View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1170_high_28 (Length: 250)
Name: NF1170_high_28
Description: NF1170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1170_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 36112093 - 36111855
Alignment:
| Q |
1 |
gtatgaccttgctgctctgaaatattggggtcctgggactctcattaacttcccagtaagattattgcttgaatcgttttgtacttgatttggagatggt |
100 |
Q |
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| T |
36112093 |
gtatgaccttgctgctctgaaatattggggtcctgggactctcattaacttcccagtaagattattgcttgaatcgctttgcacttaatttggagatggt |
36111994 |
T |
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| Q |
101 |
ttggatttgttgccttaattaattgaaatgccatctggttttgtgatttgtgttttccttttgtttgatgaaaatggtggccactcacgccctacttcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
36111993 |
ttggatttgttgccttaattaattgaaatgccatctgtttttgtgatttgtgttttccttttgtttgatgaaaatggtggccactcacgtcctacttcat |
36111894 |
T |
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| Q |
201 |
atttttcatcaaaagattttttgtgaaatgactagaatt |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
36111893 |
atttttcatcaaaagattttttgtgaaatgactagaatt |
36111855 |
T |
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