View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11709_low_17 (Length: 205)
Name: NF11709_low_17
Description: NF11709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11709_low_17 |
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Alignment Details
Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 10768645 - 10768470
Alignment:
| Q |
11 |
agcaaaggcaaagtctagagtaatgcaaaaaacttcaccatcaccatcttcaatttctgcaaggaagaggctttctttccctgcttctccagttggttcg |
110 |
Q |
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| T |
10768645 |
agcaaaggcaaagtctagagtaatgcaaaaaacttcaccatcaccatcttcaatttctgcaaggaagaggctttctttccctgcttctccggttggttcg |
10768546 |
T |
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| Q |
111 |
agacggcactctggtccacctaaggtggaaatataagagttagcaagtgtgacaaccgacactttagattgaagat |
186 |
Q |
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| T |
10768545 |
agacggcactctggtccacctaaggtggaaatataagagttagcaagtgtagcaaccgacacttcagattgaagat |
10768470 |
T |
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