View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11709_high_12 (Length: 242)
Name: NF11709_high_12
Description: NF11709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11709_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 187358 - 187134
Alignment:
| Q |
1 |
taagatccactatcagtaattaaaattgtgagtaaactgttatgtttcatacttttttcttactcgttgacttatcaatggtttaactgttgaaagtcaa |
100 |
Q |
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| T |
187358 |
taagatccactatcagtaattaaaattgtgagtaaactgttatgtttcatacttttttcttactcgttgacttatcaatggtttaactgttgaaagtcaa |
187259 |
T |
|
| Q |
101 |
acaatggtttccttattcaaaatttcaggggttgatgaaacttggaagcaattgagtaggtatatatcaaacatcgtaagttctatggttcgattttagg |
200 |
Q |
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| T |
187258 |
aaaatggtttccttattcaaaatttcaggggttgatgaaacttggaagcaattgagtaggtatatatcaaacatcgtaagttctatggtttgattttagg |
187159 |
T |
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| Q |
201 |
atttatgtcgttgataattatagtg |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
187158 |
atttatgtcgttgataattatagtg |
187134 |
T |
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