View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1170_high_15 (Length: 329)
Name: NF1170_high_15
Description: NF1170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1170_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 30 - 260
Target Start/End: Original strand, 33259468 - 33259700
Alignment:
| Q |
30 |
aaaacatatactacgttctatattttccatgaataaattaggacaagttttcaatggaccggtgaaaaaccattgctaagtagtatcatcaattaagcaa |
129 |
Q |
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| T |
33259468 |
aaaacatatactacgttctatatttcccatgaataaattaggacaagatttgaatggaccggtgaaaaaccattgctaagtagtatcatcaattaagcaa |
33259567 |
T |
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| Q |
130 |
acaatttgcaagcaaacaa--taacaaagattctctcaactgatattccaacctcttttgatcatgttttgaatcttgaattattggaatccatagctgc |
227 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33259568 |
acaatttgcaagcaaacaaactaacaaagattctctcaactgatattccaacctcttttgatcatgttttgaatcttgaattattggaatccatagctgc |
33259667 |
T |
|
| Q |
228 |
cccacaaggcacatggttaacaactcccctatg |
260 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
33259668 |
cccacaaggcacatggttaacaactcccctatg |
33259700 |
T |
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