47100011 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
47100012 |
tttggaccttggatgctcttatcacatgtgtcataggaagaaatattttgagactttggctctaaaagaaggaggagttgtttgactcgaaaataac |
47100108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 19359832 - 19360128
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| | |||||||||||||| || |
|
|
| T |
19359832 |
aagtcaaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcattagcaaggtcatttcaagaaggatttcccggataaagggggcgatg |
19359931 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| |||||| |||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
19359932 |
gtagtccttccgtccaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaagagttgggt |
19360031 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
19360032 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgaggctttgactctaaaagaaggaggagttgttcgactcggaaataac |
19360128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 41397332 - 41397036
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| | |
|
|
| T |
41397332 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgacg |
41397233 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || || |||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
41397232 |
gtagtccttcggttcaagttgcggaggcttcaaataaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagttgggt |
41397133 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
41397132 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
41397036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 304
Target Start/End: Original strand, 9024878 - 9025084
Alignment:
| Q |
97 |
gataaagggggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaac |
196 |
Q |
| |
|
||||||||||||||| || || ||||||||||||||||| || |||| |||||||||| |||| |||||||||||||||||||| ||||| | | |
|
|
| T |
9024878 |
gataaagggggcaatggtggttcttccgttcaagttgcggtggagtccgatgaagatggatatgtc--tgcgggtgcactagtggtcacaagttcgaagt |
9024975 |
T |
|
| Q |
197 |
cggagaaaagttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagac-tttggctctaaaagaaggaggagttgtta |
295 |
Q |
| |
|
||||||| ||||||||||||||| ||| | |||||||||||||||| ||| || ||||||||| |||| ||||||||||||||||| |||||||||| |
|
|
| T |
9024976 |
cggagaagagttgggttttggacctggggttttcttatcacatgtgtcctagaaaggaatattttaagacttttggctctaaaagaagaaggagttgttc |
9025075 |
T |
|
| Q |
296 |
gactcggaa |
304 |
Q |
| |
|
||||||||| |
|
|
| T |
9025076 |
gactcggaa |
9025084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 55 - 259
Target Start/End: Original strand, 17346550 - 17346753
Alignment:
| Q |
55 |
tttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatg |
154 |
Q |
| |
|
||||||||||| | || | |||||||||||||||||| || | ||||||||||| || || |||| ||||||||| || ||||| ||||||||| |
|
|
| T |
17346550 |
tttctttgtcaaaagcccgatcacttcaagaaggattgttc-aaacaagggggcaatggtggttcttccattcaagttgtggtggcgtttgatgaagatg |
17346648 |
T |
|
| Q |
155 |
gttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtcataggaatga |
254 |
Q |
| |
|
||||| |||||| ||||||| ||||||||| |||||||||||| ||||| |||| ||||||||| ||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
17346649 |
gttattagagtgtgggtgcattagtggtcacaagttgggaaccagagaagagttaggttttggagtcggggtgctcttatcacatgtgtcctaggaatga |
17346748 |
T |
|
| Q |
255 |
atatt |
259 |
Q |
| |
|
||||| |
|
|
| T |
17346749 |
atatt |
17346753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 287
Target Start/End: Complemental strand, 29485667 - 29485393
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||| |
|
|
| T |
29485667 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaagaaggattgcccggctaaagggggcaatg |
29485568 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
29485567 |
gtagtccatccgttcaagttgcggaggtgtccaatgaagattgttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaagagttgggt |
29485468 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggagg |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||||| |
|
|
| T |
29485467 |
tttggactcgggatgctcttatcacatgtgtcctaggaaggaatattttgggactttggttctaaaagaaggagg |
29485393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 14738566 - 14738862
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
14738566 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
14738665 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
14738666 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
14738765 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14738766 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
14738862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 24432315 - 24432611
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||||| | |||||| |||||||||| |
|
|
| T |
24432315 |
aagtctaggtccaagggttttgacaaatcaaagtataaatgctttctttgtcacaaacaatgtcacttcaagaaggattacccggatagagggggcaatg |
24432414 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
||||| ||||||||||||||||| ||| || ||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||| |
|
|
| T |
24432415 |
ctagtccttccgttcaagttgcggtggcatctgatgaagatgtttatgagagtgtgggtgcactagcggtcataagttgggaaccagagaagagttgggt |
24432514 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||| || |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
24432515 |
tttggactcgggatgctcttatcacgtatgtcatagaaaggaatattttgagactttggctctaaaagaatgaggagttgttcgactcggaaataac |
24432611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 69 - 309
Target Start/End: Original strand, 33332126 - 33332366
Alignment:
| Q |
69 |
gcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcg |
168 |
Q |
| |
|
||||||||| |||||||| ||||| ||||||| |||||| | ||| ||| || ||||||||||||||||| || ||||||| ||||||||||||||| |
|
|
| T |
33332126 |
gcaaggtcatttcaagaaagattgtccggataaggggggcgaaagtggtccctcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcg |
33332225 |
T |
|
| Q |
169 |
ggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactt |
268 |
Q |
| |
|
||||| |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| |
|
|
| T |
33332226 |
ggtgcgctagtggtaacaagttgggaaccggagaagagttgggttttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactt |
33332325 |
T |
|
| Q |
269 |
tggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|| |||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
33332326 |
tgattctaaaagaaggaggagttgttcgactcagaaataac |
33332366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 24 - 309
Target Start/End: Complemental strand, 24078012 - 24077727
Alignment:
| Q |
24 |
caagggctttgacaaatcaaagtataaatgatttc-tttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtcattc |
122 |
Q |
| |
|
|||||| ||||| |||||||||||| || ||||| ||||||||| || |||||||||||||||||||| | || || || || ||| ||||| ||| |
|
|
| T |
24078012 |
caaggggtttgataaatcaaagtatcgat-atttcatttgtcataaacatggtcacttcaagaaggattgtcctgacaagggaggaaatggtagttcttc |
24077914 |
T |
|
| Q |
123 |
cgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcg |
222 |
Q |
| |
|
||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||| | ||| |||||||||| | ||||| |||||||| |||||||| |
|
|
| T |
24077913 |
tgtttaagttgcaatggcgtccgatgaagatggttatgagagtgcgggtgcattagcgatcacaagttgggaatcagagaagagttgggtcttggactca |
24077814 |
T |
|
| Q |
223 |
ggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|| |||||||||||||||| | | || ||||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| |
|
|
| T |
24077813 |
gggtgctcttatcacatgtttttgggaaaggaatattttgagactttggatctaaaagaaggtggagttgttcgactcaaaaataac |
24077727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 33331440 - 33331492
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtca |
65 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33331440 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtca |
33331492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 13879918 - 13880008
Alignment:
| Q |
154 |
ggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||||| || |||||| || | |||||||||||| || || || ||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
13879918 |
ggttatgagagtgctggagcactaactgtgacaagttgggaacctgaaaagagctgggtcttggactctgggtgctcttatcacatttgtc |
13880008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0197 (Bit Score: 193; Significance: 1e-104; HSPs: 1)
Name: scaffold0197
Description:
Target: scaffold0197; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 15303 - 15599
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
15303 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
15402 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
15403 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagttgggt |
15502 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
15503 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
15599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 27448915 - 27448619
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
27448915 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
27448816 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| |||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
27448815 |
gtagtccttcggttcaagttgtggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
27448716 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
27448715 |
tttggactcgggatgctcttatcacatgtgtcctagaaatgaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
27448619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 33790408 - 33790112
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
33790408 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
33790309 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
33790308 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
33790209 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
33790208 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
33790112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 24556579 - 24556874
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
24556579 |
aagtctaggtccaagagttttgacaaatcaaagtataaatgctttctttgtctcaaacaaggtcacttcaagaaggattgcctggataaatggggcaatg |
24556678 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||| |||||||| |
|
|
| T |
24556679 |
gtagtccttccgttcaagttgcggtggcgtccgatgaagatggttatgaga-tgtgggtgcactagtggtcacaagttgggaaccagagaagagttgggt |
24556777 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||| |||||| ||||||||||||| || || || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
24556778 |
tttggacttgggatgatcttatcacatgtatcctacaaaggaatattttgagactttggctctaaaagaaggaggagttgttcgactcggaaataac |
24556874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 24597611 - 24597906
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
24597611 |
aagtctaggtccaagagttttgacaaatcaaagtataaatgctttctttgtctcaaacaaggtcacttcaagaaggattgcctggataaatggggcaatg |
24597710 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||| |||||||| |
|
|
| T |
24597711 |
gtagtccttccgttcaagttgcggtggcgtccgatgaagatggttatgaga-tgtgggtgcactagtggtcacaagttgggaaccagagaagagttgggt |
24597809 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||| |||||| ||||||||||||| || || || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
24597810 |
tttggacttgggatgatcttatcacatgtatcctacaaaggaatattttgagactttggctctaaaagaaggaggagttgttcgactcggaaataac |
24597906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 43596214 - 43595918
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| ||||| || |
|
|
| T |
43596214 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataagaggggcgatg |
43596115 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| |||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
43596114 |
gtagtccttcggttcaagttgtggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
43596015 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
43596014 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
43595918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 43629008 - 43628712
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| ||||| || |
|
|
| T |
43629008 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataagaggggcgatg |
43628909 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| |||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
43628908 |
gtagtccttcggttcaagttgtggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
43628809 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
43628808 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
43628712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 31397986 - 31398282
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
31397986 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
31398085 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
31398086 |
gtagtccttcagttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
31398185 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||| | | ||| || ||| |||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31398186 |
tttggactcgggatgctcttatcacatgagccctagaaaggaacattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
31398282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 37557618 - 37557914
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| | |
|
|
| T |
37557618 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgaag |
37557717 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|| ||| || ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||| |
|
|
| T |
37557718 |
gtggtccctcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccagagaagagttgggt |
37557817 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||| | |||||||||||||||||| |||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
37557818 |
tttggactcgggatgctcttatcacatgattcctagaatggaatattttgagactttgattctaaaagaaggaggaattgttcgactcggaaataac |
37557914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 103 - 301
Target Start/End: Complemental strand, 34841619 - 34841421
Alignment:
| Q |
103 |
gggggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggaga |
202 |
Q |
| |
|
||||||||| ||||| ||| ||||||||||| | | | ||| ||||||||||||| |||||||| |||||||||| ||||| || |||| |||| | | |
|
|
| T |
34841619 |
gggggcaatggtagttcttcggttcaagttgcagtgacttccgatgaagatggttaggagagtgcaggtgcactagcggtcacaaattggaaaccaaaaa |
34841520 |
T |
|
| Q |
203 |
aaagttgggttttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcg |
301 |
Q |
| |
|
| |||| ||| ||||||| ||| |||||| ||||||||||| ||| || | |||||||||||||||| ||||||||| ||||||||| |||||| |
|
|
| T |
34841519 |
atagttaggtcttggacttgggttgctctgatcacatgtgttctagaaagaagtattttgagactttggagttaaaagaagacggagttgttcgactcg |
34841421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 28837147 - 28837089
Alignment:
| Q |
251 |
atgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| |
|
|
| T |
28837147 |
atgaatattttgagactttggctttaaaagaaggaggagttgttcgacttggaaataac |
28837089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 31781429 - 31781371
Alignment:
| Q |
186 |
aagttgggaaccggagaaaagttgggttttggactcgggatgctcttatcacatgtgtc |
244 |
Q |
| |
|
|||||||||||| || || ||||||| |||||||| ||||||||||||||||| |||| |
|
|
| T |
31781429 |
aagttgggaacctgaaaagggttgggtcttggactctggatgctcttatcacatctgtc |
31781371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 181; Significance: 2e-97; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 149949 - 150245
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
149949 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
150048 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
150049 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
150148 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||| | | ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
150149 |
tttggactcgggatgctcttatcacatgagccctagaaaggaatattttgagactttgattctaaaagaaggaggagttgttcgactcggaaataac |
150245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0188 (Bit Score: 142; Significance: 4e-74; HSPs: 1)
Name: scaffold0188
Description:
Target: scaffold0188; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 13 - 270
Target Start/End: Original strand, 18933 - 19190
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
112 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||| | || ||||||||||| ||||||| |||||| || |
|
|
| T |
18933 |
aagtctaggtccaagggatttgacaaatcaaagtataaatgctttctttgtcacaagcaaggttattttaagaaggattgtccggataaggggggcgatg |
19032 |
T |
|
| Q |
113 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
212 |
Q |
| |
|
|||||| ||| || ||||||||| |||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || | ||| |
|
|
| T |
19033 |
gtagtccttcggtccaagttgcgaaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaagagataggt |
19132 |
T |
|
| Q |
213 |
tttggactcgggatgctcttatcacatgtgtcataggaatgaatattttgagactttg |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |
|
|
| T |
19133 |
tttggactcgggatgctcttatcacatgtgtcctagaaaggaatattttgagactttg |
19190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 127 - 308
Target Start/End: Complemental strand, 35989 - 35808
Alignment:
| Q |
127 |
caagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggat |
226 |
Q |
| |
|
|||||||||| ||| ||| ||||||||||||||| |||| |||||||||||||| | |||||| |||| ||||| |||||||||||||||||||| | |
|
|
| T |
35989 |
caagttgcggtggcctccggtgaagatggttatgaaagtgtcggtgcactagtggttacaagttgagaactagagaagagttgggttttggactcggggt |
35890 |
T |
|
| Q |
227 |
gctcttatcacatgtgtcataggaatgaatattttgagactttggctctaaaagaaggaggagttgttagactcggaaataa |
308 |
Q |
| |
|
|||||||||||||||||| || ||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
35889 |
gctcttatcacatgtgtcttatgaaggaatattttgagaatttggctctaaaagaaggaggagttgttcgactcggaaataa |
35808 |
T |
|
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Target: scaffold0355 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0355
Description:
Target: scaffold0355; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 871 - 966
Alignment:
| Q |
13 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggc |
108 |
Q |
| |
|
||||| || |||||||| ||| ||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| |
|
|
| T |
871 |
aagtctagatccaagggatttaacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggc |
966 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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