View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11709_high_1 (Length: 794)
Name: NF11709_high_1
Description: NF11709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11709_high_1 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 743; Significance: 0; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 743; E-Value: 0
Query Start/End: Original strand, 19 - 777
Target Start/End: Complemental strand, 1492646 - 1491888
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492646 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
1492547 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492546 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
1492447 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492446 |
acaactaacacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
1492347 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1492346 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtggtgcaaacgattaagtgagtaatctt |
1492247 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492246 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
1492147 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagttataa |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492146 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagttataa |
1492047 |
T |
|
| Q |
619 |
agaaataacatttattagtacaacagttttgggataataccaaactaattaatcacataataatatgttcataatgcacataattttcattgttaaatgt |
718 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492046 |
agaaataacatttatcagtacaacagttttgggataataccaaactaattaatcacataataatatgttcataatgcacataattttcattgttaaatgt |
1491947 |
T |
|
| Q |
719 |
tatagactatagttatatgtatgcaccgctacttagtggtgaataatactgctatttgt |
777 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1491946 |
tatagactatagttatatgtctgcaccgctacttagtggtgaataatactgctatttgt |
1491888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 21 - 612
Target Start/End: Complemental strand, 1505453 - 1504862
Alignment:
| Q |
21 |
tcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaataa |
120 |
Q |
| |
|
|||||||| ||||| |||||||| || ||||||||||| ||||||| ||| |||||||||||||| ||||||||||||| ||||| || |||||||| | |
|
|
| T |
1505453 |
tcaatggctccttcgctatcaggcgcgattgtttgtgcagtccaaaccatttcaaatataggtttctcaatttctggtattggatctgaaccaacaatta |
1505354 |
T |
|
| Q |
121 |
gtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaac |
220 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| || |
|
|
| T |
1505353 |
gtgcagcagctccatctccaaatagagcttgtccaacaaggctgtccaagtgagtatcactagggccgcgaaatgtgactgcagtgacttcggaacagac |
1505254 |
T |
|
| Q |
221 |
aactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctt |
320 |
Q |
| |
|
||| | |||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||| || |
|
|
| T |
1505253 |
aaccaacacacgggcacctttgttgttctcagccaagtccttggccaaacgaagcaccgtcccacctgcaaaacatccttgctggtacatcatgtacctc |
1505154 |
T |
|
| Q |
321 |
tttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttg |
420 |
Q |
| |
|
|| |||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
1505153 |
ttcacatatgggcgaagacctaagagtttggtgagttggtaatcagctccaggcatgtctacaccacttgtggtgcaaacaattaagtgagtaatctttg |
1505054 |
T |
|
| Q |
421 |
actttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaagg |
520 |
Q |
| |
|
||||||| |||||||||||||||||||| || || ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1505053 |
actttggctgaccccattcttttatagcttttacggcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaagg |
1504954 |
T |
|
| Q |
521 |
tgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaag |
612 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||| |
|
|
| T |
1504953 |
tgccatgtattcacaaacactgggattctcttttaaaatctcctctgttaggtacatgtatcttctcttaatcatagatttatcacctgaag |
1504862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 21 - 630
Target Start/End: Complemental strand, 1482669 - 1482057
Alignment:
| Q |
21 |
tcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaataa |
120 |
Q |
| |
|
|||||||| || ||||| || ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| || ||||| |||||||| | |
|
|
| T |
1482669 |
tcaatggccccctcactgtctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggtattgggtcagaaccaacaatga |
1482570 |
T |
|
| Q |
121 |
gtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaac |
220 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
1482569 |
gtgcagcagctccatctccaaagagtgcttgtccaacaagactgtccaaatgagtatcactaggaccacggaatgtcactgcagtaacttcagaacaaac |
1482470 |
T |
|
| Q |
221 |
aactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctt |
320 |
Q |
| |
|
||| | ||||||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
1482469 |
aaccaacacacgagcacctttattattctcagccaagtccttggccaaacgaagcaccgtcccacctgcaaagcatccttgttggtacatcatgtatctc |
1482370 |
T |
|
| Q |
321 |
tttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttg |
420 |
Q |
| |
|
|| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| || |||| |||||||| |||||||||| |
|
|
| T |
1482369 |
ttcacatatggacgaagacctaagagttttgtgagttggtaatcggcaccaggcatgtctacaccacttgtggtacaaaatattaagtgtgtaatctttg |
1482270 |
T |
|
| Q |
421 |
actttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaagg |
520 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1482269 |
attttggttggccccattcttttatagccttcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtcttgcctagcatccaatgaagg |
1482170 |
T |
|
| Q |
521 |
tgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctga---agttata |
617 |
Q |
| |
|
|||||||||||| || ||| ||||||| ||||| |||||||| || || |||||||||||||| || |||||||| ||||| |||||||| ||||||| |
|
|
| T |
1482169 |
tgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctcttgatcatagatttatcacctgaagtagttata |
1482070 |
T |
|
| Q |
618 |
aagaaataacatt |
630 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
1482069 |
aagaaatatcatt |
1482057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 19 - 613
Target Start/End: Complemental strand, 1478477 - 1477883
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||| || ||||| || ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| || ||||| |||||||| |
|
|
| T |
1478477 |
catcaatggctccctcactgtctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggtattgggtcagaaccaacaat |
1478378 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||| |||||||| |||||||||||| |
|
|
| T |
1478377 |
gagtgcagcagcaccatctccaaatagtgcttgtccaacaagactgtccaaatgagtatcactaggaccacggaatgtcactgcagtaacttcagaacaa |
1478278 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||| | ||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| ||||| ||||||||||| || | |
|
|
| T |
1478277 |
acaaccaacacacgagcacctttattgttctcagccaagtccttggccaaacgaagcaccgtcccacctgcaaaacatccttgttggtacatcatatacc |
1478178 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
| || |||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||| ||||| ||||||| ||| ||||| |||||||| |
|
|
| T |
1478177 |
tcttcacatatggacgaagacctaagagtttggtgagttggtaatcagcgccaggcatgtctacaccacttgtggtgcaaaagatcaagtgtgtaatctt |
1478078 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
1478077 |
tgattttggttggccccattcttttatagctttcactgcagcctcctttcctagtctaggtacttctaccaccaccatgtcctgcctagcatccaatgac |
1477978 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagt |
613 |
Q |
| |
|
||||||||||||||||| ||| | ||||| ||||| ||||| || || || |||||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
1477977 |
ggtgccatgtattcacatacacttggattttctttcaaaatttcttcggtaagatacatgtatctcctcttgatcatggatttatcacctgaagt |
1477883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 21 - 611
Target Start/End: Complemental strand, 1509600 - 1509009
Alignment:
| Q |
21 |
tcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaataa |
120 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| ||| |||||||||||||| || |||| |||||||| | |
|
|
| T |
1509600 |
tcaatggcaccttcactatttggagcaattgtttgtgcagtccaaaccatctcaaatatagatttctcaatttctggtacagggtcagtaccaacaatga |
1509501 |
T |
|
| Q |
121 |
gtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaac |
220 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||||||||||| || ||||||| || |||| ||||||||||||| |||||| ||||||||| |
|
|
| T |
1509500 |
gtgcagcagctccatctccaaataatgcttgtccaacaagactgtccaaatgagtatcaccagggccacaaaatgtgactgcaatgactttagaacaaac |
1509401 |
T |
|
| Q |
221 |
aactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctt |
320 |
Q |
| |
|
||| | |||||||||| ||| ||| || |||||||||||||| |||||| |||| || ||||||||||||||||| | ||| |||||||||||||| ||| |
|
|
| T |
1509400 |
aaccaacacacgagcatcttggttattttcagccaaatcctttgccaaatgaagcacagtgccacctgcaaaacacctttgttggtacatcatgtacctt |
1509301 |
T |
|
| Q |
321 |
tttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttg |
420 |
Q |
| |
|
||||||||||| |||||||||| ||||| || |||||||||| || |||| ||| || ||||| ||||| ||||||| |||||| || |||||||||| |
|
|
| T |
1509300 |
tttacatatgggtgaagacctaaaagtttggtaagttgataatgagctccagacatatcaacaccacttgtggtgcaaaagattaaatgtgtaatctttg |
1509201 |
T |
|
| Q |
421 |
actttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaagg |
520 |
Q |
| |
|
| ||||| || ||||||||||||||||||||||||||| |||| || ||||| |||||||| | ||| |||||||||||||| |||||||||||||| || |
|
|
| T |
1509200 |
attttggctggccccattcttttatagccttcactgcaacctcttttcctagcctaggtacctttacaaccaccatgtcttgcctagcatccaatgatgg |
1509101 |
T |
|
| Q |
521 |
tgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttct-tttgatcatggatttgtcacctgaa |
611 |
Q |
| |
|
|||| | || |||||||||| ||||||||||| |||||||| ||||| | |||||||||||| || || |||||| ||||| ||||||||| |
|
|
| T |
1509100 |
tgccgtataagcacaaacattgggattctctttcaaaatctcttctgtaatatacatgtatctcctcttagatcatcgatttatcacctgaa |
1509009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 30 - 522
Target Start/End: Complemental strand, 1499707 - 1499215
Alignment:
| Q |
30 |
ccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaataagtgcagctg |
129 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||| | |||||||| |||||| |||||||| ||||| | ||||| |||||||| | ||| || | |
|
|
| T |
1499707 |
ccttcactatcagaagcaattgtttgtgcagtccaaactaactcaaataaaggtttctcaatttcaggtactaggtcagagccaacaatgactgccgcag |
1499608 |
T |
|
| Q |
130 |
ctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaacaactagcac |
229 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||| | ||| |||| ||| || |||| ||||| || |||||||| ||||||||||||||| | ||| |
|
|
| T |
1499607 |
ctccatctccaaatattgcttgtccaacaagtttgtgtaggtgagtattactaggtccacaaaatgagattgcagtgatttcagaacaaacaaccaacac |
1499508 |
T |
|
| Q |
230 |
acgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctttttacatat |
329 |
Q |
| |
|
||||||||||||||| |||||||| || ||||| |||||||||||||| || ||||||||| |||| ||| | |||||||||||||| ||||| |||||| |
|
|
| T |
1499507 |
acgagcacctttgttattctcagctaagtccttcgccaaacgaagtactgttccacctgcataacaccctagttggtacatcatgtaccttttcacatat |
1499408 |
T |
|
| Q |
330 |
ggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttgactttggtt |
429 |
Q |
| |
|
|| ||||||||||||||| || ||||| ||||| || ||||||||||||||||| || ||||||| ||||| || ||||| |||||||| |||| |
|
|
| T |
1499407 |
gggttaagacctaagagttttgttagttggtaatccgcaccaggcatgtctacaccactataggtgcaaaaaattaaatgtgtaatatttgacttcggtt |
1499308 |
T |
|
| Q |
430 |
gaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaaggtg |
522 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||| ||||||| |
|
|
| T |
1499307 |
gaccccattcttcgatagccttcactgcagcctccttccctagtctaggtatctctaccgccatcatgtcttgcctagcatccaaagaaggtg |
1499215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 31 - 613
Target Start/End: Complemental strand, 1487136 - 1486554
Alignment:
| Q |
31 |
cttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaataagtgcagctgc |
130 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||||||| | |||||| | |||||| ||||||| || || |||||| || |||||||| | | || | || |
|
|
| T |
1487136 |
cttcactatctagagctattgtttgtgcagtccaaacaagctcaaagagaggtttctcaatttttgatatcggatcggagccaacaatgactacaacagc |
1487037 |
T |
|
| Q |
131 |
tccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaat-gtgactgcagtgacttcagaacaaacaactagcac |
229 |
Q |
| |
|
|||||| ||||||| ||||||||||||||| || || || || ||| | || |||| |||| |||| || ||||||||||||||| | || | ||| |
|
|
| T |
1487036 |
tccatcaccaaataatgcttgtccaacaaggttgctcatgtcagtttcattagggccacaaaatagtga-tgtagtgacttcagaacatattaccaacac |
1486938 |
T |
|
| Q |
230 |
acgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctttttacatat |
329 |
Q |
| |
|
| ||||| |||| |||||||||||||| ||||| ||| |||| || || ||||| |||||||| || ||||| ||||| ||||| || | ||| |||| |
|
|
| T |
1486937 |
aagagcatctttattgttctcagccaagtccttggcctaacgtagaacagtgccccctgcaaagcatccttgttggtatatcatataccgtttcacatcc |
1486838 |
T |
|
| Q |
330 |
ggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttgactttggtt |
429 |
Q |
| |
|
|| | ||||||||||||||| |||||||| |||||||| ||||||||| ||| ||| || | ||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
1486837 |
gggcaaagacctaagagttttgtgagttggtaatcggcaccaggcatgcctataccactcatggtgcaaaatattaagtgtgtaatctttgactttggtt |
1486738 |
T |
|
| Q |
430 |
gaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaaggtgccatgta |
529 |
Q |
| |
|
| ||| ||||||||||||| |||||||||||||| || ||||| ||||| || ||| ||||||||||||||| ||||||||||| ||||||| ||| || |
|
|
| T |
1486737 |
ggccctattcttttatagctttcactgcagcctcatttcctagcctaggcacgtctcgcaccaccatgtcttgcctagcatccaaagaaggtgtcatata |
1486638 |
T |
|
| Q |
530 |
ttcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagt |
613 |
Q |
| |
|
|||| ||||||||||||||| ||||| | |||||| | |||||||||||||| |||||||| ||||| |||||| |||| |
|
|
| T |
1486637 |
agtgcaaaaattaggattctctttcaaaatagcttctgtttggtacatgtatcttctcttgatcattgatttttcacctaaagt |
1486554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 415; Significance: 0; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 19 - 613
Target Start/End: Complemental strand, 5310875 - 5310281
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| || ||||| |||||||| |
|
|
| T |
5310875 |
catcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggtactgggtcagaaccaacaat |
5310776 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
||| ||||| |||||||||||||| | |||||| |||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
5310775 |
aagagcagcagctccatctccaaacaatgcttgcccaacaaggctgtccaagtgagtatcactggggccacgaaatgtgacagcggtgacttcagaacaa |
5310676 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || | |
|
|
| T |
5310675 |
acaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacgaagcaccgtgccacctgcaaaacacccttgttggtacatcatatacc |
5310576 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
|||| |||||||||||||| || |||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
5310575 |
ttttcacatatggacgaaggcccaagagttttgtgagttgataatcagctccaggcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctt |
5310476 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||||||||| |
|
|
| T |
5310475 |
tgactttggttgaccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgccttgcatccaatgaa |
5310376 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagt |
613 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
5310375 |
ggtgccatgtattcacaaacactaggattttctttcaaaatctcctctgttagatacatgtatctcctcttgatcatagatttatcacctgaagt |
5310281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 19 - 613
Target Start/End: Complemental strand, 5315589 - 5314995
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||| || ||||| |||||||| |
|
|
| T |
5315589 |
catcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctctatttctggtactgggtcagagccaacaat |
5315490 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
5315489 |
aagagcagccgctccatctccaaatagtgcttgtccaacaaggctgtctaagtgagtatcactaggaccacgaaatgtgacagcggtgacttcagaacaa |
5315390 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
5315389 |
acaaccaacacacgagcacctttgttgttctcagccaaatctttagccaaacggagcaccgtgccacctgcaaagcacccttgttggtacatcatgtatc |
5315290 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||| |||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
5315289 |
ttttcacatatgggcgaagacctaatagtttggtgagttgataatctgctccaggcatgtcaacaccacttgtggtgcaaacgattaagtgagtaatctt |
5315190 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5315189 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaa |
5315090 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagt |
613 |
Q |
| |
|
|| |||||||||||||||||| ||||||| ||||| ||||| || |||||||||||||||||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
5315089 |
ggggccatgtattcacaaacactaggattttctttcaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagt |
5314995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 19 - 613
Target Start/End: Original strand, 5289341 - 5289935
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| || ||||| |||||||| |
|
|
| T |
5289341 |
catcaatggctccttcactatccggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggtactgggtcagaaccaacaat |
5289440 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
||| ||||| |||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||| || ||||||||||||||| |
|
|
| T |
5289441 |
aagagcagcagctccatctccaaacagtgcttgcccaacaaggctgtccaagtgagtatcactggggccacggaatgtgacagcggtgacttcagaacaa |
5289540 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || | |
|
|
| T |
5289541 |
acaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacgaagcaccgtgccacctgcaaaacacccttgttggtacatcatatacc |
5289640 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
5289641 |
ttttcacatatggacgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctt |
5289740 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5289741 |
tgactttggttgaccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaa |
5289840 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagt |
613 |
Q |
| |
|
|| |||||||||||||||||| | ||||| ||||| ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
5289841 |
ggggccatgtattcacaaacacttggattttctttcaaaatttcttctgttagatacatgtatctcctcttgatcatggatttatcacctgaagt |
5289935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 19 - 613
Target Start/End: Complemental strand, 5302974 - 5302380
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| || ||||| |||||||| |
|
|
| T |
5302974 |
catcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggtacggggtcagagccaacaat |
5302875 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| || ||||| || ||||| |
|
|
| T |
5302874 |
aagagcagcagctccatctccaaatagtgcttgtccaacaagactgtccaagtgagtatcactagggccacgaaatgtgacagcggtgacctctgaacat |
5302775 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||| | ||| || ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| | |
|
|
| T |
5302774 |
acaaccaacacacgagcacctttgttgttctcagctagatctttggccaaacgaagcaccgtgccacctgcaaaacacccttgttggtacatcatgtacc |
5302675 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
|||| |||||||| |||||||| |||||||| |||||||||||||| || | |||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
5302674 |
ttttcacatatgggcgaagacccaagagtttggtgagttgataatcagcttcgggcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctt |
5302575 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5302574 |
tgactttggttgaccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaa |
5302475 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagt |
613 |
Q |
| |
|
|| |||||||||||||||||| ||||||| ||||| ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
5302474 |
ggggccatgtattcacaaacactaggattttctttcaaaatttcttctgttagatacatgtatctcctcttgatcatggatttatcacctgaagt |
5302380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 19 - 613
Target Start/End: Complemental strand, 5284786 - 5284192
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | ||||||||||||| || ||||| |||||||| |
|
|
| T |
5284786 |
catcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtctctcaatttctggtattgggtcagagccaacaat |
5284687 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| || || |||||||||||||| || ||||||||||||||| |
|
|
| T |
5284686 |
aagagcagcagctccatctccaaatagtgcttgtccaacaagactgtctaagtgagtatcgctagggccacgaaatgtgacagcggtgacttcagaacaa |
5284587 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | |
|
|
| T |
5284586 |
acaaccaacacacgagcacctttgttgttctcagctaaatctttggccaaacgaagtaccgtaccacctgcaaaacacccttgttggtacatcatgtacc |
5284487 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
|||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
5284486 |
ttttcacatatgggcgaagacccaagagtttggtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctt |
5284387 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||||||||| |
|
|
| T |
5284386 |
tgactttggttggccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtcttgccttgcatccaatgaa |
5284287 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaagt |
613 |
Q |
| |
|
|| |||||||||||||||||| ||||||| | ||| ||||| || |||||||||||||||||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
5284286 |
ggggccatgtattcacaaacactaggattttttttcaaaatttcttctgttagatacatgtatctcctcttgatcatagatttatcacctgaagt |
5284192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 19 - 612
Target Start/End: Original strand, 46706632 - 46707225
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||||||| |
|
|
| T |
46706632 |
catcaatggctccttcactatctggagcaattgtttgtgaagtccaaaccatctcaaatataggtttctcaatttctggtactggatcagaaccaacaat |
46706731 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
||||||||| |||| ||||||| |||||||| |||||||| ||||||||||| |||||||| || || || ||||||||||||||||||||||||||| |
|
|
| T |
46706732 |
aagtgcagcagctctgactccaaacagtgcttgcccaacaaggctgtccaagtgagtatcactagggccgcggaatgtgactgcagtgacttcagaacaa |
46706831 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||| | ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| |||||||| ||||||||||| || | |
|
|
| T |
46706832 |
acaaccaatacacgggcacctttgttgttctcagccaaatcgttagccaaacgaagccccgtgcctcctgcaaagcaaccttgttggtacatcatatacc |
46706931 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
|||| |||||||| |||||||| |||||||| |||||||| ||||| || ||||||||||||||||| || |||||||||||||||||||| |||||||| |
|
|
| T |
46706932 |
ttttcacatatgggcgaagaccgaagagttttgtgagttggtaatcagctccaggcatgtctacaccactagtagtgcaaacgattaagtgggtaatctt |
46707031 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| |
|
|
| T |
46707032 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctggcatccaatgaa |
46707131 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaag |
612 |
Q |
| |
|
|||||||| |||||||||||| | ||||||||||| |||||||||| |||||| ||||||||||| || |||||||| ||||| |||||||||| |
|
|
| T |
46707132 |
ggtgccatatattcacaaacactgggattctctttcaaaatctcctatgttaggtacatgtatctcctcttgatcatagatttatcacctgaag |
46707225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 183 - 385
Target Start/End: Original strand, 32530816 - 32531018
Alignment:
| Q |
183 |
ggaccacgaaatgtgactgcagtgacttcagaacaaacaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgc |
282 |
Q |
| |
|
|||||||| || || |||||||||| ||||||||||||||| || || | ||| |||||| |||||||| | ||| || || || || || || |||| |
|
|
| T |
32530816 |
ggaccacggaaagtaactgcagtgatttcagaacaaacaacaagaactcttgcatttttgttattctcagcaagatctttcgctaagcggagaactgtgc |
32530915 |
T |
|
| Q |
283 |
cacctgcaaaacaaccttgctggtacatcatgtatctttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctac |
382 |
Q |
| |
|
| ||||| ||||||||||| || ||||||||| | ||| ||| |||| || |||||||||||||||||||| |||||||| || ||||||||||| |
|
|
| T |
32530916 |
cgcctgcgaaacaaccttgttgatacatcatgagacgtttgacagatggttttaggcctaagagtttagtgagttggtaatcggcacccggcatgtctac |
32531015 |
T |
|
| Q |
383 |
acc |
385 |
Q |
| |
|
||| |
|
|
| T |
32531016 |
acc |
32531018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 400; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 21 - 612
Target Start/End: Complemental strand, 44141677 - 44141086
Alignment:
| Q |
21 |
tcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaataa |
120 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||||| ||||| || |||||||| | |
|
|
| T |
44141677 |
tcaatggccccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaatttctggtactggatctgaaccaacaatta |
44141578 |
T |
|
| Q |
121 |
gtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaac |
220 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| || || ||||||||||||||||||||||||||||| || |
|
|
| T |
44141577 |
gtgcagcagctccatctccaaatagtgcttgtccaacaaggctgtccaagtgagtatcactagggccgcgaaatgtgactgcagtgacttcagaacagac |
44141478 |
T |
|
| Q |
221 |
aactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctt |
320 |
Q |
| |
|
||| | ||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||||| || ||| |
|
|
| T |
44141477 |
aaccaacacacgagcacctttgttgttttcagctaaatctttagccaaacgaaggaccgtgcctcctgcaaagcaaccttgttggtacatcatatacctt |
44141378 |
T |
|
| Q |
321 |
tttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttg |
420 |
Q |
| |
|
|| |||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||||||||| ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
44141377 |
ttcacatatgggcgaagacctaagagttttgtgagttggtaatcagctccaggcatgtctacaccacttgtggtgcaaacgatcaagtgagtaatctttg |
44141278 |
T |
|
| Q |
421 |
actttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaagg |
520 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
44141277 |
actttggttgaccccattcttttatggccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaagg |
44141178 |
T |
|
| Q |
521 |
tgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaag |
612 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||| || |||||||| ||||| |||||||||| |
|
|
| T |
44141177 |
tgccatgtattcacaaacactaggattctctttcaaaatctcctctgttaggtacatatatctcctcttgatcatagatttatcacctgaag |
44141086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 19 - 612
Target Start/End: Complemental strand, 44129052 - 44128459
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||||| ||||| || |||||||| |
|
|
| T |
44129052 |
catcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaatttctggtactggatctgaaccaacaat |
44128953 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
|||||||| ||||||||||||||||| || ||||||||||| ||||||||||| |||||||| || || ||||||||||||||||||||||||||||| |
|
|
| T |
44128952 |
tagtgcagcagctccatctccaaatagggcctgtccaacaaggctgtccaagtgagtatcactagggccgcgaaatgtgactgcagtgacttcagaacag |
44128853 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||| | ||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||||| || | |
|
|
| T |
44128852 |
acaaccaacacacgagcacctttgttgttttcagctaaatctttagccaaacgaaggaccgtgcctcctgcaaagcaaccttgttggtacatcatatacc |
44128753 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||||||||| ||||| ||||||||||| |||||||||||||| |
|
|
| T |
44128752 |
ttttcacatatgggcgaagacctaagagttttgtgagttggtaatcagctccaggcatgtctacaccacttgtggtgcaaacgatcaagtgagtaatctt |
44128653 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
44128652 |
tgactttggttgaccccattcttttatggccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaa |
44128553 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaag |
612 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||| || |||||||| ||||| |||||||||| |
|
|
| T |
44128552 |
ggtgccatgtattcacaaacactaggattctctttcaaaatctcctctgttaggtacatatatctcctcttgatcatagatttatcacctgaag |
44128459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 19 - 612
Target Start/End: Complemental strand, 44133257 - 44132664
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||||| ||||| || |||||||| |
|
|
| T |
44133257 |
catcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaatttctggtactggatctgaaccaacaat |
44133158 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
|||||||| ||||||||||||||||| || ||||||||||| ||||||||||| |||||||| || || ||||||||||||||||||||||||||||| |
|
|
| T |
44133157 |
tagtgcagcagctccatctccaaatagggcctgtccaacaaggctgtccaagtgagtatcactagggccgcgaaatgtgactgcagtgacttcagaacag |
44133058 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
||||| | ||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||||| || | |
|
|
| T |
44133057 |
acaaccaacacacgagcacctttgttgttttcagctaaatctttagccaaacgaaggaccgtgcctcctgcaaagcaaccttgttggtacatcatatacc |
44132958 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||||||||| ||||| ||||||||||| |||||||||||||| |
|
|
| T |
44132957 |
ttttcacatatgggcgaagacctaagagttttgtgagttggtaatcagctccaggcatgtctacaccacttgtggtgcaaacgatcaagtgagtaatctt |
44132858 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
44132857 |
tgactttggttgaccccattcttttatggccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcctagcatccaatgaa |
44132758 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaag |
612 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||| || |||||||| ||||| |||||||||| |
|
|
| T |
44132757 |
ggtgccatgtattcacaaacactaggattctctttcaaaatctcctctgttaggtacatatatctcctcttgatcatagatttatcacctgaag |
44132664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 30 - 624
Target Start/End: Original strand, 24163445 - 24164042
Alignment:
| Q |
30 |
ccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaataagtgcagctg |
129 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||| | |||||||| |||||| |||||||| ||| || ||||| |||||||| | |||||| | |
|
|
| T |
24163445 |
ccttcactatttggagcgattgtttgtgctgtccaaactaactcaaatagaggtttctcaatttcctgtattgggtcagagccaacaatgactgcagcag |
24163544 |
T |
|
| Q |
130 |
ctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaacaactagcac |
229 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| ||||| ||||| || || |||| |||||||| ||| || ||||||||||||||||| | ||| |
|
|
| T |
24163545 |
ctccatctccaaatagagcttgtccaacaaggttgtctaagtgagtatcgcttggtccacaaaatgtgattgcggtaacttcagaacaaacaaccaacac |
24163644 |
T |
|
| Q |
230 |
acgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctttttacatat |
329 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||| || ||||||||| || |
|
|
| T |
24163645 |
acgagaacctttgttgttctcagccaagtccttggccaagcgaagtaccgtgccacctgcaaaacacccttgttggtacatcatatacctttttacacat |
24163744 |
T |
|
| Q |
330 |
ggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttgactttggtt |
429 |
Q |
| |
|
|| ||||||||||||||||| |||||||| |||||||| |||||||| |||||||| ||| ||||||||| |||||||| || |||||||||||||||| |
|
|
| T |
24163745 |
gggcgaagacctaagagttttgtgagttggtaatcggcaccaggcatatctacaccacttatagtgcaaaatattaagtgtgtgatctttgactttggtt |
24163844 |
T |
|
| Q |
430 |
gaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaaggtgccatgta |
529 |
Q |
| |
|
| ||||||||||||||||||||||| || |||||||| |||||||| ||| | ||||| |||||||||||||| |||| |||||| ||||||||||| || |
|
|
| T |
24163845 |
ggccccattcttttatagccttcacggctgcctcctttcctagtcttggtgcctctactaccaccatgtcttgcctagtatccaaagaaggtgccatata |
24163944 |
T |
|
| Q |
530 |
ttcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctga---agttataaagaaat |
624 |
Q |
| |
|
|| | |||||||||||||| |||||||| || ||||| ||||||||||| || |||||||| | ||| |||||| | |||||||||||||| |
|
|
| T |
24163945 |
agtgcacaagttaggattctctttcaaaatctcttcggttaggtacatgtatctcctcttgatcatagttttatcacctaaaatagttataaagaaat |
24164042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 153; Significance: 1e-80; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 19 - 611
Target Start/End: Original strand, 37863034 - 37863626
Alignment:
| Q |
19 |
catcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggtaccggatcagacccaacaat |
118 |
Q |
| |
|
||||||| || ||||||||||| ||| | ||||||||||| ||||||| || ||||| | ||| || |||| |||||| | |||||| || |||||||| |
|
|
| T |
37863034 |
catcaatagctccttcactatctggaacgattgtttgtgcagtccaaaccaattcaaacaaaggcttctcaacttctggcaacggatctgaaccaacaat |
37863133 |
T |
|
| Q |
119 |
aagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaa |
218 |
Q |
| |
|
| || ||||| ||||||||||| | ||| || || |||||||| || | || |||||||| || ||||| || || |||||||||| || |||||| |
|
|
| T |
37863134 |
cacagctgctgcaccatctccaaacaatgcctgccccacaagactatcaagatgagtatcactaggtccacggaaagtaactgcagtgatctccgaacaa |
37863233 |
T |
|
| Q |
219 |
acaactagcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatc |
318 |
Q |
| |
|
|| || | |||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||| || |||||||| || | |
|
|
| T |
37863234 |
accaccaaaacacgagcgcctttgttgttttcagccaaatctttagccaaacgaagcaccgtcccaccagcaaaacaaccttgttgatacatcatataac |
37863333 |
T |
|
| Q |
319 |
tttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctt |
418 |
Q |
| |
|
|| ||||| || |||||||| ||||| || ||||| ||||| || || |||||||| || ||||| ||||| ||||||| |||| ||||||||||| |
|
|
| T |
37863334 |
gcttcacatacgggcgaagacccaagagctttgtgagctgatagtcagcaccaggcatatccacaccacttgtggtgcaaaaaattagatgagtaatctt |
37863433 |
T |
|
| Q |
419 |
tgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaa |
518 |
Q |
| |
|
|||||| |||||||||||||| || |||||||| ||||||||| || ||||| | |||||||| || |||||||| || ||||| |||||||| ||| |
|
|
| T |
37863434 |
tgacttaggttgaccccattccttgatagcctttgttgcagcctcttttcctagctttggtacttccacaaccaccatatcctgtcttgcatccaacgaa |
37863533 |
T |
|
| Q |
519 |
ggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaa |
611 |
Q |
| |
|
|||||||| || ||||| | | |||||||||| || |||||||| || || | || ||||||||| | || ||||| ||||| ||||||||| |
|
|
| T |
37863534 |
ggtgccatatactcacataaactaggattctccttcaaaatctcttcagtcaaatgcatgtatctcttcttaatcatagatttatcacctgaa |
37863626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 126 - 611
Target Start/End: Original strand, 37859115 - 37859600
Alignment:
| Q |
126 |
gctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaacaacta |
225 |
Q |
| |
|
||||| ||||||||||| | |||||| || ||||| || || | || || |||||||| ||||| || || |||||||| | || |||||||| || | |
|
|
| T |
37859115 |
gctgcaccatctccaaacaatgcttgccccacaaggctatcaagatgagtgtcactgggtccacggaaagtaactgcagttatctctgaacaaactacca |
37859214 |
T |
|
| Q |
226 |
gcacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctttttac |
325 |
Q |
| |
|
||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| | || || |
|
|
| T |
37859215 |
acacacgagcacctttgttgttttcagccaagtctttagccaaacgaagcaccgtgccaccagcaaaacaaccttgttggtacatcatgtaacgcttcac |
37859314 |
T |
|
| Q |
326 |
atatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttgacttt |
425 |
Q |
| |
|
|||||||||||| || ||||| || || || ||||| ||||| || |||||||| || || || || ||||||| ||| | ||| |||||||| ||||| |
|
|
| T |
37859315 |
atatggacgaaggcccaagagctttgtcagctgatagtcggcaccgggcatgtccacgccactggtggtgcaaaagatgaggtgggtaatcttggactta |
37859414 |
T |
|
| Q |
426 |
ggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaaggtgcca |
525 |
Q |
| |
|
|||||||||||||| || || ||||| ||| ||||| || |||||||| ||||| || || ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37859415 |
ggttgaccccattccttgatggcctttgttgctgcctcttttcctagtcttggtacctccacaaccaccatgtcttgtcttgcatccaatgaaggtgcca |
37859514 |
T |
|
| Q |
526 |
tgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacctgaa |
611 |
Q |
| |
|
|||| || || ||| | ||||||||||| | ||||| ||||| | ||||||||||| | |||||||| || || ||||||||| |
|
|
| T |
37859515 |
tgtactcgcatacacttggattctctttcaggatctcttctgtcaagtacatgtatctcttcttgatcattgacttatcacctgaa |
37859600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 227 - 608
Target Start/End: Complemental strand, 39030341 - 39029960
Alignment:
| Q |
227 |
cacacgagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctttttaca |
326 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||| ||||| || | |||| |||||||||||||| ||||||||||| || | |||||| |
|
|
| T |
39030341 |
cacacgggcacctttgttgttctcagccaaatctttagccaagcgaagagccatcgcaccagcaaaacaaccttgttggtacatcatataacgctttaca |
39030242 |
T |
|
| Q |
327 |
tatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttgactttg |
426 |
Q |
| |
|
||||||| ||| |||||||| || ||||| ||||| || || |||||||| || ||||| |||| |||||||| || | ||||||| | ||||||| | |
|
|
| T |
39030241 |
tatggacaaaggcctaagagctttgtgagctgatagtcagctccaggcatatcgacaccacttgaagtgcaaaatatgagatgagtaaccattgacttag |
39030142 |
T |
|
| Q |
427 |
gttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaaggtgccat |
526 |
Q |
| |
|
||||||||||||| || |||||||| | ||| || || || || || | |||||||| | ||||| ||||| ||||| |||||||| ||||||||||| |
|
|
| T |
39030141 |
gttgaccccattcattgatagcctttattgctgcttcttttccgagctttggtacttcctcaaccacaatgtcctgtcttgcatccaaagaaggtgccat |
39030042 |
T |
|
| Q |
527 |
gtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatcttcttttgatcatggatttgtcacct |
608 |
Q |
| |
|
| ||||||| | | |||||||| || || || | ||||| | || ||||||||| | || ||||| |||||||||||| |
|
|
| T |
39030041 |
aaactcacaaaaacttggattctccttcaatatttgttctgtcaaatgcatgtatctcttcttaatcatagatttgtcacct |
39029960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 40421675 - 40421850
Alignment:
| Q |
132 |
ccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaacaactagcacac |
231 |
Q |
| |
|
||||| ||||| |||||||||||||| | | ||||||||||| ||| |||| |||||||| || || |||| | ||||||||| ||||| || |||| |
|
|
| T |
40421675 |
ccatcaccaaaaagtgcttgtccaactaaagaatccaagtgtgtttcattgggcccacgaaaagtaacaacagttatttcagaacacacaacgaggacac |
40421774 |
T |
|
| Q |
232 |
gagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggta |
307 |
Q |
| |
|
| ||||| |||| |||||||| | ||| || || | |||||| || || ||||| ||| |||||||||| ||||| |
|
|
| T |
40421775 |
gtgcaccaatgttattctcagctagatctttggcaagacgaagaacggttccaccagcataacaaccttggtggta |
40421850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 132 - 581
Target Start/End: Complemental strand, 35251176 - 35250727
Alignment:
| Q |
132 |
ccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaacaactagcacac |
231 |
Q |
| |
|
||||||||||| | ||||||||| || ||||| || | || || ||||| || |||||||| || |||||||||| || |||||||| || || |||| |
|
|
| T |
35251176 |
ccatctccaaacaatgcttgtcccacgagactatcaagatgggtgtcactagggccacgaaaagtcactgcagtgatctctgaacaaaccacaagaacac |
35251077 |
T |
|
| Q |
232 |
gagcacctttgttgttctcagccaaatccttagccaaacgaagtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctttttacatatgg |
331 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||| ||| | ||||| || ||||| ||||| ||||||||||| || | ||| || | || |
|
|
| T |
35251076 |
gagcacctttattgttctcagccaaatctttagccaaacgaagaaccataccaccagcgaaacacccttgttggtacatcatataacgtttcaccgacgg |
35250977 |
T |
|
| Q |
332 |
acgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtagtgcaaacgattaagtgagtaatctttgactttggttga |
431 |
Q |
| |
|
|||||| |||| | ||| ||||| |||||||| || |||||||| || ||||| || ||| |||||| || | |||||| ||||| |||||||||||| |
|
|
| T |
35250976 |
acgaagtcctagcaattttgtgagctgataatcagcaccaggcatatccacaccactagtaatgcaaaatatgaggtgagtgatcttggactttggttga |
35250877 |
T |
|
| Q |
432 |
ccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtcttgtctagcatccaatgaaggtgccatgtatt |
531 |
Q |
| |
|
|||||||| || || || || ||| || || || |||| || || || ||||| |||||||| |||||||| ||||||||||| ||||||||||| |
|
|
| T |
35250876 |
ccccattccttgatcgcttttgttgctgcttcttttcctaaccttggcacctctactaccaccatatcttgtcttgcatccaatgatggtgccatgtaag |
35250777 |
T |
|
| Q |
532 |
cacaaacattaggattctcttttaaaatctcctctgttagatacatgtat |
581 |
Q |
| |
|
|||| | ||| ||||| ||||| | ||| |||||||||| || ||||||| |
|
|
| T |
35250776 |
cacacatattgggattttctttcagaatttcctctgttaaatgcatgtat |
35250727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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